NO09G01260, NO09G01260 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO09G01260 vs. NCBI_GenBank
Match: CBJ32810.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 127.5 bits (319), Expect = 8.400e-26 Identity = 111/320 (34.69%), Postives = 149/320 (46.56%), Query Frame = 0 Query: 48 GSPTQYLLTPSGHFCELQSFRP-SGSKYGSWFIEQKVVSDGLLYVASPMDPKLLLLPVLEKHGAAHFSPLEQILAAEADGLYMPLRTCQRLELHRMCDVNDQLGDDMILYRLNPEKVLTWLVSKVERTKRALVMLESA-------REGQNNGIGMGFAAGFTIQTMDNSSTSVGGTEDNGEKTRAAATAREATREEMRTALELVCDYLTDAWATKLQTHCGFSEEEM---KHAAGSLKRSVWEGEADAEQDTAMELTQGKRLKAVEGVGXXXXXXXXXXXXXXXXRCQKMAAMGPSIAQKKLAKTNLKGVKSISSFFDKR 357 G T++++ + ELQ RP + S+FI+Q V DG ++ AS +DP LLLPVL KH A + PL Q A A+G LR + L+ ++CDVND++G D +L R+N E VL WL +KVER R L + GFA F ++ D A +E E + ALE VC+YL D WATKL G + + A +++VW E AE D +EL+ G G G XX A S AQ+ LAK N KG+KSISSFF K+ Sbjct: 7 GEATKFMMV-GDNLLELQVARPREPQELASFFIDQAVQQDGAVHAASRVDPLFLLLPVLAKH-ATRWCPLAQ---AMAEGGCGSLRGLRHLDADKLCDVNDRMGPDDLLIRINEESVLAWLTAKVERATRRFTELATGXXXXXXXXXXXXXXXXXGFARDF---------QAIAAPMD-------ARMQKEVEAECKQRALEAVCEYLGDEWATKLAERFGTERGVLFGGRSTATKKRKTVW--EETAETDRNLELSHG------SGGG--------QKAKTEXXXXXTKAKQPLSHAQRSLAKVNKKGMKSISSFFGKK 289
BLAST of NO09G01260 vs. NCBI_GenBank
Match: PIA27560.1 (hypothetical protein AQUCO_07600017v1 [Aquilegia coerulea]) HSP 1 Score: 95.1 bits (235), Expect = 4.600e-16 Identity = 66/187 (35.29%), Postives = 95/187 (50.80%), Query Frame = 0 Query: 9 TRLLCVPEAVVASKFISTALASSSSMHLGQVLALAHPRGGSPTQYLLTPSGHFCELQSFRPSGSKYGSWFIEQKVVSDGLLYVASPMDPKLLLLPVLE-----KHG-AAHFSPLEQILAAEADGLYMPLRTCQRLELHRMCDVNDQLGDDMILYRLNPEKVLTWLVSKVERTKRALVMLESAREGQN 190 TRLL P A T + + + + G++L+L HP+ G+PT Y L +G EL F+ S YGSWF+ + V DG LY ASP+DP +LLPV E K G F L++I+ Y L + + +C++ ++G +RLN KVL WL KV + K AL L+ Q+ Sbjct: 10 TRLLIAPVA-------ETTITTRNEIGEGRLLSLRHPKSGNPTCYFLN-NGSLQELNWFKQS---YGSWFLGEYVCEDGGLYTASPVDPVFILLPVFEEARMKKEGEQGKFRQLDEIMFTNGYPGYQKLLSIAEESMQVVCEIK-EIGSSK-FFRLNDSKVLAWLCHKVHQLKMALPTLDKNYAAQD 183
BLAST of NO09G01260 vs. NCBI_GenBank
