NO09G00660, NO09G00660 (gene) Nannochloropsis oceanica

Overview
NameNO09G00660
Unique NameNO09G00660
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2027
Alignment locationchr9:242916..244942 -

Link to JBrowse

Properties
Property NameValue
DescriptionPheophorbide a oxygenase
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr9genomechr9:242916..244942 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
PXD0166992021-01-08
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PXD0087212019-04-30
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0010277chlorophyllide a oxygenase [overall] activity
GO:00515372 iron, 2 sulfur cluster binding
GO:0016491oxidoreductase activity
GO:0003824catalytic activity
Vocabulary: Biological Process
TermDefinition
GO:0055114oxidation-reduction process
Vocabulary: INTERPRO
TermDefinition
IPR036922Rieske_2Fe-2S_sf
IPR013626PaO
IPR017941Rieske_2Fe-2S
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Homology
BLAST of NO09G00660 vs. NCBI_GenBank
Match: EWM27741.1 (pheophorbide a oxygenase [Nannochloropsis gaditana])

HSP 1 Score: 788.1 bits (2034), Expect = 2.000e-224
Identity = 397/608 (65.30%), Postives = 445/608 (73.19%), Query Frame = 0
Query:   10 LMVLGLVLPYTSQAFVGGQLPK-SLFPKQQSRRASTAGTSNLVSATTPTSSSVAFTGSSSNDDVHEAFDWWKQWYPVALTRDLDSAVPTKVTLLGRDLVLWKEGAVAAAASGNPPAWRCFIDRCPHRMAPLSEGRVDSKTGHLQCAYHGWEFGGSGACSKIPQADPDADQSEATARRSRRACATALPSQEAQGMIWVWPDTSDKGLAASKVVKPTLMEDVDEKAMSYLVVCRDMPYGFETLLENGIDPSHLPFAHHNIISNRNQAAFIDIKVDEIRNDGFDSAQFFPKXXXXXXXXXXXXXXXXXXXXXXXXXXXXTVEHGSGNLDQHRIGSLVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPPMVKVAQSLHFRPPTLLYQVINVTEILNKLPLLPKRERLIRIVTYAVPTGPGRSRVIYRFLRNYFLPPLAWLRWPPEWIEHQRILRVLDSDTVFLHGQERERALLDPSTVQDVDKTYYMPTAADGSVRALRKWLARFGTPKWLISGLPSSLPQTPDRRTLLDRYASHTAHCKVCRGALRNLGRLRHGIGFMSVMAFYLGLLGQSVYTRLAGGFLTVLGITGSLIIKGFEERFYFQPWDHGRN 617
            + VL   LP  S+AFVGG + K   F +    + +    +   +A   + +SV     +  ++  +AFDWWKQWYPVALTRD+D AVPTKV LLGRDLVLW+EG  A A  G    WRCF+DRCPHR+APLSEGR+D++TGHLQCAYHGWEF GSG CSKIPQ DP+ DQ  A A RSRRACAT+LP+ EAQGMIWVWPDTS +G+ ASK VKPTLM+DVDEK MSYLVVCRDMPYGF+TLLENGIDPSHLPFAHHNIISNRNQAA+ID +VD+I   GFDS QF+PK                                   + D HR+   +                               PP V+V QSLHFRPPTLLYQVINVT I +K+P LPKRERLIRIVTYAVP  PGRSRVIYRFLRNYFLPP +W+RWPPEWI+HQRILRVLDSDTVFLHGQERERALL PS   DVD+ Y+MPTAADGSVRALRKWLARFG P+WL+  L SSLP TPDRRTLLDRY SHT  CK+CRGALRNL RLR  IGFMSVMAFYLGLLGQSVYTRLAGGF TVLGITGS++IK FEERFYFQPWDHGRN
Sbjct:   20 VFVLYACLPSISRAFVGGTMSKFPTFLQTYCHKFTKISLNMPAAARILSPASVIEAKENGIEEDDDAFDWWKQWYPVALTRDIDGAVPTKVMLLGRDLVLWREGTAADAKKGAVRTWRCFVDRCPHRLAPLSEGRIDTRTGHLQCAYHGWEFSGSGQCSKIPQTDPETDQGGAGALRSRRACATSLPTLEAQGMIWVWPDTSKEGVEASKAVKPTLMKDVDEKEMSYLVVCRDMPYGFDTLLENGIDPSHLPFAHHNIISNRNQAAYIDTQVDKIWKGGFDSNQFYPKRGRKPSLPPISVSEQNSLTK-------------DKHADAHRMADCI------------------NELSERFPDRPIAPPTVRVPQSLHFRPPTLLYQVINVTAIFDKIPFLPKRERLIRIVTYAVPVAPGRSRVIYRFLRNYFLPPFSWMRWPPEWIQHQRILRVLDSDTVFLHGQERERALLSPSAAADVDRCYFMPTAADGSVRALRKWLARFGGPRWLVPDL-SSLPPTPDRRTLLDRYESHTKSCKICRGALRNLKRLRQLIGFMSVMAFYLGLLGQSVYTRLAGGFFTVLGITGSVVIKRFEERFYFQPWDHGRN 595          
BLAST of NO09G00660 vs. NCBI_GenBank
Match: EWM26188.1 (Pheophorbide a oxygenase [Nannochloropsis gaditana])

