NO09G01250, NO09G01250 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO09G01250 vs. NCBI_GenBank
Match: XP_005773331.1 (hypothetical protein EMIHUDRAFT_207904 [Emiliania huxleyi CCMP1516] >EOD20902.1 hypothetical protein EMIHUDRAFT_207904 [Emiliania huxleyi CCMP1516]) HSP 1 Score: 73.9 bits (180), Expect = 3.200e-10 Identity = 38/87 (43.68%), Postives = 52/87 (59.77%), Query Frame = 0 Query: 2 PPPPGQSLFQVVNGLRHYGVGARLTRSIW----HGEPGTYWDVKRVAL-KEGDP---NHGKAWGVFHWKGVPKGGEQKIRGPLKKQW 81 P P Q+LF+V L YGVG+++ RS W + +W + RV L +GD GKAWGV WKGV + GE+++R PLKK+W Sbjct: 58 PAPTRQNLFEVARELPKYGVGSKVFRSGWTRNGYDPNEHHWQITRVELWTKGDEEQFQRGKAWGVLTWKGVTEAGERRVRTPLKKEW 144
BLAST of NO09G01250 vs. NCBI_GenBank
Match: XP_005777777.1 (hypothetical protein EMIHUDRAFT_237766 [Emiliania huxleyi CCMP1516] >EOD25348.1 hypothetical protein EMIHUDRAFT_237766 [Emiliania huxleyi CCMP1516]) HSP 1 Score: 73.9 bits (180), Expect = 3.200e-10 Identity = 38/87 (43.68%), Postives = 52/87 (59.77%), Query Frame = 0 Query: 2 PPPPGQSLFQVVNGLRHYGVGARLTRSIW----HGEPGTYWDVKRVAL-KEGDP---NHGKAWGVFHWKGVPKGGEQKIRGPLKKQW 81 P P Q+LF+V L YGVG+++ RS W + +W + RV L +GD GKAWGV WKGV + GE+++R PLKK+W Sbjct: 58 PAPTRQNLFEVARELPKYGVGSKVFRSGWTRNGYDPNEHHWQITRVELWTKGDEEQFQRGKAWGVLTWKGVTEAGERRVRTPLKKEW 144
BLAST of NO09G01250 vs. NCBI_GenBank
Match: XP_002116509.1 (hypothetical protein TRIADDRAFT_60507 [Trichoplax adhaerens] >EDV20865.1 hypothetical protein TRIADDRAFT_60507 [Trichoplax adhaerens]) HSP 1 Score: 71.6 bits (174), Expect = 1.600e-9 Identity = 33/80 (41.25%), Postives = 53/80 (66.25%), Query Frame = 0 Query: 8 SLFQVVNGLRHYGVGARLTRSIW--HGEPGTYWDVKRVALKEGDPNHGKAWGVFHWKGVPKGGEQKIRGPLKKQWTIVEG 86 +L V+N L++YG+G ++TR+IW + EP +YW + RV+ K D H AWG+F ++G + +KIR K+QW ++EG Sbjct: 21 NLPNVLNRLKYYGIGKKVTRAIWLKYDEP-SYWTITRVSFKR-DMYHANAWGIFTFRGKTEEQARKIRSCRKRQWLVLEG 98
BLAST of NO09G01250 vs. NCBI_GenBank
Match: KLO15747.1 (hypothetical protein SCHPADRAFT_849098 [Schizopora paradoxa]) HSP 1 Score: 68.2 bits (165), Expect = 1.700e-8 Identity = 31/78 (39.74%), Postives = 52/78 (66.67%), Query Frame = 0 Query: 7 QSLFQVVNGLRHYGVGARLTRSIWHGEP--GTYWDVKRVALKEGDPNHGKAWGVFHWKGVPKGGEQKIRGPLKKQWTI 83 ++L++ ++ L GVG+R+ ++ W + G+Y++V RV+LK+ + HGKAWG WKG P E++IRG LK +W + Sbjct: 30 RNLYETLSRLPKDGVGSRVYQTRWQSKKIGGSYYEVTRVSLKD-EGKHGKAWGRLVWKGRPVNEEERIRGALKYRWDV 106
BLAST of NO09G01250 vs. NCBI_GenBank
Match: XP_008616120.1 (hypothetical protein SDRG_11844 [Saprolegnia diclina VS20] >XP_008616121.1 hypothetical protein, variant [Saprolegnia diclina VS20] >EQC30527.1 hypothetical protein SDRG_11844 [Saprolegnia diclina VS20] >EQC30528.1 hypothetical protein, variant [Saprolegnia diclina VS20]) HSP 1 Score: 66.6 bits (161), Expect = 5.100e-8 Identity = 31/80 (38.75%), Postives = 51/80 (63.75%), Query Frame = 0 Query: 8 SLFQVVNGLRHYGVGARLTRSIWH----GEPGTYWDVKRVALKEGDPNHGKAWGVFHWKGVPKGGEQKIRGPLKKQWTIV 84 +LFQ + R++GVG ++TR IW E +Y ++ RVA + D HGKA+G+ ++GV +G E+++ G LK+ W +V Sbjct: 3 NLFQAICSKRNFGVGQKVTRGIWKRFETAEASSYVEITRVAPSQ-DLKHGKAYGIKVFRGVSEGKERRVDGVLKRDWAVV 81
BLAST of NO09G01250 vs. NCBI_GenBank
