NO09G01210, NO09G01210 (gene) Nannochloropsis oceanica

Overview
NameNO09G01210
Unique NameNO09G01210
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1749
Alignment locationchr9:396018..397766 -

Link to JBrowse

Properties
Property NameValue
DescriptionGlutamyl-tRNA reductase
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr9genomechr9:396018..397766 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
PXD0160542021-01-14
PXD0166992021-01-08
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
PXD0100302020-03-16
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0008883glutamyl-tRNA reductase activity
GO:0050661NADP binding
GO:0003824catalytic activity
GO:0000166nucleotide binding
Vocabulary: Biological Process
TermDefinition
GO:0033014tetrapyrrole biosynthetic process
GO:0055114oxidation-reduction process
GO:0009987cellular process
GO:0009058biosynthetic process
Vocabulary: INTERPRO
TermDefinition
IPR036343GluRdtase_N_sf
IPR036453GluRdtase_dimer_dom_sf
IPR036291NAD(P)-bd_dom_sf
IPR006151Shikm_DH/Glu-tRNA_Rdtase
IPR0158954pyrrol_synth_GluRdtase_N
IPR0158964pyrrol_synth_GluRdtase_dimer
Homology
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BLAST of NO09G01210 vs. NCBI_GenBank
Match: EWM27669.1 (glutamyl-trna reductase [Nannochloropsis gaditana])

HSP 1 Score: 882.5 bits (2279), Expect = 7.300e-253
Identity = 493/588 (83.84%), Postives = 523/588 (88.95%), Query Frame = 0 
Query:    1 MCPLRIFFALLQLHLXXXXXXXXXXXXXXXXXXXGGRNCPFRGWG-GSKATNTVTTA-AFLAPATLPRNIAAPRAPPSG-AGTAVLDEGGFRTSSGLFVAPSTGSKVESSMRKRRVGAALKPLYAATVAPP---ISTGXXXXXXXXXXXXXXXXXXXATSMTPLEVHVIGLSHHNAAVDVREKLSIPEAQWNDAANKLCESNVIAEACTLSTCNRFEIYFAAHDSYAAFHEATAFLERHSGLPQKVLRKNLFLLSGEDAIWHLMRVSGGLDSLVVGEGQILSQVKQCYNHGMEEDGKGGKVVSRMLNSAVAAGKRVRSETGISKGAVSISSAAVEFSQLRCPQDLGKTFEESKVAIIGAGKMSRLLMIHMASQGMKSVTLMNRGRERAETLAAEFPEMEVDIRLMDELWPVMHSHDVVYTSTSAQGCLLTKDNIQDAGLAPGKVIVDISVPRNVETEVADIEGMYSYNVDHLKEVVDRNTATRKKQMLEAEDLLVEEMEKFRSWQFSLGAVPALMKLQEKAETMRMEELKKASKKLNNLSDKELQTVERLTKGIVNKLLHGPMSHLRATEDLEKNLVALKTLKAVFEL 583
            MCPLR+FFALLQLH+                    GRNCPFRGW  G  + NT T++ AF+AP+   R+ AA  +  S  AG +   EGGFRTS GLFVAP+TG    S  R+RRVG ALKPLYAATVA P   I    XXXXXXXXXXXXXXXXXX  SMTPLEVHVIGLSHHNAAV+VREKLSIPEAQWN+AANKLCES VIAEACTLSTCNRFEIYFAAHDSYAAFHEATAFLERHSGLPQ VLRKNLFLLSGEDAIWHLMRVSGGLDSLVVGEGQILSQVKQCYNHGMEEDGKGGKV+SRMLNSAVAAGKRVRSETGISKGAVSISSAAVEFSQLRCP+DLGK FE+S+VAI+GAGKMSRLLMIHMASQG+K+VTLMNRGRERAETLAAEFPEMEV +RLMD+LWPVMH+HDVVYTSTSAQGCLLTKDNIQ +GLAPGKVIVDISVPRNVETEV++IEGM++YNVDHLKEVVDRNTA RKKQMLEAEDLLVEEMEKFRSWQFSLGAVPALMKLQEKAETMRMEELKKASKKLNNLS+KELQTVERLTKGIVNKLLHGPMSHLRATEDLEKNLVALKTLKAVFEL
