NO09G01600, NO09G01600 (gene) Nannochloropsis oceanica

Overview
NameNO09G01600
Unique NameNO09G01600
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1586
Alignment locationchr9:504001..505586 -

Link to JBrowse

Properties
Property NameValue
DescriptionUreidoglycolate dehydrogenase
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr9genomechr9:504001..505586 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
PXD0166992021-01-08
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
PXD0100302020-03-16
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PXD0087212019-04-30
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0016491oxidoreductase activity
GO:0003824catalytic activity
Vocabulary: Biological Process
TermDefinition
GO:0055114oxidation-reduction process
GO:0008152metabolic process
GO:0008152metabolic process
Vocabulary: INTERPRO
TermDefinition
IPR036111Mal/L-sulfo/L-lacto_DH-like_sf
IPR003767Malate/L-lactate_DH
Homology
BLAST of NO09G01600 vs. NCBI_GenBank
Match: EWM27621.1 (ureidoglycolate dehydrogenase [Nannochloropsis gaditana])

HSP 1 Score: 510.4 bits (1313), Expect = 4.900e-141
Identity = 267/373 (71.58%), Postives = 302/373 (80.97%), Query Frame = 0
Query:    1 MPQTRKEEVEMDVSELEAMTQRLLQRSLGYDAQAAALIMRVLLYAQMRGNSQGVIKLLTGGVPAYEASKGTPIEVEHETKLSARLHGHGTSGMLVLDRAVTMAITKAKDHGLSMVAAHGTSSGTGAIGFFARTMADAGLVGIVLSQSPELMAPHGSYEPIFGTNPFSVGIPREDGASPLVLDMATSAYAWYALKEAQAAGHAIPPDVAFDARGRPTTDPSEALAGALRVFDRSYKGSHIALMVEILGGALAGGDVEEKWARGNWGNLVLAIDPEVLGQSLGAFTAKVEAVVRRVKEAKPVPSSMTMEKGEIEEGXXXXXXXXXXXXXXXXXXXXXGGPSLPGERSEALAAIVLKRGRICLERSVYEGLIKAAA 374
            MP TRKEEVEMD+SELEA+TQRLLQ+SL Y+ + AA+I RVLLYAQMRGNSQGVIKL+TGGVPA +AS  T IEVEHETK+SARLHGHGT+GMLVL RA +MAI KA++HGLS+VA HGTSSGTGAIGF+AR++AD GLVGI+LSQSPELMAPHGSYEPIFGTNPF+ GIPR+D + P+VLDMATSAYAWYALKEA+AAG  IPPDVA+DA G PT DPS AL+GALRVFDRS+KGSHIALMVE+L G L G DVEEKW R NWGNLV+AIDPEVLGQ L  FTAKVEAVVRRV+ AKP+P +   E+G+                          GPSLPG RSEA AA V +RGRI LERSVYE L+K  A
Sbjct:    1 MPPTRKEEVEMDLSELEAVTQRLLQQSLNYNEEEAAIITRVLLYAQMRGNSQGVIKLVTGGVPASDASTHTDIEVEHETKVSARLHGHGTAGMLVLHRATSMAIQKAREHGLSIVATHGTSSGTGAIGFYARSVADNGLVGIILSQSPELMAPHGSYEPIFGTNPFAFGIPRDDTSIPIVLDMATSAYAWYALKEARAAGQPIPPDVAYDAEGHPTRDPSAALSGALRVFDRSHKGSHIALMVELLAGGLTGADVEEKWQRENWGNLVVAIDPEVLGQGLAQFTAKVEAVVRRVEGAKPLPGATAQERGD--------------GSAQLRSGGDVRGPSLPGSRSEAEAATVAERGRIRLERSVYENLMKEVA 359          
