NO09G01610, NO09G01610 (gene) Nannochloropsis oceanica | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	NO09G01610
Unique Name	NO09G01610
Type	gene
Organism	Nannochloropsis oceanica (N. oceanica IMET1)
Sequence length	3888
Alignment location	chr9:505833..509720 -

Link to JBrowse

Properties


Property Name	Value
Description	DNA repair protein REV1

Mutants

Expression

Analysis:

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Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr9	genome	chr9:505833..509720 -

Analyses

This gene is derived from or has results from the following analyses


Analysis Name	Date Performed
PRJNA769958	2024-08-13
GSE178672	2023-12-15
PRJNA933693	2023-10-26
PRJNA943449	2023-07-19
GSE149904	2020-10-10
NoIMET1_WT_HS	2020-09-29
GSE139615	2020-03-11
PRJNA241382	2020-03-11
BLASTP analysis of N. oceanica IMET1 genes	2019-07-11
InterPro analysis for N. oceanica IMET1 genes	2019-07-11
GO annotation for IMET1v2 genes	2019-07-10
PRJNA182180	2019-04-25
Gene prediction for N. oceanica IMET1	2017-10-24

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0003684	damaged DNA binding
GO:0016779	nucleotidyltransferase activity
GO:0016740	transferase activity
GO:0003684	damaged DNA binding
GO:0003677	DNA binding

Vocabulary: **Biological Process**
Term	Definition
GO:0006281	DNA repair
GO:0071897	DNA biosynthetic process
GO:0042276	error-prone translesion synthesis
GO:0006974	cellular response to DNA damage stimulus
GO:0006281	DNA repair

Vocabulary: **INTERPRO**
Term	Definition
IPR036775	DNA_pol_Y-fam_lit_finger_sf
IPR036420	BRCT_dom_sf
IPR017961	DNA_pol_Y-fam_little_finger
IPR001126	DNA_repair_prot_UmuC-like
IPR001357	BRCT_dom

Vocabulary: **Cellular Component**
Term	Definition
GO:0005634	nucleus

Homology

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BLAST of NO09G01610 vs. NCBI_GenBank
Match: EWM27548.1 (dna repair protein rev1 [Nannochloropsis gaditana])

HSP 1 Score: 986.5 bits (2549), Expect = 7.800e-284
Identity = 603/1283 (47.00%), Postives = 722/1283 (56.27%), Query Frame = 0

Query:    8 SNHKRPPPPVPQVGEHHGGSFGVYMSHKIQRLNEQLNERRGKDDVPASRIFEGMRFFVNGWTPLPVEELRALVHDHGGHIAAYETSDVTHMLCTNLPHAKLKQRRAQKLARGAHQQLPVIHPDYVQACVDKGRRLPPGDFLVDGVKHHHGQGIQSFMNQGKARDSDVGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRIVDINLLDIPAAVQETNETPPRLGTTQLTSSHHLQTAXXXXXXXSPYRPHLLHDVNNKCLKDKPLSSLAPLLPDGGKTTPTASPLPPQSSSPLKGLLDNKNDTITNAGGGGPLSTKD--DPNFLQKYFKSSRLHFIGSFRARMQDLAADHARKCRAARATANXXXXXXXXXXXPCRLIMHVDMDCYFVSALIRDLPHLTHQPVAVAHGEGLDRNNCSSSEISSCNYPARAKGVRAGMFIGEARKLCPGLKMLHYDFGVYEKVSHAMYQVFFEEEAAMVVQPVSCDEAYIELVPGTDPEEAARRVRRRLMEKTRCPASAGVGGNMLLARLATKQAKPSGHKVMLRLEEAMTYLQELPLREIPGVGLELGMKLDQKGLGTCGEMWRVSMPALQSWFGEKTGSMLYRASRGQDDREVIPKVARKSVGAEVNWGVRFEERGEVEVFVGKLAEEVAVRMREARVRGRHLTFKIKRSQYGPKEPEKLLGCGRCDNLSRSVGLARATDAGKEIGMVSLRLLRQLNVPPDLVRGVGIQLTKLVVEGGXXXXXXXXXXRIQTWLMK----SGVGCGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEDEIGDKEWQGWKKQSAKLPSTGQKAEGGKEGREEVHLS--LENYALPPPSQIDVSVLTALPPSMRTALELHLQQREQRQ-----------SLHEQHQAEEEGAAWSSLQHWDVTMSQIDDSTLRALPLDMQNEVRAVVRRKCPAXXXXXXXXXXXXXXXXXXRSCWFGSPENDIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQLKMHAYDHSGAQFKGLPAHDAAFLTNLPMPLRIETLADLERHKRMHITRDMTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQSMEYRTRLFVDEDVNDVRRALVEWLRNVRGSAGGSDGRKSLPQTAHLQLLAVYLLERVDEGSEDDVWTLMRSFRRWVTNEGHEAWRLAYRAVLGVLETRVAERERPQEERLQGWSVEGSAVVTGAIKWAGLQL 1272
            S+ K+ P P P VGE HGG FGVYM HKIQRL+ QLNE+ G++DVP SRIFEGM FF+NG+TPLPVEELRALVH+HGGH+AAYETS+VTH+LCTNLPHAKLKQRRAQKLARGAHQQLPVIHPDY+ A +++GRRLPP DFLVDGVK+HHGQGIQ+FM + +  D                                                             G  +  S+ H                              P   L   L   G    TA  +P  +                      P+S  D  DP+F++KYFKSSRLHFIGSFRARMQDLAA+HAR  RAARA  +             RLIMHVDMDCYFVSAL+RD P L  +PVAVAHGEG +R+  SSSEISSCNYPARA GVRAGMF+GEA++LCPGLK+LHYDF VYE+VS AMYQ+FFEE  A VVQPVSCDEAY+EL  GTDPE AARRVRRRLME TRCPASAGVG NMLLARLATK AKP+GH VML  EE+M YL+ LP+REIPGVG E   KL+++GL TCG++W V +P LQSW G KTGSMLYRA RGQDDR V+P+  RKSVGAEVNWGVRF +  +VEVFV +LA EVA R+ +A+V+ RHLTFKIKRSQYGP EPEKLLGCGRCDNLSRSV LAR TD   +I  VSLRLL QL VPP L+RG+GIQL+ L+V+G            +Q WL K    SGVG                                   E+E  +K      +   + P  G+    G E  E   LS  ++ + LPPPSQID+SVL  LP  MR  LE HL+Q+++RQ                          SSLQHWDV+MSQID++T +ALP ++Q+EVRA VRRK                          GS  +D                                                            Q+K+ AYD +G Q +GL   DAAFL  LP+ LR ETLA+L+RHKR ++                                                                   +  R RLFV ED++DVRRAL++WL  V G+    +G    P TAH+QLL+VYLLE +D+  + D WTLMRSFRRWV  +GH++W  AY A+L V+ETR++ERE  + E  Q    +  A     +KW GLQL
Sbjct:    2 SSAKKRPVPPPLVGEPHGGDFGVYMQHKIQRLHAQLNEKSGEEDVPISRIFEGMVFFINGFTPLPVEELRALVHEHGGHVAAYETSNVTHILCTNLPHAKLKQRRAQKLARGAHQQLPVIHPDYILASIEQGRRLPPADFLVDGVKYHHGQGIQAFMPR-RCGDG------------------------------------------------------------GARRAASALH-----------------------------GPALDLTTALATEG----TAFAVPADT----------------------PVSNDDAEDPDFIKKYFKSSRLHFIGSFRARMQDLAAEHARARRAARAVQSSEAGESNMRHCQRRLIMHVDMDCYFVSALVRDRPELAGKPVAVAHGEGQERH--SSSEISSCNYPARATGVRAGMFVGEAQRLCPGLKVLHYDFEVYERVSRAMYQIFFEE--AEVVQPVSCDEAYLELAAGTDPEAAARRVRRRLMEATRCPASAGVGRNMLLARLATKHAKPNGHHVMLGAEESMVYLENLPVREIPGVGWESDAKLERRGLRTCGQLWEVRLPQLQSWLGPKTGSMLYRACRGQDDRPVVPQTTRKSVGAEVNWGVRFSQEEQVEVFVDRLAVEVAQRLAQAKVQARHLTFKIKRSQYGPNEPEKLLGCGRCDNLSRSVALARPTDGPADIAAVSLRLLAQLQVPPALIRGLGIQLSNLLVDGQAGVPDKKGAGSMQAWLQKTDDLSGVG------SRGFEEDGCAVSASKQGQSKEPHDLVVVGEEEEAEKGGHDAWRIEEEGPCPGRIFAPGCEELEGDGLSTLVQEHDLPPPSQIDLSVLPELPSPMRLELEQHLRQQKERQXXXXXXXXXXXXXXXXXXXXXXXXXXSSLQHWDVSMSQIDETTFQALPRELQDEVRAAVRRK----------SFNMCRRNGVHLDTAGGSTNHD----------------------------AHGETAKGKASNAPGLTRATHSPSQRDRRAMRQMKIPAYDSNGLQLRGLSDQDAAFLAQLPVSLRTETLAELDRHKRTNV--------GLGSKEEDSNDSFLSSSSRSPRVPTRGHPCPTSGRHPKTVFEVEDEENDRSVPPTESPEVYGRPRLFVCEDIHDVRRALIDWLGRV-GTV--EEGVARPPATAHMQLLSVYLLELLDDDRDSDAWTLMRSFRRWVMQQGHQSWFPAYGAILKVVETRLSEREL-RYEYCQQEPFKRPARAMSNLKWGGLQL 1108