HSP 1 Score: 309.3 bits (791), Expect = 2.700e-80
Identity = 177/510 (34.71%), Postives = 259/510 (50.78%), Query Frame = 0
Query:   77 DWWKQWYPVALTRDLDSAVPTKVTLLGRDLVLWKEGAVAAAASGNPPAWRCFIDRCPHRMAPLSEGRVDSKTGHLQCAYHGWEFGGSGACSKIPQADPDADQSEATARRSRRACATALPSQEAQGMIWVWPDTSDKGLAASKVVKPTLMEDVDEKA-MSYLVVCRDMPYGFETLLENGIDPSHLPFAHHNIISNRNQAAFIDIKVDEIRNDGFDSAQFFPKXXXXXXXXXXXXXXXXXXXXXXXXXXXXTVEHGSGNLDQHRIGSLVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPPMVKVAQSLHFRPPTLLYQVINVTEILNKLPLLP---KRERLIR-----------IVTYAVPTGPGRSRVIYRFLRNYFLPPLAWLRWPPEWIEHQRILRVLDSDTVFLHGQERERALLDPSTVQDVDKTYYMPTAADGSVRALRKWLARFGT--PKWLISGLPSSL-PQTPDRRTLLDRYASHTAHCKVCRGALRNLGRLRHGIGFMSVM 569
            DWW+QWYP+A   DLD A PT+V LLG+  V+W +         +   W  F D+CPHR+APLSEGR+D + G+LQCAYHGW F G G C  IPQA+P+    +A A RS RACA A+P   AQGM+W+WPD S  G+ AS+   P+ + ++ + A +    V RD+ YG++TL+EN +DP+H+PFAHH + + R+ A  +++ ++ +  +G                                             L   R+ +                                         ++ F  PT L+ + + T    ++PL+    + E+ +R           +VTY +P GPGRSR++  F RN+F          P W++H     VLD D VFLHGQERE    +    +++D+ +YMPT +D  VRA R+WL R+G   P+W   G+ S+L P++ DR  L+DRY  HT  C  CRGALRN+  L+     MS++
Sbjct:  101 DWWRQWYPMAFLDDLDPARPTQVELLGKLFVIWAD---------HDKTWHAFEDQCPHRLAPLSEGRIDER-GNLQCAYHGWSFSGQGGCVNIPQAEPEI---KAVAERSGRACAKAVPLLVAQGMVWLWPDNSPDGMEASRSQLPSTVPELHDPAFIRGAWVTRDLMYGYDTLVENVVDPAHVPFAHHGVQAQRSMAMPLNVSLNYVGKEGV-------------------------------------------FLSLPRLAN----------------------------------------STIEFHAPTRLHYLFDFTGFFQRVPLMKWAFRLEKWLRRLPPDTRPRSSLVTYTIPVGPGRSRILALFPRNFFAIN------KPRWLDHLERNAVLDGDLVFLHGQEREMRRPELKWEENIDRAFYMPTKSDEGVRAFRQWLVRWGAGGPRW-ADGVDSALPPRSNDRHFLMDRYTQHTTQCSACRGALRNIRVLKGVTAAMSLV 507          
BLAST of NO09G00660 vs. NCBI_GenBank
Match: GAQ92150.1 (Pheophorbide a oxygenase [Klebsormidium nitens])

HSP 1 Score: 271.6 bits (693), Expect = 6.200e-69
Identity = 190/586 (32.42%), Postives = 272/586 (46.42%), Query Frame = 0
Query:   40 RRASTAGTSNLVSATTPTSSSVAFTGSSSNDDVHEAFDWWKQWYPVALTRDLDSAVPTKVTLLGRDLVLWKEGAVAAAASGNPPAWRCFIDRCPHRMAPLSEGRVDSKTGHLQCAYHGWEFGGSGACSKIPQADPDADQSEATARRSRRACATALPSQEAQGMIWVWPDTSDKGLAASKVVKP-TLMEDVDEKAMSYLVVCRDMPYGFETLLENGIDPSHLPFAHHNIISNRNQAAFIDIKVDEIRNDGFDSAQFFPKXXXXXXXXXXXXXXXXXXXXXXXXXXXXTVEHGSGNLDQHRIGSLVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPPMVKVAQSLHFRPPTLLYQVINVTEILNKLPLLPKRERLIRIVTYAVPTGPGRSRVIYRFLRNYF---LPPLAWLRWPPEWIEHQRILRVLDSDTVFLHGQERERALLDPSTVQDVDKTYYMPTAADGSVRALRKWLARF--GTPKWLISGLPSSLPQTPD----RRTLLDRYASHTAHCKVCRGALRNLGRLRHGIGFMSVMAFYLGLLGQSVYTRLA--GGFLTVLGITGSLIIKGFEERFYFQPWDH 614
            RR    G++ +  A   T  S          + +E F+W +QWYPV+L  DLD + PT + LLGR LVLWK+         +   W C  D+CPHR+APLSEGR+D ++G LQC+YHGW F G G C+ IPQA   +   EA A R+ RACA ALP++E QG++WVWPDT++    AS   +P +L     + A + + + RD+PY ++TL EN  DPSH+ FAHH +   R++A  ++++V+E   +GF                                      + G+ N                                          P  K      F PP L    I +        +       I I +Y +P+ PG+SR I    RN+F    P   W +  P W EH    +V D D + L GQE+    L   + +D  +  Y PT+AD  V A RKWL +   G P++     P  +P  P+    RR +LDR   HT  C  CRGAL  L RLR+G+   + ++  L  +  ++  RLA   G L  LG+   +  K  E+ F F+ + H
