NO09G01160, NO09G01160 (gene) Nannochloropsis oceanica

Overview
NameNO09G01160
Unique NameNO09G01160
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1254
Alignment locationchr9:372855..374108 -

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Properties
Property NameValue
DescriptionNicotinamide N-methyltransferase, putative
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr9genomechr9:372855..374108 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR019410Nicotinamide_N-MeTfrase-like
Vocabulary: Biological Process
TermDefinition
GO:0032259methylation
Vocabulary: Molecular Function
TermDefinition
GO:0016740transferase activity
GO:0008168methyltransferase activity
Homology
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BLAST of NO09G01160 vs. NCBI_GenBank
Match: EWM27662.1 (Nicotinamide N-methyltransferase, putative [Nannochloropsis gaditana])

HSP 1 Score: 277.7 bits (709), Expect = 5.900e-71
Identity = 176/410 (42.93%), Postives = 223/410 (54.39%), Query Frame = 0 
Query:    1 MMSTQAEIASSSPPSHCTQEQSTRVLWIGSRAAGTLMMQIQCCESFKGELLNSAAGDAHVDRTGLLLWPGSFLMCAYLLAARASLRKAGTLRHVVELGAGATGLAGSLLAHFSYERPSGSSSGISRPRVTLTDGDPESVALLSYNAKHHFRGGREMRLDGNNTTMSMAPYADIVVQRLRWGNQNEIKALGSGIDRTASFVLGSDILYPSIPPAVISQLLHSVRTLLTSGDELSNMQDTAQEKDAVKHMVKLKGRFVLSFLDRDNKATLRHLLLALREERFQIEEVVTGSDLFADEKEGFMVIEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRRVQMMGGGSVFVLFPLPLADIEDEAMSISALKASEA-RWFRDIWKVAPPEVEVEEWQAPLMSDD 410
            MMS Q     ++  S   Q +  RV  IGS AAG L  +I+CCESF+GELLN   GD+HVDRTGLLLWPGSFL+CAYLL+ R  L +   ++HVVELGAG+TGLAG LL+H S           +R R+TLTDGD ESV LL  NA++H R              S A  A++ V RLRWGN+ E  +L  G +   S ++GSDILYPSI    I QLL  VR LL S +        A +    K   + +GRFVLSF+DRDNKATLR+ +  LR E +++E+V+ G+ L  +  E   V E                                          R V MM GG V VL PL    I  E +  +    S A RWFRD+W+ APP  EVEEW+ PL++D+
Sbjct:    1 MMSPQESFPEAT--SESKQPRGMRVFIIGSEAAGYLRFRIECCESFRGELLNGGEGDSHVDRTGLLLWPGSFLLCAYLLSRRKVLVETSVIQHVVELGAGSTGLAGLLLSHLSLPSNPFGPKNPARRRITLTDGDLESVTLLQCNARNHHREADITLCSSKFVDFSAALTAELAVMRLRWGNREEASSLVRGEEPPVSLIIGSDILYPSISQDNIRQLLQCVRVLLLSRNGKEKTTVGAAKVRPSKE-PQPRGRFVLSFIDRDNKATLRNFVNTLRIENYEVEDVIDGTSLLVEGDEKISVEE------------------EEEVEERDSEAIQKDMGLSEHTRRRTVPMMMGGVVMVLRPLTGDVIGGEGVGTAEHGPSWADRWFRDLWEEAPP-CEVEEWEPPLLTDE 388
The following BLAST results are available for this feature:
BLAST of NO09G01160 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 1
Match NameE-valueIdentityDescription
EWM27662.15.900e-7142.93Nicotinamide N-methyltransferase, putative [Nannoc... [more]