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BLAST of NO09G01610 vs. NCBI_GenBank
Match: XP_005852447.1 (DNA repair protein REV1, partial [Nannochloropsis gaditana CCMP526] >EKU23384.1 DNA repair protein REV1, partial [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 859.4 bits (2219), Expect = 1.400e-245
Identity = 465/779 (59.69%), Postives = 537/779 (68.93%), Query Frame = 0

Query:    8 SNHKRPPPPVPQVGEHHGGSFGVYMSHKIQRLNEQLNERRGKDDVPASRIFEGMRFFVNGWTPLPVEELRALVHDHGGHIAAYETSDVTHMLCTNLPHAKLKQRRAQKLARGAHQQLPVIHPDYVQACVDKGRRLPPGDFLVDGVKHHHGQGIQSFMNQ---------------GKARDSDVGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRIVDINLLDIPA-AVQETNETPPRLGTTQLTSSHHLQTAXXXXXXXSPYRPHLLHDVNNKCLKDKPLSSLAPLLPDGGKTTPTASPLPPQSS--SPLKGLLDNKNDTITNAGG---GGPLSTKDDPNFLQKYFKSSRLHFIGSFRARMQDLAADHARKCRAARATANXXXXXXXXXXXPCRLIMHVDMDCYFVSALIRDLPHLTHQPVAVAHGEGLDRNNCSSSEISSCNYPARAKGVRAGMFIGEARKLCPGLKMLHYDFGVYEKVSHAMYQVFFEEEAAMVVQPVSCDEAYIELVPGTDPEEAARRVRRRLMEKTRCPASAGVGGNMLLARLATKQAKPSGHKVMLRLEEAMTYLQELPLREIPGVGLELGMKLDQKGLGTCGEMWRVSMPALQSWFGEKTGSMLYRASRGQDDREVIPKVARKSVGAEVNWGVRFEERGEVEVFVGKLAEEVAVRMREARVRGRHLTFKIKRSQYGPKEPEKLLGCGRCDNLSRSVGLARATDAGKEIGMVSLRLLRQLNVPPDLVRGVGIQLTKLVVEGGXXXXXXXXXXRIQTWLMKS 766
            S+ K+ P P P VGE HGG FGVYM HKIQRL+ QLNE+ G++DVP SRIFEGM FF+NG+TPLPVEELRALVH+HGGH+AAYETS+VTH+LCTNLPHAKLKQRRAQKLARGAHQQLPVIHPDY+ A +++GRRLPP DFLVDGVK+HHGQGIQ+FM +               G A D                                     R   +  +   A AV+ET++TPPR                       PY            L     +S +PL P          PLP  S+           + D   NA G   GG LSTK+DP+F++KYFKSSRLHFIGSFRARMQDLAA+HAR  RAARA  +             RLIMHVDMDCYFVSAL+RD P L  +PVAVAHGEG +R+  SSSEISSCNYPARA GVRAGMF+GEA++LCPGLK+LHYDF VYE+VS AMYQ+FFEE  A VVQPVSCDEAY+EL  GTDPE AARRVRRRLME TRCPASAGVG NMLLARLATK AKP+GH VML  EE+M YL+ LP+REIPGVG E   KL+++GL TCG++W V +P LQSW G KTGSMLYRA RGQDDR V+P+  RKSVGAEVNWGVRF +  +VEVFV +LA EVA R+ +A+V+ RHLTFKIKRSQYGP EPEKLLGCGRCDNLSRSV LAR TD   +I  VSLRLL QL VPP L+RG+GIQL+ L+V+G            +Q WL K+
Sbjct:    2 SSAKKRPVPPPLVGEPHGGDFGVYMQHKIQRLHAQLNEKSGEEDVPISRIFEGMVFFINGFTPLPVEELRALVHEHGGHVAAYETSNVTHILCTNLPHAKLKQRRAQKLARGAHQQLPVIHPDYILASIEQGRRLPPADFLVDGVKYHHGQGIQAFMPRRCGDGGARRAASALHGPALDLTTALATEGTAFAVPADTPVSNDDAGWNASEAHQELERATVLGPVSPAATAVEETSQTPPRSXXXXXXXXXXTALPHREERMTPPYH----------TLAGGSKASWSPLSP----------PLPSPSTXXXXXXXXTGRRADGGQNAAGSVTGGLLSTKEDPDFIKKYFKSSRLHFIGSFRARMQDLAAEHARARRAARAVQSSEAGESNMRHCQRRLIMHVDMDCYFVSALVRDRPELAGKPVAVAHGEGQERH--SSSEISSCNYPARATGVRAGMFVGEAQRLCPGLKVLHYDFEVYERVSRAMYQIFFEE--AEVVQPVSCDEAYLELAAGTDPEAAARRVRRRLMEATRCPASAGVGRNMLLARLATKHAKPNGHHVMLGAEESMVYLENLPVREIPGVGWESDAKLERRGLRTCGQLWEVRLPQLQSWLGPKTGSMLYRACRGQDDRPVVPQTTRKSVGAEVNWGVRFSQEEQVEVFVDRLAVEVAQRLAQAKVQARHLTFKIKRSQYGPNEPEKLLGCGRCDNLSRSVALARPTDGPADIAAVSLRLLAQLQVPPALIRGLGIQLSNLLVDGQAGVPDKKGAGSMQAWLQKT 756

[Close]

BLAST of NO09G01610 vs. NCBI_GenBank
Match: OWZ24483.1 (DNA repair protein [Phytophthora megakarya])

HSP 1 Score: 373.2 bits (957), Expect = 3.100e-99
Identity = 260/728 (35.71%), Postives = 370/728 (50.82%), Query Frame = 0