Sbjct:   93 RREERKGSAGICHAAA-TLESPRIASDEDRQEHNELFNWKQQWYPVSLLEDLDPSAPTPIQLLGRPLVLWKD---------SKGKWICLEDKCPHRLAPLSEGRID-ESGFLQCSYHGWSFDGDGKCAVIPQA--ASSGPEAAANRNSRACAVALPTREFQGLLWVWPDTANP--EASFFKEPASLPPAFSDPAYATVGIQRDLPYAYDTLTENVADPSHIDFAHHKVTGRRDRARPLNLRVEEASMNGF--------------------------------------KGGTQN-----------------------------------------DPPGKPRFFSEFHPPCLFVNRIEIPAPFKPPVIGGPDVWEIYIASYNIPSAPGKSRSIVISARNFFQFLSPGGNWWQPVPRWYEHITSNKVYDGDMLVLQGQEK---YLSGISAKDYGRVTYTPTSADRLVLAFRKWLHKHGGGGPEF-----PEGVPLEPNVERSRREMLDRLHQHTEVCSSCRGALTGLKRLRYGLMASAALSLLLSSVAGTLPLRLAFTTGSLLALGMAAFVYFK-LEQEFIFRDYVH 575          
BLAST of NO09G00660 vs. NCBI_GenBank
Match: XP_008462467.1 (PREDICTED: pheophorbide a oxygenase, chloroplastic [Cucumis melo])

HSP 1 Score: 269.6 bits (688), Expect = 2.400e-68
Identity = 176/497 (35.41%), Postives = 237/497 (47.69%), Query Frame = 0
Query:   67 SSNDDVHEAFDWWKQWYPVALTRDLDSAVPTKVTLLGRDLVLWKEGAVAAAASGNPPAWRCFIDRCPHRMAPLSEGRVDSKTGHLQCAYHGWEFGGSGACSKIPQADPDADQSEATARRSRRACATALPSQEAQGMIWVWPDTSDKGLAASKVVKPTLMEDVDEKAMSYLVVCRDMPYGFETLLENGIDPSHLPFAHHNIISNRNQAAFIDIKVDEIRNDGFDSAQFFPKXXXXXXXXXXXXXXXXXXXXXXXXXXXXTVEHGSGNLDQHRIGSLVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPPMVKVAQSLHFRPPTLLYQVINVTEILNKLPLLPKRERLIRIVTYAVPTGPGRSRVIYRFLRNYF---LPPLAWLRWPPEWIEHQRILRVLDSDTVFLHGQERERALLDPSTVQDVDKTY----YMPTAADGSVRALRKWLARF--GTPKWLISGLPSSLPQTP-DRRTLLDRYASHTAHCKVCRGALR 554
            S N+     F W   WYPV+L  DLD A+PT   LLGRD+VLW +      +SG    W  F DRCPHR+APLSEGR+D + G+LQC+YHGW F G G+C KIPQA  +  +S   A +S RACAT  P+  +QG+++VWPD  +    A+    P L +D D+   S + + RD+ YG++TL+EN  DPSH+ FAHH +   R++A  +  K+D     GF  A                                       GN                                          P +    S  F  P      IN  EI  KLPLL  ++ +I I ++ VP GPG++R I    RN+F   +P  AW +  P W EH    +V D D + L GQE+    ++ ST  DV+K Y    + PT AD  V A R WL R   G P+W  +     LP T   +R +LDR+  HT HC  C+GA +
Sbjct:   85 SGNESSSTPFSWRDNWYPVSLIEDLDPALPTPFQLLGRDIVLWFD-----KSSGE---WVAFDDRCPHRLAPLSEGRID-EGGNLQCSYHGWSFDGCGSCVKIPQASSEGPESR--AHQSPRACATRFPTLVSQGLLFVWPD-ENGWERANATTPPRLPDDFDKPEFSSVTIQRDLFYGYDTLMENVSDPSHIDFAHHKVTGRRDRAKPLPFKLDSNGPWGFSGA-------------------------------------NKGN------------------------------------------PRI----SAKFIAPC---YYINKVEIDTKLPLLGDQKWVIWICSFNVPMGPGKTRSIVCSARNFFQFSMPGPAWWQVVPRWHEHWTSNKVYDGDMIVLQGQEKIFLSMEGST--DVNKEYTKITFTPTQADRLVLAFRNWLRRHGKGQPEWFRASSQQPLPSTVLSKRQMLDRFEQHTLHCSSCKGAYK 481          
BLAST of NO09G00660 vs. NCBI_GenBank
Match: XP_023519435.1 (pheophorbide a oxygenase, chloroplastic [Cucurbita pepo subsp. pepo])

HSP 1 Score: 264.6 bits (675), Expect = 7.600e-67
Identity = 174/503 (34.59%), Postives = 238/503 (47.32%), Query Frame = 0
Query:   67 SSNDDVHEAFDWWKQWYPVALTRDLDSAVPTKVTLLGRDLVLWKEGAVAAAASGNPPAWRCFIDRCPHRMAPLSEGRVDSKTGHLQCAYHGWEFGGSGACSKIPQADPDADQSEATARRSRRACATALPSQEAQGMIWVWPDTSDKGLAASKVVKPTLMEDVDEKAMSYLVVCRDMPYGFETLLENGIDPSHLPFAHHNIISNRNQAAFIDIKVDEIRNDGFDSAQFFPKXXXXXXXXXXXXXXXXXXXXXXXXXXXXTVEHGSGNLDQHRIGSLVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPPMVKVAQSLHFRPPTLLYQVINVTEILNKLPLLPKRERLIRIVTYAVPTGPGRSRVIYRFLRNYF---LPPLAWLRWPPEWIEHQRILRVLDSDTVFLHGQERERALLDPSTVQDVDKTY----YMPTAADGSVRALRKWLARF--GTPKWLISGLPSSLPQTP-DRRTLLDRYASHTAHCKVCRGALRNLGRLR 560
