NO09G01080, NO09G01080 (gene) Nannochloropsis oceanica

Overview
NameNO09G01080
Unique NameNO09G01080
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length3686
Alignment locationchr9:355787..359472 +

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr9genomechr9:355787..359472 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO09G01080 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL119nonsL119Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR021ncniR021Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR127ngnoR127Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO09G01080.1NO09G01080.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO09G01080.1NO09G01080.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO09G01080 ID=NO09G01080|Name=NO09G01080|organism=Nannochloropsis oceanica|type=gene|length=3686bp
GCTGCTGCTGTCAGAATCGCTGCTGCTGTCAGAATCGCTGCTGCTGTCAC
TATTCGACGAGTGAGAGGAAGAAGGAGAGGAAGAAGACGAGGAAGAGGGT
GAAGGAGACCGACGCCGCTTCTTCCCTCCACTTATCTTCCTCTTACTGCC
GCTAGACGCCTTTTTGCTTTTGCTCTTACTTTTCTTGGATTTGTTCTCCT
CCGCCTGCATTTTACCCTCCTTTTGTTCCTTGGTCTCGTACCCGGGAGGC
ACATCCAGGGAGAAGGAAGGTTTCAGGCCTGGGTTTTCTAAGATAGCAGT
CCTACTCTCTCGCTTCTGGTAGGGCCGAGCTTTCGCCTTGCATTCGTATG
TCCAGTGTCCTGGGTGATTACACTTCTGGCACATAGCGCTCTTTTTATCC
TCTCGCATGCGTTGGTAAGGACCCTTGCGAAGGTCAGTCACGACCGTCCT
CCGTCCCCCGCCCAAGAGGTGGGAAGACATGGGAACTGGCGGGAAGATGA
TTGTTGCGGTTGGCTGCTTCCTCTTGCTCCTCCGTGCGCTCTCCAACAAG
CTTGGAATCGCCGTGCCTGAGTTGGGTGTGCAAGCTTGGAGTGAGTTGTT
GCCCGGGAGATGCGGGGTAGAGTCTCAGCACACAAAGAGAGTATCAACGA
CCAAGAAGACAGCAATTTTCGACTACTGATGACTGGCGGGCGAACTTGAA
GCCCTACCGAGCGGGCCCCAGCCCACCACCAAAAAATGACCACCACATCA
CGGTCGAGTGACGACAGGTGATACCAAAGCCCACCACTCGTAGACATTCC
ATCGGTCATTCCAGTGCGGGTAGGCTCGGAAACCCACAAAAAgtaagtct
gaaggatgaaatagaaaaaaacaactcaagcacgacttcacttcaccaca
tttatcgcatcttttaagTCTCTACACAGTGTCACAGAGTGTCCAGGTCC
CCTGCCGCCTTAGCCTCGGGCACCCACGAGGCTCCTTTCACGTAGATCTC
CTCAATCTCGCTCCCCACCAAGAAACGAGCCATATCAAAATCGTGGCTGC
TCATGTCCAAAAAGATGCCGCCGCTTGTCTTGAGGTACTCAGCAGGGGGT
GGGGCCTGATCCCGACTTACGATGCGGAAAGTCCGCATTTCGCCAATTGC
GCCTTGCGTGATCTGCTTCTTGACATTTTGAAAGTTGATGTCGAAGCGAC
GTTGGAAGCCGAGGATGAGCTTGGTGCCCGCCTTAGCCGCAGCTTGAGTG
CAGGCGTCAATAGCAGAGAGATCGTTCGAGATCGGTTTCTCACAGAAGTC
GTGTTTGCCACGCTCGACGGCCGACATGATTTGCTCCACGTGGCAGGGCG
TGGGTGAAGCCACCACCACGGCATGCACATCGTCGCGGTCAAGCAGCTCG
AAGTAGTCCTTGTGGTAGGTGGGCATGCCACCCGTTTGTCCTATTAACTT
CTTACCCATCTCCTCGAAGGGGTCCGTAATGGCCACAAGCCGCGCGCCTG
GCGTGTGGAAAGCGAGGGTATTGCCGTGTATCTGTCCGATGCGCCCGCAG
CCAACGACGCCTACTCCCAACGGTGTTCGGGACATGCGGAGAAAGAAGCC
CCAAGTTAGGACCGGGAAATGGAAGGCGAGACTTAGAAGGACGACGACGG
CCTGCTTGAAGGCCATGCTTCGATTCGAGTGTGACCGATGTAATACGGAT
CATACTGGTGGCACTTGCTGAAGCACGACCCCGGGCAGCTGCAGGAGGAG
GAGGAGGAGGGGGGAGGGATAGCAGGATGGATACAGGAGGGGATCCTGGA
AGGGTAGGAGTGGGAGGAGTCGGGGCGGCCGGAGCGGCAACAGGAGGAGG
AGGAGAGGGAACGAGGGGAATCTCCACTATACTCTCTTTACCCGGAGAAC
AGGCAGCACGAGCACTAGAAACCATTGGTAGAATTCGTGCGGCACTTACT
GGAGGAATGGAGAAGGGAAAGAGAAAGATAGTGAGGCCGCTCCGACCAGG
GGGAAGAGGGGGAGGAGAAGGAGGAGGAGGGGGAGAAGGAGGGAGAGGGG
GAGGAGGGAGAGGGGGAGGAGGAGGAGGAGGAGGAGGGGGAGGGGGAGGA
GGAGGAGGAGGGGGAGGAGGAGGAGGGGGAGGAGGAGGAGGGGGAGGAGG
AGGAGGACGAGAAGGAGGGGGAGAAGGAGGAGGGGGAGGAGGAGGAGGAC
GAGAAGGAGGAGGCGGTGGAAGACGGGAAGAAGAAGGTAGAGGAGGAGGA
GGGGAAGGAGGGAAAGGAGGAGGGGAAGGCAAGAAAGCTGGGGGTGGGAC
GGAAgtgggagggaggggatatgtgggagccagtgcaacatcagcaccag
cacccacaccggcagtgggaggaggggaaggaggaggggaggaagaagag
ggaaaagaacccgggctgcggaagcagcagcagccgccgggatgcagctg
accatactggtggcacttgctgaagcacgaccccgggcagctgcaggagg
aggaggaggaggagggagggatagcaggatggatacaggaggggatcctg
gaagggtagGAGTGGGAGGAGTCGGGGCGGCCGGAGCGGCAACAGGAGGA
GGAGGAGAGGGAACGAGGGGAAGGAGGAGGAGGAGGAGGAGGAGGGGGAG
GAGGACGAGAAGGAGGAGGAGGAGGAGGAGGAGGAGGAGAAGAAGGAGGG
GGAGAAGGAGGAGGAGAAGAAGGAGGAGGGGGCGAGGAGGACGACGAGGA
GGAGGAGGACGAGAAGGAGGAGGCGGTGGAAGACGGGAAGAAGAAGgtgg
aggatgaggaggagaagaagaagaagaagaagaggaggacgagaaggagg
aggcggtggaagacgggaagaagaagGTGGAGGAGGAGGAGGAGAAGAAG
AAGGAGAGGAGAAAGAGGAGGAAGAAGAATGGGGAGGAGGAGGAGGGGGA
GGAGGAGGGAGAGGAGGAGGGAGACGAGGAGGGGGTGGAAGGGGAAGGGG
CGGAGGAGGCGGAGGCGGTGGAAGCAGAGGACGGGGGGGGGAAGGCGGAG
GAGGCGGAGGCGGTGGAAGCAGAGGAGGAGGAGGGGAAGGTGGAGGAGGC
GGAGGAGGCGGAGGCGGAGGAGGCGGAGGAGGAGGGGGCGGAGGCGGTGG
AATTAGAGGGGAAGGAGGCGGAGGAGAACGAGGCGGAGGCGGAGGAGGAC
GAGGACGAGGCAGAGGAGGAGGTCATGGGCGGGCCATCCGAGGACTGTAT
TGGTGTGACACCTGTGAACAGTTCGTGTCCCGGGACGGCAGTAGGGCACG
TAACATCCTGCGGGTGTACAGGAGTATGGTCCATGGAGAAGCTCGTCCCC
ATGATCTTCGGTTTGGTCAACCACGGCAAGATATGCGGACACTCTATGTG
TAGCGTTCCCGCTGACCTCCTCTTTTCTCCTCCTTCCCCTTCTCCTCCTG
GCCCTGTGTGGGCCGTCCGGGGACTTTGCCAGGTCAAAAAACCTGTCAAA
GTCGCCAGAAAAACTCGGACGAGAAATAAGGGATGACACAAATTTATTGT
TGGAAGGCTCCCCCTCGTATGCAAGTCCTCGAAGACGTCAGGTTGCATGC
GATAGTTCTAGAGAGATGTAGGAACGCAACTCAAAAGAGCAAAAGAACTA
TTCAGCATTGATAATAATAAATAATAATACATAATA
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protein sequence of NO09G01080.1