Query:   19 QVGEHHGGSFGVYMSHKIQRLNEQLNERRGKDDVPASRIFEGMRFFVNGWTPLPVEELRALVHDHGGHIAAYETSDVTHMLCTNLPHAKLKQRRAQKLARGAHQQLPVIHPDYVQACVDKGRRLPPGDFLVDGVKHHHGQGIQSF-MNQGKARDSDVGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRIVDINLLDIPAAVQETNETPPRLGTTQLTSSHHLQTAXXXXXXXSPYRPHLLHDVNNKCLKDKPLSSLAPLLPDGGKTTPTASPLPPQSSSPLKGLLDNKNDTITNAGGGGPLSTKDDPNFLQKYFKSSRLHFIGSFRARMQDLAADHARKCRAARATANXXXXXXXXXXXPCRLIMHVDMDCYFVSALIRDLPHLTHQPVAVAHGEGLDRNNCSSSEISSCNYPARAKGVRAGMFIGEARKLCPGLKMLHYDFGVYEKVSHAMYQVFFEEEAAMVVQPVSCDEAYIELVPGTDPEEAARRVRRRLMEKTRCPASAGVGGNMLLARLATKQAKPSGHKVMLRLEEAMTYLQELPLREIPGVGLELGMKLDQKGLGTCGEMWRVSMPALQSWFGEKTGSMLYRASRGQDDR--EVIPKVARKSVGAEVNWGVRFEERGEVEVFVGKLAEEVAVRMREARVRGRHLTFKI-KRSQYGPKEPEKLLGCGRCDNLSRSVGLARATDAGKEIGMVSLRLLRQLNVPPDLVRGVGIQLTKLV 743
            +VGEHH GSFGVYMSHKIQ+L  Q       + V  S +F+ +  +V+G+T    EE+R L+  HGG    YET+ VTH++ T+LP +KL Q +  K      + LPV+HPD++   V++ + LP   FL  G      + I S  ++ GK                                                D P  V+           T+  + H  + +             +L + ++  L+D P+S LA               +   +SS L+          TN       STKD P F++ +F  SRLH IG++R   Q  AA+   K + A  T               R+I+HVDMDC+FV+  +R    L   PVAVAH       N  SSEISSCNY ARAKGV AGMF+  A++LCP L +L Y F   E+VS  +Y +FF       VQ VSCDEA++E   GT+  E A+ +R+ + E+T CPAS GV  N+LLA+L++K+AKP G   +    +A  ++  L +R++PGVG + G+K +  G+    ++   S   L    G+  G MLY  +RG D R   +   + RKSV A VN+G+RFE   +  VF+  L EE++ R+R  +V+ + LT  I KR++  P EP K +G G CDN S+S  LA+ TD    IG V + LLRQ+N P + +RGVG+Q TKLV
Sbjct:   12 RVGEHHDGSFGVYMSHKIQKLRGQNESFASPNGV--SALFQNVHVYVDGYTIPSKEEIRQLMLLHGGGFEHYETNRVTHVIATHLPASKLLQLKKAK------KPLPVVHPDWIVQSVEQKKLLPLQSFLYAGFADPTQESIFSLSLSSGK------------------------------------------------DSPVVVE-----------TKRAADHASKHSDMEIEELD-----ILAEEDDSDLEDPPVSLLA--------------EMNNAASSKLR----------TN-------STKDGPEFVRHFFAKSRLHHIGTWRTTFQQKAAEFQAKYKGAPVTRAPVKSSD-------RVILHVDMDCFFVAVAVRGRNELEKVPVAVAHS-----GNAGSSEISSCNYMARAKGVGAGMFMQTAKELCPELVVLPYQFDAIERVSFQIYDIFFSH--TPYVQAVSCDEAFLEFGKGTNGLEMAKSIRQEIFEQTGCPASVGVSFNVLLAKLSSKKAKPDGIYQIADPSQAEEFVLSLKIRDLPGVGYKTGVKFEALGVEDVCQLVLKSKGELVQALGKVAGEMLYNYARGIDTRRLSMASNMMRKSVSAVVNFGIRFENWEDATVFLIALGEELSHRLRNLKVQAKCLTLLIKKRAEGAPIEPSKFMGHGICDNFSKSQVLAQPTDDEVVIGKVCIELLRQMNFPSEELRGVGVQATKLV 622

[Close]

BLAST of NO09G01610 vs. NCBI_GenBank
Match: XP_024526731.1 (DNA repair protein REV1 isoform X1 [Selaginella moellendorffii])

HSP 1 Score: 364.4 bits (934), Expect = 1.400e-96
Identity = 249/753 (33.07%), Postives = 372/753 (49.40%), Query Frame = 0

Query:   26 GSFGVYMSHKIQRLNEQLNERRGKDDVP------------ASRIFEGMRFFVNGWTPLPVEELRALVHDHGGHIAAY-ETSDVTHMLCTNLPHAKLKQRRAQKLARGAHQQLPVIHPDYVQACVDKGRRLPPGDFLVDGVKHHHGQGIQSFMNQGKARDSDVGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRIVDINLLDIPAAVQETNETPPRLGTTQLTSSHHLQTAXXXXXXXSPYRPHLLHDVNNKCLKDKPLSSLAPLLPDGGKTTPTASPLPPQSSSPLKGLLDNKNDTITNAGGGGPLSTKDDPNFLQKYFKSSRLHFIGSFRARMQDLAADHARKCRAARATANXXXXXXXXXXXPCRLIMHVDMDCYFVSALIRDLPHLTHQPVAVAHGEGLDRNNCSSSEISSCNYPARAKGVRAGMFIGEARKLCPGLKMLHYDFGVYEKVSHAMYQVFFEEEAAMVVQPVSCDEAYIELVPGTDPEEAARRVRRRLMEKTRCPASAGVGGNMLLARLATKQAKPSGHKVMLRLEEAMTYLQELPLREIPGVGLELGMKLDQKGLGTCGEMWRVSMPALQSWFGEKTGSMLYRASRGQDDREVIPKVARKSVGAEVNWGVRFEERGEVEVFVGKLAEEVAVRMREARVRGRHLTFKIKRSQYGPKEPEKLLGCGRCDNLSRSVGLARATDAGKEIGMVSLRLLRQLNVPPDLVRGVGIQLTKLVVEGGXXXXXXXXXXRIQTWLMKS 766
            G FG YM++K+++L EQ        + P             S+IFEG+   VNG+T    +ELR L+  HGG+   Y   + VTH++C+NLP +K+K+ R+   ++G    LPV+ P ++   +  G+ LP   + ++ + + +   + SF    K                                                       E  E    +   +  +SH                 +L  D   K ++            +GG           +  +   GL +N+      +      ST DDPNF+Q YFK SRLHFIG++R R Q      A      R T +             + I+HVDMDC+FVS + R+ P L  +PV V H +    ++  + EISS NY AR  GV+AGMF+  A+K CP L+++ YDF  YE+V+  +Y++      + +VQ +SCDEAY+++    DP   A  +RR + E TRC ASAG+  N+LLARLATK+AKP+G +  + L+EA  ++  LP+ E+PGVG  L  KL    L TC ++  ++   L+  FG KTG  LY  +RG D R+V     +KS+GAEVNWGVRF    + + F+  L+EEVA R+R+A V GR  T K+K+ + G  EPEK +GCG CDN+SRS  L   T++   +  +S +L   LN+    VRGVG+Q+T+L  E            R+++W+  S
Sbjct:   41 GDFGRYMTNKVRKLGEQFQAEASNPEAPRGNADEKSIEEITSKIFEGISIHVNGFTIPSHQELRTLMLRHGGNFENYFSKTRVTHIICSNLPQSKIKEFRS--FSKG----LPVLKPGWIVDSIAVGKLLPWASYQLEAI-YSNQSTLSSFYGTLKLLQDGT-------------------------------------------------ENVEEQELVAEAKADTSHQ----------------NLAGDGAGKEIEYDEQDE------EGG----------AEEVNVEDGLSENEYMEHRRSH-----STLDDPNFVQNYFKYSRLHFIGTWRNRYQ------ATVQMQRRVTLDPALE---------KSIIHVDMDCFFVSVVTRNRPELDGKPVGVCHSD----SSKGTGEISSANYEARTFGVKAGMFVKTAKKCCPNLEIVSYDFEGYEQVADKLYEILHRH--SPLVQAISCDEAYLDVSGMGDPASIASAIRREIFEATRCTASAGISANILLARLATKKAKPNG-QFQIHLQEAEEFMMNLPVEELPGVGWVLREKLHALKLFTCSDLRLLTSETLRKHFGAKTGETLYNHARGIDHRKVQAPQEKKSIGAEVNWGVRFSTPADAQNFLVTLSEEVASRLRKAAVHGRTFTMKVKKRKTGAGEPEKFMGCGICDNISRSTTLPSGTNSSDVLSRISRQLFGSLNLDVRDVRGVGLQVTRL--EDLSNEQGAKEQTRLESWITNS 676

[Close]

BLAST of NO09G01610 vs. NCBI_GenBank
Match: XP_024526733.1 (DNA repair protein REV1 isoform X3 [Selaginella moellendorffii])

HSP 1 Score: 364.4 bits (934), Expect = 1.400e-96
Identity = 249/753 (33.07%), Postives = 372/753 (49.40%), Query Frame = 0