            S N+     F W   WYPV+L  DLD A+PT   LLGRD+VLW + + +         W  F D+CPHR+APLSEGR+D + G+LQC+YHGW F G G+C KIPQA   A+  E+ A +S RACAT  P+  +QG+++VWPD  +    A+    P L +D  +   S + + RD+ YG++TL+EN  DPSH+ FAHH +   R++A  +  K+D     GF  A                                       GN                                          P +    S  F  P      IN  EI  KLP+L  ++ +I I ++ VP GPG++R I    RN+F   +P  AW +  P W EH    +V D D + L GQE+    ++ ST  DV+K Y    + PT AD  V A R WL R   G P+W  +     LP T   +R +LDR+  HT HC  CRGA +    L+
Sbjct:   86 SGNESSSSPFSWRDNWYPVSLIEDLDPALPTPFQLLGRDIVLWFDKSRS--------EWVAFDDKCPHRLAPLSEGRID-EDGNLQCSYHGWSFDGCGSCVKIPQA--SAEGPESRAHQSPRACATRFPTLVSQGLLFVWPD-ENGWERANATTPPRLPDDFYKPEFSSVTIQRDLFYGYDTLMENVSDPSHIDFAHHKVTGRRDRAKPLPFKLDSNGPWGFSGA-------------------------------------NKGN------------------------------------------PRI----SAKFVAPC---YYINKVEIDTKLPVLGDQKWVIWICSFNVPMGPGKTRSIVCSARNFFQFSMPGPAWWQLVPRWHEHWTSNKVYDGDMIVLQGQEKIFLSMEGST--DVNKEYTKITFTPTQADRLVLAFRNWLRRHGKGQPEWFGASNQQPLPSTVLSKRQMLDRFEQHTLHCSSCRGAYKTFQTLQ 488          
BLAST of NO09G00660 vs. NCBI_GenBank
Match: XP_022970307.1 (pheophorbide a oxygenase, chloroplastic [Cucurbita maxima])

HSP 1 Score: 263.5 bits (672), Expect = 1.700e-66
Identity = 171/501 (34.13%), Postives = 236/501 (47.11%), Query Frame = 0
Query:   69 NDDVHEAFDWWKQWYPVALTRDLDSAVPTKVTLLGRDLVLWKEGAVAAAASGNPPAWRCFIDRCPHRMAPLSEGRVDSKTGHLQCAYHGWEFGGSGACSKIPQADPDADQSEATARRSRRACATALPSQEAQGMIWVWPDTSDKGLAASKVVKPTLMEDVDEKAMSYLVVCRDMPYGFETLLENGIDPSHLPFAHHNIISNRNQAAFIDIKVDEIRNDGFDSAQFFPKXXXXXXXXXXXXXXXXXXXXXXXXXXXXTVEHGSGNLDQHRIGSLVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPPMVKVAQSLHFRPPTLLYQVINVTEILNKLPLLPKRERLIRIVTYAVPTGPGRSRVIYRFLRNYF---LPPLAWLRWPPEWIEHQRILRVLDSDTVFLHGQERERALLDPSTVQDVDKTY----YMPTAADGSVRALRKWLARF--GTPKWLISGLPSSLPQTP-DRRTLLDRYASHTAHCKVCRGALRNLGRLR 560
            N+     F W   WYPV+L  DLD A+PT   LLGRD+VLW + + +         W  F D+CPHR+APLSEGR+D + G+LQC+YHGW F G G+C KIPQA  +  +S   A +S RACAT  P+  +QG+++VWPD  +    A+    P L +D  +   S + + RD+ YG++TL+EN  DPSH+ FAHH +   R++A  +  K+D     GF  A                                       GN                                          P +    S  F  P      IN  EI  KLP++  ++ +I I ++ VP GPG++R I    RN+F   +P  AW +  P W EH    +V D D + L GQE+    ++ ST  DV+K Y    + PT AD  V A R WL R   G P+W  +     LP T   +R +LDR+  HT HC  CRGA +    L+
Sbjct:   87 NESSSSPFSWRDNWYPVSLIEDLDPALPTPFQLLGRDIVLWFDKSRS--------EWVAFDDKCPHRLAPLSEGRID-EDGNLQCSYHGWSFDGCGSCVKIPQASSEGPESR--AHQSPRACATRFPTMVSQGLLFVWPD-ENGWERANATTPPRLPDDFYKPEFSSVTIQRDLFYGYDTLMENVSDPSHIDFAHHKVTGRRDRAKPLPFKLDSNGPWGFSGA-------------------------------------NKGN------------------------------------------PRI----SAKFVAPC---YYINKVEIDTKLPVVGDQKWVIWICSFNVPMGPGKTRSIVCSARNFFQFSMPGPAWWQLVPRWHEHWTSNKVYDGDMIVLQGQEKIFLSMEDST--DVNKEYTKITFTPTQADRLVLAFRNWLRRHGKGQPEWFGASSQQPLPSTVLSKRQMLDRFEQHTLHCSSCRGAYKTFQTLQ 487          
BLAST of NO09G00660 vs. NCBI_GenBank
Match: CEM11347.1 (unnamed protein product [Vitrella brassicaformis CCMP3155])

HSP 1 Score: 263.1 bits (671), Expect = 2.200e-66
Identity = 200/653 (30.63%), Postives = 297/653 (45.48%), Query Frame = 0
