NO09G00530, NO09G00530 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO09G00530 vs. NCBI_GenBank
Match: EWM27746.1 (Protein of unknown function DUF3411 [Nannochloropsis gaditana]) HSP 1 Score: 406.4 bits (1043), Expect = 1.100e-109 Identity = 270/427 (63.23%), Postives = 322/427 (75.41%), Query Frame = 0 Query: 3 RLLALALACVCGLGWVQAFTPLSPSIVSS--SSLKSGPWGQGRRKP-SSSSLPSVRRERPVGW-----GGIVVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVELPRDVTELLARAGRQFTDLPASTQKALVGGSMTSGLLQRYLELEKKGGVVSSLLGMGIFRDRLLMDGYLMDKMVIEMAVGTAAQLLAEWDRRREKLMAELDYAFADTLTCLVANFAAVLISAPSV-AGAVPPSGRNIPANMFQIVPPGARPYALTDRILSPFLKVPTLFAVGMAASLLGFGTTSLLTLIRNHLQS--AKKDPLPSSLPAAVGAGEWDTGRWFGKQTVAVVEEEVAPAEMPLLKTSVAVGVFLAVSTNIRYQVISGLVEERGIAQLLGHNKLADHLASFVARSFNSYIGSANMIDYLKFLGLQQ 419 RL+AL LAC GLG V+AF PLS + S SSLK W GRRKP S S+ S R ERP+GW GG + XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX V LP+DV+ELLA+AGR+FT+LP STQKAL+ GSMTS LL+RYLE+E++GG+V+ LLG+ IFRDRLLMD YLMDK+ IEMAVG AQ LAEWDRRREKL ELD+AFAD LTCLV+NFAAVLI+APS RNIPANMFQ+VPPG RPYAL+DR++ PFLK+PTLF VG+AASLLGFGTTS+LTL+R L S + P+ + +A GA E +E+V ++P++KTS+AVGVFLAVSTN+RYQ++SG+ EERGIA+ L HNKLADHLASF R+ N+++GS MIDYLKFL LQ+ Sbjct: 4 RLIALGLAC-GGLGAVRAFAPLSSCLARSPESSLKDEVW-HGRRKPFSLFSIASCRNERPIGWKSPAPGGGLHWRSGGAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSVTLPQDVSELLAKAGRKFTELPTSTQKALMAGSMTSALLKRYLEVERRGGMVAQLLGISIFRDRLLMDVYLMDKIGIEMAVGAVAQSLAEWDRRREKLFNELDFAFADLLTCLVSNFAAVLIAAPSAXXXXXXXXXRNIPANMFQMVPPGTRPYALSDRLVCPFLKMPTLFVVGLAASLLGFGTTSILTLLRKQLHSKPTQSSPIAPLIASATGAAE------------ETAQEDVV-QKIPVIKTSLAVGVFLAVSTNVRYQLVSGVFEERGIARYLAHNKLADHLASFGVRACNTFVGSGQMIDYLKFLKLQE 415
BLAST of NO09G00530 vs. NCBI_GenBank
Match: XP_015637423.1 (PREDICTED: protein RETICULATA-RELATED 4, chloroplastic [Oryza sativa Japonica Group] >AAV31344.1 unknown protein [Oryza sativa Japonica Group] >BAF17344.1 Os05g0388600 [Oryza sativa Japonica Group] >BAG97427.1 unnamed protein product [Oryza sativa Japonica Group] >EEE63586.1 hypothetical protein OsJ_18403 [Oryza sativa Japonica Group] >BAS93827.1 Os05g0388600 [Oryza sativa Japonica Group]) HSP 1 Score: 162.5 bits (410), Expect = 2.800e-36 Identity = 106/316 (33.54%), Postives = 167/316 (52.85%), Query