Query:   26 GSFGVYMSHKIQRLNEQLNERRGKDDVP------------ASRIFEGMRFFVNGWTPLPVEELRALVHDHGGHIAAY-ETSDVTHMLCTNLPHAKLKQRRAQKLARGAHQQLPVIHPDYVQACVDKGRRLPPGDFLVDGVKHHHGQGIQSFMNQGKARDSDVGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRIVDINLLDIPAAVQETNETPPRLGTTQLTSSHHLQTAXXXXXXXSPYRPHLLHDVNNKCLKDKPLSSLAPLLPDGGKTTPTASPLPPQSSSPLKGLLDNKNDTITNAGGGGPLSTKDDPNFLQKYFKSSRLHFIGSFRARMQDLAADHARKCRAARATANXXXXXXXXXXXPCRLIMHVDMDCYFVSALIRDLPHLTHQPVAVAHGEGLDRNNCSSSEISSCNYPARAKGVRAGMFIGEARKLCPGLKMLHYDFGVYEKVSHAMYQVFFEEEAAMVVQPVSCDEAYIELVPGTDPEEAARRVRRRLMEKTRCPASAGVGGNMLLARLATKQAKPSGHKVMLRLEEAMTYLQELPLREIPGVGLELGMKLDQKGLGTCGEMWRVSMPALQSWFGEKTGSMLYRASRGQDDREVIPKVARKSVGAEVNWGVRFEERGEVEVFVGKLAEEVAVRMREARVRGRHLTFKIKRSQYGPKEPEKLLGCGRCDNLSRSVGLARATDAGKEIGMVSLRLLRQLNVPPDLVRGVGIQLTKLVVEGGXXXXXXXXXXRIQTWLMKS 766
            G FG YM++K+++L EQ        + P             S+IFEG+   VNG+T    +ELR L+  HGG+   Y   + VTH++C+NLP +K+K+ R+   ++G    LPV+ P ++   +  G+ LP   + ++ + + +   + SF    K                                                       E  E    +   +  +SH                 +L  D   K ++            +GG           +  +   GL +N+      +      ST DDPNF+Q YFK SRLHFIG++R R Q      A      R T +             + I+HVDMDC+FVS + R+ P L  +PV V H +    ++  + EISS NY AR  GV+AGMF+  A+K CP L+++ YDF  YE+V+  +Y++      + +VQ +SCDEAY+++    DP   A  +RR + E TRC ASAG+  N+LLARLATK+AKP+G +  + L+EA  ++  LP+ E+PGVG  L  KL    L TC ++  ++   L+  FG KTG  LY  +RG D R+V     +KS+GAEVNWGVRF    + + F+  L+EEVA R+R+A V GR  T K+K+ + G  EPEK +GCG CDN+SRS  L   T++   +  +S +L   LN+    VRGVG+Q+T+L  E            R+++W+  S
Sbjct:   41 GDFGRYMTNKVRKLGEQFQAEASNPEAPRGNADEKSIEEITSKIFEGISIHVNGFTIPSHQELRTLMLRHGGNFENYFSKTRVTHIICSNLPQSKIKEFRS--FSKG----LPVLKPGWIVDSIAVGKLLPWASYQLEAI-YSNQSTLSSFYGTLKLLQDGT-------------------------------------------------ENVEEQELVAEAKADTSHQ----------------NLAGDGAGKEIEYDEQDE------EGG----------AEEVNVEDGLSENEYMEHRRSH-----STLDDPNFVQNYFKYSRLHFIGTWRNRYQ------ATVQMQRRVTLDPALE---------KSIIHVDMDCFFVSVVTRNRPELDGKPVGVCHSD----SSKGTGEISSANYEARTFGVKAGMFVKTAKKCCPNLEIVSYDFEGYEQVADKLYEILHRH--SPLVQAISCDEAYLDVSGMGDPASIASAIRREIFEATRCTASAGISANILLARLATKKAKPNG-QFQIHLQEAEEFMMNLPVEELPGVGWVLREKLHALKLFTCSDLRLLTSETLRKHFGAKTGETLYNHARGIDHRKVQAPQEKKSIGAEVNWGVRFSTPADAQNFLVTLSEEVASRLRKAAVHGRTFTMKVKKRKTGAGEPEKFMGCGICDNISRSTTLPSGTNSSDVLSRISRQLFGSLNLDVRDVRGVGLQVTRL--EDLSNEQGAKEQTRLESWITNS 676

[Close]

BLAST of NO09G01610 vs. NCBI_GenBank
Match: XP_009533420.1 (hypothetical protein PHYSODRAFT_317799 [Phytophthora sojae] >EGZ10675.1 hypothetical protein PHYSODRAFT_317799 [Phytophthora sojae])

HSP 1 Score: 363.6 bits (932), Expect = 2.500e-96
Identity = 262/757 (34.61%), Postives = 368/757 (48.61%), Query Frame = 0

Query:   19 QVGEHHGGSFGVYMSHKIQRLNEQLNERRG--KDDVPASRIFEGMRFFVNGWTPLPVEELRALVHDHGGHIAAYETSDVTHMLCTNLPHAKLKQRRAQKLARGAHQQLPVIHPDYVQACVDKGRRLPPGDFLVDGVKHHHGQGIQSFMNQGKARDSDVGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRIVDINLLDIPAAVQETNETPPRLGTTQLTSSHHLQTAXXXXXXXSPYRPHLLHDVNNKCLKDKPLSSLAPLLPDGGKTTPTASPLPPQSSSPLKGLLDNKNDTITNAGGGGPLSTKDDPNFLQKYFKSSRLHFIGSFRARMQDLAADHARKCRAARATANXXXXXXXXXXXPCRLIMHVDMDCYFVSALIRDLPHLTHQPVAVAHGEGLDRNNCSSSEISSCNYPARAKGVRAGMFIGEARKLCPGLKMLHYDFGVYEKVSHAMYQVFFEEEAAMVVQPVSCDEAYIELVPGTDPEEAARRVRRRLMEKTRCPASAGVGGNMLLARLATKQAKPSGHKVMLRLEEAMTYLQELPLREIPGVGLELGMKLDQKGLGTCGEMWRVSMPALQSWFGEKTGSMLYRASRGQDDR--EVIPKVARKSVGAEVNWGVRFEERGEVEVFVGKLAEEVAVRMREARVRGRHLTFKIKRSQYG-PKEPEKLLGCGRCDNLSRSVGLARATDAGKEIGMVSLRLLRQLNVPPDLVRGVGIQLTKLVVEGGXXXXXXXXXXRIQTWLMKSGVGCG 771
            +VGEHHGGSFGVYMSHKIQ+L  Q     G  + D  ++ +F G+  +V+G+T    EE+R L+  HGG    Y+T  VTH++ T+LP +KL Q       + A + LPV+ PD++   +++ + LP   FL  G        I S      A  + V                                          D PA   E  +                   XXXXXXX                         P LP            P Q+++    L  N              ST+D P F++ +F  SRLH IG++RA  Q  AA+   K +    T               R+I+HVDMDC+FV+  +R  P L   PVAVAH       N  SSEISSC+Y ARAKGV AGMF+  A++LCP L +L Y F   ++VS  +Y +FF       VQ VSCDEA++E   GT+  E A+ +R+++ E+T CPAS GV  N+LL +L +K+AKP G   +    +A  ++  L + ++PGVG + G KLD  G+   G++  ++   L    G+ +G ML+  +RG D R   +   + RKSV A VN+G+RFE+  +  VF+  L EE++ R+R  +VR + LT  IK+ + G P EP K +G G CDN S+S  L+ ATD    IG   + LLRQ N P + +RGVG+Q TKLV +              + WL  SG   G
Sbjct:   13 RVGEHHGGSFGVYMSHKIQKLRNQNESAAGAAEADSDSAGLFRGVHVYVDGYTVPSKEEIRRLMLLHGGGFEHYDTGRVTHIIATHLPASKLLQ------LKRARRPLPVVRPDWIVQSIEQHKLLPVQPFLYAGFADPTQSSIFSLSGSMSASSTKVA-----------------------------------------DSPAV--ELEDKRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPPALP------------PVQNATSTTKLRTN--------------STRDGPEFVRHFFAKSRLHHIGTWRATFQQKAAEFQAKYKGGPVTRAPASSSD-------RVILHVDMDCFFVAVAVRGRPELQKVPVAVAHS-----GNAGSSEISSCSYLARAKGVGAGMFMQTAKELCPELVVLPYQFDAIQRVSFQIYDIFFSH--TPYVQAVSCDEAFLEFGKGTNGMEKAKTIRQQIFEQTGCPASVGVSFNVLLTKLCSKKAKPDGIYQIEDRGQAEEFMLSLKVSDLPGVGYKTGAKLDDMGVEDVGQVISMTKGELVRSLGKASGEMLFNYARGIDLRPLSMESNMMRKSVSAVVNFGIRFEKWEDATVFLMALGEELSHRLRNLKVRTKCLTLLIKKRREGAPIEPSKFMGHGVCDNFSKSQVLSLATDDEVVIGKACIELLRQFNFPSEELRGVGVQATKLVSDAPGVNQKSGQF--FKAWLKDSGQQAG 678

[Close]

