NO09G00610, NO09G00610 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO09G00610 vs. NCBI_GenBank
Match: EWM27730.1 (short-chain dehydrogenase reductase sdr [Nannochloropsis gaditana]) HSP 1 Score: 308.1 bits (788), Expect = 2.500e-80 Identity = 158/221 (71.49%), Postives = 182/221 (82.35%), Query Frame = 0 Query: 8 SPLQHETQTTNVMKSMSAAFAISIVIGSNRGIGLELCKQLHARGDCVVGVCRKASDELKGLGLWKVVEGVDVTKDEQVRSLATLDLGGGAVDSLFLNAGIGDGIEDSL-GNLDYAQIMRSFDVNACGPLRCVQTLLPRLKKGSKVLLVTSRMGSVDDNTSGGSYGYRMSKSALNIAGKSLSLDLHPKGVSVLVLHPGFVKTDMTRPYWGGRGIVSPAESAE 228 SP+ + T MK +S+AF SIVIG NRGIGLELCKQLH RGD VVGVCRKASDELK LGLWKV+E +D+T +E R L +L G VD+L+LNAGIGDGIEDSL L+Y QI+RSF+ NA GPLRCVQ+ LP LK+GSKVLLVTSRMGSV+DNTSGGSYGYRMSK+ALNI GKSLSLDL KG++VLVLHPGFVKTDMT+ YWG +GI+SPA SA+ Sbjct: 75 SPISPDLVTRAEMKGISSAFTTSIVIGCNRGIGLELCKQLHIRGDRVVGVCRKASDELKALGLWKVMENMDITVEEDTRRLGADNL--GTVDNLWLNAGIGDGIEDSLVEGLNYGQILRSFETNAVGPLRCVQSFLPSLKRGSKVLLVTSRMGSVEDNTSGGSYGYRMSKAALNIVGKSLSLDLLHKGIAVLVLHPGFVKTDMTKLYWGEKGIISPATSAQ 293
BLAST of NO09G00610 vs. NCBI_GenBank
Match: WP_012627386.1 (KR domain-containing protein [Cyanothece sp. PCC 7425] >ACL44301.1 short-chain dehydrogenase/reductase SDR [Cyanothece sp. PCC 7425]) HSP 1 Score: 231.5 bits (589), Expect = 2.900e-57 Identity = 124/228 (54.39%), Postives = 159/228 (69.74%), Query Frame = 0 Query: 28 AISIVIGSNRGIGLELCKQLHARGDCVVGVCRKASDELKGLGLWKVVEGVDVTKDEQVRSLATLDLGGGAVDSLFLNAGIGDGIEDSLGNLDYAQIMRSFDVNACGPLRCVQTLLPRLKKGSKVLLVTSRMGSVDDNTSGGSYGYRMSKSALNIAGKSLSLDLHPKGVSVLVLHPGFVKTDMTRPYWGGRGIVSPAESAEGLIKRADDLTLRTSGQFLHALTGEVLPW 256 A ++ G+NRGIG E C+QL ARG+ V+ VCR AS++LK LG+ +V EG+D+T D V L LGG A+D L NAGI + +L NLD+ I F+VNA G LR LLP+LK G+K++L+TSRMGS+ DNTSG SYGYRMSK AL +AGKSL+LDL P+G++V +LHPG V+T MT GG ++P +S +GL+ R D LTL SG F HA GEVLPW Sbjct: 2 ATYLITGANRGIGYEYCRQLQARGETVIAVCRTASEDLKQLGI-RVEEGIDITSDAVVADLRD-RLGGLAIDVLINNAGILQRV--TLENLDFDSIREQFEVNALGALRVTHALLPKLKPGAKIVLMTSRMGSIGDNTSGSSYGYRMSKVALAMAGKSLALDLKPRGIAVAILHPGLVQTRMTNFSSGG---ITPEQSVKGLLARIDQLTLENSGTFWHA-NGEVLPW 221
BLAST of NO09G00610 vs. NCBI_GenBank