Sbjct:   61 MCPLRVFFALLQLHILCVFGLGGYASSAGDARAT-GRNCPFRGWAVGKTSANTATSSCAFVAPSPPSRSAAALSSTTSEVAGPS--SEGGFRTSMGLFVAPTTGHTAHSLSRRRRVGPALKPLYAATVAAPTASIPADAXXXXXXXXXXXXXXXXXXXXSMTPLEVHVIGLSHHNAAVEVREKLSIPEAQWNEAANKLCESGVIAEACTLSTCNRFEIYFAAHDSYAAFHEATAFLERHSGLPQSVLRKNLFLLSGEDAIWHLMRVSGGLDSLVVGEGQILSQVKQCYNHGMEEDGKGGKVISRMLNSAVAAGKRVRSETGISKGAVSISSAAVEFSQLRCPKDLGKPFEDSRVAIVGAGKMSRLLMIHMASQGVKAVTLMNRGRERAETLAAEFPEMEVAVRLMDDLWPVMHTHDVVYTSTSAQGCLLTKDNIQASGLAPGKVIVDISVPRNVETEVSEIEGMFAYNVDHLKEVVDRNTAMRKKQMLEAEDLLVEEMEKFRSWQFSLGAVPALMKLQEKAETMRMEELKKASKKLNNLSEKELQTVERLTKGIVNKLLHGPMSHLRATEDLEKNLVALKTLKAVFEL 645
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BLAST of NO09G01210 vs. NCBI_GenBank
Match: CBN76275.1 (Glutamyl-tRNA Reductase, chloroplast precursor [Ectocarpus siliculosus])

HSP 1 Score: 486.9 bits (1252), Expect = 8.900e-134
Identity = 256/437 (58.58%), Postives = 326/437 (74.60%), Query Frame = 0 
Query:  152 ATSMTPLEVHVIGLSHHNAAVDVREKLSIPEAQWNDAANKLCESNVIAEACTLSTCNRFEIYFAAHDSYAAFHEATAFLERHSGLPQKVLRKNLFLLSGEDAIWHLMRVSGGLDSLVVGEGQILSQVKQCYNHGMEEDGKGGKVVSRMLNSAVAAGKRVRSETGISKGAVSISSAAVEFSQLRCPQDLGKTFEESKVAIIGAGKMSRLLMIHMASQGMKSVTLMNRGRERAETLAAEFPEMEVDIRL----MDELWPVMHSHDVVYTSTSAQGCLLTKDNIQ--DAGLAPGKVIVDISVPRNVETEVADIEGMYSYNVDHLKEVVDRNTATRKKQMLEAEDLLVEEMEKFRSWQFSLGAVPALMKLQEKAETMRMEELKKASKKLNNLSDKELQTVERLTKGIVNKLLHGPMSHLRATEDLEKNLVALKTLKAVFEL 583
            A S TPL VHVIGLSHHNA VDVRE+L++PEA+WN A+ KLC    I EA  LSTCNRFE+Y AA D++AA  +    L+ +SGL Q  LR+NLF+LS EDA+WHL+RVS GLDSLVVGEGQILSQV+QCY HG E+DG  GKVV+RMLN+AV+AGKR R+ET ISKGAVSISSAA EFS++R  +DLGK    S VAIIGAGKM+RLL++H+ S G+K V L+NR   +   L  EFP++E+D+RL      EL   +   D+++TSTSA GC++ K+ ++  +AG     + VDISVPRNVE + +D+ G+++Y+VD LK VV RNTA R+++MLEAED+L EE  KF  WQ SL A PA+ K+QEK E MR +E++KA  KL NLSDKELQ VE+L++GIVNK+LHGPMS LR     ++    LK LK +F+L
Sbjct:  146 AASSTPLSVHVIGLSHHNAGVDVRERLAVPEAEWNLASAKLCGYENIREAAVLSTCNRFEVYVAATDAHAAIRDVMTHLQEYSGLSQSELRQNLFMLSREDAVWHLLRVSAGLDSLVVGEGQILSQVRQCYLHGTEKDGSAGKVVARMLNTAVSAGKRARAETSISKGAVSISSAAAEFSKMRAEKDLGKKLVGSSVAIIGAGKMTRLLLVHLGSLGIKKVILVNRSMPKCTELMEEFPDIEMDVRLGAEDPTELERAIGEADIIFTSTSATGCIVGKEQLERLEAGKERPVMFVDISVPRNVEADCSDVPGVFAYDVDDLKMVVARNTALRRREMLEAEDILSEEHNKFSGWQQSLSATPAISKMQEKFEGMRAQEMRKAGNKLPNLSDKELQVVEKLSQGIVNKMLHGPMSALRQPGGPDEKKQTLKILKDMFKL 582
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BLAST of NO09G01210 vs. NCBI_GenBank
Match: GAX14965.1 (glutamyl-tRNA reductase [Fistulifera solaris])

HSP 1 Score: 472.2 bits (1214), Expect = 2.300e-129
Identity = 238/429 (55.48%), Postives = 327/429 (76.22%), Query Frame = 0 
Query:  158 LEVHVIGLSHHNAAVDVREKLSIPEAQWNDAANKLCESNVIAEACTLSTCNRFEIYFAAHDSYAAFHEATAFLERHSGLPQKVLRKNLFLLSGEDAIWHLMRVSGGLDSLVVGEGQILSQVKQCYNHGMEEDGKGGKVVSRMLNSAVAAGKRVRSETGISKGAVSISSAAVEFSQLRCPQDLGKTFEESKVAIIGAGKMSRLLMIHMASQGMKSVTLMNRGRERAETLAAEFPEMEVDIRLMDELWPVMHSHDVVYTSTSAQGCLLTKDNIQDAGLAPGK--VIVDISVPRNVETEVADIEGMYSYNVDHLKEVVDRNTATRKKQMLEAEDLLVEEMEKFRSWQFSLGAVPALMKLQEKAETMRMEELKKASKKLN--NLSDKELQTVERLTKGIVNKLLHGPMSHLRATEDLEKNLVALKTLKAVFEL 583
