NO09G01240, NO09G01240 (gene) Nannochloropsis oceanica

Overview
NameNO09G01240
Unique NameNO09G01240
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2682
Alignment locationchr9:403235..405916 -

Link to JBrowse

Properties
Property NameValue
DescriptionGlycoside hydrolase family 37
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr9genomechr9:403235..405916 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
GO:0016787hydrolase activity
Vocabulary: INTERPRO
TermDefinition
IPR0089286-hairpin_glycosidase-like
Homology
BLAST of NO09G01240 vs. NCBI_GenBank
Match: XP_005853768.1 (glycoside hydrolase family 37, partial [Nannochloropsis gaditana CCMP526] >EKU22589.1 glycoside hydrolase family 37, partial [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 390.6 bits (1002), Expect = 1.200e-104
Identity = 191/286 (66.78%), Postives = 227/286 (79.37%), Query Frame = 0
Query:   12 LFALVNPFLNHAQQACNTTLLLDEAQALLRANVDPTQGWTVPSKATAPFLDSTSSLFTAYAYAKFDPDAGMKELLASLAGQWPINGLVPRIRFPAASDGDAWLQGTFFPGPSQWQAPQGES--NLTSAGLAAPPYHAIIAMQLFNARRDDAGLAFLAEVFPAIYKYHGYLHLSRDAHNHLVYSYHPWESELPADSPIWAEVLNATQARLTAEEWVPRVPLEEPASIAGYPGEEIFTAEMYLVDLMGRGSGYDDTRIQQETPFLVIDVEFNSVLAAADVSLAAMAKI 296
            L  LV PFL  AQ ACNTTLLLD+A+ LL  N D  QGWTVPSKATAP+LDSTSSLFTAYAYAKFDPDAGMKEL+A L+GQWP  GLVPRIRFP +S+G AWL+GT++PGP+QWQ P+  S   L++AGLAAPP+HAI+AMQLFN             VFP I+KYH YLH SRDA NHLV+S+HPWESELP DSP+W+  L AT+ R+ AE W PRVPL+EPA++ GYPG+++F  E+YLV+LM R   Y+D RIQQ TPFL +DVEFN+VLAAADV+LA MAK+
Sbjct:    2 LLGLVAPFLTDAQHACNTTLLLDKAKTLLLTNFDAEQGWTVPSKATAPYLDSTSSLFTAYAYAKFDPDAGMKELIACLSGQWPSTGLVPRIRFPPSSEGSAWLEGTYYPGPAQWQTPRDGSAAALSTAGLAAPPWHAIVAMQLFN-------------VFPPIFKYHQYLHTSRDAKNHLVFSHHPWESELPGDSPVWSAALAATKERVEAEAWSPRVPLDEPAAVPGYPGDDVFGPELYLVELMAR-LEYEDARIQQSTPFLALDVEFNAVLAAADVALADMAKL 273          
BLAST of NO09G01240 vs. NCBI_GenBank
Match: EWM27660.1 (hypothetical protein Naga_100125g1, partial [Nannochloropsis gaditana])