Match: WP_006511239.1 (KR domain-containing protein [Xenococcus sp. PCC 7305] >ELS01683.1 short-chain dehydrogenase of unknown substrate specificity [Xenococcus sp. PCC 7305]) HSP 1 Score: 229.6 bits (584), Expect = 1.100e-56 Identity = 123/225 (54.67%), Postives = 160/225 (71.11%), Query Frame = 0 Query: 31 IVIGSNRGIGLELCKQLHARGDCVVGVCRKASDELKGLGLWKVVEGVDVTKDEQVRSLATLDLGGGAVDSLFLNAGIGDGIEDSLGNLDYAQIMRSFDVNACGPLRCVQTLLPRLKKGSKVLLVTSRMGSVDDNTSGGSYGYRMSKSALNIAGKSLSLDLHPKGVSVLVLHPGFVKTDMTRPYWGGRGIVSPAESAEGLIKRADDLTLRTSGQFLHALTGEVLPW 256 +V G+NRGIGLE C+QL RGD V+ VCR AS +L+ LG+ + GVD+T +EQV LA L ++D L NA I + I SL +LD+ I R F+VNA G LR + LLP LK+GSKV+++TSRMGS+DDNTSGGSYGYRMSK AL++AGKSLS+DL P+G+SV +LHPG VKT MT G ++P +S +GL+ R ++L L +G F HA GE+LPW Sbjct: 5 LVTGANRGIGLEYCRQLQQRGDRVIAVCRSASSKLENLGI-TIETGVDITDEEQVGDLAR-RLKNQSIDVLINNAAIVERI--SLNSLDFDSIRRQFEVNAIGALRLTKALLPNLKQGSKVIMMTSRMGSIDDNTSGGSYGYRMSKVALSMAGKSLSVDLKPQGISVAILHPGLVKTRMTGFTDSG---ITPEQSVKGLLARIEELNLENTGTFWHA-NGEILPW 221
BLAST of NO09G00610 vs. NCBI_GenBank
Match: WP_054964638.1 (KR domain-containing protein [Thiohalorhabdus denitrificans] >KPV41881.1 short-chain dehydrogenase [Thiohalorhabdus denitrificans] >SCY65337.1 Short-chain dehydrogenase [Thiohalorhabdus denitrificans]) HSP 1 Score: 229.2 bits (583), Expect = 1.500e-56 Identity = 113/225 (50.22%), Postives = 167/225 (74.22%), Query Frame = 0 Query: 31 IVIGSNRGIGLELCKQLHARGDCVVGVCRKASDELKGLGLWKVVEGVDVTKDEQVRSLATLDLGGGAVDSLFLNAGIGDGIEDSLGNLDYAQIMRSFDVNACGPLRCVQTLLPRLKKGSKVLLVTSRMGSVDDNTSGGSYGYRMSKSALNIAGKSLSLDLHPKGVSVLVLHPGFVKTDMTRPYWGGRGIVSPAESAEGLIKRADDLTLRTSGQFLHALTGEVLPW 256 ++ G+NRGIGLEL +Q H RGD V+ VCR+ S+EL+GLG+ ++++G+DVT+ E+V+ +A LG +D L+ NAGI +++SL N+++A + + F+VN GPL +L + +G+K+ L+TSRMGS+ DN SGG YGYRMSK+ALN AGKSLS+DL P+G++V +LHPG+V+T+MT+ GRG ++P E+AE L++R D+L L +G F H+ G VLPW Sbjct: 6 LITGANRGIGLELARQWHQRGDQVIAVCRQPSEELQGLGV-RIIDGIDVTRGEEVQRMAEA-LGDERIDLLYNNAGI--LLDESLENMNFATMEQQFEVNTLGPLHVTHAVLGNMGEGAKIGLMTSRMGSIADNDSGGRYGYRMSKAALNAAGKSLSVDLKPRGIAVAILHPGYVRTEMTQ----GRGHITPDEAAERLVQRMDELNLENTGTFWHS-DGSVLPW 221
BLAST of NO09G00610 vs. NCBI_GenBank
