NO09G01320, NO09G01320 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO09G01320 vs. NCBI_GenBank
Match: EWM27640.1 (rab gtpase [Nannochloropsis gaditana]) HSP 1 Score: 400.2 bits (1027), Expect = 3.800e-108 Identity = 195/202 (96.53%), Postives = 201/202 (99.50%), Query Frame = 0 Query: 1 MARQENPFDMQIKLLMIGDSGVGKTCLLLRYANDSFSPTFITTIGIDFKIKNLELDGKRIKLQIWDTAGQERFRTITTSYFRGAQGILLVYDVTDRRSFESIRNWVGQIQQHADVHVNKILIGNKCDMTPQRVVTTEEGQSLANDFGIQFFETSAKNDVNVEKSFVTIAREVKNRMLVDGGPRATGGKAIVDAKKGSDAKKC 203 MARQENPFDMQIKLLMIGDSGVGKTCLLLRYANDSFSPTFITTIGIDFKIKNLELDG+RIKLQIWDTAGQERFRTITTSYFRGAQGILLVYDVTDRRSFESIRNWVGQIQQHADVHVNKILIGNKCDMTPQRVV+TEEGQSLANDFGIQFFETSAKND+NVEKSFVTIAREVKNRMLVDGGPRATGGKAIVDAK+ ++AKKC Sbjct: 1 MARQENPFDMQIKLLMIGDSGVGKTCLLLRYANDSFSPTFITTIGIDFKIKNLELDGRRIKLQIWDTAGQERFRTITTSYFRGAQGILLVYDVTDRRSFESIRNWVGQIQQHADVHVNKILIGNKCDMTPQRVVSTEEGQSLANDFGIQFFETSAKNDINVEKSFVTIAREVKNRMLVDGGPRATGGKAIVDAKRSNEAKKC 202
BLAST of NO09G01320 vs. NCBI_GenBank
Match: XP_002906701.1 (Rab8 family GTPase, putative [Phytophthora infestans T30-4] >EEY66102.1 Rab8 family GTPase, putative [Phytophthora infestans T30-4]) HSP 1 Score: 333.6 bits (854), Expect = 4.400e-88 Identity = 160/203 (78.82%), Postives = 180/203 (88.67%), Query Frame = 0 Query: 1 MARQENPFDMQIKLLMIGDSGVGKTCLLLRYANDSFSPTFITTIGIDFKIKNLELDGKRIKLQIWDTAGQERFRTITTSYFRGAQGILLVYDVTDRRSFESIRNWVGQIQQHADVHVNKILIGNKCDMTPQRVVTTEEGQSLANDFGIQFFETSAKNDVNVEKSFVTIAREVKNRMLVDGGPRATGGKAIVDAKKGSDAKKCC 204 MAR ENPFDMQIKLLMIGDSGVGKTCLLLRYANDSFSPTFITTIGIDFKIKN+ELD K++KLQIWDTAGQERFRTITTSYFRGAQGILLVYDVTDR SF+SIRNWVGQIQQHADVHVNKILIGNKCDMT +VV+TEEGQ+LA+++G++FFETSAKN++NVE F+ IAREVKNR++ +GGP ++AK K CC Sbjct: 1 MARHENPFDMQIKLLMIGDSGVGKTCLLLRYANDSFSPTFITTIGIDFKIKNIELDNKKVKLQIWDTAGQERFRTITTSYFRGAQGILLVYDVTDRASFQSIRNWVGQIQQHADVHVNKILIGNKCDMTDDKVVSTEEGQALADEYGVKFFETSAKNNINVEGGFIEIAREVKNRLMEEGGPHKK-DSVNLNAKPAPVKKSCC 202
BLAST of NO09G01320 vs. NCBI_GenBank
