NO09G01510, NO09G01510 (gene) Nannochloropsis oceanica

Overview
NameNO09G01510
Unique NameNO09G01510
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length3964
Alignment locationchr9:475436..479399 -

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Properties
Property NameValue
DescriptionSANT/Myb domain protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr9genomechr9:475436..479399 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
GO:0003677DNA binding
Vocabulary: INTERPRO
TermDefinition
IPR009057Homeodomain-like
IPR017930Myb_dom
IPR001005SANT/Myb
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
Homology
[Close]
BLAST of NO09G01510 vs. NCBI_GenBank
Match: XP_014528164.1 (hypothetical protein JH06_3996 [Blastocystis sp. subtype 4] >KNB44725.1 hypothetical protein JH06_3996 [Blastocystis sp. subtype 4])

HSP 1 Score: 78.2 bits (191), Expect = 1.200e-10
Identity = 35/48 (72.92%), Postives = 39/48 (81.25%), Query Frame = 0 
Query:   18 GRWTTEEHTLFEDGLRKYGKQWKRIAEEIPTRTVVQIRTHAQKYFLKL 66
            GRW+  EH LF  GL+K+GK WK IA EIPTRTVVQ+RTHAQKYF KL
Sbjct:   64 GRWSATEHELFLQGLQKFGKDWKAIANEIPTRTVVQVRTHAQKYFQKL 111
[Close]
BLAST of NO09G01510 vs. NCBI_GenBank
Match: OQS02731.1 (Zinc (Zn2)-Iron (Fe2) Permease (ZIP) Family [Thraustotheca clavata])

HSP 1 Score: 77.8 bits (190), Expect = 1.500e-10
Identity = 34/50 (68.00%), Postives = 40/50 (80.00%), Query Frame = 0 
Query:   18 GRWTTEEHTLFEDGLRKYGKQWKRIAEEIPTRTVVQIRTHAQKYFLKLAK 68
            GRWTTEEH LF DGLRKYG+QW  + + + TR+V QIRTHAQKYF+K  K
Sbjct:  836 GRWTTEEHNLFLDGLRKYGRQWYNVVKLVKTRSVTQIRTHAQKYFVKQEK 885
[Close]
BLAST of NO09G01510 vs. NCBI_GenBank
Match: CBN78551.1 (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 77.4 bits (189), Expect = 2.000e-10
Identity = 44/75 (58.67%), Postives = 52/75 (69.33%), Query Frame = 0 
Query:   16 STGRWTTEEHTLFEDGLRKYGKQWKRIAEEIPTRTVVQIRTHAQKYFLKLAK--------IEPAT--STSIALKP 81
            +TGRWT++EH LF  GL  +GK WK+IA  I TRTVVQIRTHAQKYF KL+K        ++PAT  ST  A KP
Sbjct:   30 NTGRWTSDEHRLFLRGLELHGKGWKQIATLIQTRTVVQIRTHAQKYFQKLSKAQASGTSHLDPATLMSTMDAGKP 104
[Close]
BLAST of NO09G01510 vs. NCBI_GenBank
Match: EWM20081.1 (SANT/Myb domain protein [Nannochloropsis gaditana])

HSP 1 Score: 77.4 bits (189), Expect = 2.000e-10
Identity = 35/51 (68.63%), Postives = 41/51 (80.39%), Query Frame = 0 
Query:   17 TGRWTTEEHTLFEDGLRKYGKQWKRIAEEIPTRTVVQIRTHAQKYFLKLAK 68
            TGRW+  EH  F DGL+K+GK+WKR+A E+ TRTVVQ RTHAQKYF KL K
Sbjct:   61 TGRWSRLEHDRFVDGLKKWGKEWKRVAGEVGTRTVVQTRTHAQKYFQKLQK 111
[Close]
BLAST of NO09G01510 vs. NCBI_GenBank
Match: OQR96951.1 (hypothetical protein ACHHYP_12953 [Achlya hypogyna])