>NO09G01080.1-protein ID=NO09G01080.1-protein|Name=NO09G01080.1|organism=Nannochloropsis oceanica|type=polypeptide|length=475bp
MDTGGDPGRVGVGGVGAAGAATGGGGEGTRGISTILSLPGEQAARALETI
GRIRAALTGGMEKGKRKIVRPLRPGGRGGGEGGGGGEGGRGGGGRGGGGG
GGGGGGGGGGGGGGGGGGGGGGGGGGGREGGGEGGGGGGGGREGGGGGRR
EEEGRGGGGEGGKGGGEGKKAGGGTEEWEESGRPERQQEEEERERGEGGG
GGGGGGGGREGGGGGGGGGEEGGGEGGGEEGGGGEEDDEEEEDEKEEAVE
DGKKKVEEEEEKKKERRKRRKKNGEEEEGEEEGEEEGDEEGVEGEGAEEA
EAVEAEDGGGKAEEAEAVEAEEEEGKVEEAEEAEAEEAEEEGAEAVELEG
KEAEENEAEAEEDEDEAEEEVMGGPSEDCIGVTPVNSSCPGTAVGHVTSC
GCTGVWSMEKLVPMIFGLVNHGKICGHSMCSVPADLLFSPPSPSPPGPVW
AVRGLCQVKKPVKVARKTRTRNKG*
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Synonyms
Publications