HSP 1 Score: 344.4 bits (882), Expect = 9.800e-91
Identity = 202/386 (52.33%), Postives = 239/386 (61.92%), Query Frame = 0
Query:  455 GSFYPFSVVSNFWPLYVGGSGLPPSRVEGLFFQIITPGLNSSFDCQGDVYRLPTSACAVNDPKPKVSLLHNLIVQRGLAMNGDFGLNQWLLNETVSLVCAASMDPFAKPPATSPTFRFCRYFDPVSGLPQGKKEDMYGEESTLAAALVWTLLHADAPGGAETPPISHDLTFALVVVELVIAFATGMGCFVLSLSLFRKLSRADVENVGPVSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALRL--------------GAGSADGKTALTTKQRKKSGH------PV-GRP--RGLYESFRH-------GHGYGGTSSGTELRRVESEMGSLNERGEGGESGGGMMSSVGRVVGAGL-----------SFLKFW 800
            G+F P SVVS+FWPLYV G G P SR++ L  +IITPGL++SFDCQGDV+RLP S CAV DP P+VSLLHNL+VQRGLA+NGD G N+WLLN TV+LVCAASMDPFA+PP   P +RF RYFDPVSG   G+K+DM+G+ESTLAAALVW LLHADAP  AETPPISHD+TFALVVVEL+IAFATG+GCFV SLSLFR+LSRAD E +G VSS                                       X                  G+   +     T  +RKK  +      PV GR   RGLY++FR         +    T  GTELRRVESE   +N  GE G  GGG++S++G   G+GL           SFLKFW
Sbjct:    6 GAFLPLSVVSSFWPLYVEG-GTPRSRLDDLLVEIITPGLDASFDCQGDVFRLPVSGCAVPDPLPRVSLLHNLVVQRGLAVNGDVGFNRWLLNNTVALVCAASMDPFAQPPPKPPAYRFSRYFDPVSGTAFGEKQDMFGKESTLAAALVWILLHADAPNRAETPPISHDVTFALVVVELIIAFATGVGCFVFSLSLFRELSRADKEGIGSVSSMLNVRDDVEDDGQGPRQGRREGVVRDSQRRKALYGSKDDXXXXXXXXXXXXXXXXXVDGSEHGENDHQRTATRRKKGAYYGPSTAPVPGRAPNRGLYQTFRSFPRMQALENDDNSTIHGTELRRVESEGDGMNGGGESGR-GGGIVSALGTAAGSGLRNLGSAVKSGVSFLKFW 389          
BLAST of NO09G01240 vs. NCBI_GenBank
Match: CBN80075.1 (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 195.3 bits (495), Expect = 7.300e-46
Identity = 219/651 (33.64%), Postives = 292/651 (44.85%), Query Frame = 0
Query:   32 LLDEAQALLRANVDPTQGWTVPSKATAPFLDSTSSLFTAYAYAKFDPDAGMKELLASLAGQWPINGLVPRIRFPAASDGDAWLQGTFFPGPSQWQAPQGESNLTSA---------GLAAPPYHAIIAMQLFN-ARRDDAGLAFLAEVFPAIYKYHGYLHLSR-DAHNHLVYSYHPWESELPADSPIWAEVLNATQARLTAEEWVPRVPLEEPASIAGYPGEEIFTAEMYLVDLMGRGSGYDDTRIQQETPFLVIDVEFNSVLAAADVSLAAMAKILQLHSSDVVDDGMRNAVTGWADTASTRLEYLWAGDRYSSYLLEANAAPKMASTKIEAATASRVSFVAASTASTAVSQKGVVAGLGVGGLTAQAKGAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTLRSLAMPKKPPXXXXXXXXXXXXXXXXGSFYPFSVVSNFWPLYVGGSGLPPSRVEGLFFQIITPGLNSSFDCQGDVYRLPTSACAVNDPKPKVSLLHNLIVQRGLAMNGDFGLNQWLLNETVSLV-------------CAASMDPFAKPPATSPTFRFCRYFDPVSGLPQGKKEDMYGEESTLAAALVWTLLHADAP-GGAETPPISHDLTFALVVVELVIAFATGMGCFVLSLSLFRKLSRAD 658
            L+  A  LL  N       T+PS       +ST+S+  A A+A  D      ELL+   GQW  NGLVP +R+    + D +L G+F PGP  W     + N +SA          LAA P HA  A+++F+ + RD     +L ++FPA+++YH YLH SR D    LVY +HPWE+E+ ADS +W  +L   +A+ T E WVP       +S+AG+PG++ F A ++L D   R  G  D  +Q+E PFL+ DV+FN+ L  +D +L  +A IL+   S            GW     T L        +S+ L     +P +A  K  AA          S          +  G G       A G GXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX    +    A     P                G     S V+N          +PP   +  F    T    + FD +                  +V +LHN +  RGL      GL+ WL N T SL+                              FRF R FD  SGLP    E   G  S             DAP GG + PPI+H   F LV VEL  +FA G+ C + ++SL RKL++ D
Sbjct:   58 LVQGAAGLLLENYRDELEATIPSPLIDAHQESTTSVMVAEAWAHVDQQRARAELLSIFRGQWE-NGLVPTVRYAPGYEAD-FLGGSFLPGPGGWGGRSSDKNASSAQSAGGANTSSLAAIPLHAEAALRIFDLSPRDAEARLWLQDLFPALFRYHDYLHGSRNDPETGLVYVHHPWETEVSADSALWPSLLADARAQATKESWVPPPIPSSVSSVAGFPGKKAFQAAIFLSDCSAR-HGRVDEDVQRECPFLLQDVQFNAALMRSDKALLELAGILEATRS------------GW--QTKTFLARPATSSGFSALL-----SPGLAPFKANAAIEXXXXXXDVSFRCGDFPVMDLECGYG-----ENASGGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIVTGSGDGGAAVLFSPAAAGPGLEELGVEGDAGQLE--SRVANTRRTAAEVPAVPPPATD--FSAEATTA--ARFDAED------------GGSSSRVWVLHNFLAVRGLRRLSLNGLSVWLANSTSSLLGNPPEGEYEYRXXXXXXXXXXXXXXXXXXXFRFHRAFDGFSGLPLPGPE---GNSSXXXXXXXXXXXLGDAPDGGNDFPPITHATLFMLVAVELAFSFAMGVSCLLFNVSLLRKLAKED 660          
BLAST of NO09G01240 vs. NCBI_GenBank
Match: WP_052515403.1 (DUF547 domain-containing protein [Dethiosulfatarculus sandiegensis])