BLAST of NO09G01600 vs. NCBI_GenBank
Match: CBJ32996.1 (putative malate/L-lact (ISS) [Ectocarpus siliculosus])

HSP 1 Score: 300.1 bits (767), Expect = 1.000e-77
Identity = 165/366 (45.08%), Postives = 232/366 (63.39%), Query Frame = 0
Query:    9 VEMDVSELEAMTQRLLQRSLGYDAQAAALIMRVLLYAQMRGNSQGVIKLLTGGVPAYEASKGTPIEVEHETKLSARLHGHGTSGMLVLDRAVTMAITKAKDHGLSMVAAHGTSSGTGAIGFFARTMADAGLVGIVLSQSPELMAPHGSYEPIFGTNPFSVGIPREDGASPLVLDMATSAYAWYALKEAQAAGHAIPPDVAFDARGRPTTDPSEALAGALRVFDRSYKGSHIALMVEILGGALAGGDVEEKWARGNWGNLVLAIDPEVLGQSLGAFTAKVEAVVRRVKEAKPVPSSMTMEKGEIEEGXXXXXXXXXXXXXXXXXXXXXGGPSLPGERSEALAAIVLKRGRICLERSVYEGLIKAAAV 375
            VE+ ++EL+ + ++ + + LGY+ +   +I  +L+Y+Q+RG +QG+IK++T G  A +A    P +V HE+KLSARL G  T GMLV+ +AV MAI KAK+HG  MV    TS+ TG+IG++AR +ADAGL+    +QSPE +AP G+YE + GTNP +VGIPRE+G  P+VLDMAT+AY ++ L EA+ AG  IP DVA+DA G  TTDP+EAL GA+RVFDRSYKG +++L+VE+L G L      +K +  NWGNLVLA+DPE++G     F A  E V+ R+K AK +P    +                                 LPGE   A AA V   G + +E+++YEG+  AA +
Sbjct:   21 VEVPLAELKDVAEKGVSK-LGYNEEDTKVICDILMYSQLRGGNQGLIKIITHG--ADKAPDCVPAKVVHESKLSARLDGGKTHGMLVVSKAVNMAIAKAKEHGFGMVGTSNTSTSTGSIGYYARAIADAGLIAFCFAQSPEFVAPFGAYEALLGTNPIAVGIPREEGKEPIVLDMATAAYPFFGLLEAKTAGKPIPGDVAYDAEGNATTDPAEALKGAIRVFDRSYKGGNLSLIVELLAGPLVRAATTDKKSAKNWGNLVLAVDPELMGDK-AEFAAGTETVLARIKGAKKLPGVKEI--------------------------------MLPGEGGSARAAAVSASGVVSVEKNLYEGMKTAAGL 350          
BLAST of NO09G01600 vs. NCBI_GenBank
Match: KXZ54908.1 (hypothetical protein GPECTOR_4g980 [Gonium pectorale])

HSP 1 Score: 274.6 bits (701), Expect = 4.500e-70
Identity = 146/301 (48.50%), Postives = 211/301 (70.10%), Query Frame = 0
Query:    2 PQTRKEEVEMDVSELEAMTQRLLQRSLGYDAQAAALIMRVLLYAQMRGNSQGVIKLLTGGVPAYEASKGTPIEVEHETKLSARLHGHGTSGMLVLDRAVTMAITKAKDHGLSMVAAHGTSSGTGAIGFFARTMADAGLVGIVLSQSPELMAPHGSYEPIFGTNPFSVGIPREDGASPLVLDMATSAYAWYALKEAQAAGHAIPPDVAFDARGRPTTDPSEAL-AGALRVFDRSYKGSHIALMVEILGGALAGGDVEEKWARGNWGNLVLAIDPEVLGQSLGAFTAKVEAVVRRVKEAKPVP 302
            P + K+ VE+ ++EL  +  + L ++LGY  +   ++  VL YAQ+R N+QG+IK+ +GG+   ++    P  +E ET+LSA ++G+ ++GMLVL +A  MAI +AK  G  +V  + T S TGA+G++   ++  GL+GIVL+QSPE +APHG+ +PIFGTNP  + IP ++GA  + +DMATSAYAW+ L EA+AAG  IP DVA +A G+ TTDP+E L  GA+RVFDRSYKGS++ALMVE+L G L G  V +K A  NWGNLVLA+DP +LG+   A   +V+ V+ RV+ A+ +P