Frame = 0 Query: 111 RDVTELLARAGRQFTDLPASTQKALVGGSMTSGLLQRYLELEKKGGVVSSLLGMGIFRDRLLMDGYLMDKMVIEMAVGTAAQLLAEWDRRREKLMAELDYAFADTLTCLVANFAAVLISAPSV---------AGAVPPSGRNIPANMFQIVPPGARPYALTDRILSPFLKVPTLFAVGMAASLLGFGTTSLLTLIRNHLQSAKKDPLPSSLPAAVGAGEWDTGRWFGKQTVAVVEEEVAPAEMPLLKTSVAVGVFLAVSTNIRYQVISGLVEERGIAQLLGHNKLADHLASFVARSFNSYIGSANMIDYLKFLGLQ 418 R+ +LA+ GR+ LPA A+ GG + ++QR+ +LE K G+ LL G F++RLL D + K+ +E VG + AE++RRRE + ELD+ AD + +VA+F V + AP+V AG++ N P N FQ+ G Y+L R+ + LFAVG +ASL+G G T+ L R ++ KD E ++P++ TSVA GV++AVS+N+RYQ+++G++E+R + LL H+KL F R+ N+++GS +DY K++G+Q Sbjct: 98 REALFVLAQLGRKLESLPADLAAAIEGGRVPGEIVQRFADLE-KSGLFRWLLQFGGFKERLLADDLFLAKVAMECGVGIFTKTAAEYERRRENFVKELDFVIADVVMAIVADFMLVWLPAPTVSLQPPLAVNAGSIAKFFHNCPDNAFQVALAGT-SYSLLQRVGAIMRNGAKLFAVGTSASLIGTGVTNALIKAR---KAVSKD------------------------------FEGESEDIPIVSTSVAYGVYMAVSSNLRYQILAGVIEQRMLEPLLHHHKLVLSALCFAVRTGNTFLGSLLWVDYAKWIGIQ 378
BLAST of NO09G00530 vs. NCBI_GenBank
Match: EAY97895.1 (hypothetical protein OsI_19813 [Oryza sativa Indica Group]) HSP 1 Score: 162.5 bits (410), Expect = 2.800e-36 Identity = 106/316 (33.54%), Postives = 167/316 (52.85%), Query Frame = 0 Query: 111 RDVTELLARAGRQFTDLPASTQKALVGGSMTSGLLQRYLELEKKGGVVSSLLGMGIFRDRLLMDGYLMDKMVIEMAVGTAAQLLAEWDRRREKLMAELDYAFADTLTCLVANFAAVLISAPSV---------AGAVPPSGRNIPANMFQIVPPGARPYALTDRILSPFLKVPTLFAVGMAASLLGFGTTSLLTLIRNHLQSAKKDPLPSSLPAAVGAGEWDTGRWFGKQTVAVVEEEVAPAEMPLLKTSVAVGVFLAVSTNIRYQVISGLVEERGIAQLLGHNKLADHLASFVARSFNSYIGSANMIDYLKFLGLQ 418 R+ +LA+ GR+ LPA A+ GG + ++QR+ +LE K G+ LL G F++RLL D + K+ +E VG + AE++RRRE + ELD+ AD + +VA+F V + AP+V AG++ N P N FQ+ G Y+L R+ + LFAVG +ASL+G G T+ L R ++ KD E ++P++ TSVA GV++AVS+N+RYQ+++G++E+R + LL H+KL F R+ N+++GS +DY K++G+Q Sbjct: 17 REALFVLAQLGRKLESLPADLAAAIEGGRVPGEIVQRFADLE-KSGLFRWLLQFGGFKERLLADDLFLAKVAMECGVGIFTKTAAEYERRRENFVKELDFVIADVVMAIVADFMLVWLPAPTVSLQPPLAVNAGSIAKFFHNCPDNAFQVALAGT-SYSLLQRVGAIMRNGAKLFAVGTSASLIGTGVTNALIKAR---KAVSKD------------------------------FEGESEDIPIVSTSVAYGVYMAVSSNLRYQILAGVIEQRMLEPLLHHHKLVLSALCFAVRTGNTFLGSLLWVDYAKWIGIQ 297
BLAST of NO09G00530 vs. NCBI_GenBank