HSP 1 Score: 133.7 bits (335), Expect = 2.600e-27
Identity = 102/266 (38.35%), Postives = 131/266 (49.25%), Query Frame = 0
Query:   33 LDEAQALLRANVDPTQG-WTVPSKATAPFLDSTSSLFTAYAYAKFDPDAGMKELLASLAGQWPINGLVPRIRFPAASDGDAWLQGTFFPGPSQWQAPQGESNLTSAGLAAPPYHAIIAMQLFNARRD-DAGLAFLAEVFPAIYKYHGYLHLSRDAH-NHLVYSYHPWESELPADSPIWAEVLNATQARLTAEEWVPRVPLEEPASIAGYPGEEIFTAEMYLVDLMGRGSGYDDTRIQQETPFLVIDVEFNSVLAAADVSLAAMAKI 296
            L++A+ +L  N    QG +T PS        +  S F A  YA+FD   GM EL      QW  NG++P I F           G +FP P  WQAP+G   LTS G+ APP  A   + LF    D +   AFL E FP +   H YLH++RD     L Y  HPWES L  +SP W E L              R  L++ A     P +  +   + LVDL  R + YD+  IQ+E PFLV DV FNS+L  AD  LA +A+I
Sbjct:   14 LNKAKTILSLN---WQGSYTRPSPGIYSHQWNRDSAFIAMGYARFDVYRGMMELNHLFKHQWE-NGMLPHIVFNKDH------LGHYFPEPDFWQAPKG--RLTS-GITAPPLQATACLHLFEHAPDKEMATAFLKEAFPHLLASHKYLHITRDPEATGLAYIRHPWESGL-ENSPCWEEPLKNMGIDRAKLPSYKRTDLKQGALSEKIPSDHDYDRYVMLVDLF-RKAAYDEKEIQKECPFLVYDVLFNSILCKADQDLAEIARI 264          
BLAST of NO09G01240 vs. NCBI_GenBank
Match: KIX12230.1 (glycoside hydrolase [Dethiosulfatarculus sandiegensis])

HSP 1 Score: 132.9 bits (333), Expect = 4.500e-27
Identity = 101/266 (37.97%), Postives = 131/266 (49.25%), Query Frame = 0
Query:   33 LDEAQALLRANVDPTQG-WTVPSKATAPFLDSTSSLFTAYAYAKFDPDAGMKELLASLAGQWPINGLVPRIRFPAASDGDAWLQGTFFPGPSQWQAPQGESNLTSAGLAAPPYHAIIAMQLFNARRD-DAGLAFLAEVFPAIYKYHGYLHLSRDAH-NHLVYSYHPWESELPADSPIWAEVLNATQARLTAEEWVPRVPLEEPASIAGYPGEEIFTAEMYLVDLMGRGSGYDDTRIQQETPFLVIDVEFNSVLAAADVSLAAMAKI 296
            +++A+ +L  N    QG +T PS        +  S F A  YA+FD   GM EL      QW  NG++P I F           G +FP P  WQAP+G   LTS G+ APP  A   + LF    D +   AFL E FP +   H YLH++RD     L Y  HPWES L  +SP W E L              R  L++ A     P +  +   + LVDL  R + YD+  IQ+E PFLV DV FNS+L  AD  LA +A+I
Sbjct:    1 MNKAKTILSLN---WQGSYTRPSPGIYSHQWNRDSAFIAMGYARFDVYRGMMELNHLFKHQWE-NGMLPHIVFNKDH------LGHYFPEPDFWQAPKG--RLTS-GITAPPLQATACLHLFEHAPDKEMATAFLKEAFPHLLASHKYLHITRDPEATGLAYIRHPWESGL-ENSPCWEEPLKNMGIDRAKLPSYKRTDLKQGALSEKIPSDHDYDRYVMLVDLF-RKAAYDEKEIQKECPFLVYDVLFNSILCKADQDLAEIARI 251          
BLAST of NO09G01240 vs. NCBI_GenBank
Match: PLS79217.1 (glycoside hydrolase [Chloroflexi bacterium])