Sbjct:    6 PSSEKQTVEVGIAELRTLCTKAL-KTLGYKQEEIDILNDVLFYAQLRDNNQGIIKITSGGL--NKSPSARPPVIEKETRLSALINGNNSAGMLVLHKATQMAIERAKSQGFGIVGTNHTPSSTGALGYYVDLISREGLIGIVLAQSPEFVAPHGAKQPIFGTNPIGISIPAQEGA--VTMDMATSAYAWFGLLEAKAAGRPIPGDVAMNAAGQATTDPNEVLQGGAIRVFDRSYKGSNLALMVELLAGPLVGAAVADKLAERNWGNLVLALDPGLLGEP-EALKQRVQVVLDRVRGAERLP 300          
BLAST of NO09G01600 vs. NCBI_GenBank
Match: XP_005647032.1 (putative malate/L-lact, partial [Coccomyxa subellipsoidea C-169] >EIE22488.1 putative malate/L-lact, partial [Coccomyxa subellipsoidea C-169])

HSP 1 Score: 257.3 bits (656), Expect = 7.400e-65
Identity = 144/317 (45.43%), Postives = 207/317 (65.30%), Query Frame = 0
Query:    2 PQTRKEEVEMDVSELEAMTQRLLQRSLGYDAQAAALIMRVLLYAQMRGNSQGVIKLLTGGVPAYEASKGT-PIEVEHETKLSARLHGHGTSGMLVLDRAVTMAITKAKDHGLSMVAAHGTSSGTGAIGFFARTMADAGLVGIVLSQSPELMAPHGSYEPIFGTNPFSVGIPREDGASPLVLDMATSAYAWYALKEAQAAGHAIPPDVAFDARGRPTTDPSEAL-AGALRVFDR---------------SYKGSHIALMVEILGGALAGGDVEEKWARGNWGNLVLAIDPEVLGQSLGAFTAKVEAVVRRVKEAKPVP 302
            P +  +   + +S+L  + ++ + R+LGY  +   +I+  +L++Q+RGNSQGVIK+ +G   A+    GT P  V  ++ +SA + G    GML L +A  +A+ KAK  G+ +V  + T+S TGA+G +   +ADAGLVGI++ QSPE +APHGS E IFGTNP ++G P + G  P+++D+ATSA +WY+L EA+ +G A+  D+ +DARG PTTDP   L  GA+R FDR               SYKGS +AL+VEILGGALAGG V  K A  NWG+LV A+DP  LG +  AF+++V A++RRVK A+P P
Sbjct:   27 PTSTSDTEAIPISDLRGLLEQAI-RALGYSEEETDVIVEAILWSQLRGNSQGVIKIPSG---AFAIPPGTGPAVVVQDSPVSASIDGQQCLGMLALHKATKLAVAKAKQAGVGIVGINNTASTTGALGHWVEQIADAGLVGIIMCQSPEYVAPHGSTEAIFGTNPIALGCPSDGG--PVIVDLATSAQSWYSLLEAKESGQAVGEDIGYDARGEPTTDPGSILDGGAIRTFDRHAPCHRHRTEFFLELSYKGSALALLVEILGGALAGGAVVGKAAARNWGSLVAAVDPAALGDA-AAFSSRVSALLRRVKAARPAP 336          
BLAST of NO09G01600 vs. NCBI_GenBank
Match: XP_001422561.1 (predicted protein [Ostreococcus lucimarinus CCE9901] >ABP00878.1 predicted protein [Ostreococcus lucimarinus CCE9901])

HSP 1 Score: 256.5 bits (654), Expect = 1.300e-64
Identity = 149/361 (41.27%), Postives = 212/361 (58.73%), Query Frame = 0
Query:   13 VSELEAMTQRLLQRSLGYDAQAAALIMRVLLYAQMRGNSQGVIKLLTGGVPAYEASKGTPIEVEHETKLSARLHGHGTSGMLVLDRAVTMAITKAKDHGLSMVAAHGTSSGTGAIGFFARTMADAGLVGIVLSQSPELMAPHGSYEPIFGTNPFSVGIPREDGASPLVLDMATSAYAWYALKEAQAAGHAIPPDVAFDARGRPTTDPSEAL-AGALRVFDRSYKGSHIALMVEILGGALAGGDVEEKWARGNWGNLVLAIDPEVLGQSLGAFTAKVEAVVRRVKEAKPVPSSMTMEKGEIEEGXXXXXXXXXXXXXXXXXXXXXGGPSLPGERSEALAAIVLKRGRICLERSVYEGLIKAA 373