HSP 1 Score: 77.4 bits (189), Expect = 2.000e-10
Identity = 39/66 (59.09%), Postives = 46/66 (69.70%), Query Frame = 0 
Query:   12 EDGSS-------TGRWTTEEHTLFEDGLRKYGKQWKRIAEEIPTRTVVQIRTHAQKYFLKLAKIEP 71
            EDGS+       TGRWT +EH LF +GLR+YGK WK IA  + TRT+VQIRTHAQKY  K  K +P
Sbjct:   68 EDGSTKSNVETHTGRWTKKEHELFLEGLRRYGKSWKHIANLVVTRTLVQIRTHAQKYLQKQNKSKP 133
[Close]
BLAST of NO09G01510 vs. NCBI_GenBank
Match: OQR92706.1 (hypothetical protein ACHHYP_03341 [Achlya hypogyna])

HSP 1 Score: 76.6 bits (187), Expect = 3.400e-10
Identity = 34/53 (64.15%), Postives = 42/53 (79.25%), Query Frame = 0 
Query:   15 SSTGRWTTEEHTLFEDGLRKYGKQWKRIAEEIPTRTVVQIRTHAQKYFLKLAK 68
            SSTGRWTT+E   F +GL  +GK WK+IA  IPTRT++QIRTHAQKYF K+ +
Sbjct:   84 SSTGRWTTDEQEAFVEGLNTHGKDWKKIAAMIPTRTLMQIRTHAQKYFKKMER 136
[Close]
BLAST of NO09G01510 vs. NCBI_GenBank
Match: OQR96303.1 (hypothetical protein THRCLA_07325 [Thraustotheca clavata])

HSP 1 Score: 76.6 bits (187), Expect = 3.400e-10
Identity = 39/68 (57.35%), Postives = 49/68 (72.06%), Query Frame = 0 
Query:    2 ARLKKGYTDEEDGSSTGRWTTEEHTLFEDGLRKYGKQWKRIAEEIPTRTVVQIRTHAQKYFLKLAKIE 70
            A L++  ++E   S +GRW+TEE   F +GL  YGK WK+IA  IPTRT++QIRTHAQKYF KL K E
Sbjct:   44 ANLRESISEE---SVSGRWSTEEQNAFIEGLTLYGKDWKKIALMIPTRTLMQIRTHAQKYFKKLEKEE 108
[Close]
BLAST of NO09G01510 vs. NCBI_GenBank
Match: OQR94054.1 (hypothetical protein THRCLA_08261 [Thraustotheca clavata])

HSP 1 Score: 75.9 bits (185), Expect = 5.800e-10
Identity = 35/71 (49.30%), Postives = 51/71 (71.83%), Query Frame = 0 
Query:   11 EEDGSST---GRWTTEEHTLFEDGLRKYGKQWKRIAEEIPTRTVVQIRTHAQKYFLKLA--KIEPATSTSI 77
            ++D  ST   GRW  EEH LF +GLR YGK WK++A+ +PTR+ VQIRTHAQK+F +++  + +P + T +
Sbjct:  116 DDDSPSTKRGGRWLAEEHQLFLEGLRTYGKNWKKVAQVVPTRSTVQIRTHAQKFFKRMSQERAQPPSPTHL 186
[Close]
BLAST of NO09G01510 vs. NCBI_GenBank
Match: GAX96438.1 (Hypothetical protein PINS_004318 [Pythium insidiosum])

