NO09G01180, NO09G01180 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO09G01180 vs. NCBI_GenBank
Match: EWM27666.1 (Tesmin/TSO1-like cysteine-rich [Nannochloropsis gaditana]) HSP 1 Score: 521.9 bits (1343), Expect = 3.300e-144 Identity = 373/825 (45.21%), Postives = 443/825 (53.70%), Query Frame = 0 Query: 1 MAATNQAPSIEEESEAAKALWEITNSPGLTNKGPSCLTPRGPACRDHPLGFPTPQGVGQGSPSMNYNRFFSPSQFSWSPLPGHSPAPQPNAVXXXXXXXXXXXXXXXXXXXXXXXXXXEIAHSGMGTGAEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYSKKLDFAVPSSEKASRVWLSLDTESQRVARTGPRAAPPASPAVAGGG---RDSHFFVTQSPFKYQGDGLEDFFASSTG-----------------VSNSENGSTGDXXXXXXXXRRGGRPGGETTVNVSLCEAQKDVVVDHQQKWEEESXXGREEGQQLQAVELVTDETSRLSYYGSGDSRGLPFTPLPVNAIAMNQHGGSNWGGIQVRVKKTTPSHTLHHNNTSLLDALAAMVPLHDDASHSPSSLPTLSSNTLPSTGTYHSSMPPPQSPRTTTSASRGKFVPGSPVLEAMAMVALSQSPSVFPSDRKKKKTSLRGPHSAPRVLIPHDSSIGTSSFSSLGSNITITSASATAADA-----ASHPYQTPNSITKKALHLVAAGRNNSPDRSNCNCKKSRCLKLYCECFRGGFTCGASCKCQNCANIPEFEAERIEAREKIEE--XXXXXXXXGRQSLGRGKEGLGNCLIAASPLVSAADVEKQQK-----------EHEQEALVPMPLSHSHATRHSTRFAGTP----ATSATLGAGGHIIFTLKQSLSSSPSSSSCLSTATMTPVQHRMGKRKNKGEEDAAAATVSVAL-SKPLRRTTPSKG-GRKDEFLLSVFGPRSKINKQNSLEVLSYLDGDDMADACLVSSLWNRLALETLDE 782 MAA Q+PS+E+ESEAAKALWEITNSPGL KG SCLTPRGPA RD+ +GFPTPQG+G GSPS+NYNRFFSPSQFSWSPLPG SPA Q + S T YSKKLDFA EKAS VWLSLD+E+QRVAR GP AAPPASPA A G R+SHFFV++SPFK Q + E F ASS G ++S+N T G + E + C Q+D + + +E +E Q+L A E++ +E + + +G+ + LP P PV I MN+HGGSNWGGIQVRVKK P H+L + SLL+A+AAM+P + +S P + + MPPPQSPRTTT ASRG F PGSPVLEAMAMV LSQSPSVF SDRKK S R SAPRVL+P S S I SA A A++ A YQTP + +K + +P +C CKKSRCLKLYCECFRGGFTC SCKCQNCAN+ E EAER EA +KI E GR G +G N + + + D++ K E E+E S S AT A P T T ++IFT+K SP + T TPVQ R KRKN G+ T + + KP R T +G GRKDEFLLSVFGPRS++NKQNSLEVLSYLD DDMADA LVSSLWNRLALETLDE Sbjct: 1 MAAARQSPSLEDESEAAKALWEITNSPGLAKKGSSCLTPRGPAGRDYLMGFPTPQGLGHGSPSVNYNRFFSPSQFSWSPLPGQSPALQ-------SLSSHSYDCQSSQHPPSMPSFFSSMPQSSSITNLSEKDTLNRHVQEATTSKVLHRDATGVTIGERETKKKAYSKKLDFAGTCDEKASCVWLSLDSETQRVARGGPGAAPPASPAAALQGSIMRESHFFVSRSPFKQQAEDYEGFLASSAGRGAESINENDFACKNGRTASSKNRGTPIQSNLDKSKTNGDKCEIELGGHCKGCAEQEDGAISVSGQKQENKD---DEEQRLHAAEVLLNEATGIKLWGA--RQNLP-PPPPVKTIPMNKHGGSNWGGIQVRVKKKAPQHSL-SADPSLLEAIAAMIPSREASSSPPQT---------------NFGMPPPQSPRTTT-ASRGGFAPGSPVLEAMAMVTLSQSPSVFSSDRKKGNAS-RPCLSAPRVLMP--------STQEPFSGIQNFSAGAPASEPVRVLDAGMQYQTPTTGSKNS--YCERRSEGTPSSGSCCCKKSRCLKLYCECFRGGFTCQPSCKCQNCANVAECEAERAEAVDKIMEKKRRKSAGSAGRMQGGSSLDGEMNSVAGSPSSLRGLDLDSGVKIGSRPYVVRASEQEREFYEAAFSSTSLATELDAHMARRPRPSIGTGITSRGTSNVIFTVK-----SPDT-------TFTPVQRR-SKRKNVGD-----GTPDIPVPGKPARPTPKGRGTGRKDEFLLSVFGPRSRVNKQNSLEVLSYLDRDDMADASLVSSLWNRLALETLDE 766
BLAST of NO09G01180 vs. NCBI_GenBank