Match: XP_008907445.1 (hypothetical protein PPTG_13487 [Phytophthora parasitica INRA-310] >XP_008907446.1 hypothetical protein, variant [Phytophthora parasitica INRA-310] >XP_009515766.1 hypothetical protein PHYSODRAFT_353544 [Phytophthora sojae] >EGZ28491.1 hypothetical protein PHYSODRAFT_353544 [Phytophthora sojae] >ETI43825.1 hypothetical protein F443_11412 [Phytophthora parasitica P1569] >ETI43826.1 hypothetical protein, variant [Phytophthora parasitica P1569] >ETK83797.1 hypothetical protein L915_11102 [Phytophthora parasitica] >ETK83798.1 hypothetical protein, variant [Phytophthora parasitica] >ETL37213.1 hypothetical protein L916_11000 [Phytophthora parasitica] >ETL37214.1 hypothetical protein, variant [Phytophthora parasitica] >ETL90445.1 hypothetical protein L917_10909 [Phytophthora parasitica] >ETM43749.1 hypothetical protein L914_10935 [Phytophthora parasitica] >ETM43750.1 hypothetical protein, variant [Phytophthora parasitica] >ETN07069.1 hypothetical protein PPTG_13487 [Phytophthora parasitica INRA-310] >ETN07070.1 hypothetical protein, variant [Phytophthora parasitica INRA-310] >ETO72501.1 hypothetical protein F444_11482 [Phytophthora parasitica P1976] >ETO72502.1 hypothetical protein, variant [Phytophthora parasitica P1976] >ETP13636.1 hypothetical protein F441_11329 [Phytophthora parasitica CJ01A1] >ETP13637.1 hypothetical protein, variant [Phytophthora parasitica CJ01A1] >ETP41699.1 hypothetical protein F442_11297 [Phytophthora parasitica P10297] >ETP41700.1 hypothetical protein, variant [Phytophthora parasitica P10297] >KUF64898.1 Ras-related protein Rab-8A [Phytophthora nicotianae] >KUF96380.1 hypothetical protein AM588_10011375 [Phytophthora nicotianae]) HSP 1 Score: 332.8 bits (852), Expect = 7.500e-88 Identity = 160/203 (78.82%), Postives = 180/203 (88.67%), Query Frame = 0 Query: 1 MARQENPFDMQIKLLMIGDSGVGKTCLLLRYANDSFSPTFITTIGIDFKIKNLELDGKRIKLQIWDTAGQERFRTITTSYFRGAQGILLVYDVTDRRSFESIRNWVGQIQQHADVHVNKILIGNKCDMTPQRVVTTEEGQSLANDFGIQFFETSAKNDVNVEKSFVTIAREVKNRMLVDGGPRATGGKAIVDAKKGSDAKKCC 204 MAR ENPFDMQIKLLMIGDSGVGKTCLLLRYANDSFSPTFITTIGIDFKIKN+ELD K++KLQIWDTAGQERFRTITTSYFRGAQGILLVYDVTDR SF+SIRNWVGQIQQHADVHVNKILIGNKCDMT +VV+TEEGQ+LA+++G++FFETSAKN++NVE F+ IAREVKNR++ +GGP ++AK K CC Sbjct: 1 MARHENPFDMQIKLLMIGDSGVGKTCLLLRYANDSFSPTFITTIGIDFKIKNIELDNKKVKLQIWDTAGQERFRTITTSYFRGAQGILLVYDVTDRASFQSIRNWVGQIQQHADVHVNKILIGNKCDMTDDKVVSTEEGQALADEYGVKFFETSAKNNINVEGGFIEIAREVKNRLMEEGGPHKK-DSVNLNAKPAPVKKGCC 202
BLAST of NO09G01320 vs. NCBI_GenBank