HSP 1 Score: 127.9 bits (320), Expect = 1.400e-25
Identity = 94/272 (34.56%), Postives = 134/272 (49.26%), Query Frame = 0
Query:   32 LLDEAQALLRANVDPTQGWTVPSKATAPFLDSTSSLFTAYAYAKFDPDAGMKELLASLAGQWPINGLVPRIRFPAASDGDAWLQGTFFPGPSQWQ---APQGESNLTSAGLAAPPYHAIIAMQLFNARRD-DAGLAFLAEVFPAIYKYHGYLHLSRDAHNH-LVYSYHPWESELPADSPIWAEVLNATQARLTAEEWVPRVPLEEPASI--AGYPGEEIFTAEMYLVDLMGRGSGYDDTRIQQETPFLVIDVEFNSVLAAADVSLAAMAKIL 297
            L+++A+A+L  N     G+T P+    P   S  S F A  YA  D     +EL +    QW  NGL+P I F   + G       +FPGP  W+   +P      TS G+  PP HA   + +F    D D G AFLAE+FP +  +H YL+  RD HN  LVY  H WES    +SP+W  V      R    + +P     +   +  A  P    +   +YLV L     GYD+ +I+ + PFL+ DV FN++L  ++  LA +A+IL
Sbjct:    8 LVEQAKAVLHENW--VGGFTKPAPRLYPHQWSWDSAFIAIGYAHHDQGRAEQELRSLFDAQW-TNGLLPHIVFNPQATG-------YFPGPELWRIETSPHAPQQRTS-GIVQPPVHATAVLHVFRHAHDHDQGRAFLAEMFPGLRAWHAYLYRERDPHNEGLVYIRHNWESG-QDNSPLWDSVWQRLTLR---PDQIPPYQRADTTHVDAADRPTNAEYDRYVYLVKLFA-DHGYDEAQIRADCPFLIQDVLFNTLLCQSNRDLAEIARIL 263          
BLAST of NO09G01240 vs. NCBI_GenBank
Match: WP_047865021.1 (glycoside hydrolase [Rubrobacter aplysinae])

HSP 1 Score: 127.5 bits (319), Expect = 1.900e-25
Identity = 89/254 (35.04%), Postives = 129/254 (50.79%), Query Frame = 0
Query:   50 WTVPSKATAPFLDSTSSLFTAYAYAKFDPDAGMKELLASLAGQWPINGLVPRIRFPAASDGDAWLQGTFFPGPSQWQ---APQGESNLTSAGLAAPPYHAIIAMQLFN--ARRDDAGL-AFLAEVFPAIYKYHGYLHLSRDAH-NHLVYSYHPWESELPADSPIWAEVLNATQARLTAEEWVPRVPLEEPASIA--GYPGEEIFTAEMYLVDLMGRGSGYDDTRIQQETPFLVIDVEFNSVLAAADVSLAAMAK 295
            +T PS    P   S  S F A  YA +D     +EL +  AGQW  NGL+P I F    +        +FPG   W+   +P     + ++G+  PP HAI A +++    R D AG  AF  +++PA+  +HGYLH  RD     LVY  HPWES +  +SP+W  +L   + R      VP     +   +A    P +  +   ++LV       GYD+  I+++ PFLV DV FN++L AAD  LAA+A+
Sbjct:   24 YTKPSPRLYPHQWSWDSAFIALGYATYDTSRAWRELSSLFAGQWS-NGLLPHIVFNPELN-------NYFPGSRVWRTELSPHSPGEIRTSGVVQPPVHAIAARRVYERLLREDSAGAEAFAEQIYPALAAWHGYLHRERDPDGTGLVYIRHPWESGMD-NSPLWDGILQRIRLR---PGQVPEYQRLDVGFVAEEDRPVDAEYDRYIHLV-RHAADRGYDEAAIREDAPFLVWDVLFNTILCAADRDLAALAR 264          
BLAST of NO09G01240 vs. NCBI_GenBank
Match: XP_005718280.1 (unnamed protein product [Chondrus crispus] >CDF38387.1 unnamed protein product [Chondrus crispus])

