NO09G00710, NO09G00710 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO09G00710 vs. NCBI_GenBank
Match: EWM27710.1 (60s ribosomal protein l18a [Nannochloropsis gaditana]) HSP 1 Score: 285.4 bits (729), Expect = 1.200e-73 Identity = 136/145 (93.79%), Postives = 141/145 (97.24%), Query Frame = 0 Query: 1 MVQSRLRQYQVVGRHVPTEAHPNPTVFRMKIFAPNEVVAKSRFWYFLHQMHKMKKTTGEILDVNELVERNARIVKNYAIWLKYDSRSGTHNMYREYRDLTLTGAVDQLYSEMAGRHRARFRSIQIIRTGVVTAKDAKRTHTMQYH 146 MVQ+RLRQYQVVGRHVPTEA PNPTVFRMKIFAPNEVVAKSRFWYFLHQMHKMKKTTGEILD+NELVERN+RI+KNYAIWLKYDSRSGTHNMYREYRDLTLTGAVDQLY+EMAGRHRARFRSIQIIRTGVV AKD KR HTMQYH Sbjct: 16 MVQARLRQYQVVGRHVPTEAQPNPTVFRMKIFAPNEVVAKSRFWYFLHQMHKMKKTTGEILDINELVERNSRIIKNYAIWLKYDSRSGTHNMYREYRDLTLTGAVDQLYAEMAGRHRARFRSIQIIRTGVVDAKDVKRAHTMQYH 160
BLAST of NO09G00710 vs. NCBI_GenBank
Match: GAY02041.1 (60S ribosomal protein L18a [Pythium insidiosum] >GAY02046.1 60S ribosomal protein L18a [Pythium insidiosum]) HSP 1 Score: 266.5 bits (680), Expect = 5.800e-68 Identity = 125/173 (72.25%), Postives = 146/173 (84.39%), Query Frame = 0 Query: 5 RLRQYQVVGRHVPTEAHPNPTVFRMKIFAPNEVVAKSRFWYFLHQMHKMKKTTGEILDVNELVERNARIVKNYAIWLKYDSRSGTHNMYREYRDLTLTGAVDQLYSEMAGRHRARFRSIQIIRTGVVTAKDAKRTHTMQYHNSKIKFPLPHRIQRPPTKSLRGVYKAVRPNTY 178 ++R +QVVGR PT+ PNP +RMK+FAPN V+AKSRFWYFLHQM KMKKTTGEILDVNELVE+N RIVKNY IW++Y+SRSGTHNMY+EYRDLTL GAVDQLYSE+AGRHRAR RSIQI+RT VV AKD K+ + Q+H+SKIKFPL HRI RP K+ R V+KA RP T+ Sbjct: 199 QIRHFQVVGRKAPTDKEPNPPAYRMKLFAPNAVIAKSRFWYFLHQMKKMKKTTGEILDVNELVEKNKRIVKNYGIWIRYNSRSGTHNMYKEYRDLTLCGAVDQLYSELAGRHRARPRSIQIMRTAVVAAKDTKKANVQQFHDSKIKFPLSHRIPRPSIKNHRTVFKASRPTTF 371
BLAST of NO09G00710 vs. NCBI_GenBank
Match: XP_008880083.1 (hypothetical protein H310_14105 [Aphanomyces invadans] >ETV91246.1 hypothetical protein H310_14105 [Aphanomyces invadans]) HSP 1 Score: 264.6 bits (675), Expect = 2.200e-67 Identity = 120/172 (69.77%), Postives = 145/172 (84.30%), Query Frame = 0 Query: 6 LRQYQVVGRHVPTEAHPNPTVFRMKIFAPNEVVAKSRFWYFLHQMHKMKKTTGEILDVNELVERNARIVKNYAIWLKYDSRSGTHNMYREYRDLTLTGAVDQLYSEMAGRHRARFRSIQIIRTGVVTAKDAKRTHTMQYHNSKIKFPLPHRIQRPPTKSLRGVYKAVRPNTY 178 + YQVVGR PTE PNP FRMK+FAPNEV+AKSRFWYFLHQM KMKKTTGEIL +NEL E+N RIVKNY +W++Y+SRSGTHNMY+EYRD+TL GA++QLY+E+AGRHRAR RSIQI+RT ++ AKD K+ +T+QYH+SKIKFPL HR+ RP K R VYKA RP+T+ Sbjct: 4 IHHYQVVGRKAPTETDPNPPAFRMKLFAPNEVLAKSRFWYFLHQMKKMKKTTGEILSINELREKNKRIVKNYGVWIRYNSRSGTHNMYKEYRDVTLNGAIEQLYAELAGRHRARPRSIQIMRTAILAAKDCKKPNTLQYHDSKIKFPLSHRVPRPSLKKFRTVYKANRPSTF 175