BLAST of NO09G01610 vs. NCBI_GenBank
Match: XP_024543049.1 (DNA repair protein REV1 isoform X1 [Selaginella moellendorffii])

HSP 1 Score: 363.6 bits (932), Expect = 2.500e-96
Identity = 252/753 (33.47%), Postives = 373/753 (49.54%), Query Frame = 0

Query:   26 GSFGVYMSHKIQRLNEQLNER-------RGKDD-----VPASRIFEGMRFFVNGWTPLPVEELRALVHDHGGHIAAY-ETSDVTHMLCTNLPHAKLKQRRAQKLARGAHQQLPVIHPDYVQACVDKGRRLPPGDFLVDGVKHHHGQGIQSFMNQGKARDSDVGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRIVDINLLDIPAAVQETNETPPRLGTTQLTSSHHLQTAXXXXXXXSPYRPHLLHDVNNKCLKDKPLSSLAPLLPDGGKTTPTASPLPPQSSSPLKGLLDNKNDTITNAGGGGPLSTKDDPNFLQKYFKSSRLHFIGSFRARMQDLAADHARKCRAARATANXXXXXXXXXXXPCRLIMHVDMDCYFVSALIRDLPHLTHQPVAVAHGEGLDRNNCSSSEISSCNYPARAKGVRAGMFIGEARKLCPGLKMLHYDFGVYEKVSHAMYQVFFEEEAAMVVQPVSCDEAYIELVPGTDPEEAARRVRRRLMEKTRCPASAGVGGNMLLARLATKQAKPSGHKVMLRLEEAMTYLQELPLREIPGVGLELGMKLDQKGLGTCGEMWRVSMPALQSWFGEKTGSMLYRASRGQDDREVIPKVARKSVGAEVNWGVRFEERGEVEVFVGKLAEEVAVRMREARVRGRHLTFKIKRSQYGPKEPEKLLGCGRCDNLSRSVGLARATDAGKEIGMVSLRLLRQLNVPPDLVRGVGIQLTKLVVEGGXXXXXXXXXXRIQTWLMKS 766
            G FG YM++K+++L EQ           RG  D        S+IFEG+   VNG+T    +ELR L+  HGG    Y   + VTH++C+NLP +K+K+ R+   ++G    LPV+ P ++   +  G+ LP   + ++ + + +   + SF    K                                                       E  E    +   +  +SH                P+L  D   K ++            +GG           +  +   GL +N+      +      ST DDPNF+Q YFK SRLHFIG++R R Q      A      R T +             + I+HVDMDC+FVS + R+ P L  +PV V H +    ++  + EISS NY AR  GV+AGMF+  A+K CP L+++ YDF  YE+V+  +Y++      + +VQ +SCDEAY+++    DP   A  +RR + E TRC ASAG+  N+LLARLATK+AKP+G +  + L+EA  ++  LP+ E+PGVG  L  KL    L TC ++  ++   L+  FG KTG  LY  +RG D R+V     +KS+GAEVNWGVRF    + + F+  L+EEVA R+R+A V GR  T K+K+ + G  EPEK +GCG CDN+SRS  L   T++   +  +S +L   LN+    VRGVG+Q+T+L  E            R+++W+  S
Sbjct:   41 GDFGRYMTNKVRKLGEQFQAEASNPEASRGNADENSIEETTSKIFEGISIHVNGFTIPSHQELRTLMLRHGGTFENYFSKTRVTHIICSNLPQSKIKEFRS--FSKG----LPVLKPGWIVDSIAVGKLLPWASYQLEAI-YSNQSTLSSFYGTRKLLQDGT-------------------------------------------------ENVEEQELVAEAKPDTSH----------------PNLAGDGAGKEIEYDEQDE------EGG----------AEEVNVEDGLSENEYMEHRRSH-----STLDDPNFVQNYFKYSRLHFIGTWRNRYQ------ATVQMQRRVTLDPALE---------KSIIHVDMDCFFVSVVTRNRPELDGKPVGVCHSD----SSKGTGEISSANYEARTFGVKAGMFVKTAKKCCPNLEIVSYDFEGYEQVADKLYEILHRH--SPLVQAISCDEAYLDVSGMGDPASIASAIRREIFEATRCTASAGISANILLARLATKKAKPNG-QFQIHLQEAEEFMMNLPVEELPGVGWVLREKLHALKLFTCSDLRLLTSETLRKHFGAKTGETLYNHARGIDHRKVQAPQEKKSIGAEVNWGVRFSTLADAQNFLVTLSEEVASRLRKAAVHGRTFTMKVKKRKSGAGEPEKFMGCGICDNISRSTTLPSGTNSSDVLSRISRQLFGSLNLDVRDVRGVGLQVTRL--EDLSNEQGAKEQTRLESWITNS 676

[Close]

BLAST of NO09G01610 vs. NCBI_GenBank
Match: XP_024543052.1 (DNA repair protein REV1 isoform X3 [Selaginella moellendorffii])

HSP 1 Score: 363.6 bits (932), Expect = 2.500e-96
Identity = 252/753 (33.47%), Postives = 373/753 (49.54%), Query Frame = 0

Query:   26 GSFGVYMSHKIQRLNEQLNER-------RGKDD-----VPASRIFEGMRFFVNGWTPLPVEELRALVHDHGGHIAAY-ETSDVTHMLCTNLPHAKLKQRRAQKLARGAHQQLPVIHPDYVQACVDKGRRLPPGDFLVDGVKHHHGQGIQSFMNQGKARDSDVGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRIVDINLLDIPAAVQETNETPPRLGTTQLTSSHHLQTAXXXXXXXSPYRPHLLHDVNNKCLKDKPLSSLAPLLPDGGKTTPTASPLPPQSSSPLKGLLDNKNDTITNAGGGGPLSTKDDPNFLQKYFKSSRLHFIGSFRARMQDLAADHARKCRAARATANXXXXXXXXXXXPCRLIMHVDMDCYFVSALIRDLPHLTHQPVAVAHGEGLDRNNCSSSEISSCNYPARAKGVRAGMFIGEARKLCPGLKMLHYDFGVYEKVSHAMYQVFFEEEAAMVVQPVSCDEAYIELVPGTDPEEAARRVRRRLMEKTRCPASAGVGGNMLLARLATKQAKPSGHKVMLRLEEAMTYLQELPLREIPGVGLELGMKLDQKGLGTCGEMWRVSMPALQSWFGEKTGSMLYRASRGQDDREVIPKVARKSVGAEVNWGVRFEERGEVEVFVGKLAEEVAVRMREARVRGRHLTFKIKRSQYGPKEPEKLLGCGRCDNLSRSVGLARATDAGKEIGMVSLRLLRQLNVPPDLVRGVGIQLTKLVVEGGXXXXXXXXXXRIQTWLMKS 766
            G FG YM++K+++L EQ           RG  D        S+IFEG+   VNG+T    +ELR L+  HGG    Y   + VTH++C+NLP +K+K+ R+   ++G    LPV+ P ++   +  G+ LP   + ++ + + +   + SF    K                                                       E  E    +   +  +SH                P+L  D   K ++            +GG           +  +   GL +N+      +      ST DDPNF+Q YFK SRLHFIG++R R Q      A      R T +             + I+HVDMDC+FVS + R+ P L  +PV V H +    ++  + EISS NY AR  GV+AGMF+  A+K CP L+++ YDF  YE+V+  +Y++      + +VQ +SCDEAY+++    DP   A  +RR + E TRC ASAG+  N+LLARLATK+AKP+G +  + L+EA  ++  LP+ E+PGVG  L  KL    L TC ++  ++   L+  FG KTG  LY  +RG D R+V     +KS+GAEVNWGVRF    + + F+  L+EEVA R+R+A V GR  T K+K+ + G  EPEK +GCG CDN+SRS  L   T++   +  +S +L   LN+    VRGVG+Q+T+L  E            R+++W+  S
Sbjct:   41 GDFGRYMTNKVRKLGEQFQAEASNPEASRGNADENSIEETTSKIFEGISIHVNGFTIPSHQELRTLMLRHGGTFENYFSKTRVTHIICSNLPQSKIKEFRS--FSKG----LPVLKPGWIVDSIAVGKLLPWASYQLEAI-YSNQSTLSSFYGTRKLLQDGT-------------------------------------------------ENVEEQELVAEAKPDTSH----------------PNLAGDGAGKEIEYDEQDE------EGG----------AEEVNVEDGLSENEYMEHRRSH-----STLDDPNFVQNYFKYSRLHFIGTWRNRYQ------ATVQMQRRVTLDPALE---------KSIIHVDMDCFFVSVVTRNRPELDGKPVGVCHSD----SSKGTGEISSANYEARTFGVKAGMFVKTAKKCCPNLEIVSYDFEGYEQVADKLYEILHRH--SPLVQAISCDEAYLDVSGMGDPASIASAIRREIFEATRCTASAGISANILLARLATKKAKPNG-QFQIHLQEAEEFMMNLPVEELPGVGWVLREKLHALKLFTCSDLRLLTSETLRKHFGAKTGETLYNHARGIDHRKVQAPQEKKSIGAEVNWGVRFSTLADAQNFLVTLSEEVASRLRKAAVHGRTFTMKVKKRKSGAGEPEKFMGCGICDNISRSTTLPSGTNSSDVLSRISRQLFGSLNLDVRDVRGVGLQVTRL--EDLSNEQGAKEQTRLESWITNS 676