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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL119nonsL119Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR021ncniR021Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR127ngnoR127Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK010600NSK010600Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO09G01160.1NO09G01160.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|670800gene_4439Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100125g11gene2891Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO09G01160.1NO09G01160.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO09G01160 ID=NO09G01160|Name=NO09G01160|organism=Nannochloropsis oceanica|type=gene|length=1254bp
ATGATGTCGACACAGGCAGAAATTGCATCCTCATCGCCACCATCTCATTG
CACACAAGAGCAAAGCACCCGGGTCCTATGGATTGGAAGCCGAGCCGCCG
GCACCCTGATGATGCAGATCCAGTGCTGCGAGTCCTTTAAGGGTGAACTT
TTAAACAGTGCGGCTGGTGACGCACATGTAGATCGCACCGGCCTTCTACT
TTGGCCTGGCTCCTTTTTAATGTGTGCATATCTTCTGGCAGCGCGCGCAT
CACTGAGGAAGGCAGGAACTCTCCGACATGTGGTAGAGCTTGGTGCAGGG
GCGACGGGTTTAGCAGGCTCACTACTGGCGCATTTTTCTTATGAGCGGCC
CTCCGGTTCCAGCAGCGGAATATCGCGACCGCGCGTCACTCTCACGGATG
GTGATCCAGAAAGCGTGGCACTTCTCTCGTATAACGCCAAGCATCATTTT
AGAGGAGGGAGGGAAATGAGACTTGACGGCAACAACACGACTATGTCCAT
GGCACCTTACGCTGACATCGTGGTGCAGCGGCTGCGGTGGGGCAACCAGA
ATGAAATTAAAGCCCTTGGCTCAGGAATTGATCGTACAGCCTCATTTGTG
CTTGGCAGCGACATTCTCTATCCCTCCATCCCACCAGCCGTGATATCTCA
ACTGTTACATTCCGTGCGAACTTTGCTAACTTCTGGAGATGAGTTATCAA
ATATGCAAGACACTGCTCAAGAGAAAGATGCTGTCAAACACATGGTCAAA
TTGAAGGGGCGATTTGTTCTCAGCTTCCTAGATCGAGACAACAAGGCCAC
GCTTCGCCATCTCCTCCTCGCGTTGCGGGAGGAACGGTTTCAAATAGAGG
AAGTGGTGACCGGGAGCGACCTCTTTGCAGATGAGAAAGAAGGGTTTATG
GTGATTGAGGAGGAAGAAGAGGAGGAGGGGGAGATTAATTGTGGTGATGA
TGAGGAGGATGAGGGGGAGGAAGAGGGGAGAAAGGAGGGGGAAGGAGGGG
AGGCAGGTAGAGGAGGTTTCCGGGGACGGCACCGTCGGAGAGTCCAAATG
ATGGGAGGTGGCAGCGTCTTTGTGTTATTTCCTTTGCCTCTCGCTGATAT
TGAGGATGAAGCTATGTCTATTTCTGCTTTAAAAGCGTCTGAAGCACGTT
GGTTTCGGGACATATGGAAGGTCGCCCCACCAGAAGTGGAAGTGGAGGAA
TGGCAAGCCCCGCTCATGAGTGATGACGAGGAAGAGGAAAATGACGTGAC
ATGA
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protein sequence of NO09G01160.1

>NO09G01160.1-protein ID=NO09G01160.1-protein|Name=NO09G01160.1|organism=Nannochloropsis oceanica|type=polypeptide|length=418bp
MMSTQAEIASSSPPSHCTQEQSTRVLWIGSRAAGTLMMQIQCCESFKGEL
LNSAAGDAHVDRTGLLLWPGSFLMCAYLLAARASLRKAGTLRHVVELGAG
ATGLAGSLLAHFSYERPSGSSSGISRPRVTLTDGDPESVALLSYNAKHHF
RGGREMRLDGNNTTMSMAPYADIVVQRLRWGNQNEIKALGSGIDRTASFV
LGSDILYPSIPPAVISQLLHSVRTLLTSGDELSNMQDTAQEKDAVKHMVK
LKGRFVLSFLDRDNKATLRHLLLALREERFQIEEVVTGSDLFADEKEGFM
VIEEEEEEEGEINCGDDEEDEGEEEGRKEGEGGEAGRGGFRGRHRRRVQM
MGGGSVFVLFPLPLADIEDEAMSISALKASEARWFRDIWKVAPPEVEVEE
WQAPLMSDDEEEENDVT*
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Synonyms
Publications