Match: WP_009784554.1 (KR domain-containing protein [Lyngbya sp. PCC 8106] >EAW36818.1 Short-chain dehydrogenase/reductase (SDR) superfamily protein [Lyngbya sp. PCC 8106]) HSP 1 Score: 228.4 bits (581), Expect = 2.500e-56 Identity = 121/228 (53.07%), Postives = 156/228 (68.42%), Query Frame = 0 Query: 28 AISIVIGSNRGIGLELCKQLHARGDCVVGVCRKASDELKGLGLWKVVEGVDVTKDEQVRSLATLDLGGGAVDSLFLNAGIGDGIEDSLGNLDYAQIMRSFDVNACGPLRCVQTLLPRLKKGSKVLLVTSRMGSVDDNTSGGSYGYRMSKSALNIAGKSLSLDLHPKGVSVLVLHPGFVKTDMTRPYWGGRGIVSPAESAEGLIKRADDLTLRTSGQFLHALTGEVLPW 256 A +V G+NRGIGLE C+QL RGD V+ VCR ASDELK L + +++ +D+T + + L LG +D L NAGI + I SL NLD+ I R F++NA GPLR Q LLP+L+ SKV+++TSRMGS++DNTSGGSYGYRMSK AL++AGKSLS DL P+ ++V +LHPG VKT MT G ++P ES GL+ R D L L +G F H+ GEVLPW Sbjct: 2 ATYLVTGANRGIGLEYCRQLQRRGDDVIAVCRSASDELKALNI-EIITNIDITSESCISELVK-RLGDRMIDVLINNAGIVERI--SLDNLDFESIRRQFEINAIGPLRLTQMLLPKLRNSSKVIIMTSRMGSIEDNTSGGSYGYRMSKVALSMAGKSLSHDLKPRQIAVAILHPGLVKTRMTNFTDSG---ITPEESVRGLLARIDQLNLENTGTFWHS-NGEVLPW 221
BLAST of NO09G00610 vs. NCBI_GenBank
Match: WP_015184988.1 (KR domain-containing protein [Microcoleus sp. PCC 7113] >AFZ20855.1 short-chain dehydrogenase of unknown substrate specificity [Microcoleus sp. PCC 7113]) HSP 1 Score: 228.0 bits (580), Expect = 3.300e-56 Identity = 123/228 (53.95%), Postives = 156/228 (68.42%), Query Frame = 0 Query: 28 AISIVIGSNRGIGLELCKQLHARGDCVVGVCRKASDELKGLGLWKVVEGVDVTKDEQVRSLATLDLGGGAVDSLFLNAGIGDGIEDSLGNLDYAQIMRSFDVNACGPLRCVQTLLPRLKKGSKVLLVTSRMGSVDDNTSGGSYGYRMSKSALNIAGKSLSLDLHPKGVSVLVLHPGFVKTDMTRPYWGGRGIVSPAESAEGLIKRADDLTLRTSGQFLHALTGEVLPW 256 A ++ G+NRGIG E C+QL RGD V+ VCR AS+ELK LG+ +V EG+D+T D V L LG A+D L NAGI + +L +L++ I F+VN G LR LLP LK GSK+ L+TSRMGS+ DNTSG SYGYRMSK AL++AGKSLSLDL P+ ++V +LHPG V+T MT GG ++P ES +GL+KR D+LTL +G F HA GEVLPW Sbjct: 2 ATYLITGTNRGIGYEYCRQLKERGDTVIAVCRTASEELKQLGV-RVEEGIDITSDASVADLCD-RLGDSAIDVLINNAGIVKRV--TLEDLNFDSIREQFEVNTLGALRVTHALLPNLKAGSKIALMTSRMGSIADNTSGSSYGYRMSKVALSMAGKSLSLDLKPREIAVAILHPGLVQTRMTNFTSGG---ITPEESVQGLLKRIDELTLENTGTFWHA-NGEVLPW 221
BLAST of NO09G00610 vs. NCBI_GenBank