BLAST of NO09G00710 vs. NCBI_GenBank
Match: CBN79653.1 (ribosomal protein L18 [Ectocarpus siliculosus]) HSP 1 Score: 264.2 bits (674), Expect = 2.900e-67 Identity = 123/172 (71.51%), Postives = 139/172 (80.81%), Query Frame = 0 Query: 6 LRQYQVVGRHVPTEAHPNPTVFRMKIFAPNEVVAKSRFWYFLHQMHKMKKTTGEILDVNELVERNARIVKNYAIWLKYDSRSGTHNMYREYRDLTLTGAVDQLYSEMAGRHRARFRSIQIIRTGVVTAKDAKRTHTMQYHNSKIKFPLPHRIQRPPTKSLRGVYKAVRPNTY 178 +RQYQVVGR TE PNP V+RMK+FAPNEV S+FWY +HQM KMKKTTGEILD+ EL E+NARI+KNY IWL+YDSRSGTHNMYREYRDLTLTGAVDQ+YSEMAGRHR R RSIQIIRTG+V AKD KR Q+HN+ IKFPL HR+ R P K R +KA RP T+ Sbjct: 65 MRQYQVVGRKAVTEKEPNPPVYRMKVFAPNEVTGASQFWYLMHQMRKMKKTTGEILDIVELTEKNARIIKNYGIWLRYDSRSGTHNMYREYRDLTLTGAVDQMYSEMAGRHRCRPRSIQIIRTGIVAAKDTKRPDVQQFHNANIKFPLTHRLPRAPKKKFRTTFKASRPTTF 236
BLAST of NO09G00710 vs. NCBI_GenBank
Match: OQR91948.1 (60S ribosomal protein L18a [Achlya hypogyna]) HSP 1 Score: 261.9 bits (668), Expect = 1.400e-66 Identity = 120/172 (69.77%), Postives = 145/172 (84.30%), Query Frame = 0 Query: 6 LRQYQVVGRHVPTEAHPNPTVFRMKIFAPNEVVAKSRFWYFLHQMHKMKKTTGEILDVNELVERNARIVKNYAIWLKYDSRSGTHNMYREYRDLTLTGAVDQLYSEMAGRHRARFRSIQIIRTGVVTAKDAKRTHTMQYHNSKIKFPLPHRIQRPPTKSLRGVYKAVRPNTY 178 + QYQVVGR PTE PNP FRMK+FAPNEV+AKSRFWYFLHQM KMKKTTGEIL +NEL E+N RIVKNY IW++Y+SRSGTHNMY+EYR +TL GAV+Q+Y+E+AGRHRAR RSIQI+RT ++ AKD K+ +T+QYH+S IKFPL HR+ RP TK+ R V+KA RP T+ Sbjct: 4 IHQYQVVGRKAPTETDPNPPAFRMKLFAPNEVLAKSRFWYFLHQMKKMKKTTGEILQINELREKNKRIVKNYGIWIRYNSRSGTHNMYKEYRGVTLCGAVEQMYAELAGRHRARPRSIQIMRTAILAAKDCKKPNTLQYHDSNIKFPLSHRVPRPATKNQRTVFKASRPTTF 175
BLAST of NO09G00710 vs. NCBI_GenBank