HSP 1 Score: 124.0 bits (310), Expect = 2.100e-24
Identity = 92/282 (32.62%), Postives = 138/282 (48.94%), Query Frame = 0
Query:   32 LLDEAQALLRANVDPTQGWTVPSKATAPFLDSTSSLFTAYAYAKFDPDAGMKELLASLAGQWPINGLVPRIRFPAASDGDAWLQGTFFPGPSQW---QAPQGESNLTSAGLAAPPYHAIIAMQLFNARRDDAGLAF----LAEVFPAIYKYHGYLHLSRD-AHNHLVYSYHPWESELPADSPIWAEVLNATQARLTAEEWVPRVPLEEPASIAGYPGEEIFTAEMYLVDLMGRGSGYDDTRIQQETPFLVIDVEFNSVLAAADVSLAAMAKILQLHSSDVVD 306
            LL  AQA+L AN       T+PS +  P   S  S F A  Y+ +D    + EL A    QW  NGL+P I F  A+D       ++FPGPS W   ++P       ++G+  PP HAI ++ +++  +     A     L  ++P +  +H YL+  RD     LV+  H WES +  +SP W E L A      A     RV   + A     P    +   +YL+ +    + YD+  I +++PFLV DV FNS+L+ A ++LA +A I  LH ++  D
Sbjct:   30 LLAPAQAVLSANWVSDMNSTLPSPSLYPHQWSWDSAFVAIGYSHYDTPRAIAELHALFRAQW-ANGLLPHIVFNPATD------ESYFPGPSFWNTHRSPHAPPAAATSGIVQPPVHAIASLAVYHNAKGPHMKALAHRHLTSIYPNLVAWHRYLYAERDPLQEGLVFLRHMWESGMD-NSPAWDEPLAAMHVTPDAIPTYSRVDKGKVAHAKERPTSFFYDRAVYLIKIF-YDNAYDEKAIFEKSPFLVQDVLFNSILSRAGMALAEIADI--LHKNEEAD 300          
BLAST of NO09G01240 vs. NCBI_GenBank
Match: WP_044218330.1 (hypothetical protein [Phaeodactylibacter xiamenensis] >KGE88620.1 hypothetical protein IX84_08085 [Phaeodactylibacter xiamenensis])

HSP 1 Score: 122.9 bits (307), Expect = 4.600e-24
Identity = 100/318 (31.45%), Postives = 150/318 (47.17%), Query Frame = 0
Query:   33 LDEAQALLRANVDPTQGW----TVPSKATAPFLDSTSSLFTAYAYAKFDPDAGMKELLASLAGQWPINGLVPRIRFPAASDGDAWLQGTFFPGPSQWQA---PQGESNLTSAGLAAPPYHAIIAMQLFNARRDDA-GLAFLAEVFPAIYKYHGYLHLSRDAHNH-LVYSYHPWESELPADSPIWAEVLNATQARLTAEEWVPRVPLEEPASIAGYPGEEIFTAEMYLVDLMGRGSGYDDTRIQQETPFLVIDVEFNSVLAAADVSLAAMAKILQLHSSDVVDDGMRNAVTGWADTASTRLEYLWAGDR--YSSYLLEA 340
            +++AQ    A V   Q W    T P+ +  P   +  + F A   A  +    M E+    + QW  NGLVP+I F     GD   Q  +FPGP  WQA    Q   ++ ++G+  PP H  +  +++    D A   AFL E++P +   H YL+  RD     LVY  HPWE     +SPIW   L+  Q          R  L++P +    P +E +   +YLVDL  R   YDD +I +E PFL+ D  FN +L+ ++    A+ +I  L   D+ +    + +T W+       E LW  DR  Y+++ L A
Sbjct:    1 MNQAQLQQMAQVVLDQNWNGQFTKPAPSLYPHQWNWDAGFIAIGNAYDNFGRAMAEMRHLFSAQWK-NGLVPQIVF-----GDD-PQARYFPGPGFWQAHRSAQAPEHIQTSGITMPPVHGFVLWKMYEVAADKAQAKAFLKEMYPKVLALHRYLYDYRDPEEEGLVYIRHPWEGGTD-NSPIWDRTLSRMQIDRDQLPAYERKDLQKPKAAEHRPTQEDYDRYVYLVDLF-RQHDYDDQKIYEECPFLIQDPLFNGILSWSN---EALIQIGSLIGEDITEPMQWHELTVWSMN-----EKLWDEDRGIYNAFDLRA 301          
BLAST of NO09G01240 vs. NCBI_GenBank
Match: WP_012676844.1 (DUF547 domain-containing protein [Persephonella marina] >ACO04607.1 conserved hypothetical protein [Persephonella marina EX-H1])