Query:   30 PKSLFPKQQSRRAS--TAGTSNLVSATTPTSSS---------VAFTGSSSNDDVHE---AFDWWKQWYPVALTRDLDSAVPTKVTLLGRDLVLWKEGAVAAAASGNPPAWRCFIDRCPHRMAPLSEGRVDSKTGHLQCAYHGWEFGGSGACSKIPQADPDADQSEATARRSRRACATALPSQEAQGMIWVWPDTSDKGLAASKVVKPTLMEDVDE-----KAMSYLVVCRDMPYGFETLLENGIDPSHLPFAHHNIISNRNQAAFIDIKVDEIRNDGFDSAQFFPKXXXXXXXXXXXXXXXXXXXXXXXXXXXXTVEHGSGNLDQHRIGSLVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPPMVKVAQSLHFRPPTLLYQVIN------------VTEILNKLPLLPKRERLIR----------IVTYAVPTGPGRSRVIYRFLRNYFLPPLAWLRWP-----PEWIEHQRILRVLDSDTVFLHGQERERALLDPSTVQDVDKTYYMPTAADGSVRALRKWLARFGTPKWLISGLPSSL-PQTPDRRTLLDRYASHTAHCKVCRGA------LRNLGR-LRHGIGF-----MSVMAFYL---GLLGQSVYTRLAGGF-----LTVLGIT--GSLIIKGFEERFYFQPWDH 614
            P  LF     RR++  TA  S +++A +P + +         ++FT ++S     E    FDWW+QWYPVA+  DL    P + T+L    V+W + A    A+          D CPHR+APLSEGR+ S  G L C YHGWEF G+GAC+KIPQ +  A ++   AR+++RAC   +P  EA  +IW++PD++ +G AAS+ V+P  + + D      K     +  R + Y ++TL+EN  DPSH+PFAHH I  NRN+A  I +KVD + + GF                                              Q   G+                                      +   +HFRPP LLY  I+            +  +L+K+ L PK  + ++          +V YAVP+ PG+S +I RF+ +      A  RW        W +H   + V D D + +H QER R     + ++  D+ YYMP  AD +VR+ R+WL   G  K    G    L P   DR+ L DR+ SHT +C +CR A      LR+L   L  G+G      ++ MAF     GLL + + + + G       L V G+   G+  + G E R+ +  ++H
Sbjct:   31 PGRLFGASGGRRSARRTALPSAVLTAPSPAAKTMPPRTDNIELSFTPAASEASEKEDAGTFDWWRQWYPVAIASDLGKKQPRQFTVLNEHFVVWWDEATQKFAAAK--------DACPHRLAPLSEGRI-SDDGKLHCTYHGWEFDGTGACTKIPQVEAKAQEA---ARKNKRACLQTVPCTEAHALIWIFPDSTREGWAASREVEPATVAEFDTVPELIKTKDNGLFFRVLNYNYDTLVENVGDPSHVPFAHHGIQGNRNRAGPIRMKVDNLTDAGFAVTSI-----------------------------------------QDLFGT-------------------------------------NLTTRIHFRPPCLLYYQIDFSQLAGVLKKRPIIRLLSKIGLAPKITKPVKSGMLDGHKFYLVVYAVPSAPGQSYIITRFVAS------AGTRWRNVKSLMRWDDHLENMAVTDGDNMHVHYQER-RLREHENGLEKFDRAYYMPAPADTAVRSFRRWLMNDGGGKPSWKGSTGQLGPLMTDRKKLFDRWESHTKYCPICRKAYAITRVLRSLTTVLSIGLGLDALTSVAAMAFLFPPGGLLSRFLMSCMGGAALWGVPLLVSGVCGYGAYRLHGLERRWVYTDYNH 586          
BLAST of NO09G00660 vs. NCBI_GenBank
Match: GAQ78701.1 (Pheophorbide a oxygenase [Klebsormidium nitens])

HSP 1 Score: 262.3 bits (669), Expect = 3.800e-66
Identity = 185/591 (31.30%), Postives = 262/591 (44.33%), Query Frame = 0
Query:   36 KQQSRRASTAGTSNL----VSATTPTSSSVAFTGSSSNDDVHEAFDWWKQWYPVALTRDLDSAVPTKVTLLGRDLVLWKEGAVAAAASGNPPAWRCFIDRCPHRMAPLSEGRVDSKTGHLQCAYHGWEFGGSGACSKIPQADPDADQSEATARRSRRACATALPSQEAQGMIWVWPDTSDKGLAASKVVKPTLMEDVDEKAMSYLVVCRDMPYGFETLLENGIDPSHLPFAHHNIISNRNQAAFIDIKVDEIRNDGFDSAQFFPKXXXXXXXXXXXXXXXXXXXXXXXXXXXXTVEHGSGNLDQHRIGSLVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPPMVKVAQSLHFRPPTLLYQVINVTEILNKLPLLPKRERLIRIVTYAVPTGPGRSRVIYRFLRNYFLPPLAWL-RWPPEWIEHQRILRVLDSDTVFLHGQERERALLDPSTVQDVDKTYYMPTAADGSVRALRKWLARF--GTPKWLISGLPSSLPQTPDRRTLLDRYASHTAHCKVCRGALRNLGRLRHGIGF--MSVMAFYLGLLGQSVYTRLAGGFLTVLG----ITGSLIIKGFEERFYFQPWDH 614