            L+VHV+GLS H+A V+VREKL+IPEA+WN A+N++C +  + EA  LSTCNRFE+Y+AA D+ AA    T +L   SG+P   LR+NLF+LSG+DA+WH+MRV+GGLDSL+VGEGQILSQV+QC+ H +EEDG GGKV+SR+LN+AVAAGKRVRSET ISKG+VSISSAAVE S++   +DL   F E ++A +GAGKM+RLL+ H+AS+G++ +T++NR  +R + L  +FP+++++I+LMD+LW V+   D+VYT+TS    ++ +  +   GL  G+  ++VDISVPRNV     +I  + +YNVD LK VV RNTA R++++LEAE LL EE E F +W+ +L  +P + +LQE+A   R EELKK +++L+  NLSDKEL+ VERL++GIVNKLLHGPM+HLR TE +E     LK L A+F L
Sbjct:   69 LQVHVVGLSIHHAEVEVREKLAIPEAEWNAASNEICANGKVNEAAVLSTCNRFEVYYAATDARAAMAHVTQYLSERSGIPVSALRRNLFMLSGDDAVWHIMRVAGGLDSLIVGEGQILSQVRQCHLHSIEEDGCGGKVLSRLLNNAVAAGKRVRSETAISKGSVSISSAAVELSEMLSMKDLKLPFSECRLAAVGAGKMTRLLITHLASRGLEKITIVNRSLDRPKELQEQFPDIDIEIKLMDDLWDVVGRSDIVYTATSCVDYVIDEQKLDVNGLVGGRPLMLVDISVPRNVNENCNEIPNVKAYNVDDLKAVVARNTAMRQREILEAEKLLQEEAESFIAWREALSTIPTIYQLQERANEFRQEELKKCTRRLSSANLSDKELEAVERLSRGIVNKLLHGPMAHLRKTESIEGKQATLKELSAMFML 497
[Close]
BLAST of NO09G01210 vs. NCBI_GenBank
Match: GAX23756.1 (glutamyl-tRNA reductase [Fistulifera solaris])

HSP 1 Score: 471.1 bits (1211), Expect = 5.000e-129
Identity = 238/429 (55.48%), Postives = 327/429 (76.22%), Query Frame = 0 
Query:  158 LEVHVIGLSHHNAAVDVREKLSIPEAQWNDAANKLCESNVIAEACTLSTCNRFEIYFAAHDSYAAFHEATAFLERHSGLPQKVLRKNLFLLSGEDAIWHLMRVSGGLDSLVVGEGQILSQVKQCYNHGMEEDGKGGKVVSRMLNSAVAAGKRVRSETGISKGAVSISSAAVEFSQLRCPQDLGKTFEESKVAIIGAGKMSRLLMIHMASQGMKSVTLMNRGRERAETLAAEFPEMEVDIRLMDELWPVMHSHDVVYTSTSAQGCLLTKDNIQDAGLAPGK--VIVDISVPRNVETEVADIEGMYSYNVDHLKEVVDRNTATRKKQMLEAEDLLVEEMEKFRSWQFSLGAVPALMKLQEKAETMRMEELKKASKKLN--NLSDKELQTVERLTKGIVNKLLHGPMSHLRATEDLEKNLVALKTLKAVFEL 583
            L+VHV+GLS H+A V+VREKL+IPEA+WN A+N++C +  + EA  LSTCNRFE+Y+AA D+ AA    T +L   SG+P   LR+NLF+LSG+DA+WH+MRV+GGLDSL+VGEGQILSQV+QC+ H +EEDG GGKV+SR+LN+AVAAGKRVRSET ISKG+VSISSAAVE S++   +DL   F E ++A +GAGKM+RLL+ H+AS+G++ +T++NR  +R + L  +FP+++++I+LMD+LW V+   D+VYT+TS    ++ +  +   GL  G+  ++VDISVPRNV     +I  + +YNVD LK VV RNTA R++++LEAE LL EE E F +W+ +L  +P + +LQE+A   R EELKK +++L+  NLSDKEL+ VERL++GIVNKLLHGPM+HLR TE +E     LK L A+F L
Sbjct:   68 LQVHVVGLSIHHAEVEVREKLAIPEAEWNAASNEICANGKVNEAAVLSTCNRFEVYYAATDARAAMAHVTQYLSERSGIPVSSLRRNLFMLSGDDAVWHIMRVAGGLDSLIVGEGQILSQVRQCHLHSIEEDGCGGKVLSRLLNNAVAAGKRVRSETAISKGSVSISSAAVELSEMLSMKDLKLPFSECRLAAVGAGKMTRLLITHLASRGLEKITIVNRSLDRPKELQEQFPDIDIEIKLMDDLWDVVGRSDIVYTATSCVDYVIDEHKLDVNGLVGGRPLMLVDISVPRNVNENCNEIPNVKAYNVDDLKAVVARNTAMRQREILEAEKLLQEEAESFIAWREALSTIPTIYQLQERANEFRQEELKKCTRRLSNANLSDKELEAVERLSRGIVNKLLHGPMAHLRKTESIEGKQATLKELSAMFML 496
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BLAST of NO09G01210 vs. NCBI_GenBank
Match: OEU16007.1 (glutamyl-tRNA reductase [Fragilariopsis cylindrus CCMP1102])

HSP 1 Score: 470.3 bits (1209), Expect = 8.600e-129
Identity = 240/429 (55.94%), Postives = 326/429 (75.99%), Query Frame = 0 