HSP 1 Score: 75.9 bits (185), Expect = 5.800e-10
Identity = 35/67 (52.24%), Postives = 46/67 (68.66%), Query Frame = 0 
Query:    9 TDEEDGSSTGRWTTEEHTLFEDGLRKYGKQWKRIAEEIPTRTVVQIRTHAQKYFLKLAKIEPATSTS 76
            T  + G + GRWT +EH  F  GLR YG++WK++A +I TRT  QIR+HAQKYF KLA+ + A   S
Sbjct:   16 TKSQSGMNGGRWTEQEHQSFLAGLRLYGREWKKVASKIKTRTSAQIRSHAQKYFAKLARDDEARKQS 82
[Close]
BLAST of NO09G01510 vs. NCBI_GenBank
Match: CBJ27465.1 (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 75.5 bits (184), Expect = 7.500e-10
Identity = 36/52 (69.23%), Postives = 41/52 (78.85%), Query Frame = 0 
Query:   16 STGRWTTEEHTLFEDGLRKYGKQWKRIAEEIPTRTVVQIRTHAQKYFLKLAK 68
            +TGRWT +EH LF  GL  +GK WK+IA  I TRTVVQIRTHAQKYF K+AK
Sbjct:    5 NTGRWTYDEHRLFLRGLELHGKGWKKIASLIKTRTVVQIRTHAQKYFQKIAK 56
The following BLAST results are available for this feature:
BLAST of NO09G01510 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
XP_014528164.11.200e-1072.92hypothetical protein JH06_3996 [Blastocystis sp. s... [more]
OQS02731.11.500e-1068.00Zinc (Zn2)-Iron (Fe2) Permease (ZIP) Family [Thrau... [more]
CBN78551.12.000e-1058.67conserved unknown protein [Ectocarpus siliculosus][more]
EWM20081.12.000e-1068.63SANT/Myb domain protein [Nannochloropsis gaditana][more]
OQR96951.12.000e-1059.09hypothetical protein ACHHYP_12953 [Achlya hypogyna... [more]
OQR92706.13.400e-1064.15hypothetical protein ACHHYP_03341 [Achlya hypogyna... [more]
OQR96303.13.400e-1057.35hypothetical protein THRCLA_07325 [Thraustotheca c... [more]
OQR94054.15.800e-1049.30hypothetical protein THRCLA_08261 [Thraustotheca c... [more]
GAX96438.15.800e-1052.24Hypothetical protein PINS_004318 [Pythium insidios... [more]
CBJ27465.17.500e-1069.23conserved unknown protein [Ectocarpus siliculosus][more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL119nonsL119Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR021ncniR021Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR127ngnoR127Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK010643NSK010643Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO09G01510.1NO09G01510.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|23389gene_4401Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100059g24gene2923Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO09G01510.1NO09G01510.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO09G01510 ID=NO09G01510|Name=NO09G01510|organism=Nannochloropsis oceanica|type=gene|length=3964bp
AACCACAGCCGCCGCGGGTAGTACCACCACCACCAGCAGCAGCCAGGTAA
AAGTCCAAAGCCCCGCCACAGGACAGTCCCTGTACACACGACCCACGCCT
CGAGCCCCGCCACACAACCGCAGCCACCAGCTAAAGTGCGTCACCCTCTA
CCCCAGCAGTATCGAATGGCCCGACTCAAGAAGGGCTACACTGATGAAGA
GGATGGGAGCAGTACCGGTCGGTGGACCACGGAGGAGCACACCTTGTTCG
AGGACGGCCTGCGCAAGTACGGCAAGCAGTGGAAGCGGATTGCGGAGGAA
ATCCCTACCCGTACTGTGGTTCAGATTAGAACGCACGCCCAGAAATATTT
CCTGAAGCTGGCCAAAATCGAGCCGGCGACCAGCACATCAATTGCGCTGA
AGCCTCCAAACTCGGCGAACCACCACCACCACCACCACCACATCAGCCAT
GGTGCGTCGTCATCATCCTTTGCACACGGCAGCAGTGGCATTAGCGGGGT
GAGCGTGAGTATGGGAGTGGCGATTGGGGGGGACTTACCCTTGTCGCTGG
CACGTAAGAAGCGATCGGTGGGGAAAAGCACGTACCGCCGTCGTGTGCTC
AGTTTAGATTCTGAGGAGGAAGAGGCGGAGGTTGCCCGCCGGCCCACGAT
GGAGCAAGGGGTGGAGGGGGGGCAGGAGACTGAAGGGGAGGAAGAAGGGT
GGGATAGCGCCCGTGGTGGGTACCAGCGGGGCACCACCCTGACGTCTCGC
GGTCGTGTATCTCGTCCGCCGCCCCACAAGGCTGCTTCGTTCATGTCCCC