            + EL+  T + + R +GY+ + A +I+ VL+YAQ+RGN+QG+IK+ T G+    A    P+ V HETKLSA + G  T GMLVL  A  +A  KAK+HG  +V    TS+ TGA+G++ +++AD G++ I  +QSPE +AP GS + IFGTNP  VGIP  +GA  +VLDMATSAY+W+ + EA+ AG  +P   A D  G  T DP+E L  GA+R FD  YK S++AL++E+L G L G  +E K A  NWGNL++ IDP++LGQ+   F      V+ RV+ A   P    +                                +LPGER +A+A     +G I +E +++  L KAA
Sbjct:    4 IEELKTTTTKAI-RGIGYNEKDAKVILDVLMYAQLRGNNQGIIKVTTNGLAM--APDAEPMVVTHETKLSAAIDGKKTQGMLVLAEATRVAHEKAKEHGFGIVGTCNTSTSTGALGYYCKSVADQGMISICFAQSPEFVAPAGSSKAIFGTNPIGVGIPSSEGA--MVLDMATSAYSWFGVLEAKTAGRELPDGAAQDKNGVLTKDPNEVLDGGAIRTFDGGYKSSNLALVIELLAGPLVGAAIEGKLAAKNWGNLIMVIDPKMLGQA--DFEKNAAFVMNRVRNAPKQPGVDAI--------------------------------NLPGERGDAIAKANEAKGEIDVETNLWNNLKKAA 325          
BLAST of NO09G01600 vs. NCBI_GenBank
Match: XP_002506194.1 (malate dehydrogenase (, partial [Micromonas commoda] >ACO67452.1 malate dehydrogenase (, partial [Micromonas commoda])

HSP 1 Score: 252.3 bits (643), Expect = 2.400e-63
Identity = 137/294 (46.60%), Postives = 199/294 (67.69%), Query Frame = 0
Query:    9 VEMDVSELEAMTQRLLQRSLGYDAQAAALIMRVLLYAQMRGNSQGVIKLLTGGVPAYEASKGTPIEVEHETKLSARLHGHGTSGMLVLDRAVTMAITKAKDHGLSMVAAHGTSSGTGAIGFFARTMADAGLVGIVLSQSPELMAPHGSYEPIFGTNPFSVGIPREDGASPLVLDMATSAYAWYALKEAQAAGHAIPPDVAFDARGRPTTDPSEAL-AGALRVFDRSYKGSHIALMVEILGGALAGGDVEEKWARGNWGNLVLAIDPEVLGQSLGAFTAKVEAVVRRVKEAKPVP 302
            V + ++EL    +R + ++ GYD     +++ V++YAQ+RGN+QG+IK+ T G+    A   TPI +EHET+LSA L+G+  +GM+V+ +A+ +AI KAK HG  +   + TS+ TGA+G++A+ +A+ GL+ +V + SPE +AP+G+ +PIFGTNP  VGIP      P+VLDMATSAY+++ L EA+ AG  IP  VA D+ G+ T DP+ A+  GA+  FD  YK S++ALMVE+L G L G  V +K A  NWGNLV+AIDP++LGQ    F  + + V  RVK AK  P
Sbjct:    1 VSVPITELTETCRRAI-KTYGYDDVETQILLDVMMYAQLRGNNQGIIKVTTKGIARDPAC--TPIAIEHETQLSACLNGNKNAGMVVIHKAMDIAIEKAKTHGFGICGTNNTSTSTGALGYYAQKIAEEGLIAMVFAVSPEFVAPNGAIQPIFGTNPIGVGIP--TAGKPVVLDMATSAYSFFGLLEARTAGKKIPHGVAIDSAGKITEDPNAAIDGGAIVGFDGGYKSSNLALMVELLAGPLVGAAVTDKMAAKNWGNLVVAIDPKLLGQD--EFERRAKMVTDRVKAAKRQP 287          
BLAST of NO09G01600 vs. NCBI_GenBank
Match: OGU10605.1 (hypothetical protein A2075_04370 [Geobacteraceae bacterium GWC2_58_44])

HSP 1 Score: 250.4 bits (638), Expect = 9.100e-63
Identity = 155/370 (41.89%), Postives = 216/370 (58.38%), Query Frame = 0