Query:  158 LEVHVIGLSHHNAAVDVREKLSIPEAQWNDAANKLCESNVIAEACTLSTCNRFEIYFAAHDSYAAFHEATAFLERHSGLPQKVLRKNLFLLSGEDAIWHLMRVSGGLDSLVVGEGQILSQVKQCYNHGMEEDGKGGKVVSRMLNSAVAAGKRVRSETGISKGAVSISSAAVEFSQLRCPQDLGKTFEESKVAIIGAGKMSRLLMIHMASQGMKSVTLMNRGRERAETLAAEFPEMEVDIRLMDELWPVMHSHDVVYTSTSAQGCLLTKDNIQDAGLAPGK--VIVDISVPRNVETEVADIEGMYSYNVDHLKEVVDRNTATRKKQMLEAEDLLVEEMEKFRSWQFSLGAVPALMKLQEKAETMRMEELKKASKKL--NNLSDKELQTVERLTKGIVNKLLHGPMSHLRATEDLEKNLVALKTLKAVFEL 583
            L+VH +GLS H+A V+VREKL++PE  WN A+N++C+   IAEA  LSTCNRFEIY+AA D  AA    T FL   SGLP   LRKNLF+LSG+DA+WH+MRVSGGLDSL+VGEGQILSQV+QC+ H +EEDG GGKV+SR+LN+AVAAGKRVRSETGISKG+VS+SSAAVE S++    DL   F E+++A++GAG M+RLL+ H+AS+G++ +T++NR   R E LA +FP++E++I+LMD+LW V+   D+VYT+TS+   ++ +  +   GL+ G+  ++VDISVPRN+  +  ++     YNVD LK VV +NTA R+++MLEAE LL EE   + +W+ SL A+P + +LQE+A + R +EL KA++KL   NL+DKE++ VERL++GIVNKLLHGPM+HLR TE +E     LK L A+F L
Sbjct:   98 LQVHCVGLSIHHADVEVREKLAVPECDWNKASNEICDGGDIAEAAVLSTCNRFEIYYAASDPRAAMASVTKFLADRSGLPVAELRKNLFMLSGDDAVWHIMRVSGGLDSLIVGEGQILSQVRQCHLHSIEEDGCGGKVLSRLLNNAVAAGKRVRSETGISKGSVSVSSAAVELSEMLSLPDLNLPFSEARLAVVGAGTMTRLLITHLASRGLEKITIVNRSMARPEELAEQFPDVEIEIKLMDDLWDVIGRSDIVYTATSSVEYVIDEQKMMANGLSGGRPLMLVDISVPRNIGEDCKNVPNAKVYNVDDLKAVVAKNTAMRQREMLEAEILLKEEATSYFAWRESLSAIPTINQLQERANSFREQELAKATRKLANANLTDKEMEAVERLSRGIVNKLLHGPMAHLRKTESIEGKQQTLKELNAMFRL 526
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BLAST of NO09G01210 vs. NCBI_GenBank
Match: XP_002177785.1 (glutamyl-trna reductase [Phaeodactylum tricornutum CCAP 1055/1] >EEC50599.1 glutamyl-trna reductase [Phaeodactylum tricornutum CCAP 1055/1])

HSP 1 Score: 469.5 bits (1207), Expect = 1.500e-128
Identity = 260/535 (48.60%), Postives = 363/535 (67.85%), Query Frame = 0 
Query:   53 VTTAAFLAPATLPRNIAAPRAPPSGAGTAV-LDEGGFRTSSGLFVAPSTGSKVESSMRKRRVGAALKPLYAATVAPPISTGXXXXXXXXXXXXXXXXXXXATSMTPLEVHVIGLSHHNAAVDVREKLSIPEAQWNDAANKLCESNVIAEACTLSTCNRFEIYFAAHDSYAAFHEATAFLERHSGLPQKVLRKNLFLLSGEDAIWHLMRVSGGLDSLVVGEGQILSQVKQCYNHGMEEDGKGGKVVSRMLNSAVAAGKRVRSETGISKGAVSISSAAVEFSQLRCPQDLGKTFEESKVAIIGAGKMSRLLMIHMASQGMKSVTLMNRGRERAETLAAEFPEMEVDIRLMDELWPVMHSHDVVYTSTSAQGCLLTKDNIQDAGLAPGK--VIVDISVPRNVETEVADIEGMYSYNVDHLKEVVDRNTATRKKQMLEAEDLLVEEMEKFRSWQFSLGAVPALMKLQEKAETMRMEELKKASKKLN--NLSDKELQTVERLTKGIVNKLLHGPMSHLRATEDLEKNLVALKTLKAVFEL 583
            V+  A LA  T+P    +    PSG G  + L      TSS L VA   G ++    R+ R+ AA K                                       L+VH +GLS H+A+V+VREKL+I EA WN A+N++CE  V+AEA  LSTCNRFE+Y+AA D  AA    T++L   SGLP  VLR+NLF+LSG+DA+WH+MRV+GGLDSL+VGEGQILSQV+QCY H +E+DG GGKV++R+LN+A+AAGKRVRSET I+KG+VSISSAAVE S++   QDL   F E+++A++GAGKM+RLL+ H+AS+G++ +T++NR   R + L  +FP+++++++LM++LW V+   D+VYT+TSA   ++ +  ++  GL  G   ++VDI+VPRNV  +   +  + +YNVD LK VV +NTA R+++MLEAEDLL EE + F +W+ SL A+P + +LQE+A   R EELK+ ++KL+  NLS+KEL+ VERL++GIVNKLLHGPM+HLR TE +E     LK L A+F L