Match: PIA27559.1 (hypothetical protein AQUCO_07600017v1 [Aquilegia coerulea]) HSP 1 Score: 95.1 bits (235), Expect = 4.600e-16 Identity = 66/187 (35.29%), Postives = 95/187 (50.80%), Query Frame = 0 Query: 9 TRLLCVPEAVVASKFISTALASSSSMHLGQVLALAHPRGGSPTQYLLTPSGHFCELQSFRPSGSKYGSWFIEQKVVSDGLLYVASPMDPKLLLLPVLE-----KHG-AAHFSPLEQILAAEADGLYMPLRTCQRLELHRMCDVNDQLGDDMILYRLNPEKVLTWLVSKVERTKRALVMLESAREGQN 190 TRLL P A T + + + + G++L+L HP+ G+PT Y L +G EL F+ S YGSWF+ + V DG LY ASP+DP +LLPV E K G F L++I+ Y L + + +C++ ++G +RLN KVL WL KV + K AL L+ Q+ Sbjct: 10 TRLLIAPVA-------ETTITTRNEIGEGRLLSLRHPKSGNPTCYFLN-NGSLQELNWFKQS---YGSWFLGEYVCEDGGLYTASPVDPVFILLPVFEEARMKKEGEQGKFRQLDEIMFTNGYPGYQKLLSIAEESMQVVCEIK-EIGSSK-FFRLNDSKVLAWLCHKVHQLKMALPTLDKNYAAQD 183
BLAST of NO09G01260 vs. NCBI_GenBank
Match: XP_022798210.1 (ribonuclease H2 subunit B-like [Stylophora pistillata] >PFX33624.1 Ribonuclease H2 subunit B [Stylophora pistillata]) HSP 1 Score: 94.4 bits (233), Expect = 7.900e-16 Identity = 90/317 (28.39%), Postives = 137/317 (43.22%), Query Frame = 0 Query: 40 LALAHPRGGSPTQYLLTPSGH-FCELQSFRPSGSKYGSWFIEQKVVSDGLLYVASPMDPKLLLLPVLEKHGAAHFSPLEQILAAEADGLYMPLRTC-QRLELHRMCDVNDQLGDDMILYRLNPEKVLTWLVSKVERTKRALVMLESAREGQNNGIGMGFAAGFTIQTMDNSSTSVGGTEDNGEKTRAAATAREATREE-MRTALELVCDYLTDAWATKLQTHCGFSEEEMKHAAGSLKRSVWEGEADAEQDTAMELTQGKRLKAVEGVGXXXXXXXXXXXXXXXXRCQKMAAMGPSIAQKKLAKTNLKGVKSISSFF 354 + + HPR G+ Q+LLT SG E+ F + SWFIE V DG L+V +P+DP L+LP L K+ + F L+Q+L + L C E+ +CDV DD+ ++RLN +K WL +KVE+T +L + +G + S+T V + +ATR + +R A LV +YL+ W+ +L+ G ++E Q ++ E KR K + + A + AQK L+K + KG+KSISSFF Sbjct: 40 IKIPHPRTGNNQQFLLTHSGEKIFEVLKFT---EEPRSWFIEDSVQKDGSLFVITPVDPLFLVLPYLTKY-SQKFRTLDQLLLDDEHPPICRLTGCLSSDEILNICDVKGD--DDLQVFRLNNDKTTAWLKAKVEQTANSLSL-----------------SGVHVSKGSQSATFV-----------RSRRHIDATRSDFVRYAFGLVSEYLSLRWSERLKESLGITDE--------------------AQLSSPEEPPTKRAKVTDEIPEATEDYSKEFSKLNSKTESDKTATKLTAAQKSLSKVDKKGMKSISSFF 302
BLAST of NO09G01260 vs. NCBI_GenBank
Match: XP_012855440.1 (PREDICTED: ribonuclease H2 subunit B isoform X1 [Erythranthe guttata]) HSP 1 Score: 92.4 bits (228), Expect = 3.000e-15 Identity = 56/155 (36.13%), Postives = 83/155 (53.55%), Query Frame = 0 Query: 35 HLGQVLALAHPRGGSPTQYLLTPSGHFCELQSFRPSGSKYGSWFIEQKVVSDGLLYVASPMDPKLLLLPVLEK------HGAAHFSPLEQILAAEADGLYMPLRTCQRLELHRMCDVNDQLGDDMILYRLNPEKVLTWLVSKVERTKRALVMLES 184 H GQ L+L HP+ G+ T YL + +G ELQ F+ +GSWF+ V DG LY A+P+DP +LLPV ++ + F L++I+ + Y L + +CD+ ++G +RLN EKVL WL KV + KR L L++ Sbjct: 25 HAGQFLSLQHPKTGNTTSYLYS-NGVLLELQWFKQC---FGSWFLGDYVCEDGRLYTATPIDPVFILLPVFDEARMKKGNEPGKFRQLDEIIYVDGYPGYQTLSQISDKTMEVVCDIT-EIGSTK-FFRLNDEKVLKWLCYKVNQLKRILPTLDN 173