Query:    9 VEMDVSELEAMTQRLLQRSLGYDAQAAALIMRVLLYAQMRGNSQGVIKLLTGGVPAYEASKGTPIEVEHETKLSARLHGHGTSGMLVLDRAVTMAITKAKDHGLSMVAAHGTSSGTGAIGFFARTMADAGLVGIVLSQSPELMAPHGSYEPIFGTNPFSVGIPREDGASPLVLDMATSAYAWYALKEAQAAGHAIPPDVAFDARGRPTTDPSEALAGALRVFDRSYKGSHIALMVEILGGALAG------GDVEEKWARGNWGNLVLAIDPEVLGQSLGAFTAKVEAVVRRVKEAKPVPSSMTMEKGEIEEGXXXXXXXXXXXXXXXXXXXXXGGPSLPGERSEALAAIVLKRGRICLERSVYEGLIKAA 373
            +++ +SELE +T R + RS GY  +   +I  VLLYAQ+RGN+QGV+KL+  G+PA   +    I VE ET++SAR++G+    M+V+ +A+ M   KAK  G  +     TS+ +GAIG+FA  +A  GL+G +  +SPE +A HGS EP+FGTNP +VGIP +    P+VLDM+T+A ++Y L EA+ AG AIP DVAF+  GRPTT   EA+ GA+R FDRS+KGS + L+ EIL G L G      GD     ++GNWG+L+ AIDP +LG    AF   V  + R+VK  + +P    +                                +LPGER   LAA  L  G I +E ++ E L K A
Sbjct:    1 MKISISELEDLTLRAV-RSYGYTDEEVRVISDVLLYAQLRGNNQGVVKLIGKGIPADPGA--GEIAVEMETQISARINGNRKHAMVVVRKAMEMVADKAKKSGFGIAGTFNTSTSSGAIGYFASELAKQGLIGFLFGRSPERVAMHGSCEPVFGTNPLAVGIPSQ--PDPVVLDMSTAAISFYGLVEAETAGRAIPDDVAFNVEGRPTTSAHEAIKGAIRSFDRSHKGSGLGLIGEILAGPLVGAAFCGLGD-----SKGNWGHLLFAIDPGILGDR-DAFIQSVGEICRKVKGTRKLPGVAEI--------------------------------NLPGERGSLLAAQRLACGEIEVEENLLEELRKVA 327          
BLAST of NO09G01600 vs. NCBI_GenBank
Match: XP_007513038.1 (ureidoglycolate dehydrogenase [Bathycoccus prasinos] >CCO16596.1 ureidoglycolate dehydrogenase [Bathycoccus prasinos])

HSP 1 Score: 249.6 bits (636), Expect = 1.500e-62
Identity = 148/364 (40.66%), Postives = 216/364 (59.34%), Query Frame = 0
Query:   11 MDVSELEAMTQRLLQRSLGYDAQAAALIMRVLLYAQMRGNSQGVIKLLTGGVPAYEASKGTPIEVEHETKLSARLHGHGTSGMLVLDRAVTMAITKAKDHGLSMVAAHGTSSGTGAIGFFARTMADAGLVGIVLSQSPELMAPHGSYEPIFGTNPFSVGIPREDGASPLVLDMATSAYAWYALKEAQAAGHAIPPDVAFDARGRPTTDPSEAL-AGALRVFDRSYKGSHIALMVEILGGALAGGDVEEKWARGNWGNLVLAIDPEVLGQSLGAFTAKVEAVVRRVKEAKPVPSSMTMEKGEIEEGXXXXXXXXXXXXXXXXXXXXXGGPSLPGERSEALAAIVLKRGRICLERSVYEGLIKAAA 374
            + + EL   T++ + ++ GYD +A   I+ +L+YAQ+RGN+QG+IK+ T G+      + TPI++     LSA + G    GM+VLD+A  +AI K K HG+ +V  + T + TGA+G++A+ + + G+VGIVL+QSPE +AP G+ + IFGTNP    IPR+ G  P+ LDMATSAYA++ L EA+ +G  +PP+VA D  G  TTD + AL  GA+  FD  YK S+++L +E+L G L G    +K A  NWGNLV AIDP++LG     F  +   V+ RVK A            E +EG                        +LPGER +ALAA   K+G I +E ++++GL + AA