Sbjct:    4 VSIVATLAAVTVPTTSFS--VTPSGVGNRLRLRPAVVATSSALAVAADLG-EIRKRTREERLEAASK--------------------------------------GLQVHCVGLSIHHASVEVREKLAIAEADWNAASNQICEDGVVAEAAVLSTCNRFEVYYAATDPRAAMAHVTSYLANRSGLPVSVLRQNLFMLSGDDAVWHVMRVAGGLDSLIVGEGQILSQVRQCYLHSVEDDGCGGKVLARLLNNALAAGKRVRSETAIAKGSVSISSAAVELSEMLSQQDLQLPFSEARLAVVGAGKMTRLLVTHLASRGLERITIVNRSLGRPQELQEQFPDVDIEVKLMEDLWDVVGRSDIVYTATSAVDYVIDEQKLEANGLVGGHPLMLVDIAVPRNVGDDCKVLPNVAAYNVDDLKAVVAKNTAMRQREMLEAEDLLREETDAFVTWRESLSAIPTINQLQERANAFREEELKRCTRKLSGANLSEKELEAVERLSRGIVNKLLHGPMAHLRKTESVEGKQATLKELSAMFRL 497
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BLAST of NO09G01210 vs. NCBI_GenBank
Match: XP_002290024.1 (predicted protein [Thalassiosira pseudonana CCMP1335] >EED93561.1 predicted protein [Thalassiosira pseudonana CCMP1335])

HSP 1 Score: 465.7 bits (1197), Expect = 2.100e-127
Identity = 234/430 (54.42%), Postives = 326/430 (75.81%), Query Frame = 0 
Query:  158 LEVHVIGLSHHNAAVDVREKLSIPEAQWNDAANKLCESNVIAEACTLSTCNRFEIYFAAHDSYAAFHEATAFLERHSGLPQKVLRKNLFLLSGEDAIWHLMRVSGGLDSLVVGEGQILSQVKQCYNHGMEEDGKGGKVVSRMLNSAVAAGKRVRSETGISKGAVSISSAAVEFSQLRCPQDLGKTFEESKVAIIGAGKMSRLLMIHMASQGMKSVTLMNRGRERAETLAAEFPEMEVDIRLMDELWPVMHSHDVVYTSTSAQGCLLTKDNIQDAGLAPGK--VIVDISVPRNVETEVADIEGMYSYNVDHLKEVVDRNTATRKKQMLEAEDLLVEEMEKFRSWQFSLGAVPALMKLQEKAETMRMEELKKASKKL---NNLSDKELQTVERLTKGIVNKLLHGPMSHLRATEDLEKNLVALKTLKAVFEL 583
            L+VHVIGLS H+A V+VREKL+IPEA+WN+ +N +C +  + EA  LSTCNRFEIYFAA D++ A      +L   SGLP  VLR+N+F+L G+DA+WHLMRV+GGLDSLVVGEGQILSQV+QC+ H +EEDG GGKV+SR+LN+AVAAGKRVRSET ISKG+VSISSAAVE S+  C QDL   F E+++A++GAG M+RLL+ H+AS+G++ + ++NR  +R + L  +FP+++++I L+D+LW V+   D+VYT+TS+   ++ ++ ++  G   G+  ++VDI+VPRNV      I+G+  YNVD LK VV +NTA R+++M+EAE+LL EE + F  W+ SL A+P + +LQE+A   R EELKK ++KL   +N +D+EL+ VERL++GIVNK+LHGPM+HLR  E +E    ALK L ++F L
Sbjct:   90 LQVHVIGLSIHHAQVEVREKLAIPEAEWNEQSNIICSTGQVEEAAILSTCNRFEIYFAASDAHEANARVMEYLAERSGLPVSVLRRNIFMLEGDDAVWHLMRVAGGLDSLVVGEGQILSQVRQCHLHSIEEDGCGGKVLSRLLNNAVAAGKRVRSETNISKGSVSISSAAVELSEHMCMQDLNLPFSEARLAVVGAGTMTRLLVTHLASRGLERIAIVNRSMQRPQELQEQFPDVDIEIALVDQLWDVVGKSDIVYTATSSTDYVIDENLLEQNGQTGGRPLMLVDIAVPRNVGPGSGKIDGVVPYNVDDLKAVVAKNTAMRQREMIEAENLLREESDSFIGWRESLSAIPTINQLQERANMFRQEELKKCTRKLSQNDNFTDRELEAVERLSRGIVNKMLHGPMAHLRRAESVEGKQAALKELSSMFRL 519
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BLAST of NO09G01210 vs. NCBI_GenBank
Match: EJK49539.1 (hypothetical protein THAOC_31577 [Thalassiosira oceanica])

HSP 1 Score: 458.0 bits (1177), Expect = 4.400e-125
Identity = 232/430 (53.95%), Postives = 322/430 (74.88%), Query Frame = 0 
Query:  158 LEVHVIGLSHHNAAVDVREKLSIPEAQWNDAANKLCESNVIAEACTLSTCNRFEIYFAAHDSYAAFHEATAFLERHSGLPQKVLRKNLFLLSGEDAIWHLMRVSGGLDSLVVGEGQILSQVKQCYNHGMEEDGKGGKVVSRMLNSAVAAGKRVRSETGISKGAVSISSAAVEFSQLRCPQDLGKTFEESKVAIIGAGKMSRLLMIHMASQGMKSVTLMNRGRERAETLAAEFPEMEVDIRLMDELWPVMHSHDVVYTSTSAQGCLLTKDNIQDAGLAPGKVI--VDISVPRNVETEVADIEGMYSYNVDHLKEVVDRNTATRKKQMLEAEDLLVEEMEKFRSWQFSLGAVPALMKLQEKAETMRMEELKKASKKL---NNLSDKELQTVERLTKGIVNKLLHGPMSHLRATEDLEKNLVALKTLKAVFEL 583