Match: GAY01129.1 (Rab8 family GTPase, putative [Pythium insidiosum]) HSP 1 Score: 331.6 bits (849), Expect = 1.700e-87 Identity = 159/203 (78.33%), Postives = 178/203 (87.68%), Query Frame = 0 Query: 1 MARQENPFDMQIKLLMIGDSGVGKTCLLLRYANDSFSPTFITTIGIDFKIKNLELDGKRIKLQIWDTAGQERFRTITTSYFRGAQGILLVYDVTDRRSFESIRNWVGQIQQHADVHVNKILIGNKCDMTPQRVVTTEEGQSLANDFGIQFFETSAKNDVNVEKSFVTIAREVKNRMLVDGGPRATGGKAIVDAKKGSDAKKCC 204 MAR ENPFDMQIKLLMIGDSGVGKTCLLLRYANDSFSPTFITTIGIDFKIKN+ELD K++KLQIWDTAGQERFRTITTSYFRGAQGILLVYDVTDR SF+SIRNWVGQIQQHADVHVNKILIGNKCDMT +VV+TEEGQ+LA+++G++FFETSAKN++NVE F+ IAREVKNR++ +GGP + K K CC Sbjct: 1 MARHENPFDMQIKLLMIGDSGVGKTCLLLRYANDSFSPTFITTIGIDFKIKNIELDNKKVKLQIWDTAGQERFRTITTSYFRGAQGILLVYDVTDRASFQSIRNWVGQIQQHADVHVNKILIGNKCDMTDDKVVSTEEGQALADEYGVKFFETSAKNNINVESGFIEIAREVKNRLMEEGGPHKKDNVNLT-TKPPQGKKGCC 202
BLAST of NO09G01320 vs. NCBI_GenBank
Match: XP_008872111.1 (hypothetical protein H310_08215 [Aphanomyces invadans] >ETV99555.1 hypothetical protein H310_08215 [Aphanomyces invadans]) HSP 1 Score: 329.7 bits (844), Expect = 6.300e-87 Identity = 156/201 (77.61%), Postives = 177/201 (88.06%), Query Frame = 0 Query: 1 MARQENPFDMQIKLLMIGDSGVGKTCLLLRYANDSFSPTFITTIGIDFKIKNLELDGKRIKLQIWDTAGQERFRTITTSYFRGAQGILLVYDVTDRRSFESIRNWVGQIQQHADVHVNKILIGNKCDMTPQRVVTTEEGQSLANDFGIQFFETSAKNDVNVEKSFVTIAREVKNRMLVDGGPRATGGKAIVDAKKGSDAKK 202 MAR ENPFDMQIKLLMIGDSGVGKTCLLLRYANDSFSPTFITTIGIDFK+KN++LDGK+IKLQIWDTAGQERFRTITTSYFRGAQGILLVYDVTDR SF SIRNWVGQIQQHADVHVNKIL+GNKCDM +VV+TEEGQ+LA+++G++FFETSAKN++NVE F+ IA EVK R++ +GGP + KKG+D K Sbjct: 1 MARNENPFDMQIKLLMIGDSGVGKTCLLLRYANDSFSPTFITTIGIDFKVKNIDLDGKKIKLQIWDTAGQERFRTITTSYFRGAQGILLVYDVTDRASFNSIRNWVGQIQQHADVHVNKILVGNKCDMLDDKVVSTEEGQALADEYGVKFFETSAKNNINVEGGFIEIANEVKTRLMEEGGPHKKSDLVVNLGKKGNDPTK 201
BLAST of NO09G01320 vs. NCBI_GenBank
Match: XP_008614250.1 (rab family, other [Saprolegnia diclina VS20] >EQC32309.1 rab family, other [Saprolegnia diclina VS20] >OQR85584.1 Rab8 family GTPase [Achlya hypogyna]) HSP 1 Score: 329.3 bits (843), Expect = 8.300e-87 Identity = 161/207 (77.78%), Postives = 180/207 (86.96%), Query Frame = 0 Query: 1 MARQENPFDMQIKLLMIGDSGVGKTCLLLRYANDSFSPTFITTIGIDFKIKNLELDGKRIKLQIWDTAGQERFRTITTSYFRGAQGILLVYDVTDRRSFESIRNWVGQIQQHADVHVNKILIGNKCDMTPQRVVTTEEGQSLANDFGIQFFETSAKNDVNVEKSFVTIAREVKNRMLVDGGPR----ATGGKAIVDAKKGSDAKKCC 