[Close]

BLAST of NO09G01610 vs. NCBI_GenBank
Match: XP_024526732.1 (DNA repair protein REV1 isoform X2 [Selaginella moellendorffii])

HSP 1 Score: 362.1 bits (928), Expect = 7.200e-96
Identity = 245/729 (33.61%), Postives = 364/729 (49.93%), Query Frame = 0

Query:   26 GSFGVYMSHKIQRLNEQLNERRGKDDVP------------ASRIFEGMRFFVNGWTPLPVEELRALVHDHGGHIAAY-ETSDVTHMLCTNLPHAKLKQRRAQKLARGAHQQLPVIHPDYVQACVDKGRRLPPGDFLVDGVKHHHGQGIQSFMNQGKARDSDVGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRIVDINLLDIPAAVQETNETPPRLGTTQLTSSHHLQTAXXXXXXXSPYRPHLLHDVNNKCLKDKPLSSLAPLLPDGGKTTPTASPLPPQSSSPLKGLLDNKNDTITNAGGGGPLSTKDDPNFLQKYFKSSRLHFIGSFRARMQDLAADHARKCRAARATANXXXXXXXXXXXPCRLIMHVDMDCYFVSALIRDLPHLTHQPVAVAHGEGLDRNNCSSSEISSCNYPARAKGVRAGMFIGEARKLCPGLKMLHYDFGVYEKVSHAMYQVFFEEEAAMVVQPVSCDEAYIELVPGTDPEEAARRVRRRLMEKTRCPASAGVGGNMLLARLATKQAKPSGHKVMLRLEEAMTYLQELPLREIPGVGLELGMKLDQKGLGTCGEMWRVSMPALQSWFGEKTGSMLYRASRGQDDREVIPKVARKSVGAEVNWGVRFEERGEVEVFVGKLAEEVAVRMREARVRGRHLTFKIKRSQYGPKEPEKLLGCGRCDNLSRSVGLARATDAGKEIGMVSLRLLRQLNVPPDLVRGVGIQLTKL 742
            G FG YM++K+++L EQ        + P             S+IFEG+   VNG+T    +ELR L+  HGG+   Y   + VTH++C+NLP +K+K+ R+   ++G    LPV+ P ++   +  G+ LP   + ++ + + +   + SF    K                                                       E  E    +   +  +SH                 +L  D   K ++            +GG           +  +   GL +N+      +      ST DDPNF+Q YFK SRLHFIG++R R Q      A      R T +             + I+HVDMDC+FVS + R+ P L  +PV V H +    ++  + EISS NY AR  GV+AGMF+  A+K CP L+++ YDF  YE+V+  +Y++      + +VQ +SCDEAY+++    DP   A  +RR + E TRC ASAG+  N+LLARLATK+AKP+G +  + L+EA  ++  LP+ E+PGVG  L  KL    L TC ++  ++   L+  FG KTG  LY  +RG D R+V     +KS+GAEVNWGVRF    + + F+  L+EEVA R+R+A V GR  T K+K+ + G  EPEK +GCG CDN+SRS  L   T++   +  +S +L   LN+    VRGVG+Q+T+L
Sbjct:   41 GDFGRYMTNKVRKLGEQFQAEASNPEAPRGNADEKSIEEITSKIFEGISIHVNGFTIPSHQELRTLMLRHGGNFENYFSKTRVTHIICSNLPQSKIKEFRS--FSKG----LPVLKPGWIVDSIAVGKLLPWASYQLEAI-YSNQSTLSSFYGTLKLLQDGT-------------------------------------------------ENVEEQELVAEAKADTSHQ----------------NLAGDGAGKEIEYDEQDE------EGG----------AEEVNVEDGLSENEYMEHRRSH-----STLDDPNFVQNYFKYSRLHFIGTWRNRYQ------ATVQMQRRVTLDPALE---------KSIIHVDMDCFFVSVVTRNRPELDGKPVGVCHSD----SSKGTGEISSANYEARTFGVKAGMFVKTAKKCCPNLEIVSYDFEGYEQVADKLYEILHRH--SPLVQAISCDEAYLDVSGMGDPASIASAIRREIFEATRCTASAGISANILLARLATKKAKPNG-QFQIHLQEAEEFMMNLPVEELPGVGWVLREKLHALKLFTCSDLRLLTSETLRKHFGAKTGETLYNHARGIDHRKVQAPQEKKSIGAEVNWGVRFSTPADAQNFLVTLSEEVASRLRKAAVHGRTFTMKVKKRKTGAGEPEKFMGCGICDNISRSTTLPSGTNSSDVLSRISRQLFGSLNLDVRDVRGVGLQVTRL 654

[Close]

BLAST of NO09G01610 vs. NCBI_GenBank
Match: XP_024543050.1 (DNA repair protein REV1 isoform X2 [Selaginella moellendorffii])

HSP 1 Score: 361.7 bits (927), Expect = 9.400e-96
Identity = 248/729 (34.02%), Postives = 365/729 (50.07%), Query Frame = 0

Query:   26 GSFGVYMSHKIQRLNEQLNER-------RGKDD-----VPASRIFEGMRFFVNGWTPLPVEELRALVHDHGGHIAAY-ETSDVTHMLCTNLPHAKLKQRRAQKLARGAHQQLPVIHPDYVQACVDKGRRLPPGDFLVDGVKHHHGQGIQSFMNQGKARDSDVGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRIVDINLLDIPAAVQETNETPPRLGTTQLTSSHHLQTAXXXXXXXSPYRPHLLHDVNNKCLKDKPLSSLAPLLPDGGKTTPTASPLPPQSSSPLKGLLDNKNDTITNAGGGGPLSTKDDPNFLQKYFKSSRLHFIGSFRARMQDLAADHARKCRAARATANXXXXXXXXXXXPCRLIMHVDMDCYFVSALIRDLPHLTHQPVAVAHGEGLDRNNCSSSEISSCNYPARAKGVRAGMFIGEARKLCPGLKMLHYDFGVYEKVSHAMYQVFFEEEAAMVVQPVSCDEAYIELVPGTDPEEAARRVRRRLMEKTRCPASAGVGGNMLLARLATKQAKPSGHKVMLRLEEAMTYLQELPLREIPGVGLELGMKLDQKGLGTCGEMWRVSMPALQSWFGEKTGSMLYRASRGQDDREVIPKVARKSVGAEVNWGVRFEERGEVEVFVGKLAEEVAVRMREARVRGRHLTFKIKRSQYGPKEPEKLLGCGRCDNLSRSVGLARATDAGKEIGMVSLRLLRQLNVPPDLVRGVGIQLTKL 742
            G FG YM++K+++L EQ           RG  D        S+IFEG+   VNG+T    +ELR L+  HGG    Y   + VTH++C+NLP +K+K+ R+   ++G    LPV+ P ++   +  G+ LP   + ++ + + +   + SF    K                                                       E  E    +   +  +SH                P+L  D   K ++            +GG           +  +   GL +N+      +      ST DDPNF+Q YFK SRLHFIG++R R Q      A      R T +             + I+HVDMDC+FVS + R+ P L  +PV V H +    ++  + EISS NY AR  GV+AGMF+  A+K CP L+++ YDF  YE+V+  +Y++      + +VQ +SCDEAY+++    DP   A  +RR + E TRC ASAG+  N+LLARLATK+AKP+G +  + L+EA  ++  LP+ E+PGVG  L  KL    L TC ++  ++   L+  FG KTG  LY  +RG D R+V     +KS+GAEVNWGVRF    + + F+  L+EEVA R+R+A V GR  T K+K+ + G  EPEK +GCG CDN+SRS  L   T++   +  +S +L   LN+    VRGVG+Q+T+L
Sbjct:   41 GDFGRYMTNKVRKLGEQFQAEASNPEASRGNADENSIEETTSKIFEGISIHVNGFTIPSHQELRTLMLRHGGTFENYFSKTRVTHIICSNLPQSKIKEFRS--FSKG----LPVLKPGWIVDSIAVGKLLPWASYQLEAI-YSNQSTLSSFYGTRKLLQDGT-------------------------------------------------ENVEEQELVAEAKPDTSH----------------PNLAGDGAGKEIEYDEQDE------EGG----------AEEVNVEDGLSENEYMEHRRSH-----STLDDPNFVQNYFKYSRLHFIGTWRNRYQ------ATVQMQRRVTLDPALE---------KSIIHVDMDCFFVSVVTRNRPELDGKPVGVCHSD----SSKGTGEISSANYEARTFGVKAGMFVKTAKKCCPNLEIVSYDFEGYEQVADKLYEILHRH--SPLVQAISCDEAYLDVSGMGDPASIASAIRREIFEATRCTASAGISANILLARLATKKAKPNG-QFQIHLQEAEEFMMNLPVEELPGVGWVLREKLHALKLFTCSDLRLLTSETLRKHFGAKTGETLYNHARGIDHRKVQAPQEKKSIGAEVNWGVRFSTLADAQNFLVTLSEEVASRLRKAAVHGRTFTMKVKKRKSGAGEPEKFMGCGICDNISRSTTLPSGTNSSDVLSRISRQLFGSLNLDVRDVRGVGLQVTRL 654