Match: XP_002287247.1 (predicted protein [Thalassiosira pseudonana CCMP1335] >EED94690.1 predicted protein [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 75.9 bits (185), Expect = 6.300e-10 Identity = 71/254 (27.95%), Postives = 114/254 (44.88%), Query Frame = 0 Query: 533 SNCNCKKSRCLKLYCECFRGGFTCGASCKCQNCANIPEFEAERIEAREKIEEXXXXXXXXGRQSLGRGKEG-LGNCLIAASPLVSAADVEKQQKEHEQEALVPMPLSHSHATRHSTRFAGTPATSATLGAGGHIIFTLKQSLSSSPSSSSCLSTATMTPVQH---RMGKRK----NKGEEDAAAATVSVALSKPLRRTTPSKGGRKDEFLLSVFGP-RSKINKQNSLEVLSYLDGDDMADACLVSSLWNRLALE 778 + C CKKS CLK YCECF CG SCKC NC N +A IE R K+++ + + RG +G + + +A P S V + H ++ P+ FA +PA+S G + + QS + + S++ TP + RM + ++ A A + +V + K +R P K E + FGP + K + +L+V SYL+ +++ A + S W+ LA + Sbjct: 929 TGCKCKKSECLKKYCECFANLVVCGESCKCSNCKNYVGSQA-LIERRRKLKD--AKGTELAMRPVARGWKGSMSDSKVAYGPGQSPV-VHNPRMPHPAATMMMSPMQ---------PFAASPASSFPRPHGVYAHGAMIQSAQPHSAPRAAFSSSMATPAKQYTSRMNPPRALVVSQTVIAAPAPSAAVVVRKARKRLQPP--SIKVEAREAFFGPIQPKQTRSVALKVFSYLNNEELYCASIASKTWSSLAFD 1167
BLAST of NO09G01180 vs. NCBI_GenBank
Match: XP_010670664.1 (PREDICTED: protein tesmin/TSO1-like CXC 2 [Beta vulgaris subsp. vulgaris] >XP_010670665.1 PREDICTED: protein tesmin/TSO1-like CXC 2 [Beta vulgaris subsp. vulgaris] >KMT16813.1 hypothetical protein BVRB_2g043000 [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 74.7 bits (182), Expect = 1.400e-9 Identity = 30/49 (61.22%), Postives = 37/49 (75.51%), Query Frame = 0 Query: 535 CNCKKSRCLKLYCECFRGGFTCGASCKCQNCANIPEFEAERIEAREKIE 584 CNCKK++CLKLYC+CF GF CG SC CQ C N PE+E +E R++IE Sbjct: 462 CNCKKTKCLKLYCDCFAAGFYCGESCACQGCFNRPEYEDTVLETRQQIE 510
BLAST of NO09G01180 vs. NCBI_GenBank
Match: PSS17774.1 (Protein tesmin/TSO1-like [Actinidia chinensis var. chinensis]) HSP 1 Score: 72.8 bits (177), Expect = 5.400e-9 Identity = 31/61 (50.82%), Postives = 40/61 (65.57%), Query Frame = 0 Query: 523 AAGRNNSPDRSNCNCKKSRCLKLYCECFRGGFTCGASCKCQNCANIPEFEAERIEAREKIE 584 A+ N+ +CNCKKSRCLKLYC+CF G C SC CQ C N PE+E ++ R++IE Sbjct: 642 ASAANDGDGCKSCNCKKSRCLKLYCDCFAAGLYCVESCACQECLNRPEYEDTVLDTRQQIE 702
BLAST of NO09G01180 vs. NCBI_GenBank
Match: XP_011466742.1 (PREDICTED: protein tesmin/TSO1-like CXC 2 [Fragaria vesca subsp. vesca]) HSP 1 Score: 72.4 bits (176), Expect = 7.000e-9 Identity = 33/59 (55.93%), Postives = 38/59 (64.41%), Query Frame = 0 Query: 525 GRNNSPDRSNCNCKKSRCLKLYCECFRGGFTCGASCKCQNCANIPEFEAERIEAREKIE 584 G S CNCKKS+CLKLYCECF G C SC C+NC N PEFE +AR++IE Sbjct: 410 GAEISEGCKRCNCKKSKCLKLYCECFAAGVFCLDSCSCENCYNKPEFEDTVFDARQQIE 468
BLAST of NO09G01180 vs. NCBI_GenBank