            L+VHVIGLS H+A V+VREKL+IPEA+WN  +N +C +  + EA  LSTCNRFEIYFAA +++ A      +L   SGLP  VLR+N+F+L G+DA+WHLMRVSGGLDSLVVGEGQILSQV+QC+ H +E+DG GGKV+SR+LN+AVAAGKRVRSET ISKG+VSISSAAVE S+  C QDL   F E+++A+IGAG M+RLL+ H+AS+G++ ++++NR   R + L  +FP+++++I L D LW V+   D+V+T+TS+   ++ K  ++   L  G+ I  VDI+VPRN+  + +++  +  YNVD LK VV +NTA R+++M+EAE+LL++E   F  W+ SL A+P + +LQE+A   R EELKK ++KL   +N SD+EL+ VERL++GIVNK+LHGPM+HLR  E +EK   AL  L ++F L
Sbjct:   77 LQVHVIGLSIHHAQVEVREKLAIPEAEWNTQSNLICSTGQVEEAAILSTCNRFEIYFAASNAHEANARVMEYLAERSGLPVSVLRRNIFMLEGDDAVWHLMRVSGGLDSLVVGEGQILSQVRQCHLHSIEDDGCGGKVLSRLLNNAVAAGKRVRSETNISKGSVSISSAAVELSEAMCMQDLNLPFSEARLAVIGAGTMTRLLITHLASRGLERISIVNRSMARPKELQEQFPDVDIEIVLEDGLWDVVGRSDIVFTATSSPDYVIDKQLLEANNLNSGRAIMLVDIAVPRNIGPDCSELPAVTPYNVDDLKAVVAKNTAMRQREMIEAENLLLDEKNSFVGWRESLSAIPTINQLQERANMFRQEELKKCTRKLSQNDNFSDRELEAVERLSRGIVNKMLHGPMAHLRRAESVEKKQAALSELSSMFRL 506
[Close]
BLAST of NO09G01210 vs. NCBI_GenBank
Match: XP_005709872.1 (glutamyl-tRNA reductase [Chondrus crispus] >CDF39578.1 glutamyl-tRNA reductase [Chondrus crispus])

HSP 1 Score: 436.0 bits (1120), Expect = 1.800e-118
Identity = 224/422 (53.08%), Postives = 308/422 (72.99%), Query Frame = 0 
Query:  163 IGLSHHNAAVDVREKLSIPEAQWNDAANKLCESNVIAEACTLSTCNRFEIYFAAHDSYAAFHEATAFLERHSGLPQKVLRKNLFLLSGEDAIWHLMRVSGGLDSLVVGEGQILSQVKQCYNHGMEEDGKGGKVVSRMLNSAVAAGKRVRSETGISKGAVSISSAAVEFSQLRCPQDLGKTFEESKVAIIGAGKMSRLLMIHMASQGMKSVTLMNRGRERAETLAAEFPEMEVDIRLMDELWPVMHSHDVVYTSTSAQGCLLTKDNIQDAGLAP--GKVIVDISVPRNVETEVADIEGMYSYNVDHLKEVVDRNTATRKKQMLEAEDLLVEEMEKFRSWQFSLGAVPALMKLQEKAETMRMEELKKASKKLNNLSDKELQTVERLTKGIVNKLLHGPMSHLRATEDLEKNLVALKTLKAVFEL 583
            +GLSHH A VDVRE+L++PEA+W  AA +LCE   I+EA  LSTCNRFE+Y  A   + A  E  A L   SGL    LRK+LF+L+ ++A WHLMRVS GLDSLV+GEGQILSQVK+CY    + DG  GK++ R+LN+AV+AGKRVRSETGI+KGAVSISSAAVE ++++   DL    +++KV I+GAGKMSRLL+ H+ S+G+  +T++NR   RAE LA  FP+  + I+L+D +   + + D+++TST+A   +LTKD +  A L P    +++DISVPRNV  +VA+I+ M+SYNVD LK VV +N A R++ MLEAEDLL EE+  F +W  SLG +PA+ KLQ++AE++R +E+ +   KL++LS  EL+ VE+L+KGI+NK+LH PM HLR   DLE+    LK ++A+F+L
Sbjct:    1 MGLSHHTATVDVRERLAVPEAEWQIAAERLCECAAISEAAVLSTCNRFEVYIVADHPFKAIQEVVAHLSSRSGLSVTELRKHLFMLTEDEASWHLMRVSAGLDSLVIGEGQILSQVKKCYELASDADGHAGKILQRLLNNAVSAGKRVRSETGIAKGAVSISSAAVELAEMKAVPDLDLPLKDAKVCILGAGKMSRLLVQHLLSRGVADITIVNRSIGRAEELAKMFPDASLHIKLLDSMIESVATSDIIFTSTAASAPILTKDMLTPA-LDPLRRSIVIDISVPRNVSDDVAEIDNMFSYNVDDLKAVVAKNQARRRRLMLEAEDLLREELATFNNWHNSLGCIPAISKLQQRAESIRQDEMDRVKGKLSDLSASELKAVEQLSKGIINKMLHSPMVHLRGLADLEERTQTLKNIEALFKL 421
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BLAST of NO09G01210 vs. NCBI_GenBank
Match: XP_023263936.1 (uncharacterized protein LOC111656458 [Seriola lalandi dorsalis])

HSP 1 Score: 435.3 bits (1118), Expect = 3.100e-118
Identity = 236/430 (54.88%), Postives = 305/430 (70.93%), Query Frame = 0 