204 MAR ENPFDMQIKLLMIGDSGVGKTCLLLRYANDSFSPTFITTIGIDFK+KN+ELDGK+IKLQIWDTAGQERFRTITTSYFRGAQGILLVYDVTDR SF SIRNWVGQIQQHADVHVNKIL+GNKCDM +VV+TEEGQ+LA+++G++FFETSAKN++NVE F+ IA EVK R++ +GGP G A A KG +AK CC Sbjct: 1 MARNENPFDMQIKLLMIGDSGVGKTCLLLRYANDSFSPTFITTIGIDFKVKNIELDGKKIKLQIWDTAGQERFRTITTSYFRGAQGILLVYDVTDRASFNSIRNWVGQIQQHADVHVNKILVGNKCDMLDDKVVSTEEGQALADEYGVKFFETSAKNNINVESGFIEIANEVKTRLMEEGGPHKKEIVNLGGAKTAAAKG-NAKGCC 206
BLAST of NO09G01320 vs. NCBI_GenBank
Match: XP_009827350.1 (hypothetical protein H257_04507 [Aphanomyces astaci] >ETV83920.1 hypothetical protein H257_04507 [Aphanomyces astaci]) HSP 1 Score: 328.6 bits (841), Expect = 1.400e-86 Identity = 156/198 (78.79%), Postives = 176/198 (88.89%), Query Frame = 0 Query: 1 MARQENPFDMQIKLLMIGDSGVGKTCLLLRYANDSFSPTFITTIGIDFKIKNLELDGKRIKLQIWDTAGQERFRTITTSYFRGAQGILLVYDVTDRRSFESIRNWVGQIQQHADVHVNKILIGNKCDMTPQRVVTTEEGQSLANDFGIQFFETSAKNDVNVEKSFVTIAREVKNRMLVDGGPRATGGKAIVDAKKGSD 199 MAR ENPFDMQIKLLMIGDSGVGKTCLLLRYANDSFSPTFITTIGIDFK+KN++LDGK+IKLQIWDTAGQERFRTITTSYFRGAQGILLVYDVTDR SF SIRNWVGQIQQHADVHVNKIL+GNKCDM +VV+TEEGQ+LA+++GI+FFETSAKN++NVE F+ IA EVK R++ +GGP + KKGS+ Sbjct: 1 MARNENPFDMQIKLLMIGDSGVGKTCLLLRYANDSFSPTFITTIGIDFKVKNIDLDGKKIKLQIWDTAGQERFRTITTSYFRGAQGILLVYDVTDRASFNSIRNWVGQIQQHADVHVNKILVGNKCDMLDDKVVSTEEGQALADEYGIKFFETSAKNNINVEGGFIEIANEVKTRLMEEGGPHKKNDLVVNLGKKGSN 198
BLAST of NO09G01320 vs. NCBI_GenBank
Match: CCI50023.1 (unnamed protein product [Albugo candida]) HSP 1 Score: 328.6 bits (841), Expect = 1.400e-86 Identity = 154/181 (85.08%), Postives = 173/181 (95.58%), Query Frame = 0 Query: 1 MARQENPFDMQIKLLMIGDSGVGKTCLLLRYANDSFSPTFITTIGIDFKIKNLELDGKRIKLQIWDTAGQERFRTITTSYFRGAQGILLVYDVTDRRSFESIRNWVGQIQQHADVHVNKILIGNKCDMTPQRVVTTEEGQSLANDFGIQFFETSAKNDVNVEKSFVTIAREVKNRMLVDGG 182 MAR ENPFDMQIKLLMIGDSGVGKTCLLLRYANDSFSPTFITTIGIDFKIKN+ELDGK+IKLQIWDTAGQERFRTITTSYFRGAQGILLVYDVTDR SF+SIRNWVGQIQQHADVHVNKILIGNKCDMT +V++TEEGQ+LA+++G++F+ETSAKN++NVE F+ IAREVKNR++ +GG Sbjct: 1 MARHENPFDMQIKLLMIGDSGVGKTCLLLRYANDSFSPTFITTIGIDFKIKNIELDGKKIKLQIWDTAGQERFRTITTSYFRGAQGILLVYDVTDRASFQSIRNWVGQIQQHADVHVNKILIGNKCDMTDDKVISTEEGQALADEYGVRFYETSAKNNINVEGGFIDIAREVKNRLMEEGG 181
BLAST of NO09G01320 vs. NCBI_GenBank
