NO09G01510, NO09G01510 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO09G01510 vs. NCBI_GenBank
Match: EWM27658.1 (SANT/Myb domain protein [Nannochloropsis gaditana]) HSP 1 Score: 248.8 bits (634), Expect = 5.000e-62 Identity = 245/541 (45.29%), Postives = 283/541 (52.31%), Query Frame = 0 Query: 1 MARLKKGYTDEEDGSSTGRWTTEEHTLFEDGLRKYGKQWKRIAEEIPTRTVVQIRTHAQKYFLKLAKIEPATSTSIALKPXXXXXXXXXXXXXXXXXXXXXXA------HGSSGISGVSVSMGVAIGG---DLPLSLARKKRSVGKSTYRRRVLSLDSEEEEAEVARRPTMEQGVEGGQETEGEEEGWDSARGGYQRGTTLTSRGRVSRPPPHKAASFMSPLPASPS----RGTATFGDG-SSSH-------GSGGVFRTSSNGGRRQQK-RLSHSDHVGNNTSFNSGSRHSSSSSFSHTLWSALMPSGGHPT--------LHGXXXXXXXXXXXXXXXXXXGGLMVKIPSADDH-----DDEIVLGEDSLGFPSLLDASHGAGGGGGRATQTPTSVADLYPGVVTFPLNI---VHSVGEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYTNYRPEYMHCVPVTMQPAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFATLHELAGRTAPDWGEALNEALGALEGVGG 504 MAR KKGY DEE+GS+TGRWTTEEH LFEDGLRKYGKQWKRIAEEIP+RTVVQIRTHAQKYFLKLAKIEPATSTSIALKP A + S+G V M ++ G DLPLSL RKKRSVGKSTYRR V LD +E E E+ + EG E +E G R +TLTSRGRVSRPP +K S P+SP+ RG FG G +SH +G R R+QQK R + + N SGS SS+SS +H++W AL S PT G GGLMV+IP ++H D+ GE + F SL + G G TQTPTSV LYP + FP + VH E + RP+YM VP ++Q G XXXXXXXXXXXXXXXXXXXXXXXXXX F+ LHELAGR APDW +A EALGALEG G Sbjct: 1 MARPKKGYMDEEEGSTTGRWTTEEHALFEDGLRKYGKQWKRIAEEIPSRTVVQIRTHAQKYFLKLAKIEPATSTSIALKPPTNHNQFYPHVHAHNHGLHSNAAFTSLTGYPSNGNGNVGPDMELSGQGSSMDLPLSLTRKKRSVGKSTYRRLVPGLDGDEMEEEIGCFEADKLEKEGDGINEEDE-------GCPFRSSTLTSRGRVSRPPRNK--STFPSHPSSPAGIGMRGEG-FGSGIDTSHTTLEGIPQNGASARAVGTALRKQQKQRARRTAPLEQNGLRGSGSVFSSASSLTHSIWGALHTSSTDPTPSSLQSLPPRGLMNAEDSGCRPGAGVGPAGGLMVRIPMGEEHALDMEDNLFAAGELNGLFESLRE-----GALVGAPTQTPTSVMHLYPDMDDFPDAMGAHVHGPEEDGKGEGKRERVGGANEALPG--------------SDRPDYMLGVPGSLQSTG----CXXXXXXXXXXXXXXXXXXXXXXXXXXLGEGEDAFSHLHELAGRGAPDWADAFEEALGALEGAEG 508
BLAST of NO09G01510 vs. NCBI_GenBank
Match: GBG32437.1 (Myb family DNA-binding protein, SHAQKYF family [Aurantiochytrium sp. FCC1311]) HSP 1 Score: 81.6 bits (200), Expect = 1.000e-11 Identity = 37/54 (68.52%), Postives = 45/54 (83.33%), Query Frame = 0 Query: 14 GSSTGRWTTEEHTLFEDGLRKYGKQWKRIAEEIPTRTVVQIRTHAQKYFLKLAK 68 G +TGRWT EEHT F +GL+ +GK+WK+I+ I +RTVVQIRTHAQKYF KLAK Sbjct: 48 GENTGRWTKEEHTKFLEGLKLHGKEWKKISNMIDSRTVVQIRTHAQKYFQKLAK 101
BLAST of NO09G01510 vs. NCBI_GenBank
Match: XP_002184266.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >EEC44444.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 80.9 bits (198), Expect = 1.800e-11 Identity = 40/67 (59.70%), Postives = 46/67 (68.66%), Query Frame = 0 Query: 1 MARLKKGYTDEEDGSSTGRWTTEEHTLFEDGLRKYGKQWKRIAEEIPTRTVVQIRTHAQKYFLKLAK 68 MA + G +TGRWT EEH LF GL ++GK WK+IA I +RTVVQIRTHAQKYF KLAK Sbjct: 101 MATASGSASQGSHGENTGRWTAEEHRLFLQGLEQHGKGWKKIASLIKSRTVVQIRTHAQKYFQKLAK 167
BLAST of NO09G01510 vs. NCBI_GenBank
Match: XP_002184267.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >EEC44445.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 80.9 bits (198), Expect = 1.800e-11 Identity = 40/67 (59.70%), Postives = 46/67 (68.66%), Query Frame = 0 Query: 1 MARLKKGYTDEEDGSSTGRWTTEEHTLFEDGLRKYGKQWKRIAEEIPTRTVVQIRTHAQKYFLKLAK 68 MA + G +TGRWT EEH LF GL ++GK WK+IA I +RTVVQIRTHAQKYF KLAK Sbjct: 101 MATASGSASQGSHGENTGRWTAEEHRLFLQGLEQHGKGWKKIASLIKSRTVVQIRTHAQKYFQKLAK 167