CCTCCCTGCCTCCCCCTCCCGTGGCACGGCCACTTTCGGCGACGGGAGCA
GCAGCCATGGGAGCGGGGGCGTGTTTAGGACCAGCAGTAATGGGGGGAGG
AGGCAGCAAAAGCGCTTAAGCCACAGTGATCATGTCGGCAACAACACCAG
CTTCAATTCAGGCAGTCGTCATTCCTCCAGCTCCTCCTTCAGTCACACAC
TATGGAGTGCATTGATGCCCTCAGGCGGCCACCCTACCCTACATGGCCAC
GGGCACCTCCACCAGCACCATCAGGCCACGGGCAGCAGCAGCAACAGCAG
CGGAGGATTGATGGTCAAGATACCTTCGGCGGATGATCATGACGACGAGA
TCGTGTTGGGAGAGGACAGTTTAGGGTTTCCGAGTCTGTTGGATGCGTCG
CACGGGGCAGGGGGAGGGGGAGGACGGGCGACGCAAACTCCGACGTCGGT
CGCGGACTTGTACCCGGGCGTGGTGACGTTCCCGCTGAATATAGTTCATT
CGGTAGGAGAGGAGGAGGGGGGGGTCGAGGAGGAGGAGGAAGACAGGATG
GAGCAGGGGGGAGAGGAAGGAGAGGGGGACGAAGAGGAGGAGGAGGAGGA
GGAGTTGTACACGAATTATCGACCGGAGTACATGCATTGCGTTCCTGTGA
CGATGCAACCGGCAGGTAGCTGCGCTTCCTCAACCACATCCTCGTCCTCA
GCCTCGGCCTCTTCGTCGGGCGCAGCCGGTACAACGGAGGAAGAGGAAGA
GGAGGGCGAGGAGGAGGAGGAGGAGGACACGTTTGCGACGCTCCATGAGT
TGGCAGGGCGAACAGCACCTGACTGGGGGGAGGCGTTGAACGAAGCACTA
GGGGCCTTGGAAGGGGTTGGAGGTACGGGGGTCGGGGGGGTTGGGGGGGG
GGACGAGGGTCATTTACACGCCCATGCGCTGCAGCATGACGAGCGGATGC
ATCACCATCTCCCGCTCCCGCTGCCAACGCCGCCTGCCTTGTCGGCGCCG
GCCCGGGGATTATCGGTGAGTAGCCTGACTGACTCGGGGTCCCACTCCTC
CTCATCTACGGGAAGTTACCTCCCGTCGGATGAAAGCGACGAGGAGAGGA
GCGGCGCGGCTGCTGGTGCTAGGGCTAGGGCTGGCGCCGTGGCAGCTGCT
GGGTTCTTGGAGGGTGGGGAAGCCCCGCCCGCGAAACGGGCGCGCATGAG
CCAGGAAAGGAGGGAGGGAGGGGCAGTGTCGTCGCAATTCGTGAAGGGAT
CTTCCACGGTGCCATTTATGGTGCATGCTGCGGGAGAGGGAGGGAGGGAG
GGAGGGGAGGAAGGGAGGGAGGGCCTGGAGATGGAAGAGGACAGTGACTA
CGGATATTTCACGACGGAGGAGGAATTGGACCACATGCTCTTGAACATGC
TTGATGCTGGCACCAGCGCCTCCACGTGCCCTCCCTCCTCCTCCTCCTCC
TCCTCGGCCTCGGCTGCGGTTACCACAGCGGGGGTCTTGCGTGCGTAAAG
AGGGGAAGGGAGAGAGGGGGGGGAGATGAGTGGGAGAGAGGGAGGGAGAC
ACAAATACACAACCAATTGACTGTCAGGTTCTTTGAGAAGAAACGCATTC
GCGACACAGCAAAAAAGGGAAAATGGAAAATATGAAACGAGAGTACACGT
GAGAGAAATAGAAGAAATAAATGGAGGGAGGGGGGGAAGGAAGGGAGAAA
GGGAGAAAGAGAGGGAGGAAGATGGAGATACCACAGTTTCGTATGTCTCC
CCATCCCACTCCCTTGTGTGTGTGTGTGTTTTGCGGCGTAGAACGCACCT
CTCCTATTCATAAGTCCTCTTTTTACTATCCGTCATATCAATTTTGAAGG
AAGGAAGGAAGGAAGGAAGGGAGGGAGGGATGGAGGAGATGAAGGAAAAC
AGACGAAAGACGTGTAACAACCTCCGTGTCATTTTCATCCTCATGTCCGA
CCACTACTACTACTACTACTAATTCTACGACTACGACTACGACTACGACT
ACTACTACTACTACTACTACTACTACTACTACTCTAATCATCACGGTATA
CCGGTAGTATTTATTCATGAAAAAGTGAGCCAAAAGTTGAAAACGACCAT
CTTAAAAATAATTGAATATCGATGTGAATTCTCCCCGCAACAGCCAATGT
GTTTTTAATCGAGGCGAGGAAGACTGAGAGAGAGAGAGAGAGAGAGAGAG
AGAGAGAGAGAGAGAGAGAGAGAGGGAAGGGGGAGGTTAAGGGAAGAGGT
GGAGAAAGAGGAAAGAAGAATGGGAGATTCGATCTTGAACGTTCACCCCT
CTAACGTGGAGAGGGAAGGAAAGGGGAGAGGAAAGAAACGAGGGAGGGAG
GATGGTATCCTCTGCCTTGTGTTCTTTCGGCGTGATGTTTTTGAATGAGG
AGGAGAGAACGACGATGATGCTGAAGAGACAGAAGACGAGGAAGGCCGTG
GTGACGATAATTCCGATGAAGTAGGGTCGAGCGAGTGGGAAAGTGTGCGT
GTATTTTCTTTTGTGTCCATGCTTGTCTGGTACCCCTCTCTTTGATGGGG
GTCGGCTGTGTATGTGTATGATCTCGTGTATGTGTCTGTGTGGGTTTGTG
GGGTCTTGTGTGTGTGTCTGATGTCATCGTATTCGTCGTGACCTATAAAA
AGGATGCGCGCGTGCCTGAGACGACGACGAAGGTCGTCAGAGAACGGCAT
AGAATAAATGATGGGATGGGAGGGACGGTGCACACGGGAGAAGAACATAC
AAGGAGAAGGGCAGGGTACACACAGGCTTACGAGACAATGATGGAGAAGA
AATGAAAAAGAAAGAAGAAGAGGAAGAGGCAGAGAAAAAATGAGGAAGAG
CAAGAGAGAGAGGAAGAAGGAAAAGATGTGCAAGACCGTGCAAGCGAGAA
CAAGAAGAAGGACGACAAGACGATGAAGCAGAAGCAAGAGAACGAGAAGA
GATCGAAAAACGTCATACATCATCCACAACAGATGGAGAGGGAGAGAGGG
AGACCTACGAATTGAAACCAACAACAATAAAGACGATAAACGCACGCATG
TCACCAAAAATCACGGGACTGGGAAGGGAAACACCCAATAGAAAAGAATA
AAGACGATCCTGCAGGAAACAAGCTCAATATACATGCCGTCTTGCTCTCT
TCTCTCTGCCCAAC
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protein sequence of NO09G01510.1