Sbjct:   46 VSIDELTETTRKAI-KTYGYDEKATECILDILMYAQLRGNNQGIIKVTTNGIA--RDPEATPIKITEPVPLSAAIDGGNNHGMIVLDKAAEIAIEKCKQHGVGVVGTNHTFTSTGALGYYAKKIGEQGMVGIVLAQSPEFVAPAGAKQAIFGTNPIGCSIPRK-GGEPMTLDMATSAYAFFGLLEAKTSGKPLPPNVAQDKDGNMTTDANAALDGGAIMTFDCGYKSSNLSLCIELLAGPLVGAAYNDKKAAKNWGNLVFAIDPKILGND--DFLEQSAFVMERVKNA------------ERKEG--------------------VSSINLPGERGDALAAENKKKGTIGVEPNLWKGLQEYAA 371          
BLAST of NO09G01600 vs. NCBI_GenBank
Match: XP_003083014.1 (Malate/L-lactate dehydrogenase [Ostreococcus tauri] >CAL56969.1 Malate/L-lactate dehydrogenase [Ostreococcus tauri])

HSP 1 Score: 248.8 bits (634), Expect = 2.600e-62
Identity = 142/364 (39.01%), Postives = 213/364 (58.52%), Query Frame = 0
Query:   10 EMDVSELEAMTQRLLQRSLGYDAQAAALIMRVLLYAQMRGNSQGVIKLLTGGVPAYEASKGTPIEVEHETKLSARLHGHGTSGMLVLDRAVTMAITKAKDHGLSMVAAHGTSSGTGAIGFFARTMADAGLVGIVLSQSPELMAPHGSYEPIFGTNPFSVGIPREDGASPLVLDMATSAYAWYALKEAQAAGHAIPPDVAFDARGRPTTDPSEAL-AGALRVFDRSYKGSHIALMVEILGGALAGGDVEEKWARGNWGNLVLAIDPEVLGQSLGAFTAKVEAVVRRVKEAKPVPSSMTMEKGEIEEGXXXXXXXXXXXXXXXXXXXXXGGPSLPGERSEALAAIVLKRGRICLERSVYEGLIKAA 373
            ++ + EL++ T R + R +GYD + AA+I+ VL+YAQ+RGN+QG+IK+ T G+     +K  P+++ HE+KLSA + G  T GM+VL  A  +A  KAK+HG  +     T + TGA+G++ + +AD G++ +  +QSPE +AP G+ + IFGTNP  VG+P   G+  +VLDMATSAY+W+ + EA+ AG  +P   A D  G  TTDP+E +  GA+R FD  YK S++AL++E+L G L G  ++ K    NWGNL++ IDP++LGQ+   F      V+ RVK A   P    +                                +LPGER +ALA      G + +E +++  L KAA
Sbjct:   43 QVPIDELKSTTLRAI-RGIGYDEKDAAVILDVLMYAQLRGNNQGIIKVTTNGLAKDPEAK--PMKITHESKLSAAIDGQKTQGMIVLAEATRIAHEKAKEHGFGICGTCNTFTSTGALGYYVKKVADEGMIALCFAQSPEFVAPAGAAKGIFGTNPIGVGMPSSQGS--MVLDMATSAYSWFGVLEAKTAGRQLPEGAAQDKNGVMTTDPNEVVDGGAIRTFDGGYKSSNLALIIELLAGPLVGAAIDSKLTAKNWGNLIMVIDPKMLGQA--DFEKNAAFVMNRVKNAPKQPGVDQI--------------------------------NLPGERGDALAKANEAAGVVDVETNLWNDLKKAA 367          
BLAST of NO09G01600 vs. NCBI_GenBank
Match: XP_003056705.1 (predicted protein, partial [Micromonas pusilla CCMP1545] >EEH58350.1 predicted protein, partial [Micromonas pusilla CCMP1545])

HSP 1 Score: 248.8 bits (634), Expect = 2.600e-62
Identity = 141/306 (46.08%), Postives = 193/306 (63.07%), Query Frame = 0
Query:    2 PQTRKE---EVEMDVSELEAMTQRLLQRSLGYDAQAAALIMRVLLYAQMRGNSQGVIKLLTGGVPAYEASKGTPIEVEHETKLSARLHGHGTSGMLVLDRAVTMAITKAKDHGLSMVAAHGTSSGTGAIGFFARTMADAGLVGIVLSQSPELMAPHGSYEPIFGTNPFSVGIPREDGASPLVLDMATSAYAWYALKEAQAAGHAIPPDVAFDARGRPTTDPSEAL-AGALRVFDRSYKGSHIALMVEILGGALAGGDVEEKWARGNWGNLVLAIDPEVLGQSLGAFTAKVEAVVRRVKEAKPVPSS 304
