NO09G00360, NO09G00360 (gene) Nannochloropsis oceanica

Overview
NameNO09G00360
Unique NameNO09G00360
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1092
Alignment locationchr9:171138..172229 +

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr9genomechr9:171138..172229 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO09G00360 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL119nonsL119Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR021ncniR021Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR127ngnoR127Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO09G00360.1NO09G00360.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|589414gene_4522Nannochloropsis oceanica (N. oceanica CCMP1779)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO09G00360.1NO09G00360.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO09G00360 ID=NO09G00360|Name=NO09G00360|organism=Nannochloropsis oceanica|type=gene|length=1092bp
ATGATGCGTAGCATCGCTCAGCAGTGGGCTACGTTGGACCCTGTTGGGTT
CCGCTTCTGGTACTCGAGGACGTACTCGAGGACGTTTGGCCAAGTCCTCG
AGATGGGCTATGTGGATTTTGCCAAGgtacatacaagcttgtcctcattt
cattaatttaaaagtgaagggaggagggagggaggaatgaagggaaaaat
tgagagacgaatgctggaaggggaggggggatagaaggggatggctttac
gtctttctttctcacatcatgcggcctcacaccctcaccaaaattaaaaa
gGAGACGTTTACAAGCATCATGGATGCTTTGAAGCTGATGGTCCGCCATG
CCATCTCCACTTTTACGGAGCTCGTATTGGAGGCGCATGAGCGGGGGGAG
GTTGAGTTTGTGCAGATGCTCATTATTTCCGCGGCAGACGAGTTGGAGGT
CAGCCATGCGGAGGTAAAGGCACTGAAGGATCCGATGCTTTTGCTTGATA
TTTTACAGGCGAAGCATCACCACAACCCGTTTGCGTGGGGGGAGAGCTGC
TTGCTGTTGGGTGCCATGACAATGGGGAACCTCGATgtaagcattcatta
catagcgaatttcttttgtgggatatggggaggagggacaggatcaatta
gagtctcgatcgtttgctggataaggatatcattcacctatcccaaaaat
tacattcgttgccttttcccttttccctcttccttcccccaactacccct
ccccctccctcatacccccagCTCATGGTTTTGCGTCTAAACCTGGACTC
GGTGGATGGAAAGGCGCATGCAAGAACGAGACCATATGCGCACCAGTACA
ACAAAGAGGGTGGTTGGTCGGTATTTGGGCTTGTGAGCATTGGCATTGGT
GTCCAATATGAGCACTTTAATGTGCTGGCCTTGGGCGACTTTCTGATGCA
ACACGTGGTGCAGGCGTCGCTGACGTCGGAGCGGAAGAGGGAACAGGAGC
AGGAGCAGCGACAGCAAATAATATCTTTGCCGCGGTGGGAGCAAGAGAAG
AGAAAGGAGCACAGGGAGGGAAGAGATGCTGCCCTCCCCTAA
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protein sequence of NO09G00360.1

>NO09G00360.1-protein ID=NO09G00360.1-protein|Name=NO09G00360.1|organism=Nannochloropsis oceanica|type=polypeptide|length=244bp
MMRSIAQQWATLDPVGFRFWYSRTYSRTFGQVLEMGYVDFAKETFTSIMD
ALKLMVRHAISTFTELVLEAHERGEVEFVQMLIISAADELEVSHAEVKAL
KDPMLLLDILQAKHHHNPFAWGESCLLLGAMTMGNLDLMVLRLNLDSVDG
KAHARTRPYAHQYNKEGGWSVFGLVSIGIGVQYEHFNVLALGDFLMQHVV
QASLTSERKREQEQEQRQQIISLPRWEQEKRKEHREGRDAALP*
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Synonyms
Publications