Query:  162 VIGLSHHNAAVDVREKLSIPEAQWNDAANKLCESNVIAEACTLSTCNRFEIYFAAHDSYAAFHEATAFLERHSGLPQKVLRKNLFLLSGEDAIWHLMRVSGGLDSLVVGEGQILSQVKQCYNHGM------EEDGKGGKVVSRMLNSAVAAGKRVRSETGISKGAVSISSAAVEFSQLRCPQDLGKTFEESKVAIIGAGKMSRLLMIHMASQGMKSVTLMNRGRERAETLAAEFPEMEVDIRLMDELWPVMHSHDVVYTSTSAQGCLLTKDNIQDAG----LAPGKVIVDISVPRNVETEVADIEGMYSYNVDHLKEVVDRNTATRKKQMLEAEDLLVEEMEKFRSWQFSLGAVPALMKLQEKAETMRMEELKKASKKLNNLSDKELQTVERLTKGIVNKLLHGPMSHLRATEDLEKNLVALKTLKAVFE 582
            VIGLSH  A V+VREKLSIPEAQWN+AA  L     + EA  LSTCNRFE+Y  A D YAA  +  +FL  HSGL  + LR NLF+L  E+A  HL+RVS GLDSLVVGEGQILSQVK CY+H +      E  G  GKV+ R+LNSAV AGK VRSET I+KGAVSISSAAVE + LR P DLG   E + V +IGAGKMSRLL+ H+AS G+  V L+NRGR RAE LAAE PE++V + LMDELWP +   D+ +TSTSA GC++T   +++ G     A    ++DISVPRNV+ E  D+  +++YNVD LK+VV +N A R++++LEAE LL +++ +F +WQ SL  VPA+ +LQ K E++R  EL+KA+KKL +L  K+ Q VE LTKGI+NKLLH PM++LR ++D +     +  + A+F+
Sbjct:   32 VIGLSHKTATVEVREKLSIPEAQWNEAAAALVGYETVQEAAILSTCNRFEVYIVAEDHYAATRDVLSFLRGHSGLEAETLRPNLFMLQDEEATLHLLRVSSGLDSLVVGEGQILSQVKACYSHAIAPESESEPAGSAGKVLGRLLNSAVMAGKFVRSETQIAKGAVSISSAAVELAVLRAPLDLGMPLESTSVCVIGAGKMSRLLLTHLASHGVTKVKLLNRGRARAEELAAEHPELDVQVGLMDELWPSLQECDLAFTSTSATGCIVTGAELRERGWDDEAARPLSLIDISVPRNVDAECNDVSAVHAYNVDDLKQVVAKNQARRREKVLEAEVLLRDKLAEFVAWQGSLQYVPAISQLQAKFESVRASELEKATKKLKSLDPKQRQAVEVLTKGIINKLLHAPMTYLR-SDDADGTKATVDQINALFQ 460
The following BLAST results are available for this feature:
BLAST of NO09G01210 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM27669.17.300e-25383.84glutamyl-trna reductase [Nannochloropsis gaditana][more]
CBN76275.18.900e-13458.58Glutamyl-tRNA Reductase, chloroplast precursor [Ec... [more]
GAX14965.12.300e-12955.48glutamyl-tRNA reductase [Fistulifera solaris][more]
GAX23756.15.000e-12955.48glutamyl-tRNA reductase [Fistulifera solaris][more]
OEU16007.18.600e-12955.94glutamyl-tRNA reductase [Fragilariopsis cylindrus ... [more]
XP_002177785.11.500e-12848.60glutamyl-trna reductase [Phaeodactylum tricornutum... [more]
XP_002290024.12.100e-12754.42predicted protein [Thalassiosira pseudonana CCMP13... [more]
EJK49539.14.400e-12553.95hypothetical protein THAOC_31577 [Thalassiosira oc... [more]
XP_005709872.11.800e-11853.08glutamyl-tRNA reductase [Chondrus crispus] >CDF395... [more]
XP_023263936.13.100e-11854.88uncharacterized protein LOC111656458 [Seriola lala... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL119nonsL119Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR021ncniR021Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR127ngnoR127Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK010606NSK010606Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO09G01210.1NO09G01210.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|589090gene_4433Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100125g4gene2897Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO09G01210.1NO09G01210.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO09G01210 ID=NO09G01210|Name=NO09G01210|organism=Nannochloropsis oceanica|type=gene|length=1749bp