            ++Q+R     GT  L       + P S       + S    H+ F W + WYP+A+ RD+   +P  VT+LG+ LVLW +        G P  WR F+D CPHR+APLSEGR+D + G LQC+YHGW F G   C  IPQA+ +  Q  A A  S RACA   P+    G++WVW D +    A  +   P  + ++D+ + S  +V RD PYG++ L+EN +DPSHLPFAHH I+SNR++A  + I +      GF + Q                                   H  G  D                                                  F  P L  Q IN+     K        + IR+  +  P  PGRSR+ Y F +N+    + WL    P W+ H R   +LDSD + LH  E+ R   +     +  + Y+MPTAAD  + A R+WL +   G P +     P+     P R  L+DRY SHT HC  C  A+R L  L+ G+ F  +S++A    L    V    A G   +LG       +  +KG  ++FY + + H
Sbjct:  113 QEQARGLQGDGTITLSREEEGESLPGSEPAQKDANQSAPGGHD-FQWAENWYPIAVERDVRKELPLAVTILGKPLVLWWDR--NKREKGQPGGWRAFLDMCPHRLAPLSEGRID-EAGRLQCSYHGWSFDGDARCQSIPQAEKEGPQ--AAAHSSPRACAQPFPTLLQNGLVWVWLDPATADTALKR--PPPHVPEMDDPSFSKDLVARDFPYGYDFLVENLMDPSHLPFAHHGIMSNRSRAGPLRITLRGENPRGFVAEQ-----------------------------------HPQGKAD--------------------------------------------------FSAPVLFTQDINIPP-KEKDAAKGGSGKKIRLCFWLTPVSPGRSRLFYAFPQNF----VTWLFALIPRWLLHIRQHSILDSDLMILHLAEK-RLQREGGGTDNWSRAYFMPTAADRYIVAFRRWLTKHGGGQPDFGPQPEPAPTAAQPGRMELMDRYESHTKHCSSCSKAVRRLEALQKGLAFGSVSIVALVSALASGGVVKAQAYGPYALLGALVMAVSAFGLKGVIQKFYVEDYIH 604          
BLAST of NO09G00660 vs. NCBI_GenBank
Match: XP_022964963.1 (pheophorbide a oxygenase, chloroplastic [Cucurbita moschata])

HSP 1 Score: 262.3 bits (669), Expect = 3.800e-66
Identity = 181/540 (33.52%), Postives = 250/540 (46.30%), Query Frame = 0
Query:   41 RASTAGTSNLVSATTPTSSSVAFTGSSSNDDVHEA-----------FDWWKQWYPVALTRDLDSAVPTKVTLLGRDLVLWKEGAVAAAASGNPPAWRCFIDRCPHRMAPLSEGRVDSKTGHLQCAYHGWEFGGSGACSKIPQADPDADQSEATARRSRRACATALPSQEAQGMIWVWPDTSDKGLAASKVVKPTLMEDVDEKAMSYLVVCRDMPYGFETLLENGIDPSHLPFAHHNIISNRNQAAFIDIKVDEIRNDGFDSAQFFPKXXXXXXXXXXXXXXXXXXXXXXXXXXXXTVEHGSGNLDQHRIGSLVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPPMVKVAQSLHFRPPTLLYQVINVTEILNKLPLLPKRERLIRIVTYAVPTGPGRSRVIYRFLRNYF---LPPLAWLRWPPEWIEHQRILRVLDSDTVFLHGQERERALLDPSTVQDVDKTY----YMPTAADGSVRALRKWLARF--GTPKWLISGLPSSLPQTP-DRRTLLDRYASHTAHCKVCRGALRNLGRLR 560
            RAST     + +  TP S++ +    + N D  E            F W   WYPV+L  DLD A+PT   LLGRD+VLW + + +         W  F D+CPHR+APLSEGR+D + G+LQC+YHGW F G G+C KIPQA  +  +S   A +S RACAT  P+  +QG+++VWPD  +    A+    P L +D  +   S + + RD+ YG++TL+EN  DPSH+ FAHH +   R++A  +  K+D     GF  A                                       GN                                          P +    S  F  P      IN  EI  KLP+L  ++ +I I ++ VP GPG++R I    RN+F   +P  AW +  P W EH    +V D D + L GQE+    ++ ST  DV+K Y    + PT AD  V A R WL R   G P+W  +     LP T   +R +LDR+  HT HC  CRGA +    L+
Sbjct:   48 RASTIRPVRVAAPPTPPSTADSEKSEAENLDEVEVDESGNESSSSPFSWRDNWYPVSLIEDLDPALPTPFQLLGRDIVLWFDKSRS--------EWVAFDDKCPHRLAPLSEGRID-EDGNLQCSYHGWSFDGCGSCVKIPQASSEGPESR--AHQSPRACATRFPTMVSQGLLFVWPD-ENGWERANATTPPRLPDDFYKPEFSSVTIQRDLFYGYDTLMENVSDPSHIDFAHHKVTGRRDRAKPLPFKLDSNGPWGFSGA-------------------------------------NKGN------------------------------------------PRI----SAKFVAPC---YYINKVEIDTKLPVLGDQKWVIWICSFNVPMGPGKTRSIVCSARNFFQFSMPGPAWWQLVPRWHEHWTSNKVYDGDMIVLQGQEKIFLSMEDST--DVNKEYTKITFTPTQADRLVLAFRNWLRRHGKGQPEWFGASSQQPLPSTVLSKRQMLDRFEQHTLHCSSCRGAYKTFQTLQ 487          
BLAST of NO09G00660 vs. NCBI_GenBank
Match: XP_022152935.1 (pheophorbide a oxygenase, chloroplastic [Momordica charantia])

HSP 1 Score: 260.4 bits (664), Expect = 1.400e-65
Identity = 180/552 (32.61%), Postives = 255/552 (46.20%), Query Frame = 0