>NO09G01510.1-protein ID=NO09G01510.1-protein|Name=NO09G01510.1|organism=Nannochloropsis oceanica|type=polypeptide|length=711bp
MARLKKGYTDEEDGSSTGRWTTEEHTLFEDGLRKYGKQWKRIAEEIPTRT
VVQIRTHAQKYFLKLAKIEPATSTSIALKPPNSANHHHHHHHISHGASSS
SFAHGSSGISGVSVSMGVAIGGDLPLSLARKKRSVGKSTYRRRVLSLDSE
EEEAEVARRPTMEQGVEGGQETEGEEEGWDSARGGYQRGTTLTSRGRVSR
PPPHKAASFMSPLPASPSRGTATFGDGSSSHGSGGVFRTSSNGGRRQQKR
LSHSDHVGNNTSFNSGSRHSSSSSFSHTLWSALMPSGGHPTLHGHGHLHQ
HHQATGSSSNSSGGLMVKIPSADDHDDEIVLGEDSLGFPSLLDASHGAGG
GGGRATQTPTSVADLYPGVVTFPLNIVHSVGEEEGGVEEEEEDRMEQGGE
EGEGDEEEEEEEELYTNYRPEYMHCVPVTMQPAGSCASSTTSSSSASASS
SGAAGTTEEEEEEGEEEEEEDTFATLHELAGRTAPDWGEALNEALGALEG
VGGTGVGGVGGGDEGHLHAHALQHDERMHHHLPLPLPTPPALSAPARGLS
VSSLTDSGSHSSSSTGSYLPSDESDEERSGAAAGARARAGAVAAAGFLEG
GEAPPAKRARMSQERREGGAVSSQFVKGSSTVPFMVHAAGEGGREGGEEG
REGLEMEEDSDYGYFTTEEELDHMLLNMLDAGTSASTCPPSSSSSSSASA
AVTTAGVLRA*
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Synonyms
Publications