NO09G01140, NO09G01140 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
Homology
BLAST of NO09G01140 vs. NCBI_GenBank
Match: CBN78451.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 114.8 bits (286), Expect = 2.000e-22 Identity = 65/132 (49.24%), Postives = 79/132 (59.85%), Query Frame = 0 Query: 1 MKTFCILLALVALFNFSNAFM-PKAPVHTARPVVARGRTMKMMEES-----TYWEGKAPPSVVLGPFLSKIPSGVLGPASLVALIVGSYCTHESNIFNTLTVDTIYPAYVLGSFLTPISWGLHVAAWIQKMN 127 MK F L LV L ++AF+ P A +A R + + TYWEGKAPPS VLGP L+K PS LG SL A G+YC HE+NI +T++ D I P YV G+ L PISWGLHVA+WIQK N Sbjct: 1 MKLFAFL--LVVLIGAASAFVSPSAFKGSALAAPRATRATSKVSATPVMLDTYWEGKAPPSEVLGPALAKAPSAGLGVVSLAAFAAGTYCIHETNILHTVSPDNIQPLYVAGALLVPISWGLHVASWIQKQN 130
BLAST of NO09G01140 vs. NCBI_GenBank
Match: XP_005707993.1 (hypothetical protein Gasu_14300 [Galdieria sulphuraria] >EME31473.1 hypothetical protein Gasu_14300 [Galdieria sulphuraria]) HSP 1 Score: 99.8 bits (247), Expect = 6.800e-18 Identity = 48/86 (55.81%), Postives = 59/86 (68.60%), Query Frame = 0 Query: 41 MMEESTYWEGKAPPSVVLGPFLSKIPSGVLGPASLVALIVGSYCTHESNIFNTLTVDTIYPAYVLGSFLTPISWGLHVAAWIQKMN 127 ++ + T+W GK PPS VLG K+PS +S+V L+VGSYC +ESN+ + LTV TI P YVLGS L P SWGLHVA WIQ N Sbjct: 47 VVAKDTFWTGKVPPSTVLG-IGEKVPSAAYIISSVVCLLVGSYCVYESNLLSPLTVTTINPLYVLGSLLVPYSWGLHVAGWIQLKN 131
BLAST of NO09G01140 vs. NCBI_GenBank
Match: OSX74017.1 (hypothetical protein BU14_0313s0002 [Porphyra umbilicalis]) HSP 1 Score: 95.1 bits (235), Expect = 1.700e-16 Identity = 51/105 (48.57%), Postives = 69/105 (65.71%), Query Frame = 0 Query: 24 APVHTARPVV--ARGRTMKMMEESTYWEGKAPPSVVLGPFLSKIPSGVLGPASLVALIVGSYCTHESNIFNTLTVDTIYPAYVLGSFLTPISWGLHVAAWIQKMN 127 A + +R V A R+++M TYWEGKAPPS VLG +PSG+ AS+++L +GSY ++SN+ + LT T+ Y+L S L PISWGLHVA+WIQK N Sbjct: 32 AAIRPSRATVTPAGARSLRM---DTYWEGKAPPSTVLG-LGKNVPSGLYLLASVLSLALGSYGVYKSNLASPLTPSTVEAQYILASLLAPISWGLHVASWIQKQN 132
BLAST of NO09G01140 vs. NCBI_GenBank
Match: GAX20572.1 (hypothetical protein FisN_3Hh578 [Fistulifera solaris]) HSP 1 Score: 87.4 bits (215), Expect = 3.500e-14 Identity = 56/132 (42.42%), Postives = 74/132 (56.06%), Query Frame = 0 Query: 3 TFCILLALVALFNFSNAFMPKAPVHTARPVVARGRTMKM-MEESTYWEGKAPPSVVLGPFLSKIPSGVLGPASLVALIVGSYCTHESNI-------FNTLTVDTIYPAYVLGSFLTPISWGLHVAAWIQKMN 127 +F I+ +VA+ S AF+P + V T + M M E YWEG+ PPS VLGP +SK+PSGVLG SL L +Y +S++ F T Y YVLGSF P++WG HVA+WIQ+ N Sbjct: 5 SFVIVSLVVAM---SQAFVPASQVRTPATAFVNSSPLVMNMAEDMYWEGEYPPSKVLGPIMSKMPSGVLGVLSLFFLGACAYSVGQSSVLVQEPGAFENGTWVKWY--YVLGSFGGPLAWGTHVASWIQRKN 131