Query:   21 SQAFVGGQLPK---SLFPKQQSRRASTAGTSNLVSATTPTSSSVAFTGSSSNDDVHEAFDWWKQWYPVALTRDLDSAVPTKVTLLGRDLVLWKEGAVAAAASGNPPAWRCFIDRCPHRMAPLSEGRVDSKTGHLQCAYHGWEFGGSGACSKIPQADPDADQSEATARRSRRACATALPSQEAQGMIWVWPDTSDKGLAASKVVKPTLMEDVDEKAMSYLVVCRDMPYGFETLLENGIDPSHLPFAHHNIISNRNQAAFIDIKVDEIRNDGFDSAQFFPKXXXXXXXXXXXXXXXXXXXXXXXXXXXXTVEHGSGNLDQHRIGSLVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPPMVKVAQSLHFRPPTLLYQVINVTEILNKLPLLPKRERLIRIVTYAVPTGPGRSRVIYRFLRNYF---LPPLAWLRWPPEWIEHQRILRVLDSDTVFLHGQER---ERALLDPSTV-QDVDKTYYMPTAADGSVRALRKWLARF--GTPKWLISGLPSSLPQTP-DRRTLLDRYASHTAHCKVCRGALRNLGRLR 560
            S  F+  +LP    +L P + +   +   T++   +    S  V     S N+     F W   WYPV+L  DLD A+PT   LLGRD+VLW + +           W  F D+CPHR+APLSEGR+D + G+LQC+YHGW F G G+C KIPQA  +  +S   A +S RACAT  P+  +QG+++VWPD  +     +    P L +D D+   S + + RD+ YG++TL+EN  DPSH+ FAHH +   R++A  +  K+D     GF  A                                       GN                                          P +    S  F  P      IN  EI  KLP+L  ++ +I I ++ VP GPG++R I    RN+F   +P  AW +  P W EH    +V D D + L GQE+    +A+ D + V ++  K  + PT AD  V A R WL R   G P+W  +     LP T   +R +LDR+  HT HC  CRGA ++   L+
Sbjct:   37 SPNFLARKLPSRAAALRPVRVAAPPTPPSTADSEKSAVENSDEVE-VDESGNESSSSPFSWRDNWYPVSLIEDLDPALPTPFQLLGRDIVLWFDKSRG--------EWVAFDDKCPHRLAPLSEGRID-EGGNLQCSYHGWSFDGCGSCVKIPQASSEGPESR--AHQSPRACATRFPTLVSQGLLFVWPD-ENGWERVNATAPPRLPDDFDKPEFSSVTIQRDLFYGYDTLMENVSDPSHIDFAHHKVTGRRDRAKPLPFKLDSNGPWGFSGA-------------------------------------NKGN------------------------------------------PRI----SAKFVAPC---YYINKVEIDTKLPVLGDQKWVIWICSFNVPMGPGKTRSIVCSARNFFQFSMPGPAWWQVVPRWHEHWTSNKVYDGDMIVLQGQEKIFLSKAMEDSTDVNKEYTKITFTPTQADRLVLAFRNWLRRHGKGQPEWFGASSQQPLPSTVLSKRQMLDRFEQHTLHCSSCRGAYKSFQTLQ 489          
The following BLAST results are available for this feature:
BLAST of NO09G00660 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM27741.12.000e-22465.30pheophorbide a oxygenase [Nannochloropsis gaditana... [more]
EWM26188.12.700e-8034.71Pheophorbide a oxygenase [Nannochloropsis gaditana... [more]
GAQ92150.16.200e-6932.42Pheophorbide a oxygenase [Klebsormidium nitens][more]
XP_008462467.12.400e-6835.41PREDICTED: pheophorbide a oxygenase, chloroplastic... [more]
XP_023519435.17.600e-6734.59pheophorbide a oxygenase, chloroplastic [Cucurbita... [more]
XP_022970307.11.700e-6634.13pheophorbide a oxygenase, chloroplastic [Cucurbita... [more]
CEM11347.12.200e-6630.63unnamed protein product [Vitrella brassicaformis C... [more]
GAQ78701.13.800e-6631.30Pheophorbide a oxygenase [Klebsormidium nitens][more]
XP_022964963.13.800e-6633.52pheophorbide a oxygenase, chloroplastic [Cucurbita... [more]
XP_022152935.11.400e-6532.61pheophorbide a oxygenase, chloroplastic [Momordica... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL119nonsL119Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR021ncniR021Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR127ngnoR127Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK010531NSK010531Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO09G00660.1NO09G00660.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|555321gene_4492Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100034g24gene2836Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO09G00660.1NO09G00660.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO09G00660 ID=NO09G00660|Name=NO09G00660|organism=Nannochloropsis oceanica|type=gene|length=2027bp