Match: WP_023063964.1 (KR domain-containing protein [Lyngbya aestuarii] >ERT09902.1 short chain dehydrogenase family protein [Lyngbya aestuarii BL J]) HSP 1 Score: 228.0 bits (580), Expect = 3.300e-56 Identity = 123/228 (53.95%), Postives = 156/228 (68.42%), Query Frame = 0 Query: 28 AISIVIGSNRGIGLELCKQLHARGDCVVGVCRKASDELKGLGLWKVVEGVDVTKDEQVRSLATLDLGGGAVDSLFLNAGIGDGIEDSLGNLDYAQIMRSFDVNACGPLRCVQTLLPRLKKGSKVLLVTSRMGSVDDNTSGGSYGYRMSKSALNIAGKSLSLDLHPKGVSVLVLHPGFVKTDMTRPYWGGRGIVSPAESAEGLIKRADDLTLRTSGQFLHALTGEVLPW 256 A +V G+NRGIGLE C+QL RGD V+ VCR ASDELK L + ++ VD+T + + L L +D L NAGI + I SL NLD+ I + F+VNA GPLR LLP LK GSKV+++TSRMGS++DNTSGGSYGYRMSK AL++AGKSLSLDL P+ ++V +LHPG VKT MT G ++P ES +GL+ R D+L L +G F H+ GEVLPW Sbjct: 2 ATYLVTGANRGIGLEYCRQLQRRGDDVIAVCRSASDELKNLNV-QIETDVDITSETSISELLK-RLSDRPIDVLINNAGIVERI--SLDNLDFESIRKQFEVNAIGPLRFTHALLPNLKPGSKVIIMTSRMGSIEDNTSGGSYGYRMSKVALSMAGKSLSLDLKPRQIAVAILHPGLVKTRMTNFTDSG---ITPEESVKGLLARIDELNLENTGNFWHS-NGEVLPW 221
BLAST of NO09G00610 vs. NCBI_GenBank
Match: WP_106219554.1 (KR domain-containing protein [Aphanothece minutissima] >PSB39359.1 short-chain dehydrogenase [Aphanothece cf. minutissima CCALA 015]) HSP 1 Score: 228.0 bits (580), Expect = 3.300e-56 Identity = 125/228 (54.82%), Postives = 161/228 (70.61%), Query Frame = 0 Query: 28 AISIVIGSNRGIGLELCKQLHARGDCVVGVCRKASDELKGLGLWKVVEGVDVTKDEQVRSLATLDLGGGAVDSLFLNAGIGDGIEDSLGNLDYAQIMRSFDVNACGPLRCVQTLLPRLKKGSKVLLVTSRMGSVDDNTSGGSYGYRMSKSALNIAGKSLSLDLHPKGVSVLVLHPGFVKTDMTRPYWGGRGIVSPAESAEGLIKRADDLTLRTSGQFLHALTGEVLPW 256 A ++ G+NRGIGLE C+QL ARGD VV VCR S EL+ LG+ ++ G+D+T + +L LGG ++D+L LNAGI + SLG LD + R F+VNA PLR + LL L +G+KV+L+TSRMGS+DDN SGGSYGYRMSK ALN+AG+SL++DL P+G++V +LHPG V T MT + G+GI SP ES GL+ R D LTL TSG F HA G+VLPW Sbjct: 2 ATVLITGTNRGIGLEYCRQLQARGDTVVAVCRTPSPELERLGV-RIEAGIDLTDAAAIDALVE-RLGGLSLDALILNAGILE--STSLGALDAESLRRQFEVNAIAPLRLTRALLGHLGEGAKVILMTSRMGSIDDNGSGGSYGYRMSKVALNMAGRSLAIDLRPRGIAVALLHPGLVSTRMTG--FSGQGI-SPEESVRGLLARIDALTLETSGTFWHA-NGQVLPW 221
BLAST of NO09G00610 vs. NCBI_GenBank