BLAST of NO09G01140 vs. NCBI_GenBank
Match: GAX10366.1 (hypothetical protein FisN_3Lh578 [Fistulifera solaris]) HSP 1 Score: 84.7 bits (208), Expect = 2.200e-13 Identity = 55/133 (41.35%), Postives = 73/133 (54.89%), Query Frame = 0 Query: 3 TFCILLALVALFNFSNAFMPKAPVHTARPVVARGRT--MKMMEESTYWEGKAPPSVVLGPFLSKIPSGVLGPASLVALIVGSYCTHESNI-------FNTLTVDTIYPAYVLGSFLTPISWGLHVAAWIQKMN 127 +F I +VA+ S AF+P + V T + + M E YWEG+ PPS VLGP +SK+PSGVLG SL L +Y +S++ F T Y YVLGSF P++WG HVA+WIQ+ N Sbjct: 5 SFVIASLVVAM---SQAFVPASQVRTPAAAFVNNNSPLVMNMAEDMYWEGEYPPSKVLGPIMSKMPSGVLGVLSLFFLGACAYSVGQSSVLVQEPGAFENGTWVKWY--YVLGSFGGPLAWGTHVASWIQRKN 132
BLAST of NO09G01140 vs. NCBI_GenBank
Match: XP_002177048.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >EEC51511.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 82.4 bits (202), Expect = 1.100e-12 Identity = 52/128 (40.62%), Postives = 73/128 (57.03%), Query Frame = 0 Query: 3 TFCILLALVALFNFSNAFMPKAPVHTARPVVARGRT--MKMMEESTYWEGKAPPSVVLGPFLSKIPSGVLGPASLVALIVGSYCTHESNIFNTL-----TVDTIYPAYVLGSFLTPISWGLHVAAWIQ 124 +F ++ +VA+ + AF+P + + T VA+ + M E TYWEG+ PPS VLGP +SK+PSG+LG SLV L +Y SN+ + + YV GSF P++WG HVAAWIQ Sbjct: 5 SFFVVALVVAM---AQAFVPASQIRTPATFVAKETSAFALNMAEDTYWEGEYPPSKVLGPIMSKMPSGLLGMLSLVFLGGCAYSIAMSNVLVQVPGAVENGSWVKWYYVAGSFGGPLAWGTHVAAWIQ 129
BLAST of NO09G01140 vs. NCBI_GenBank
Match: XP_005827597.1 (hypothetical protein GUITHDRAFT_96294 [Guillardia theta CCMP2712] >EKX40617.1 hypothetical protein GUITHDRAFT_96294 [Guillardia theta CCMP2712]) HSP 1 Score: 80.5 bits (197), Expect = 4.200e-12 Identity = 54/130 (41.54%), Postives = 67/130 (51.54%), Query Frame = 0 Query: 5 CILLALVALFNFSNAFMPKAPVHTARPVVARGRTMKMME--------ESTYWEGKAPPSVVLGPFLSKIPSGVLGPASLVALIVGSYCTHESNIFNTLTVDTIYPAYVLGSFLTPISWGLHVAAWIQKMN 127 C+LLALVA + +A P P+ + RT+ + TYWE KAP S VLG +PSG AS+VA +VG +CT + LT D P Y+ GS P SW LHVAAWIQK N Sbjct: 7 CLLLALVASASAFSA--PTLPLRASGRAAVSQRTVMSYSPVPSPEGTKETYWETKAPSSEVLG-IGKNLPSGSFASASVVAALVGGFCTSQC---VPLTADP-NPLYIAGSLFLPYSWALHVAAWIQKNN 129
BLAST of NO09G01140 vs. NCBI_GenBank