Match: XP_009411873.1 (PREDICTED: protein RETICULATA-RELATED 4, chloroplastic [Musa acuminata subsp. malaccensis]) HSP 1 Score: 162.5 bits (410), Expect = 2.800e-36 Identity = 112/312 (35.90%), Postives = 165/312 (52.88%), Query Frame = 0 Query: 116 LLARAGRQFTDLPASTQKALVGGSMTSGLLQRYLELEKKGGVVSSLLGMGIFRDRLLMDGYLMDKMVIEMAVGTAAQLLAEWDRRREKLMAELDYAFADTLTCLVANFAAVLISAPSV---------AGAVPPSGRNIPANMFQIVPPGARPYALTDRILSPFLKVPTLFAVGMAASLLGFGTTSLLTLIRNHLQSAKKDPLPSSLPAAVGAGEWDTGRWFGKQTVAVVEEEVAPAEMPLLKTSVAVGVFLAVSTNIRYQVISGLVEERGIAQLLGHNKLADHLASFVARSFNSYIGSANMIDYLKFLGLQQ 419 +LA AGR LP A+ G + ++QR+ ELE K V LL G F++RLL D + K+ IE VG + AEW+RRRE M ELD+ FAD + +VA+F V + AP+V AG + N P N FQ+ G Y+ R+ + LF VG +ASL+G G T+ L +R ++ KD FG VE E ++P+L TSVA GV++AVS+N+RYQV++G++E+R + LL + KLA F R+ N+++GS +DY +++G+Q+ Sbjct: 97 VLAEAGRTLESLPKDLAAAIEAGRIPGSIVQRFFELE-KSPVFRWLLQFGGFKERLLADDLFLAKVAIECGVGIFTKTAAEWERRRENFMKELDFVFADVVMAIVADFMLVWLPAPTVSLRPPLQFNAGPIAKFFYNCPDNAFQVALAGT-SYSFLQRVGAIMRNGSKLFIVGTSASLIGTGITNALINVR---KAIDKD--------------------FG------VEAE----DVPILSTSVAYGVYMAVSSNLRYQVLAGVIEQRILEPLLHNQKLALSALCFAVRTGNTFLGSLLWVDYARWVGVQK 373
BLAST of NO09G00530 vs. NCBI_GenBank
Match: XP_020196303.1 (protein RETICULATA-RELATED 4, chloroplastic-like [Aegilops tauschii subsp. tauschii]) HSP 1 Score: 161.8 bits (408), Expect = 4.700e-36 Identity = 108/316 (34.18%), Postives = 168/316 (53.16%), Query Frame = 0 Query: 111 RDVTELLARAGRQFTDLPASTQKALVGGSMTSGLLQRYLELEKKGGVVSSLLGMGIFRDRLLMDGYLMDKMVIEMAVGTAAQLLAEWDRRREKLMAELDYAFADTLTCLVANFAAVLISAPSV---------AGAVPPSGRNIPANMFQIVPPGARPYALTDRILSPFLKVPTLFAVGMAASLLGFGTTSLLTLIRNHLQSAKKDPLPSSLPAAVGAGEWDTGRWFGKQTVAVVEEEVAPAEMPLLKTSVAVGVFLAVSTNIRYQVISGLVEERGIAQLLGHNKLADHLASFVARSFNSYIGSANMIDYLKFLGLQ 418 R+ +LA+ GR+ LPA A+ GG + +++R+ +LE K + LL G FR+RLL D + K+ +E VG + AE++RRRE + ELD+ AD + +VA+F V + AP+V AGA+ N P N FQ+ G R Y R+ + LFAVG +ASL+G G T+ + R ++ KD AGE + ++P++ TS+A GV++AVS+N+RYQV++G++E+R + LL +KLA F R+ N+++GS +DY KF+G+Q Sbjct: 104 REALFVLAQLGRKLESLPADMAAAVEGGRLPGEIVRRFADLE-KSPMFRWLLQFGGFRERLLADDLFLAKVAMECGVGIFTKTAAEYERRRENFVKELDFVIADVVMAIVADFMLVWLPAPTVSLQPALSVNAGAIAKFFHNCPDNAFQVALAG-RSYTFLQRLGAIMRNGAKLFAVGTSASLIGTGVTNAIIKAR---KTVNKD----------DAGEVE--------------------DIPIVSTSIAYGVYMAVSSNLRYQVLAGVIEQRMLEPLLHRHKLALSALCFAVRTGNTFLGSLLWVDYAKFIGIQ 384
BLAST of NO09G00530 vs. NCBI_GenBank