HSP 1 Score: 121.3 bits (303), Expect = 1.300e-23
Identity = 82/256 (32.03%), Postives = 138/256 (53.91%), Query Frame = 0
Query:   50 WTVPSKATAPFLDSTSSLFTAYAYAKFDPDAGMKELLASLAGQWPINGLVPRIRFPAASDGDAWLQGTFFPGPSQWQ---APQGESNLTSAGLAAPPYHAIIAMQLF-NARRDDAGLAFLAEVFPAIYKYHGYLHLSRDA-HNHLVYSYHPWESELPADSPIWAEVLNATQARLTAEEW-VPRVPLEEPASI--AGYPGEEIFTAEMYLVDLMGRGSGYDDTRIQQETPFLVIDVEFNSVLAAADVSLAAMAKILQ 298
            +TVPS    P   +  S F A  Y++++ +  ++E+L     QW  NG++P+I F   +       G +FP P  W+   +P    N+ ++G+  PP H    ++++ NAR  D  + FL  ++P + K H YL+L R+   N L+Y  HPWES +  +SP+W  VL     R+  ++  +P    ++   I     P +  +   +YLVD+  R + YD+ RI +E PF+VID  FNS+L A++ +L  +A I++
Sbjct:   22 YTVPSVHLYPHQWNWDSGFIAIGYSRYNMERAVREILHLFEAQWK-NGMLPQIVFNKNA------LGRYFPEPDFWRTDLSPYAPDNILTSGITMPPIHGYAVLKMYENAREKDRLIPFLKFIYPKLIKLHEYLYLERNPDDNGLIYIRHPWESGMD-NSPMWDPVLE----RIDIDKVDIPEFERKDNKIIDPEQRPKDIDYKRYIYLVDIF-RKNRYDEKRIFEECPFIVIDPLFNSILCASNEALVQIADIIK 264          
The following BLAST results are available for this feature:
BLAST of NO09G01240 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
XP_005853768.11.200e-10466.78glycoside hydrolase family 37, partial [Nannochlor... [more]
EWM27660.19.800e-9152.33hypothetical protein Naga_100125g1, partial [Nanno... [more]
CBN80075.17.300e-4633.64conserved unknown protein [Ectocarpus siliculosus][more]
WP_052515403.12.600e-2738.35DUF547 domain-containing protein [Dethiosulfatarcu... [more]
KIX12230.14.500e-2737.97glycoside hydrolase [Dethiosulfatarculus sandiegen... [more]
PLS79217.11.400e-2534.56glycoside hydrolase [Chloroflexi bacterium][more]
WP_047865021.11.900e-2535.04glycoside hydrolase [Rubrobacter aplysinae][more]
XP_005718280.12.100e-2432.62unnamed protein product [Chondrus crispus] >CDF383... [more]
WP_044218330.14.600e-2431.45hypothetical protein [Phaeodactylibacter xiamenens... [more]
WP_012676844.11.300e-2332.03DUF547 domain-containing protein [Persephonella ma... [more]