Match: EJK75236.1 (hypothetical protein THAOC_03046 [Thalassiosira oceanica]) HSP 1 Score: 80.1 bits (196), Expect = 5.500e-12 Identity = 48/134 (35.82%), Postives = 70/134 (52.24%), Query Frame = 0 Query: 3 TFCILLALVALFNFSNAFMPKAPVH-----TARPVVARGRTMKMMEESTYWEGKAPPSVVLGPFLSKIPSGVLGPASLVALIVGSYCTHESNIFNTL-----TVDTIYPAYVLGSFLTPISWGLHVAAWIQKMN 127 T +L A+VAL S AF+P + +A P + ++ E WEG+ PPS VLGP +SK PSG L S++ L +Y +S I + + + + P Y+LG P +WG HVA+WIQ+ N Sbjct: 5 TLFLLAAIVAL---SQAFVPASQTSRVNQVSAAPRIETQSPTQLFAEDMTWEGEYPPSKVLGPIMSKAPSGTLAILSMMCLAACAYSCVQSGILLRVPGAVESGEWVKPEYILGGMAGPFAWGFHVASWIQRKN 135
BLAST of NO09G01140 vs. NCBI_GenBank
Match: OEU06373.1 (hypothetical protein FRACYDRAFT_214349 [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 79.7 bits (195), Expect = 7.200e-12 Identity = 60/144 (41.67%), Postives = 76/144 (52.78%), Query Frame = 0 Query: 3 TFCILLALVALFNFSNAFMPKAPVHTARPVVARGRT-------------MKMMEESTYWEGKAPPSVVLGPFLSKIPSGVLGPAS------LVALIVGSYCTH-ESNIFNTLTVDTIYPAYVLGSFLTPISWGLHVAAWIQKMN 127 +F IL +VA +AF AP+ T VV R +T ++ + TYWEG+ PPS VLGP +SK+PSG+LG S LVA I GS E F + Y YVLGSF P++WG HVAAWIQ+ N Sbjct: 5 SFVILSIVVAA---CSAF---APIATVNSVVTREQTFATTTPFFTALNAVEDYDSETYWEGEYPPSKVLGPIMSKMPSGMLGALSLVFLGALVASISGSAALQTEPGAFENGSWVKWY--YVLGSFGGPLAWGTHVAAWIQRKN 140
BLAST of NO09G01140 vs. NCBI_GenBank
Match: XP_002286359.1 (predicted protein [Thalassiosira pseudonana CCMP1335] >EED96000.1 predicted protein [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 72.4 bits (176), Expect = 1.200e-9 Identity = 50/135 (37.04%), Postives = 67/135 (49.63%), Query Frame = 0 Query: 7 LLALVALFNFSNAFMPKAPVHT-------ARPVVARGRTMKMMEESTYWEGKAPPSVVLGPFLSKIPSGVLGPASLVALIVGSYCTHESN--------IFNTLTVDTIYPAYVLGSFLTPISWGLHVAAWIQKMN 127 L+ L A+ S+AF+P A T A + A T M E WEG+ PPS VLGP +SK+PSG+L S+ +L V Y ++ I N V Y LG P++WG HVA+WIQ+ N Sbjct: 6 LILLAAIVAISSAFVPAAQTATRVNQMTFAPKIEATESTALFMAEDMTWEGEYPPSKVLGPIMSKMPSGLLAIISMASLGVCVYSCVQTGFLLREPGAIENGSWVRWYYVVEGLGG---PLAWGTHVASWIQRKN 137 The following BLAST results are available for this feature:
BLAST of NO09G01140 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 11
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO09G01140 ID=NO09G01140|Name=NO09G01140|organism=Nannochloropsis oceanica|type=gene|length=1443bpback to top protein sequence of NO09G01140.1 >NO09G01140.1-protein ID=NO09G01140.1-protein|Name=NO09G01140.1|organism=Nannochloropsis oceanica|type=polypeptide|length=129bpback to top Synonyms
Publications
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