The following BLAST results are available for this feature:

BLAST of NO09G01610 vs. NCBI_GenBank

BLAST of NO09G01610 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20


Match Name	E-value	Identity	Description
EWM27548.1	7.800e-284	47.00	dna repair protein rev1 [Nannochloropsis gaditana]	[more]
XP_005852447.1	1.400e-245	59.69	DNA repair protein REV1, partial [Nannochloropsis ...	[more]
OWZ24483.1	3.100e-99	35.71	DNA repair protein [Phytophthora megakarya]	[more]
XP_024526731.1	1.400e-96	33.07	DNA repair protein REV1 isoform X1 [Selaginella mo...	[more]
XP_024526733.1	1.400e-96	33.07	DNA repair protein REV1 isoform X3 [Selaginella mo...	[more]
XP_009533420.1	2.500e-96	34.61	hypothetical protein PHYSODRAFT_317799 [Phytophtho...	[more]
XP_024543049.1	2.500e-96	33.47	DNA repair protein REV1 isoform X1 [Selaginella mo...	[more]
XP_024543052.1	2.500e-96	33.47	DNA repair protein REV1 isoform X3 [Selaginella mo...	[more]
XP_024526732.1	7.200e-96	33.61	DNA repair protein REV1 isoform X2 [Selaginella mo...	[more]
XP_024543050.1	9.400e-96	34.02	DNA repair protein REV1 isoform X2 [Selaginella mo...	[more]

Pages

Relationships

This gene is member of the following syntenic_region feature(s):


Feature Name	Unique Name	Species	Type
nonsL121	nonsL121	Nannochloropsis oceanica (N. oceanica IMET1)	syntenic_region
ncniR021	ncniR021	Nannochloropsis oceanica (N. oceanica IMET1)	syntenic_region
ngnoR128	ngnoR128	Nannochloropsis oceanica (N. oceanica IMET1)	syntenic_region
ngnoR127	ngnoR127	Nannochloropsis oceanica (N. oceanica IMET1)	syntenic_region

This gene is orthologous to the following gene feature(s):


Feature Name	Unique Name	Species	Type
NSK010715	NSK010715	Nannochloropsis salina (N. salina CCMP1776)	gene

The following polypeptide feature(s) derives from this gene:


Feature Name	Unique Name	Species	Type
NO09G01610.1	NO09G01610.1-protein	Nannochloropsis oceanica (N. oceanica IMET1)	polypeptide

The following gene feature(s) are orthologous to this gene:


Feature Name	Unique Name	Species	Type
jgi.p\|Nanoce1779_2\|630262	gene_4391	Nannochloropsis oceanica (N. oceanica CCMP1779)	gene
Naga_100015g71	gene2970	Nannochloropsis gaditana (N. gaditana B-31)	gene

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Species	Type
NO09G01610.1	NO09G01610.1	Nannochloropsis oceanica (N. oceanica IMET1)	mRNA

Sequences

The following sequences are available for this feature:

gene sequence
protein sequence

gene sequence

>NO09G01610 ID=NO09G01610|Name=NO09G01610|organism=Nannochloropsis oceanica|type=gene|length=3888bp
ATGTCTTCCCCGTCTCCACCCTCGAACCATAAGCGGCCTCCCCCTCCCGT
GCCTCAGGTCGGGGAGCACCATGGCGGAAGCTTTGGTGTTTACATGTCCC
ATAAAATCCAGCGTCTTAACGAGCAGCTAAACGAGCGTAGGGGAAAAGAT
GACGTGCCTGCGAGCCGGATTTTTGAAGGCATGCGGTTCTTTGTGAATGG
ATGGACGCCTTTGCCCGTGGAAGAGCTCCGGGCGTTGGTACATGATCATG
GGGGGCACATTGCGGCGTATGAAACTTCGGACGTCACGCACATGTTGTGT
ACAAACCTACCTCACGCCAAACTCAAGCAACGGCGTGCGCAAAAGCTTGC
TCGTGGAGCGCACCAGCAGCTTCCCGTGATACATCCCGACTACGTGCAGG
CCTGTGTTGATAAAGGTCGTCGGCTGCCCCCTGGTGATTTTCTTGTGGAC
GGTGTGAAGCATCACCATGGTCAGGGCATTCAGTCGTTTATGAATCAGGG
GAAGGCTCGGGATAGTGATGTTGGTAGTGGTGGTGGAGGCAGTTCAGACA
CAAAAATTTGCGCCGTAGCTGGGGGGAGTGGCGGCAAGGCCAACAACACA
GCGCGAGCAACTAGCTCGACGACCAGAATTGTAGATATCAACTTACTAGA
CATACCAGCGGCAGTGCAAGAGACAAATGAGACACCCCCACGGTTGGGGA
CCACACAGCTCACCTCCTCGCACCACCTTCAGACGGCAACAGCAGCAGCA
GCAGCAGCATCGCCATACCGCCCTCACCTGCTGCACGATGTGAATAATAA
GTGTCTAAAAGATAAGCCACTTTCTTCACTCGCTCCCTTGTTGCCAGATG
GCGGAAAAACTACCCCAACTGCATCGCCACTCCCACCCCAGTCCTCTTCC
CCCTTGAAAGGGCTGCTCGACAACAAAAACGATACCATCACTAACGCCGG
CGGTGGCGGGCCACTTTCCACCAAAGACGATCCAAATTTTCTTCAAAAGT
ACTTCAAATCCTCCCGTCTCCATTTCATCGGTAGCTTCCGCGCACGCATG
CAAGACTTAGCCGCCGATCACGCCCGGAAATGCCGCGCAGCACGAGCAAC
AGCGAACACGATGAGCAGCAGCAGCAGCAATAATAATAATCCTTGTCGTC
TTATCATGCACGTGGACATGGACTGCTACTTTGTCAGCGCCCTTATTCGG
GATCTCCCCCATCTTACTCACCAACCCGTCGCTGTGGCGCACGGTGAAGG
CCTCGACCGGAACAACTGCAGTAGCAGCGAGATCTCCTCGTGCAACTACC
CAGCTCGTGCGAAGGGTGTCAGGGCAGGAATGTTTATAGGAGAGGCTCGT
AAGTTATGCCCTGGGTTGAAGATGCTCCACTATGATTTTGGTGTGTATGA
AAAAGTGTCCCATGCTATGTACCAAGTTTTTTTTGAGGAGGAGGCCGCGA
TGGTCGTCCAACCTGTTTCGTGCGACGAGGCTTACATTGAGCTTGTGCCA
GGGACGGACCCTGAGGAAGCAGCACGGAGGGTGAGGAGACGACTGATGGA
AAAGACACGGTGTCCGGCAAGTGCGGGGGTGGGGGGAAATATGCTCTTGG
CGCGGTTGGCGACGAAGCAGGCGAAGCCGAGCGGGCATAAGGTGATGTTG
AGGTTGGAGGAGGCGATGACGTATTTGCAGGAGTTGCCACTTAGGGAAAT
ACCTGGCGTTGGGTTGGAGCTGGGGATGAAATTGGATCAAAAGGGGTTGG
GCACTTGTGGGGAGATGTGGAGGGTGAGCATGCCGGCGTTGCAGTCCTGG
TTTGGGGAGAAGACGGGCTCGATGTTATACAGGGCGAGTAGAGGGCAGGA
CGACCGAGAGGTGATTCCGAAGGTAGCGAGGAAGAGTGTTGGAGCCGAGG
TTAATTGGGGTGTACGATTTGAGGAGAGAGGGGAGGTTGAGGTCTTTGTG
GGCAAGTTGGCGGAGGAAGTAGCAGTGAGAATGAGGGAGGCGAGGGTGAG
GGGACGGCATTTGACGTTCAAAATTAAACGGTCGCAGTATGGGCCGAAGG
AGCCGGAGAAATTGTTGGGGTGTGGGAGGTGCGACAATTTGAGTCGTTCG
GTGGGGTTGGCAAGAGCGACGGATGCAGGGAAAGAGATTGGGATGGTGTC
GTTGAGGTTGCTTAGGCAGCTGAATGTGCCTCCTGATTTGGTGAGGGGGG
TTGGGATTCAGCTAACCAAGCTGGTGGTGGAAGGGGGGGAAGAAGGGGGG
GAAGAAGGGGGAGGAGGGAGGATACAGACGTGGTTGATGAAATCGGGCGT
CGGTTGTGGCGGTCGTGGTGGGGACGAAAGCGAGAAAGAGGAAAAGAAGG
AGAAGGGGGCTGTGGAATTGGTGGTAGTGGAGGAAAACGAGGAGGAAGGG
TGGGAGGACGAGGATGAGATTGGTGACAAGGAGTGGCAGGGATGGAAGAA
GCAGTCCGCAAAGCTACCCTCTACGGGTCAGAAGGCCGAGGGAGGGAAGG
AAGGGAGAGAAGAAGTGCACCTTTCTCTTGAAAACTATGCGCTACCGCCG
CCATCTCAGATTGACGTCTCGGTCTTGACGGCACTGCCTCCGTCGATGCG
GACAGCGCTGGAGCTGCACTTGCAGCAACGGGAGCAGCGACAGTCATTGC
ACGAGCAGCACCAGGCGGAAGAGGAGGGGGCTGCCTGGAGCTCCCTCCAG
CACTGGGACGTGACCATGAGTCAGATCGACGATTCGACCCTTCGAGCTTT
GCCTTTAGACATGCAAAACGAAGTCCGCGCGGTCGTGCGTCGGAAGTGTC
CTGCTGCGACTCCTGCTGCGACCGATGCGGTGGCAGCTGCTGCAGCAGCT
GATAAAGCTCGGAGTTGTTGGTTCGGGAGCCCGGAGAACGATATCGGCGG
TAATGGCAGCAGCAGCAGCAGCAACGGCGGCGGCGGGAGCAGGAGTAAAG
GTGGAACTGGAGAAAAAGCAAGGTCCGTGGGTATTTCCCAAAGCCCTCCT
CAACGACAACATTACCAGCAGCAACAGCAGCAACAGCAGCAACAGCATCA
CCATCGCATGATGAGGCAGAGGCAATTGAAAATGCACGCATATGACCATT
CGGGTGCACAATTCAAAGGCTTGCCTGCACATGACGCGGCCTTTTTAACT
AACCTTCCCATGCCTCTACGCATTGAGACTTTGGCGGATCTGGAGCGACA
TAAACGGATGCATATCACAAGAGATATGACGGCCAGCAGCAGCAACGGCA
GCAGCGGCAACAAGAGCAGCATCATCATCAGCAACAGCAGTACATCTATG
TTACCCCCATCTCCGCGACTGCCCCCGGTGGTAGGACGGAAGCCGATGGA
AGAGGTGGTGATTGACGTGGACAAGGAGGAGGAGAAGGAACGTAAGCCAG
AACAAAGTAGCCAAAGCATGGAATATCGCACTCGCTTGTTTGTGGACGAG
GATGTGAATGATGTGAGGCGGGCGTTGGTAGAGTGGCTGCGAAATGTTCG
GGGGTCAGCCGGGGGGTCGGACGGGCGTAAATCCCTTCCACAGACGGCCC
ATTTGCAGCTGCTGGCCGTTTATCTGCTTGAGAGAGTGGATGAGGGAAGC
GAAGACGATGTATGGACATTGATGCGAAGTTTTCGGAGGTGGGTAACGAA
TGAAGGTCACGAGGCATGGCGTCTGGCTTATCGTGCTGTATTGGGAGTGT
TGGAGACCCGTGTGGCGGAGCGGGAACGGCCACAGGAGGAGCGGCTGCAG
GGATGGTCGGTGGAGGGCTCGGCTGTCGTGACAGGAGCAATCAAGTGGGC
GGGTTTGCAGTTGTAGTATCCCAACAAAAAACATAAATACAAGATGTATA
GATGAAACAAAATAAAGAAAAAGTACATACAAGAAAGA

protein sequence of NO09G01610.1

>NO09G01610.1-protein ID=NO09G01610.1-protein|Name=NO09G01610.1|organism=Nannochloropsis oceanica|type=polypeptide|length=1272bp
MSSPSPPSNHKRPPPPVPQVGEHHGGSFGVYMSHKIQRLNEQLNERRGKD
DVPASRIFEGMRFFVNGWTPLPVEELRALVHDHGGHIAAYETSDVTHMLC
TNLPHAKLKQRRAQKLARGAHQQLPVIHPDYVQACVDKGRRLPPGDFLVD
GVKHHHGQGIQSFMNQGKARDSDVGSGGGGSSDTKICAVAGGSGGKANNT
ARATSSTTRIVDINLLDIPAAVQETNETPPRLGTTQLTSSHHLQTATAAA
AAASPYRPHLLHDVNNKCLKDKPLSSLAPLLPDGGKTTPTASPLPPQSSS
PLKGLLDNKNDTITNAGGGGPLSTKDDPNFLQKYFKSSRLHFIGSFRARM
QDLAADHARKCRAARATANTMSSSSSNNNNPCRLIMHVDMDCYFVSALIR
DLPHLTHQPVAVAHGEGLDRNNCSSSEISSCNYPARAKGVRAGMFIGEAR
KLCPGLKMLHYDFGVYEKVSHAMYQVFFEEEAAMVVQPVSCDEAYIELVP
GTDPEEAARRVRRRLMEKTRCPASAGVGGNMLLARLATKQAKPSGHKVML
RLEEAMTYLQELPLREIPGVGLELGMKLDQKGLGTCGEMWRVSMPALQSW
FGEKTGSMLYRASRGQDDREVIPKVARKSVGAEVNWGVRFEERGEVEVFV
GKLAEEVAVRMREARVRGRHLTFKIKRSQYGPKEPEKLLGCGRCDNLSRS
VGLARATDAGKEIGMVSLRLLRQLNVPPDLVRGVGIQLTKLVVEGGEEGG
EEGGGGRIQTWLMKSGVGCGGRGGDESEKEEKKEKGAVELVVVEENEEEG
WEDEDEIGDKEWQGWKKQSAKLPSTGQKAEGGKEGREEVHLSLENYALPP
PSQIDVSVLTALPPSMRTALELHLQQREQRQSLHEQHQAEEEGAAWSSLQ
HWDVTMSQIDDSTLRALPLDMQNEVRAVVRRKCPAATPAATDAVAAAAAA
DKARSCWFGSPENDIGGNGSSSSSNGGGGSRSKGGTGEKARSVGISQSPP
QRQHYQQQQQQQQQQHHHRMMRQRQLKMHAYDHSGAQFKGLPAHDAAFLT
NLPMPLRIETLADLERHKRMHITRDMTASSSNGSSGNKSSIIISNSSTSM
LPPSPRLPPVVGRKPMEEVVIDVDKEEEKERKPEQSSQSMEYRTRLFVDE
DVNDVRRALVEWLRNVRGSAGGSDGRKSLPQTAHLQLLAVYLLERVDEGS
EDDVWTLMRSFRRWVTNEGHEAWRLAYRAVLGVLETRVAERERPQEERLQ
GWSVEGSAVVTGAIKWAGLQL*

Synonyms

Publications