Pages

back to top
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL119nonsL119Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR021ncniR021Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR127ngnoR127Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK010609NSK010609Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO09G01240.1NO09G01240.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
Naga_100125g1gene2900Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO09G01240.1NO09G01240.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO09G01240 ID=NO09G01240|Name=NO09G01240|organism=Nannochloropsis oceanica|type=gene|length=2682bp
ATGCTTGGAAGAACATCTGCAGCGGCTAGCATTCTCTTTGCCTTGGTCAA
CCCCTTTCTGAACCACGCGCAGCAAGCCTGCAACACGACCCTTCTACTGG
ATGAGGCCCAGGCGCTGCTACGAGCGAACGTCGATCCCACGCAAGGATGG
ACGGTGCCTTCCAAAGCCACGGCTCCCTTTCTCGACTCGACCTCCTCCCT
CTTTACTGCCTATGCCTATGCCAAGTTTGACCCGGACGCCGGCATGAAAG
AACTGCTGGCGAGgtacgctttatctactactatgtgtgtggctgtatgg
ctatagagggtctgtcgcttgcgggcgctggaaacgagggagtgagggag
ggagggaggcagcagaggcggagctcggtacggagctggagggtcatttc
tagtcggtccgaatcgcaatttttgagccccgtgcacgtcttagaaatta
tccaatactactcaccttattttttggtctctgtacaattccttcttcat
ccttccctcccaactctcccctgtctctcctaccccaaaacacagCCTAG
CAGGCCAGTGGCCCATCAATGGCCTCGTCCCCCGTATACGTTTTCCCGCC
GCCAGCGACGGCGACGCTTGGCTTCAAGGAACTTTCTTCCCCGGTCCTAG
TCAATGGCAAGCCCCTCAAGGCGAGTCCAATCTAACCAGCGCAGGACTTG
CTGCCCCTCCCTATCATGCTATCATCGCAATGCAACTCTTTAATGCCCGT
CGGGACGATGCAGGCCTGGCTTTCCTCGCTGAAGTCTTTCCTGCCATTTA
TAAGTATCATGGCTATCTACATTTATCTCGAGATGCACACAATCACTTGG
TTTATTCCTATCATCCGTGGGAAAGCGAGCTCCCAGCCGACTCACCCATA
TGGGCCGAGGTGCTCAACGCTACCCAAGCACGACTGACTGCCGAGGAGTG
GGTGCCACGCGTACCCCTGGAGGAGCCAGCAAGCATCGCTGGATATCCTG
GAGAAGAGATATTTACGGCAGAAATGTATTTGGTTGATTTGATGGGGAGG
GGAAGTGGGTATGATGACACGAGGATTCAACAGGAGACGCCTTTCTTGGT
GATTGACGTGGAATTTAATTCGGTGTTAGCGGCGGCGGATGTGAGTCTGG
CGGCAATGGCGAAGATATTGCAGCTGCACAGTTCGGACGTGGTGGATGAT
GGGATGCGGAATGCGGTGACGGGGTGGGCGGACACAGCAAGCACACGGTT
AGAGTACCTGTGGGCGGGTGATCGGTATAGTAGTTATTTGCTTGAAGCGA
ACGCAGCACCCAAAATGGCCTCAACGAAAATCGAGGCAGCAACAGCATCA
AGGGTATCTTTTGTGGCGGCATCGACGGCCTCAACGGCGGTGTCGCAGAA
GGGCGTGGTAGCTGGGTTAGGAGTGGGGGGTTTGACGGCGCAGGCGAAGG
GAGCCGGTAGTAGTGGTAGGGCTGCTGGTACTGCTGCTACTGCTACTACT
ACTGGTAGTGGCAGTAAACGACCGAAGGTGACAACACCGGTGCATCATCA
TCAGGGAGGAACATTGCGCAGCTTGGCCATGCCCAAGAAACCCCCCGCAG
TGTCCGCCCCTCCTCCCTCCCCTCCCTCCGTCCCTTTGCCCCCCGGAAGC
TTCTATCCTTTCAGCGTCGTAAGTAATTTTTGGCCTTTGTATGTGGGAGG
AAGTGGTCTGCCTCCTTCTCGAGTGGAAGGCCTCTTCTTTCAAATCATTA
CGCCGGGCTTAAACTCATCTTTTGATTGTCAAGGGGATGTGTATAGACTA
CCCACCAGTGCCTGTGCCGTAAACGACCCCAAACCCAAGGTATCTCTCCT
GCACAATCTAATTGTCCAAAGAGGCCTGGCCATGAATGGGGACTTCGGTT
TGAATCAGTGGCTACTGAACGAGACGGTTTCGTTGGTCTGTGCCGCGAGC
ATGGACCCATTTGCGAAGCCTCCGGCGACGTCCCCGACGTTTCGGTTTTG
TCGGTATTTTGATCCTGTCTCTGGTTTGCCCCAGGGGAAAAAGGAGGACA
TGTATGGAGAGGAGAGCACGTTGGCTGCGGCGTTGGTTTGGACGTTGTTG
CATGCTGATGCTCCGGGAGGGGCAGAGACTCCGCCTATAAGTCATGATCT
CACGTTTGCTTTGGTGGTAGTGGAGTTGGTTATTGCGTTTGCAACGGGGA
TGGGGTGTTTTGTATTGTCGTTGAGTTTGTTCAGGAAGTTGTCGAGGGCG
GATGTGGAAAATGTGGGGCCGGTATCGTCCATGTTGCTTGTGCGGGAGGA
GGAAGAGGAGGGACACTATGAAGGGGAAGAGGGGGATGATGATGGGGAAA
GGAGCTACCAAGGAGGGGAGACGGAGGAGGAAGAGAAGAGGAGTTCCAAA
GCTCTCAGGCTTGGCGCTGGTTCGGCTGATGGTAAGACGGCGTTGACGAC
CAAACAGAGAAAAAAGAGTGGCCACCCGGTGGGCCGGCCCCGCGGGCTCT
ATGAATCATTCCGACATGGCCATGGGTATGGTGGTACGAGCAGTGGAACT
GAATTGCGACGTGTTGAAAGCGAGATGGGAAGCTTGAATGAAAGAGGGGA
AGGCGGTGAGAGTGGGGGGGGTATGATGTCAAGCGTGGGCAGGGTGGTGG
GTGCGGGCTTGTCGTTCTTGAAATTTTGGTAG
back to top