ATGACTCTGCTGATGTCAATTCCCCTCCTCATGGTCTTGGGCCTAGTGCT
GCCGTACACCTCGCAGGCGTTTGTGGGGGGACAGTTGCCAAAATCTTTAT
TTCCGAAACAACAGAGTCGCCGGGCTAGCACCGCTGGGACTTCGAACTTA
GTGTCAGCCACGACACCAACATCGTCTTCCGTAGCCTTCACGGGCAGCAG
CAGCAATGACGATGTCCATGAAGCATTTGACTGGTGGAAACAATGGTACC
CCGTGGCCCTGACTCGGGATTTAGACAGTGCGGTGCCAACCAAAGTGACG
TTGCTGGGTCGCGACTTGGTGCTATGGAAAGAGGGTGCGGTCGCCGCAGC
AGCCAGCGGTAATCCTCCTGCCTGGCGATGCTTCATCGATCGATGCCCCC
ATCGCATGGCCCCGCTGTCCGAAGGCCGGGTAGACAGCAAGACGGGTCAT
TTGCAATGCGCGTACCACGGCTGGGAATTCGGCGGCTCGGGGGCGTGTAG
CAAAATTCCGCAGGCGGACCCAGACGCCGACCAAAGTGAGGCCACCGCTA
GGCGTTCGAGACGCGCGTGTGCCACGGCCCTGCCCTCGCAAGAGGCTCAA
GGCATGATTTGGGTGTGGCCAGACACCTCGGACAAGGGCCTGGCGGCTTC
AAAGGTAGTAAAGCCGACGCTGATGGAGGACGTAGACGAGAAAGCAATGT
CGTATTTGGTGGTTTGTCGAGATATGCCGgtacgtcatttgtatacattc
atgggtgggtgcgaagaagaggaggtgtggaggacggacacgttgagtga
tgtcccgtttcgtctgtgggccacgacaaatccctcaatgcatgcccgcg
gcgtccacttttctccatcccttattcccatggcacccgatcccccaaac
agTATGGCTTCGAAACCCTGCTCGAAAACGGCATCGACCCCTCCCATCTC
CCCTTCGCCCACCACAATATCATCAGCAATCGTAATCAGGCCGCCTTTAT
TGACATAAAGGTAGACGAGATCCGGAATGACGGCTTTGATTCCGCTCAAT
TCTTTCCCAAGCGCCGCCGCATGCTCCCCTCGGTAGCAGAAGCTGCACCA
GCAGGTGGAGGAGGATCGGCACGACAACAACGCCAAGAGCCAAAGACTGT
CGAGCACGGAAGCGGGAACCTGGATCAGCACCGTATAGGCTCTTTGGTAG
ATGATGCACACGACGATGACAACAACAAGGAGGAATCAGCAACAGCAGCA
GCACACGGAGACCCGGGAGGACACCGACGCAAACGGACCCTCCCCCCCAT
GGTGAAAGTCGCCCAGTCCCTCCACTTCCGGCCCCCCACCCTTCTTTATC
AAGTCATTAACGTCACGGAGATTCTCAACAAATTACCCCTTCTCCCCAAG
CGCGAACGACTCATCCGCATAGTCACATATGCCGTGCCCACTGGCCCCGG
CCGGTCTCGGGTCATCTACCGCTTCCTCCGCAACTACTTCCTCCCTCCCT
TGGCCTGGCTCCGATGGCCTCCCGAGTGGATTGAGCACCAACGCATTCTT
CGCGTGCTCGACAGCGACACTGTCTTCCTTCACGGACAAGAACGGGAGCG
GGCATTGCTCGACCCAAGCACTGTCCAAGACGTCGATAAGACTTATTACA
TGCCCACCGCTGCTGATGGTTCCGTGCGCGCCCTCCGGAAATGGCTCGCG
CGCTTTGGCACGCCGAAGTGGCTTATATCTGGTTTACCGTCGTCGCTTCC
GCAGACCCCGGATCGACGCACACTTTTGGATAGATATGCCTCACACACGG
CGCATTGTAAAGTGTGCAGGGGGGCGTTACGGAATTTGGGGAGGTTGAGG
CATGGGATAGGGTTCATGTCGGTGATGGCTTTTTATCTGGGGTTGCTGGG
ACAGAGTGTGTACACGCGGTTAGCCGGGGGATTCTTAACGGTGTTGGGGA
TAACGGGGAGTTTAATTATCAAGGGCTTCGAGGAGCGTTTCTATTTTCAG
CCATGGGATCATGGGCGGAATCACTGA
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protein sequence of NO09G00660.1

>NO09G00660.1-protein ID=NO09G00660.1-protein|Name=NO09G00660.1|organism=Nannochloropsis oceanica|type=polypeptide|length=618bp
MTLLMSIPLLMVLGLVLPYTSQAFVGGQLPKSLFPKQQSRRASTAGTSNL
VSATTPTSSSVAFTGSSSNDDVHEAFDWWKQWYPVALTRDLDSAVPTKVT
LLGRDLVLWKEGAVAAAASGNPPAWRCFIDRCPHRMAPLSEGRVDSKTGH
LQCAYHGWEFGGSGACSKIPQADPDADQSEATARRSRRACATALPSQEAQ
GMIWVWPDTSDKGLAASKVVKPTLMEDVDEKAMSYLVVCRDMPYGFETLL
ENGIDPSHLPFAHHNIISNRNQAAFIDIKVDEIRNDGFDSAQFFPKRRRM
LPSVAEAAPAGGGGSARQQRQEPKTVEHGSGNLDQHRIGSLVDDAHDDDN
NKEESATAAAHGDPGGHRRKRTLPPMVKVAQSLHFRPPTLLYQVINVTEI
LNKLPLLPKRERLIRIVTYAVPTGPGRSRVIYRFLRNYFLPPLAWLRWPP
EWIEHQRILRVLDSDTVFLHGQERERALLDPSTVQDVDKTYYMPTAADGS
VRALRKWLARFGTPKWLISGLPSSLPQTPDRRTLLDRYASHTAHCKVCRG
ALRNLGRLRHGIGFMSVMAFYLGLLGQSVYTRLAGGFLTVLGITGSLIIK
GFEERFYFQPWDHGRNH*
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Synonyms
Publications