Match: XP_008604133.1 (50S ribosomal protein L18Ae [Saprolegnia diclina VS20] >EQC42710.1 50S ribosomal protein L18Ae [Saprolegnia diclina VS20]) HSP 1 Score: 260.4 bits (664), Expect = 4.200e-66 Identity = 119/172 (69.19%), Postives = 146/172 (84.88%), Query Frame = 0 Query: 6 LRQYQVVGRHVPTEAHPNPTVFRMKIFAPNEVVAKSRFWYFLHQMHKMKKTTGEILDVNELVERNARIVKNYAIWLKYDSRSGTHNMYREYRDLTLTGAVDQLYSEMAGRHRARFRSIQIIRTGVVTAKDAKRTHTMQYHNSKIKFPLPHRIQRPPTKSLRGVYKAVRPNTY 178 + QYQVVGR PTE+ PNP FRMK+FAPNEV+AKSRFWYFLHQM KMKKTTGEIL +NEL E+N RIVKNY +W++Y+SRSGTHNMY+EYRD+TL GAV+Q+Y+E+AGRHRAR RSIQI+RT ++ AKD K+ +T+QYH+S IKFPL HR+ RP K+ R V+KA RP T+ Sbjct: 4 IHQYQVVGRKAPTESDPNPPAFRMKLFAPNEVLAKSRFWYFLHQMKKMKKTTGEILCLNELREKNKRIVKNYGVWIRYNSRSGTHNMYKEYRDVTLCGAVEQMYAELAGRHRARPRSIQIMRTAILAAKDCKKPNTLQYHDSAIKFPLSHRVPRPANKNQRTVFKASRPTTF 175
BLAST of NO09G00710 vs. NCBI_GenBank
Match: XP_009831602.1 (hypothetical protein H257_07690 [Aphanomyces astaci] >ETV78883.1 hypothetical protein H257_07690 [Aphanomyces astaci]) HSP 1 Score: 260.4 bits (664), Expect = 4.200e-66 Identity = 118/172 (68.60%), Postives = 143/172 (83.14%), Query Frame = 0 Query: 6 LRQYQVVGRHVPTEAHPNPTVFRMKIFAPNEVVAKSRFWYFLHQMHKMKKTTGEILDVNELVERNARIVKNYAIWLKYDSRSGTHNMYREYRDLTLTGAVDQLYSEMAGRHRARFRSIQIIRTGVVTAKDAKRTHTMQYHNSKIKFPLPHRIQRPPTKSLRGVYKAVRPNTY 178 + YQVVGR PTE PNP FRMK+FAPNEV+AKSRFWYFLHQM KMKKTTGEIL VNEL E+N RIVKNY +W++Y+SRSGTHNMY+EYRD+TL A++QLY+E+AGRHRAR RSIQI+RT ++ AKD K+ +T+QYHNS IKFPL HR+ RP K R ++KA RP+T+ Sbjct: 4 IHHYQVVGRKAPTETDPNPPAFRMKLFAPNEVLAKSRFWYFLHQMKKMKKTTGEILSVNELREKNKRIVKNYGVWIRYNSRSGTHNMYKEYRDVTLNSAIEQLYAELAGRHRARPRSIQIMRTAILAAKDCKKPNTLQYHNSAIKFPLSHRVPRPSLKKFRTIFKANRPSTF 175
BLAST of NO09G00710 vs. NCBI_GenBank
Match: OQS02440.1 (translation initiation factor eIF-2B subunit epsilon [Thraustotheca clavata]) HSP 1 Score: 252.3 bits (643), Expect = 1.100e-63 Identity = 115/161 (71.43%), Postives = 139/161 (86.34%), Query Frame = 0 Query: 6 LRQYQVVGRHVPTEAHPNPTVFRMKIFAPNEVVAKSRFWYFLHQMHKMKKTTGEILDVNELVERNARIVKNYAIWLKYDSRSGTHNMYREYRDLTLTGAVDQLYSEMAGRHRARFRSIQIIRTGVVTAKDAKRTHTMQYHNSKIKFPLPHRIQRPPTKSLR 167 + QYQVVGR PTE PNP FRMK+FAPNEV+AKSRFWYFLHQM KMKKTTGEIL +NEL E+N RIVKNY +W++Y+SRSGTHNMY+EYRD+TL GA++Q+Y+E+AGRHRAR RSIQI+RT ++ AKD K+ +T+QYH+SKIKFPL HR+ RP TKS R Sbjct: 4 IHQYQVVGRKAPTETDPNPPAFRMKLFAPNEVLAKSRFWYFLHQMKKMKKTTGEILCLNELREKNKRIVKNYGVWIRYNSRSGTHNMYKEYRDVTLCGAIEQMYAELAGRHRARPRSIQIMRTSILAAKDCKKPNTLQYHDSKIKFPLSHRVPRPATKSQR 164
BLAST of NO09G00710 vs. NCBI_GenBank