Match: XP_024179390.1 (CRC domain-containing protein TSO1-like [Rosa chinensis] >PRQ50754.1 putative transcription factor Tesmin family [Rosa chinensis]) HSP 1 Score: 72.0 bits (175), Expect = 9.100e-9 Identity = 33/59 (55.93%), Postives = 38/59 (64.41%), Query Frame = 0 Query: 525 GRNNSPDRSNCNCKKSRCLKLYCECFRGGFTCGASCKCQNCANIPEFEAERIEAREKIE 584 G S CNCKKS+CLKLYCECF G C SC C+NC N PEFE +AR++IE Sbjct: 442 GAEISEGCKRCNCKKSKCLKLYCECFAAGVFCLDSCACENCYNKPEFEDTVFDARQQIE 500
BLAST of NO09G01180 vs. NCBI_GenBank
Match: XP_015972004.1 (CRC domain-containing protein TSO1 [Arachis duranensis]) HSP 1 Score: 71.6 bits (174), Expect = 1.200e-8 Identity = 29/49 (59.18%), Postives = 36/49 (73.47%), Query Frame = 0 Query: 535 CNCKKSRCLKLYCECFRGGFTCGASCKCQNCANIPEFEAERIEAREKIE 584 CNCKKS+CLKLYC+CF G C C CQ+C N PE+E + IE R++IE Sbjct: 495 CNCKKSKCLKLYCDCFAAGIYCADDCSCQSCLNRPEYENKVIETRKQIE 543
BLAST of NO09G01180 vs. NCBI_GenBank
Match: XP_016162685.1 (protein tesmin/TSO1-like CXC 2 [Arachis ipaensis]) HSP 1 Score: 71.6 bits (174), Expect = 1.200e-8 Identity = 29/49 (59.18%), Postives = 36/49 (73.47%), Query Frame = 0 Query: 535 CNCKKSRCLKLYCECFRGGFTCGASCKCQNCANIPEFEAERIEAREKIE 584 CNCKKS+CLKLYC+CF G C C CQ+C N PE+E + IE R++IE Sbjct: 495 CNCKKSKCLKLYCDCFAAGIYCADDCSCQSCLNRPEYENKVIETRKQIE 543
BLAST of NO09G01180 vs. NCBI_GenBank
Match: XP_020974988.1 (protein tesmin/TSO1-like CXC 2 [Arachis ipaensis]) HSP 1 Score: 71.6 bits (174), Expect = 1.200e-8 Identity = 32/72 (44.44%), Postives = 45/72 (62.50%), Query Frame = 0 Query: 512 NSITKKALHLVAAGRNNSPDRSNCNCKKSRCLKLYCECFRGGFTCGASCKCQNCANIPEFEAERIEAREKIE 584 +S+ K+ H R+N+ C CKK++CL+LYCECF+ G C SC C+NC N PE + EA++KIE Sbjct: 89 SSVAKEQEHANDQERDNNDGNRGCKCKKTKCLQLYCECFKAGKYCKDSCSCENCLNRPENKDSVNEAKKKIE 160
BLAST of NO09G01180 vs. NCBI_GenBank
Match: XP_009828279.1 (hypothetical protein H257_05188 [Aphanomyces astaci] >ETV82610.1 hypothetical protein H257_05188 [Aphanomyces astaci]) HSP 1 Score: 70.9 bits (172), Expect = 2.000e-8 Identity = 29/47 (61.70%), Postives = 35/47 (74.47%), Query Frame = 0 Query: 532 RSNCNCKKSRCLKLYCECFRGGFTCGASCKCQNCANIPEFEAERIEA 579 R+ CNCKKS+CLKLYCECF G C +CKC C NIP+F+ +R EA Sbjct: 448 RNPCNCKKSQCLKLYCECFASGSVCDENCKCVGCHNIPKFDIQRKEA 494 The following BLAST results are available for this feature:
BLAST of NO09G01180 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO09G01180 ID=NO09G01180|Name=NO09G01180|organism=Nannochloropsis oceanica|type=gene|length=4835bpback to top protein sequence of NO09G01180.1 >NO09G01180.1-protein ID=NO09G01180.1-protein|Name=NO09G01180.1|organism=Nannochloropsis oceanica|type=polypeptide|length=782bpback to top protein sequence of NO09G01180.2 >NO09G01180.2-protein ID=NO09G01180.2-protein|Name=NO09G01180.2|organism=Nannochloropsis oceanica|type=polypeptide|length=679bpback to top Synonyms
Publications
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