Match: XP_012210283.1 (hypothetical protein SPRG_15745 [Saprolegnia parasitica CBS 223.65] >KDO18996.1 hypothetical protein SPRG_15745 [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 328.2 bits (840), Expect = 1.800e-86 Identity = 160/207 (77.29%), Postives = 180/207 (86.96%), Query Frame = 0 Query: 1 MARQENPFDMQIKLLMIGDSGVGKTCLLLRYANDSFSPTFITTIGIDFKIKNLELDGKRIKLQIWDTAGQERFRTITTSYFRGAQGILLVYDVTDRRSFESIRNWVGQIQQHADVHVNKILIGNKCDMTPQRVVTTEEGQSLANDFGIQFFETSAKNDVNVEKSFVTIAREVKNRMLVDGGPR----ATGGKAIVDAKKGSDAKKCC 204 MAR ENPFDMQIKLLMIGDSGVGKTCLLLRYANDSFSPTFITTIGIDFK+KN++LDGK+IKLQIWDTAGQERFRTITTSYFRGAQGILLVYDVTDR SF SIRNWVGQIQQHADVHVNKIL+GNKCDM +VV+TEEGQ+LA+++G++FFETSAKN++NVE F+ IA EVK R++ +GGP G A A KG +AK CC Sbjct: 1 MARNENPFDMQIKLLMIGDSGVGKTCLLLRYANDSFSPTFITTIGIDFKVKNIDLDGKKIKLQIWDTAGQERFRTITTSYFRGAQGILLVYDVTDRASFNSIRNWVGQIQQHADVHVNKILVGNKCDMLDDKVVSTEEGQALADEYGVKFFETSAKNNINVESGFIEIANEVKTRLMEEGGPHKKEIVNLGGAKTAAAKG-NAKGCC 206
BLAST of NO09G01320 vs. NCBI_GenBank
Match: OQR81313.1 (Rab8 family GTPase [Thraustotheca clavata]) HSP 1 Score: 327.0 bits (837), Expect = 4.100e-86 Identity = 158/208 (75.96%), Postives = 178/208 (85.58%), Query Frame = 0 Query: 1 MARQENPFDMQIKLLMIGDSGVGKTCLLLRYANDSFSPTFITTIGIDFKIKNLELDGKRIKLQIWDTAGQERFRTITTSYFRGAQGILLVYDVTDRRSFESIRNWVGQIQQHADVHVNKILIGNKCDMTPQRVVTTEEGQSLANDFGIQFFETSAKNDVNVEKSFVTIAREVKNRMLVDGGPRA-----TGGKAIVDAKKGSDAKKCC 204 MAR ENPFDMQIKLLMIGDSGVGKTCLLLRYANDSFSPTFITTIGIDFK+KN++LDGK+IKLQIWDTAGQERFRTITTSYFRGAQGILLVYDVTDR SF SIRNWVGQIQQHADVHVNKIL+GNKCDM +VV+TEEGQ+LA+++G++FFETSAKN++NVE F+ IA EVK R++ +GGP GG K +AK CC Sbjct: 1 MARNENPFDMQIKLLMIGDSGVGKTCLLLRYANDSFSPTFITTIGIDFKVKNIDLDGKKIKLQIWDTAGQERFRTITTSYFRGAQGILLVYDVTDRASFNSIRNWVGQIQQHADVHVNKILVGNKCDMLDDKVVSTEEGQALADEYGVKFFETSAKNNINVESGFIEIANEVKTRLMEEGGPHKKEIVNLGGTKAATTK--GNAKGCC 206 The following BLAST results are available for this feature:
BLAST of NO09G01320 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO09G01320 ID=NO09G01320|Name=NO09G01320|organism=Nannochloropsis oceanica|type=gene|length=833bpback to top protein sequence of NO09G01320.1 >NO09G01320.1-protein ID=NO09G01320.1-protein|Name=NO09G01320.1|organism=Nannochloropsis oceanica|type=polypeptide|length=204bpback to top Synonyms
Publications
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