            P T KE   +V + + EL    +R + ++ GYD     +++ V+LYAQ+RGN+QG+IK+ T G+        TP  + HETKLSA   G   +GM+VL RA+  AI KAK HG+ +     T + TGA+G++A  +A+ GL+ +VL+ SPE +AP G+ EPIFGTNP  VGIP   G  P+VLDMATSAY+++ L EA+ AG  IP  VA D  G  T DP+  +  GA++ FD  YK S++AL+VE+L G L G  V  K +  NWGNLV+AIDP +LGQ    F  +   V RRVK+AK  P +
Sbjct:   65 PSTPKESAPDVTVPIDELTETCRRAI-KTYGYDDDETRILLDVMLYAQLRGNNQGIIKVTTKGIA--RDPSATPATITHETKLSAAYDGGKNAGMVVLHRAMENAIDKAKAHGVGVCGTCNTFTSTGALGYYAEKVANEGLIALVLAVSPEFVAPAGAIEPIFGTNPIGVGIPTATG--PVVLDMATSAYSFFGLLEARTAGKKIPLGVAIDGSGSLTEDPNAVIDGGAIKTFDGGYKSSNLALIVELLAGPLVGAAVTSKMSEKNWGNLVVAIDPALLGQD--EFEKRAAIVTRRVKDAKKAPGT 363          
The following BLAST results are available for this feature:
BLAST of NO09G01600 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM27621.14.900e-14171.58ureidoglycolate dehydrogenase [Nannochloropsis gad... [more]
CBJ32996.11.000e-7745.08putative malate/L-lact (ISS) [Ectocarpus siliculos... [more]
KXZ54908.14.500e-7048.50hypothetical protein GPECTOR_4g980 [Gonium pectora... [more]
XP_005647032.17.400e-6545.43putative malate/L-lact, partial [Coccomyxa subelli... [more]
XP_001422561.11.300e-6441.27predicted protein [Ostreococcus lucimarinus CCE990... [more]
XP_002506194.12.400e-6346.60malate dehydrogenase (, partial [Micromonas commod... [more]
OGU10605.19.100e-6341.89hypothetical protein A2075_04370 [Geobacteraceae b... [more]
XP_007513038.11.500e-6240.66ureidoglycolate dehydrogenase [Bathycoccus prasino... [more]
XP_003083014.12.600e-6239.01Malate/L-lactate dehydrogenase [Ostreococcus tauri... [more]
XP_003056705.12.600e-6246.08predicted protein, partial [Micromonas pusilla CCM... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL119nonsL119Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR021ncniR021Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR127ngnoR127Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK010656NSK010656Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO09G01600.1NO09G01600.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|588959gene_4392Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100256g6gene2934Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO09G01600.1NO09G01600.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO09G01600 ID=NO09G01600|Name=NO09G01600|organism=Nannochloropsis oceanica|type=gene|length=1586bp