BLAST of NO09G01260 vs. NCBI_GenBank
Match: XP_012855441.1 (PREDICTED: ribonuclease H2 subunit B isoform X2 [Erythranthe guttata]) HSP 1 Score: 92.4 bits (228), Expect = 3.000e-15 Identity = 56/155 (36.13%), Postives = 83/155 (53.55%), Query Frame = 0 Query: 35 HLGQVLALAHPRGGSPTQYLLTPSGHFCELQSFRPSGSKYGSWFIEQKVVSDGLLYVASPMDPKLLLLPVLEK------HGAAHFSPLEQILAAEADGLYMPLRTCQRLELHRMCDVNDQLGDDMILYRLNPEKVLTWLVSKVERTKRALVMLES 184 H GQ L+L HP+ G+ T YL + +G ELQ F+ +GSWF+ V DG LY A+P+DP +LLPV ++ + F L++I+ + Y L + +CD+ ++G +RLN EKVL WL KV + KR L L++ Sbjct: 25 HAGQFLSLQHPKTGNTTSYLYS-NGVLLELQWFKQC---FGSWFLGDYVCEDGRLYTATPIDPVFILLPVFDEARMKKGNEPGKFRQLDEIIYVDGYPGYQTLSQISDKTMEVVCDIT-EIGSTK-FFRLNDEKVLKWLCYKVNQLKRILPTLDN 173
BLAST of NO09G01260 vs. NCBI_GenBank
Match: XP_020554644.1 (ribonuclease H2 subunit B [Sesamum indicum]) HSP 1 Score: 90.1 bits (222), Expect = 1.500e-14 Identity = 56/166 (33.73%), Postives = 83/166 (50.00%), Query Frame = 0 Query: 30 SSSSMHLGQVLALAHPRGGSPTQYLLTPSGHFCELQSFRPSGSKYGSWFIEQKVVSDGLLYVASPMDPKLLLLPVLEK------HGAAHFSPLEQILAAEADGLYMPLRTCQRLELHRMCDVNDQLGDDMILYRLNPEKVLTWLVSKVERTKRALVMLESAREGQN 190 S+ HLG+ L+L HPR G+ T YL + G LQ YGSWF+ V DG LY A+P+DP +LLP+ E+ + F L++I+ Y L + + +CD+ ++G +RLN KVL WL KV + K+ L L++ Q+ Sbjct: 19 STLGKHLGKFLSLRHPRTGNTTCYLYSDGG----LQELHWLNQSYGSWFLGDYVCEDGRLYTATPVDPVFILLPIFEEARMKKGNDPGKFRQLDEIIYIHGYPGYQSLSSIAEKTMQVVCDLK-EVGSTK-FFRLNDLKVLKWLCYKVHQLKQTLPTLDNNYAAQD 178
BLAST of NO09G01260 vs. NCBI_GenBank
Match: OIT07341.1 (hypothetical protein A4A49_17626 [Nicotiana attenuata]) HSP 1 Score: 89.4 bits (220), Expect = 2.500e-14 Identity = 60/173 (34.68%), Postives = 86/173 (49.71%), Query Frame = 0 Query: 16 EAVVASKFISTALASSSSMHLGQVLALAHPRGGSPTQYLLTPSGHFCELQSFRPSGSKYGSWFIEQKVVSDGLLYVASPMDPKLLLLPVLE------KHGAAHFSPLEQILAAEADGLYMPLRTCQRLELHRMCDVNDQLGDDMILYRLNPEKVLTWLVSKVERTKRALVMLE 183 E + ++ + S +GQ+L+L HP+ G+ T Y+ G EL F+ S YGSWF+ V DG LY A+P+DP +LLP+ E K F L++I Y L + + +CDV D +G YRLN EKVL WL KV + K+ L+ L+ Sbjct: 148 EGINEARVLIAPEPSKDGNKVGQLLSLQHPKSGNATCYICV-DGSLQELHWFKQS---YGSWFLGDYVCEDGRLYTATPVDPVFVLLPIFEEARMKKKDDLGKFRQLDEITYVVGYPGYQNLSSVAENCMQVVCDVKD-IGKTK-FYRLNDEKVLKWLCFKVIQLKKTLLTLD 314