ATGTGCCCTCTCCGCATCTTCTTCGCCTTGTTGCAGCTCCACCTGCTCTT
CATGCTAGGCATGAGTGGTAGCTCTGCGGCGTCCGCGAGCAGTGCCAAAG
CTGGCGGCCGCAACTGCCCTTTCCGAGGCTGGGGTGGGAGCAAGGCCACG
AACACGGTGACGACCGCCGCCTTCTTGGCTCCGGCCACCCTTCCCCGCAA
CATCGCCGCCCCCCGTGCACCACCCAGCGGTGCCGGCACCGCCGTTTTGG
ATGAGGGCGGGTTCCGCACGTCTTCGGGGCTCTTTGTGGCGCCCTCAACG
GGCAGCAAGGTGGAATCCTCGATGCGCAAGCGTCGCGTGGGGGCTGCTCT
GAAGCCGCTCTATGCGGCAACCGTTGCCCCTCCTATTTCGACTGGCGTGG
TGGCCGCGGCAGCTGAAAAGGAGGAGAAAGCAGAAGGCAAGAAGAAGCGC
AAGGCCACGAGCATGACGCCTTTGGAAGTGCATGTGATTGGCTTGTCGCA
CCACAACGCCGCGGTGGATGTACGTGAGAAGCTCTCCATTCCCGAAGCGC
AATGGAACGACGCCGCCAACAAATTGTGTGAGAGCAATGTCATCGCTGAG
GCCTGCACCCTGTCGACGTGCAATCGTTTCGAGATCTACTTTGCGGCTCA
TGATTCCTACGCTGCCTTTCACGAGGCGACAGCTTTCTTGGAGCGTCACT
CGGGCCTGCCCCAGAAAGTTTTAAGAAAGAATTTGTTCCTCCTGTCGGGG
GAGGATGCTATCTGGCACTTGATGCGGGTATCAGGCGGCTTGGACTCGCT
GGTGGTAGGGGAGGGTCAGATTTTGAGTCAGGTGAAACAGTGCTATAACC
ACGGGATGGAGGAGGATGGGAAGGGCGGCAAAGTCGTGTCGCGGATGCTG
AACTCGGCCGTGGCGGCCGGGAAGCGTGTGCGCTCTGAAACGGGAATCAG
CAAGGGTGCTGTCTCCATTTCGTCAGCTGCGGTAGAGTTTTCTCAATTGC
GTTGCCCCCAGGACTTGGGAAAGACGTTTGAGGAAAGTAAGGTGGCCATT
ATTGGCGCGGGGAAAATGTCAAGGTTACTCATGATCCACATGGCGTCCCA
AGGCATGAAGAGCGTGACGCTGATGAACCGAGGAAGGGAGAGGGCAGAGA
CCTTGGCTGCGGAATTTCCCGAGATGGAGGTGGACATCCGACTGATGGAT
GAGTTGTGGCCGGTCATGCACTCGCATGACGTGGTCTACACCTCGACCTC
AGCGCAAGGGTGCTTGCTTACCAAGGACAACATCCAAGACGCTGGTTTGG
CTCCCGGTAAAGTCATTGTCGACATATCTGTCCCCCGCAATGTGGAGACG
GAGGTGGCTGACATAGAGGGCATGTATTCGTACAACGTGGATCATCTGAA
AGAGGTGGTTGACCGCAACACAGCCACGCGCAAGAAGCAGATGCTCGAGG
CGGAGGATTTGCTGGTGGAAGAGATGGAGAAATTTCGCTCGTGGCAGTTC
TCTCTCGGCGCAGTCCCGGCGCTGATGAAGCTCCAGGAGAAGGCAGAGAC
GATGCGGATGGAGGAGTTGAAAAAGGCGTCGAAAAAACTCAATAATCTCT
CGGACAAGGAACTCCAGACGGTTGAGAGGTTGACCAAGGGGATTGTGAAC
AAGCTGCTGCACGGACCTATGTCCCACTTAAGGGCAACGGAGGACTTGGA
GAAGAACCTAGTGGCGCTGAAGACATTGAAGGCCGTGTTTGAGCTCTAA
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protein sequence of NO09G01210.1

>NO09G01210.1-protein ID=NO09G01210.1-protein|Name=NO09G01210.1|organism=Nannochloropsis oceanica|type=polypeptide|length=583bp
MCPLRIFFALLQLHLLFMLGMSGSSAASASSAKAGGRNCPFRGWGGSKAT
NTVTTAAFLAPATLPRNIAAPRAPPSGAGTAVLDEGGFRTSSGLFVAPST
GSKVESSMRKRRVGAALKPLYAATVAPPISTGVVAAAAEKEEKAEGKKKR
KATSMTPLEVHVIGLSHHNAAVDVREKLSIPEAQWNDAANKLCESNVIAE
ACTLSTCNRFEIYFAAHDSYAAFHEATAFLERHSGLPQKVLRKNLFLLSG
EDAIWHLMRVSGGLDSLVVGEGQILSQVKQCYNHGMEEDGKGGKVVSRML
NSAVAAGKRVRSETGISKGAVSISSAAVEFSQLRCPQDLGKTFEESKVAI
IGAGKMSRLLMIHMASQGMKSVTLMNRGRERAETLAAEFPEMEVDIRLMD
ELWPVMHSHDVVYTSTSAQGCLLTKDNIQDAGLAPGKVIVDISVPRNVET
EVADIEGMYSYNVDHLKEVVDRNTATRKKQMLEAEDLLVEEMEKFRSWQF
SLGAVPALMKLQEKAETMRMEELKKASKKLNNLSDKELQTVERLTKGIVN
KLLHGPMSHLRATEDLEKNLVALKTLKAVFEL*
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Synonyms
Publications