Match: AQK85583.1 (Protein RETICULATA-RELATED 4 chloroplastic [Zea mays]) HSP 1 Score: 159.8 bits (403), Expect = 1.800e-35 Identity = 110/316 (34.81%), Postives = 169/316 (53.48%), Query Frame = 0 Query: 111 RDVTELLARAGRQFTDLPASTQKALVGGSMTSGLLQRYLELEKKGGVVSSLLGMGIFRDRLLMDGYLMDKMVIEMAVGTAAQLLAEWDRRREKLMAELDYAFADTLTCLVANFAAVLISAPSV---------AGAVPPSGRNIPANMFQIVPPGARPYALTDRILSPFLKVPTLFAVGMAASLLGFGTTSLLTLIRNHLQSAKKDPLPSSLPAAVGAGEWDTGRWFGKQTVAVVEEEVAPAEMPLLKTSVAVGVFLAVSTNIRYQVISGLVEERGIAQLLGHNKLADHLASFVARSFNSYIGSANMIDYLKFLGLQ 418 R+ +LA+ GR+ LPA A+ GG + +++R+++LE V LL G F++RLL D + K+ IE VG + AE+++RRE + ELD+ AD + +VA+F V + AP+V +GA+ N P N FQ+ G Y+L R+ + LFAVG +ASL+G G T+ L R Q+A KD AGE + +P+L TSVA GV++AVS+N+RYQV++G++E+R + LL +KL A F R+ N+++GS IDY +++G+Q Sbjct: 107 REALFVLAQLGRKLESLPADLAAAVEGGRIPGEIVRRFVDLE-ASPVFRWLLQFGGFKERLLADDLFLTKVAIECGVGIFTKTAAEYEKRRENFVKELDFVIADVVMAIVADFMLVWLPAPTVSLQPPLAMNSGAIAKFFYNCPDNAFQVALSGT-SYSLLQRVGAILRNGAKLFAVGTSASLIGTGVTNALIKAR---QAASKD----------FAGEVE--------------------NIPILSTSVAYGVYMAVSSNLRYQVLAGVIEQRMLEPLLHQHKLVLSAACFAVRTGNTFLGSLLWIDYARWIGVQ 387
BLAST of NO09G00530 vs. NCBI_GenBank
Match: NP_001143763.1 (uncharacterized protein LOC100276525 [Zea mays] >ACG35080.1 hypothetical protein [Zea mays]) HSP 1 Score: 159.8 bits (403), Expect = 1.800e-35 Identity = 110/316 (34.81%), Postives = 169/316 (53.48%), Query Frame = 0 Query: 111 RDVTELLARAGRQFTDLPASTQKALVGGSMTSGLLQRYLELEKKGGVVSSLLGMGIFRDRLLMDGYLMDKMVIEMAVGTAAQLLAEWDRRREKLMAELDYAFADTLTCLVANFAAVLISAPSV---------AGAVPPSGRNIPANMFQIVPPGARPYALTDRILSPFLKVPTLFAVGMAASLLGFGTTSLLTLIRNHLQSAKKDPLPSSLPAAVGAGEWDTGRWFGKQTVAVVEEEVAPAEMPLLKTSVAVGVFLAVSTNIRYQVISGLVEERGIAQLLGHNKLADHLASFVARSFNSYIGSANMIDYLKFLGLQ 418 R+ +LA+ GR+ LPA A+ GG + +++R+++LE V LL G F++RLL D + K+ IE VG + AE+++RRE + ELD+ AD + +VA+F V + AP+V +GA+ N P N FQ+ G Y+L R+ + LFAVG +ASL+G G T+ L R Q+A KD AGE + +P+L TSVA GV++AVS+N+RYQV++G++E+R + LL +KL A F R+ N+++GS IDY +++G+Q Sbjct: 107 REALFVLAQLGRKLESLPADLAAAVEGGRIPGEIVRRFVDLE-ASPVFRWLLQFGGFKERLLADDLFLTKVAIECGVGIFTKTAAEYEKRRENFVKELDFVIADVVMAIVADFMLVWLPAPTVSLQPPLAMNSGAIAKFFYNCPDNAFQVALSGT-SYSLLQRVGAILRNGAKLFAVGTSASLIGTGVTNALIKAR---QAASKD----------FAGEVE--------------------NIPILSTSVAYGVYMAVSSNLRYQVLAGVIEQRMLEPLLHQHKLVLSAACFAVRTGNTFLGSLLWIDYARWIGVQ 387