protein sequence of NO09G01240.1

>NO09G01240.1-protein ID=NO09G01240.1-protein|Name=NO09G01240.1|organism=Nannochloropsis oceanica|type=polypeptide|length=800bp
MLGRTSAAASILFALVNPFLNHAQQACNTTLLLDEAQALLRANVDPTQGW
TVPSKATAPFLDSTSSLFTAYAYAKFDPDAGMKELLASLAGQWPINGLVP
RIRFPAASDGDAWLQGTFFPGPSQWQAPQGESNLTSAGLAAPPYHAIIAM
QLFNARRDDAGLAFLAEVFPAIYKYHGYLHLSRDAHNHLVYSYHPWESEL
PADSPIWAEVLNATQARLTAEEWVPRVPLEEPASIAGYPGEEIFTAEMYL
VDLMGRGSGYDDTRIQQETPFLVIDVEFNSVLAAADVSLAAMAKILQLHS
SDVVDDGMRNAVTGWADTASTRLEYLWAGDRYSSYLLEANAAPKMASTKI
EAATASRVSFVAASTASTAVSQKGVVAGLGVGGLTAQAKGAGSSGRAAGT
AATATTTGSGSKRPKVTTPVHHHQGGTLRSLAMPKKPPAVSAPPPSPPSV
PLPPGSFYPFSVVSNFWPLYVGGSGLPPSRVEGLFFQIITPGLNSSFDCQ
GDVYRLPTSACAVNDPKPKVSLLHNLIVQRGLAMNGDFGLNQWLLNETVS
LVCAASMDPFAKPPATSPTFRFCRYFDPVSGLPQGKKEDMYGEESTLAAA
LVWTLLHADAPGGAETPPISHDLTFALVVVELVIAFATGMGCFVLSLSLF
RKLSRADVENVGPVSSMLLVREEEEEGHYEGEEGDDDGERSYQGGETEEE
EKRSSKALRLGAGSADGKTALTTKQRKKSGHPVGRPRGLYESFRHGHGYG
GTSSGTELRRVESEMGSLNERGEGGESGGGMMSSVGRVVGAGLSFLKFW*
back to top
Synonyms
Publications