AAAATCTATCCACTCAGACAAAGGAGAGAGATTTCTAGGACACGATTGCC
AGTACAAAAATGGAATTGAGCTCATATTCTCGAAGAGTGTTGCCCGGAGA
CAGGCCACACCCCTCCGCTCGACGGACGTCGCGACCATTTTTGGGCGATC
ACAAAAACCAGCGATGGCCCGTTGATCATCCCTCCGTCCCAGTGCCACTG
TGACGCCTTGGCCGTCCCACCACCACCAGCATACCTCCACACTTGTCCCT
CTCTCCTCTTCCTTCCAGTCGTAATCGTACTCTTCCACACGATTCTAGGC
GCTATGCCGCAGACGCGTAAGGAAGAGGTCGAGATGGACGTGAGCGAGCT
GGAGGCCATGACACAGCGTCTTCTCCAGCGGTCTTTGGGGTACGATGCGC
AAGCAGCAGCCCTCATTATGCGTGTGCTTCTCTATGCACAGATGCGAGGT
AACAGTCAGGGTGTCATCAAGCTTCTTACAGGGGGTGTCCCGGCTTACGA
AGCTTCTAAAGGCACGCCAATCGAAGTCGAGCACGAGACAAAGCTTTCCG
CCCGGCTTCACGGACATGGCACCTCGGGGATGCTTGTCCTCGACCGTGCC
GTTACCATGGCGATCACCAAGGCGAAAGATCATGGCTTGAGTATGGTGGC
CGCGCACGGAACTTCTTCGGGGACCGGTGCCATTGGATTCTTTGCGCGCA
CCATGGCCGATGCCGGCTTGGTGGGTATTGTCTTGTCGCAAAGTCCCGAG
TTGATGGCCCCGCATGGGTCGTACGAACCGATTTTTGGGACCAATCCTTT
CTCTGTCGGCATACCCCGGGAAGATGGTGCCTCCCCCCTGGTGCTGGACA
TGGCTACCTCTGCTTATGCATGGTATGCCCTGAAGGAAGCACAGGCGGCA
GGACATGCTATTCCTCCCGATGTGGCGTTTGACGCGAGGGGGAGACCGAC
CACAGATCCAAGCGAGGCCCTCGCGGGGGCGCTGCGAGTGTTTGACCGTT
CTTATAAAGGGAGTCATATTGCCTTGATGGTCGAGATTTTGGGCGGTGCT
TTGGCGGGGGGCGATGTGGAAGAGAAGTGGGCGAGGGGGAACTGGGGTAA
CCTGGTGTTGGCGATCGACCCTGAAGTTCTTGGGCAGTCGTTGGGGGCGT
TTACAGCGAAAGTGGAAGCGGTAGTGAGGAGGGTGAAGGAGGCCAAGCCT
GTGCCCTCTTCAATGACGATGGAGAAAGGTGAAATCGAGGAAGGCAAGGG
GAAAGGAGCAGCGTCAAGAGTCGGCAGCAGCAGCAGCAGCAGCAGTGGAA
GTGCTCCAGGAGGTCCGTCTTTGCCAGGGGAGAGGAGCGAGGCTCTGGCA
GCGATAGTTTTGAAGAGGGGCCGGATTTGCTTGGAACGGAGTGTTTACGA
GGGGTTGATAAAAGCAGCCGCTGTTACTGAGGCTTGAAGGACCGTAATAG
ATTGAGGGTGTCATTCCTCGGCATAATAGGAAAAATTCGAGAGACAAATA
CACAATCAGACAATGTGAAGAAGGAAATAAGATGAAATATCATCCCCAAA
GTGGAAAGTGAAAGAAATCAAGTCCAGACGCGAGTG
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protein sequence of NO09G01600.1

>NO09G01600.1-protein ID=NO09G01600.1-protein|Name=NO09G01600.1|organism=Nannochloropsis oceanica|type=polypeptide|length=378bp
MPQTRKEEVEMDVSELEAMTQRLLQRSLGYDAQAAALIMRVLLYAQMRGN
SQGVIKLLTGGVPAYEASKGTPIEVEHETKLSARLHGHGTSGMLVLDRAV
TMAITKAKDHGLSMVAAHGTSSGTGAIGFFARTMADAGLVGIVLSQSPEL
MAPHGSYEPIFGTNPFSVGIPREDGASPLVLDMATSAYAWYALKEAQAAG
HAIPPDVAFDARGRPTTDPSEALAGALRVFDRSYKGSHIALMVEILGGAL
AGGDVEEKWARGNWGNLVLAIDPEVLGQSLGAFTAKVEAVVRRVKEAKPV
PSSMTMEKGEIEEGKGKGAASRVGSSSSSSSGSAPGGPSLPGERSEALAA
IVLKRGRICLERSVYEGLIKAAAVTEA*
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Synonyms
Publications