BLAST of NO09G00530 vs. NCBI_GenBank
Match: BAJ85656.1 (predicted protein [Hordeum vulgare subsp. vulgare]) HSP 1 Score: 159.5 bits (402), Expect = 2.300e-35 Identity = 107/316 (33.86%), Postives = 167/316 (52.85%), Query Frame = 0 Query: 111 RDVTELLARAGRQFTDLPASTQKALVGGSMTSGLLQRYLELEKKGGVVSSLLGMGIFRDRLLMDGYLMDKMVIEMAVGTAAQLLAEWDRRREKLMAELDYAFADTLTCLVANFAAVLISAPSV---------AGAVPPSGRNIPANMFQIVPPGARPYALTDRILSPFLKVPTLFAVGMAASLLGFGTTSLLTLIRNHLQSAKKDPLPSSLPAAVGAGEWDTGRWFGKQTVAVVEEEVAPAEMPLLKTSVAVGVFLAVSTNIRYQVISGLVEERGIAQLLGHNKLADHLASFVARSFNSYIGSANMIDYLKFLGLQ 418 R+ +LA+ GR+ LPA A+ GG + +++R+ +LE K + LL G FR+RLL D + K+ +E VG + AE++RRRE + ELD+ AD + +VA+F V + AP+V AGA+ N P N FQ+ G+ Y R + LFAVG +ASL+G G T+ + R ++ KD AGE + ++P++ TS+A GV++AVS+N+RYQV++G++E+R + LL +KLA F R+ N+++GS +DY KF+G+Q Sbjct: 105 REALFVLAQLGRKLESLPADMAAAVEGGRLPGEIVRRFADLE-KSPMFRWLLQFGGFRERLLADDLFLAKVAMECGVGIFTKTAAEYERRRENFVKELDFVIADVVMAIVADFMLVWLPAPTVSLQPALAVNAGAIAKFFHNCPDNAFQVALAGS-SYTFLQRFGAIMRNGAKLFAVGTSASLIGTGVTNAIIKAR---KTVNKDE----------AGEVE--------------------DIPIVSTSIAYGVYMAVSSNLRYQVLAGVIEQRMLEPLLHRHKLALSALCFAVRTGNTFLGSLLWVDYAKFIGMQ 385
BLAST of NO09G00530 vs. NCBI_GenBank
Match: XP_001703430.1 (hypothetical protein CHLREDRAFT_188153 [Chlamydomonas reinhardtii] >PNW85236.1 hypothetical protein CHLRE_03g177350v5 [Chlamydomonas reinhardtii]) HSP 1 Score: 157.9 bits (398), Expect = 6.800e-35 Identity = 104/317 (32.81%), Postives = 160/317 (50.47%), Query Frame = 0 Query: 113 VTELLARAGRQFTDLPASTQKALVGGSMTSGLLQRYLELEKKGGVVSSLLGMGIFRDRLLMDGYLMDKMVIEMAVGTAAQLLAEWDRRREKLMAELDYAFADTLTCLVANFAAVLISAPSVA---------GAVPPSGRNIPANMFQIVPPGARPYALTDRILSPFLKVPTLFAVGMAASLLGFGTTSLLTLIRNHLQSAKKDPLPSSLPAAVGAGEWDTGRWFGKQTVAVVEEEVAPAEMP--LLKTSVAVGVFLAVSTNIRYQVISGLVEERGIAQLLGHNKLADHLASFVARSFNSYIGSANMIDYLKFLGLQQ 419 + LLA AGR PA + L+ +T +LQRY E + + G+ FR+RLL D K+ IE+ +G ++ AE+ +R+E E D+ FA+TL ++A+F + AP+++ A+ + P N FQ VPPG P++L+ R+ + L VG ASL+G G T+ L +R L DP +AP P +L TS A GV+++VS+N+RYQ+I+G+VEERGI L N HL SFVAR+ N+++GS +D+++ G+Q+ Sbjct: 103 IVALLAAAGRSVDSFPADFKYGLLANKVTPEILQRYFSFE-ANFIAKLVWGIDGFRERLLADPSFFVKLGIEIGIGVVMKITAEYTKRQENFAKEADFVFANTLMAIIADFMLTWLPAPTLSYRPRATASGNALVNFFASCPDNAFQKVPPGMEPFSLSQRLGAILRNGSKLLGVGFCASLIGVGVTNSLLFVRQQL-----DP------------------------------TMAPPNAPQNVLATSAAYGVYMSVSSNLRYQIIAGIVEERGIEVLFKGNHQLCHLLSFVARTGNTFLGSLLWVDFVRLCGMQK 383