BLAST of NO09G01510 vs. NCBI_GenBank
Match: GAX28359.1 (protein MYSM1 [Fistulifera solaris]) HSP 1 Score: 80.9 bits (198), Expect = 1.800e-11 Identity = 38/54 (70.37%), Postives = 43/54 (79.63%), Query Frame = 0 Query: 14 GSSTGRWTTEEHTLFEDGLRKYGKQWKRIAEEIPTRTVVQIRTHAQKYFLKLAK 68 G +TGRWT EEH LF GL ++GK WK+IA I +RTVVQIRTHAQKYF KLAK Sbjct: 96 GENTGRWTAEEHRLFLQGLEQHGKGWKKIASLIKSRTVVQIRTHAQKYFQKLAK 149
BLAST of NO09G01510 vs. NCBI_GenBank
Match: GAX24276.1 (protein MYSM1 [Fistulifera solaris]) HSP 1 Score: 80.9 bits (198), Expect = 1.800e-11 Identity = 38/54 (70.37%), Postives = 43/54 (79.63%), Query Frame = 0 Query: 14 GSSTGRWTTEEHTLFEDGLRKYGKQWKRIAEEIPTRTVVQIRTHAQKYFLKLAK 68 G +TGRWT EEH LF GL ++GK WK+IA I +RTVVQIRTHAQKYF KLAK Sbjct: 95 GENTGRWTAEEHRLFLQGLEQHGKGWKKIASLIKSRTVVQIRTHAQKYFQKLAK 148
BLAST of NO09G01510 vs. NCBI_GenBank
Match: XP_002292776.1 (predicted protein [Thalassiosira pseudonana CCMP1335] >EED89972.1 predicted protein [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 79.3 bits (194), Expect = 5.200e-11 Identity = 38/63 (60.32%), Postives = 45/63 (71.43%), Query Frame = 0 Query: 16 STGRWTTEEHTLFEDGLRKYGKQWKRIAEEIPTRTVVQIRTHAQKYFLKLAKIEPATSTSIAL 79 +TGRWT EEH LF GL ++GK WK+IA I +RTVVQIRTHAQKYF KLAK + I + Sbjct: 417 NTGRWTAEEHRLFLQGLEQHGKGWKKIAGLIKSRTVVQIRTHAQKYFQKLAKARAGDGSGIPM 479
BLAST of NO09G01510 vs. NCBI_GenBank
Match: EWM30452.1 (SANT/Myb domain protein [Nannochloropsis gaditana]) HSP 1 Score: 79.0 bits (193), Expect = 6.800e-11 Identity = 39/57 (68.42%), Postives = 43/57 (75.44%), Query Frame = 0 Query: 11 EEDGSSTGRWTTEEHTLFEDGLRKYGKQWKRIAEEIPTRTVVQIRTHAQKYFLKLAK 68 E +TGRWT EEH LF GL +GK WK+IA+ I TRTVVQIRTHAQKYF KLAK Sbjct: 94 ETGRENTGRWTCEEHVLFLKGLEMHGKGWKKIAKLIKTRTVVQIRTHAQKYFQKLAK 150
BLAST of NO09G01510 vs. NCBI_GenBank
Match: GBG31880.1 (Myb family DNA-binding protein, SHAQKYF family [Aurantiochytrium sp. FCC1311]) HSP 1 Score: 79.0 bits (193), Expect = 6.800e-11 Identity = 43/86 (50.00%), Postives = 55/86 (63.95%), Query Frame = 0 Query: 5 KKGYTDEEDGS-------------STGRWTTEEHTLFEDGLRKYGKQWKRIAEEIPTRTVVQIRTHAQKYFLKLAKIE--PATSTS 76 K Y DEE + + GRWT EEH++F +GL+ +GK+WK+I++ I TRTVVQIRTHAQKYF K+AK P STS Sbjct: 4 KASYDDEESEALAKXXXXXXXSFINAGRWTHEEHSIFLEGLKLHGKEWKKISDMIQTRTVVQIRTHAQKYFQKVAKSTGGPVMSTS 89
BLAST of NO09G01510 vs. NCBI_GenBank
Match: EJK60893.1 (hypothetical protein THAOC_18691 [Thalassiosira oceanica]) HSP 1 Score: 78.6 bits (192), Expect = 8.900e-11 Identity = 37/52 (71.15%), Postives = 42/52 (80.77%), Query Frame = 0 Query: 16 STGRWTTEEHTLFEDGLRKYGKQWKRIAEEIPTRTVVQIRTHAQKYFLKLAK 68 +TGRWT EEH LF GL ++GK WK+IA I +RTVVQIRTHAQKYF KLAK Sbjct: 309 NTGRWTAEEHRLFLQGLERHGKGWKKIATLIKSRTVVQIRTHAQKYFQKLAK 360 The following BLAST results are available for this feature:
BLAST of NO09G01510 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO09G01510 ID=NO09G01510|Name=NO09G01510|organism=Nannochloropsis oceanica|type=gene|length=3964bpback to top protein sequence of NO09G01510.1 >NO09G01510.1-protein ID=NO09G01510.1-protein|Name=NO09G01510.1|organism=Nannochloropsis oceanica|type=polypeptide|length=711bpback to top Synonyms
Publications
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