Match: CCA22335.1 (60S ribosomal protein L18a putative [Albugo laibachii Nc14]) HSP 1 Score: 248.8 bits (634), Expect = 1.300e-62 Identity = 116/174 (66.67%), Postives = 144/174 (82.76%), Query Frame = 0 Query: 6 LRQYQVVGRHVPTEAHPNPTVFRMKIFAPNEVVAKSRFWYFLHQMHKMKKTTGEILDVNELVERNARIVKNYAIWLKYDSRSGTHNMYREYRDLTLTGAVDQLYSEMAGRHRARFRSIQIIRTGVVTAKDAKRTHTMQYHNSKIKFPLPHRIQRP-----PTKSLRGVYKAVRP 175 +RQYQV GR PTE PNP ++RMK+FAPNEV+AKSRFWYFLHQ+ KMKKTTGEILDVNEL E+N RIVKNY +W++Y+SRSGTHNMY+EYRD+TL GAV Q+YSE+AGRHRAR RSIQI+RT ++ AKD K+ + Q+H+SKIKFPL HRI RP P+K + ++K ++P Sbjct: 3 IRQYQVSGRKAPTEKEPNPPIYRMKLFAPNEVLAKSRFWYFLHQVKKMKKTTGEILDVNELREKNTRIVKNYGVWIRYNSRSGTHNMYKEYRDVTLCGAVQQMYSELAGRHRARPRSIQIMRTAMLAAKDTKKPNIKQFHDSKIKFPLTHRIPRPHMKKFPSKCILRLWKPLKP 176
BLAST of NO09G00710 vs. NCBI_GenBank
Match: XP_002897608.1 (60S ribosomal protein L18a [Phytophthora infestans T30-4] >AAY43426.1 ribosomal protein L18 [Phytophthora infestans] >EEY64878.1 60S ribosomal protein L18a [Phytophthora infestans T30-4]) HSP 1 Score: 248.1 bits (632), Expect = 2.100e-62 Identity = 113/172 (65.70%), Postives = 140/172 (81.40%), Query Frame = 0 Query: 6 LRQYQVVGRHVPTEAHPNPTVFRMKIFAPNEVVAKSRFWYFLHQMHKMKKTTGEILDVNELVERNARIVKNYAIWLKYDSRSGTHNMYREYRDLTLTGAVDQLYSEMAGRHRARFRSIQIIRTGVVTAKDAKRTHTMQYHNSKIKFPLPHRIQRPPTKSLRGVYKAVRPNTY 178 +RQ+QVVGR PTE PNP +RMK+FAPN V+A+SRFWYFLHQM KMKKTTGEILD+NEL E+N R+V NY IW++Y+SRSGTHNMY+EYRDLTL AV+Q+Y+E+AGRHRAR RSIQI+RT +V AKD ++T+ Q+H+SKI FPL HR+ R K V+KA RP T+ Sbjct: 3 IRQFQVVGRKAPTEKEPNPPAYRMKLFAPNPVLAQSRFWYFLHQMKKMKKTTGEILDINELTEKNRRVVNNYGIWIRYNSRSGTHNMYKEYRDLTLCSAVEQMYAELAGRHRARPRSIQIMRTAIVAAKDTQKTNVQQFHDSKIAFPLSHRLPRAAEKHHNSVFKASRPCTF 174 The following BLAST results are available for this feature:
BLAST of NO09G00710 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO09G00710 ID=NO09G00710|Name=NO09G00710|organism=Nannochloropsis oceanica|type=gene|length=3953bpback to top protein sequence of NO09G00710.1 >NO09G00710.1-protein ID=NO09G00710.1-protein|Name=NO09G00710.1|organism=Nannochloropsis oceanica|type=polypeptide|length=180bpback to top Synonyms
Publications
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