Match: PHR81694.1 (short-chain dehydrogenase [Methylophaga sp.]) HSP 1 Score: 227.3 bits (578), Expect = 5.600e-56 Identity = 121/227 (53.30%), Postives = 157/227 (69.16%), Query Frame = 0 Query: 30 SIVIGSNRGIGLELCKQLHARGDCVVGVCRKASDELKGLGLWKVVEGVDVTKDEQVRSLATLDLGGGAVDSLFLNAGIGDGIE-DSLGNLDYAQIMRSFDVNACGPLRCVQTLLPRLKKGSKVLLVTSRMGSVDDNTSGGSYGYRMSKSALNIAGKSLSLDLHPKGVSVLVLHPGFVKTDMTRPYWGGRGIVSPAESAEGLIKRADDLTLRTSGQFLHALTGEVLPW 256 ++V GSNRGIGLE CKQL RG V+ CR +S+EL + + +V+E V+V+ E + +L L L G +D L NAGI DGI D L A R F+VN+ GPL Q L+ L +GSKV ++TSRMGS+DDN SGGSYGYRMSK+A+N AGKSLS+DL PKG++V +LHPG+V+TDMT G G++ ESA GL++R D+LTL TSG F H G++LPW Sbjct: 5 ALVTGSNRGIGLEFCKQLKYRGFDVIATCRTSSEELNNVDV-QVIENVEVSDPESLTNLVRL-LDGRRIDWLINNAGIADGIAMDELNEQTIASCKRMFEVNSLGPLLTTQALVNNLGEGSKVGIITSRMGSIDDNDSGGSYGYRMSKAAVNAAGKSLSIDLKPKGIAVAILHPGWVRTDMT----GHNGLIDTDESARGLLERMDELTLETSGSFWHT-NGDLLPW 224
BLAST of NO09G00610 vs. NCBI_GenBank
Match: PNW35416.1 (short-chain dehydrogenase [Euhalothece sp. KZN 001]) HSP 1 Score: 226.5 bits (576), Expect = 9.500e-56 Identity = 118/225 (52.44%), Postives = 158/225 (70.22%), Query Frame = 0 Query: 31 IVIGSNRGIGLELCKQLHARGDCVVGVCRKASDELKGLGLWKVVEGVDVTKDEQVRSLATLDLGGGAVDSLFLNAGIGDGIEDSLGNLDYAQIMRSFDVNACGPLRCVQTLLPRLKKGSKVLLVTSRMGSVDDNTSGGSYGYRMSKSALNIAGKSLSLDLHPKGVSVLVLHPGFVKTDMTRPYWGGRGIVSPAESAEGLIKRADDLTLRTSGQFLHALTGEVLPW 256 ++ G+NRGIGLE CKQL A+G+ V+ VCR+ S ELK LG+ K+ G+DVT DE V LA L G ++D L NAGI + +SL NLD+ + R F VNA PLR + LLP + KG K++L+TSRMGS++DNTSGG YGYRMSK+AL++AGKSL+ DL P+ + V +LHPG V+T MT + G ++ ES +GL+KR ++L L SG F H + GE+LPW Sbjct: 5 LITGTNRGIGLEYCKQLQAKGETVIAVCRQPSAELKNLGV-KIESGIDVTSDESVSELAQ-RLAGSSIDVLINNAGIIEA--NSLDNLDFESLERQFQVNAIAPLRVTKALLPLIPKGGKIILMTSRMGSIEDNTSGGFYGYRMSKTALSMAGKSLAEDLKPRQIPVGILHPGMVQTRMTD--FSG---ITTTESVQGLLKRIEELHLDNSGTFWHGVKGEILPW 220 The following BLAST results are available for this feature:
BLAST of NO09G00610 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO09G00610 ID=NO09G00610|Name=NO09G00610|organism=Nannochloropsis oceanica|type=gene|length=1240bpback to top protein sequence of NO09G00610.1 >NO09G00610.1-protein ID=NO09G00610.1-protein|Name=NO09G00610.1|organism=Nannochloropsis oceanica|type=polypeptide|length=256bpback to top Synonyms
Publications
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