BLAST of NO09G01260 vs. NCBI_GenBank
Match: XP_019265951.1 (PREDICTED: ribonuclease H2 subunit B [Nicotiana attenuata]) HSP 1 Score: 89.4 bits (220), Expect = 2.500e-14 Identity = 60/173 (34.68%), Postives = 86/173 (49.71%), Query Frame = 0 Query: 16 EAVVASKFISTALASSSSMHLGQVLALAHPRGGSPTQYLLTPSGHFCELQSFRPSGSKYGSWFIEQKVVSDGLLYVASPMDPKLLLLPVLE------KHGAAHFSPLEQILAAEADGLYMPLRTCQRLELHRMCDVNDQLGDDMILYRLNPEKVLTWLVSKVERTKRALVMLE 183 E + ++ + S +GQ+L+L HP+ G+ T Y+ G EL F+ S YGSWF+ V DG LY A+P+DP +LLP+ E K F L++I Y L + + +CDV D +G YRLN EKVL WL KV + K+ L+ L+ Sbjct: 67 EGINEARVLIAPEPSKDGNKVGQLLSLQHPKSGNATCYICV-DGSLQELHWFKQS---YGSWFLGDYVCEDGRLYTATPVDPVFVLLPIFEEARMKKKDDLGKFRQLDEITYVVGYPGYQNLSSVAENCMQVVCDVKD-IGKTK-FYRLNDEKVLKWLCFKVIQLKKTLLTLD 233
BLAST of NO09G01260 vs. NCBI_GenBank
Match: GAT42652.1 (predicted protein [Mycena chlorophos]) HSP 1 Score: 89.0 bits (219), Expect = 3.300e-14 Identity = 60/167 (35.93%), Postives = 87/167 (52.10%), Query Frame = 0 Query: 28 LASSSSMHLGQVLALAHPRGGSPTQYLLTPSGHFCELQSFRPSGSKYGSWFIEQKVVSDGLLYVASPMDPKLLLLPVLE----KHGAAHFSPLEQILAAEA-----------------DGLYMPLRTCQRLELHRMCDVNDQLGDDMILYRLNPEKVLTWLVSKVER 174 L ++ ++ + L L HPR PT +L T E+QS P+ S+ SWFIEQ+VVSDG L V +P+DP LLLP+L+ ++ F P ++I A D LY C R L +CDV ++ +D+I+YR + EKV+ +L KV R Sbjct: 7 LPDATPLNSTRFLRLLHPRTELPTLFLATDD--ILEVQSVSPANSR--SWFIEQEVVSDGKLLVFTPVDPAFLLLPILQSVYPENATGMFRPADEIFEDAATNLDKPSSDASKSITKEDVLYFTSMQCCRRALRCICDVK-EITEDIIVYRFSREKVVQYLQKKVVR 168 The following BLAST results are available for this feature:
BLAST of NO09G01260 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO09G01260 ID=NO09G01260|Name=NO09G01260|organism=Nannochloropsis oceanica|type=gene|length=1270bpback to top protein sequence of NO09G01260.1 >NO09G01260.1-protein ID=NO09G01260.1-protein|Name=NO09G01260.1|organism=Nannochloropsis oceanica|type=polypeptide|length=358bpback to top Synonyms
Publications
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