BLAST of NO09G00530 vs. NCBI_GenBank
Match: XP_006438952.1 (protein RETICULATA-RELATED 4, chloroplastic isoform X1 [Citrus clementina] >XP_006482927.1 PREDICTED: protein RETICULATA-RELATED 4, chloroplastic-like [Citrus sinensis] >ESR52192.1 hypothetical protein CICLE_v10031842mg [Citrus clementina]) HSP 1 Score: 157.9 bits (398), Expect = 6.800e-35 Identity = 107/311 (34.41%), Postives = 164/311 (52.73%), Query Frame = 0 Query: 117 LARAGRQFTDLPASTQKALVGGSMTSGLLQRYLELEKKGGVVSSLLGMGIFRDRLLMDGYLMDKMVIEMAVGTAAQLLAEWDRRREKLMAELDYAFADTLTCLVANFAAVLISAPSVA---------GAVPPSGRNIPANMFQIVPPGARPYALTDRILSPFLKVPTLFAVGMAASLLGFGTTSLLTLIRNHLQSAKKDPLPSSLPAAVGAGEWDTGRWFGKQTVAVVEEEVAPAEMPLLKTSVAVGVFLAVSTNIRYQVISGLVEERGIAQLLGHNKLADHLASFVARSFNSYIGSANMIDYLKFLGLQQ 419 LA+AGR DLP A+ G + + +++RYLELE K V LL G FR+RLL D + K+ +E VG + AE +RRRE ELD+ FAD + ++A+F V + AP+++ G + N P N FQ+ G Y+L RI + LFAVG +ASL+G G T+ L R L ++ AGE + ++P++ TSVA GV++AVS+N+RYQV++G++E+R + LL NK+ F R+ N+++GS +DY +++G+Q+ Sbjct: 100 LAKAGRTLGDLPKDLAGAIEAGRVPAAIVKRYLELE-KSPVFRWLLNFGGFRERLLADDLFLAKVAMECGVGVFTKTAAELERRRENFSKELDFVFADVVMAIIADFMLVWLPAPTISLRPPLAMSTGPIAKFFFNCPDNAFQVAFTGT-SYSLIQRIGAIVRNGAKLFAVGTSASLVGVGITNALINARKALDTS-------------FAGEAE--------------------DVPIISTSVAYGVYMAVSSNLRYQVLAGVIEQRILEPLLHENKIILAAICFAFRTGNTFLGSLMWVDYARWVGIQK 375 The following BLAST results are available for this feature:
BLAST of NO09G00530 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO09G00530 ID=NO09G00530|Name=NO09G00530|organism=Nannochloropsis oceanica|type=gene|length=2348bpback to top protein sequence of NO09G00530.1 >NO09G00530.1-protein ID=NO09G00530.1-protein|Name=NO09G00530.1|organism=Nannochloropsis oceanica|type=polypeptide|length=449bpback to top protein sequence of NO09G00530.2 >NO09G00530.2-protein ID=NO09G00530.2-protein|Name=NO09G00530.2|organism=Nannochloropsis oceanica|type=polypeptide|length=419bpback to top Synonyms
Publications
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