Match: OWZ20113.1 (putative mitochondrial protein [Phytophthora megakarya]) HSP 1 Score: 66.6 bits (161), Expect = 5.100e-8 Identity = 33/80 (41.25%), Postives = 48/80 (60.00%), Query Frame = 0 Query: 7 QSLFQVVNGLRHYGVGARLTRSIW--HGEPGTYWDVKRVALKEGDPNHGKAWGVFHWKGVPKGGEQKIRGPLKKQWTIVE 85 ++ FQV+ R YGVG R+TR IW H EP +YW+V R+ D HGK +G F ++G +++ G LKK W++ E Sbjct: 9 KNAFQVLTPTREYGVGKRVTRGIWAKHAEP-SYWEVVRIR-PSPDLKHGKVFGRFTFRGKTDPNVKRMNGVLKKDWSLYE 86
BLAST of NO09G01250 vs. NCBI_GenBank
Match: XP_012207071.1 (hypothetical protein SPRG_12319 [Saprolegnia parasitica CBS 223.65] >KDO22234.1 hypothetical protein SPRG_12319 [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 66.2 bits (160), Expect = 6.600e-8 Identity = 30/80 (37.50%), Postives = 51/80 (63.75%), Query Frame = 0 Query: 8 SLFQVVNGLRHYGVGARLTRSIWH----GEPGTYWDVKRVALKEGDPNHGKAWGVFHWKGVPKGGEQKIRGPLKKQWTIV 84 +LFQ + R++GVG ++TR IW E +Y ++ R+A + D HGKA+G+ ++GV +G E+++ G LK+ W +V Sbjct: 3 NLFQAICSKRNFGVGQKVTRGIWKRFETAEASSYVEITRIAPSQ-DLKHGKAYGIKVFRGVSEGKERRVDGVLKRDWAVV 81
BLAST of NO09G01250 vs. NCBI_GenBank
Match: XP_009533262.1 (hypothetical protein PHYSODRAFT_287078 [Phytophthora sojae] >XP_009533265.1 hypothetical protein PHYSODRAFT_352324 [Phytophthora sojae] >EGZ10517.1 hypothetical protein PHYSODRAFT_287078 [Phytophthora sojae] >EGZ10520.1 hypothetical protein PHYSODRAFT_352324 [Phytophthora sojae]) HSP 1 Score: 65.9 bits (159), Expect = 8.600e-8 Identity = 34/80 (42.50%), Postives = 48/80 (60.00%), Query Frame = 0 Query: 7 QSLFQVVNGLRHYGVGARLTRSIW--HGEPGTYWDVKRVALKEGDPNHGKAWGVFHWKGVPKGGEQKIRGPLKKQWTIVE 85 ++ FQV+ R YGVGAR+TR IW + EP +YW+V R+ D HGK +G F ++G ++I G LKK W+ E Sbjct: 9 KNAFQVLTPTREYGVGARVTRGIWAKYAEP-SYWEVVRIR-PSPDLKHGKVFGRFTFRGKTDPKVKRINGVLKKDWSFFE 86
BLAST of NO09G01250 vs. NCBI_GenBank
Match: KDQ07737.1 (hypothetical protein BOTBODRAFT_166639 [Botryobasidium botryosum FD-172 SS1]) HSP 1 Score: 65.5 bits (158), Expect = 1.100e-7 Identity = 35/82 (42.68%), Postives = 49/82 (59.76%), Query Frame = 0 Query: 8 SLFQVVNGLRHYGVGARLTRSIW--HGEPGTYWDVKRVALKEGDPNHGKAWGVFHWKGVP-KGGEQKIRGPLKKQWTIVEGT 87 +L+QV+ L GVGAR+T+ W G G++W+V RV LK+ + HGK WG W+G P ++ IRG LK QW V + Sbjct: 20 TLYQVLAKLPENGVGARVTQRRWAAKGIEGSFWEVTRVRLKD-EGKHGKVWGKLVWRGRPISERDELIRGGLKYQWEDVSSS 100
BLAST of NO09G01250 vs. NCBI_GenBank
Match: POM68371.1 (hypothetical protein PHPALM_15474 [Phytophthora palmivora var. palmivora] >POM72867.1 Hypothetical protein PHPALM_10358 [Phytophthora palmivora var. palmivora]) HSP 1 Score: 65.5 bits (158), Expect = 1.100e-7 Identity = 33/80 (41.25%), Postives = 48/80 (60.00%), Query Frame = 0 Query: 7 QSLFQVVNGLRHYGVGARLTRSIW--HGEPGTYWDVKRVALKEGDPNHGKAWGVFHWKGVPKGGEQKIRGPLKKQWTIVE 85 ++ FQV+ R YGVG R+TR IW + EP +YW+V R+ D HGK +G F ++G ++I G LKK W++ E Sbjct: 9 KNAFQVLTPTREYGVGKRVTRGIWDKYAEP-SYWEVVRIR-PSPDLKHGKVFGRFTFRGKTDPNVKRINGVLKKDWSLYE 86 The following BLAST results are available for this feature:
BLAST of NO09G01250 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO09G01250 ID=NO09G01250|Name=NO09G01250|organism=Nannochloropsis oceanica|type=gene|length=309bpback to top protein sequence of NO09G01250.1 >NO09G01250.1-protein ID=NO09G01250.1-protein|Name=NO09G01250.1|organism=Nannochloropsis oceanica|type=polypeptide|length=103bpback to top Synonyms
Publications
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