NO09G00170, NO09G00170 (gene) Nannochloropsis oceanica

Overview
NameNO09G00170
Unique NameNO09G00170
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1778
Alignment locationchr9:93899..95676 +

Link to JBrowse

Properties
Property NameValue
DescriptionE3 ubiquitin-protein ligase
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr9genomechr9:93899..95676 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0004842ubiquitin-protein transferase activity
GO:0016874ligase activity
GO:0016740transferase activity
GO:0004842ubiquitin-protein transferase activity
Vocabulary: INTERPRO
TermDefinition
IPR035983Hect_E3_ubiquitin_ligase
IPR000569HECT
Vocabulary: Biological Process
TermDefinition
GO:0016567protein ubiquitination
Homology
BLAST of NO09G00170 vs. NCBI_GenBank
Match: GBG33319.1 (E3 ubiquitin-protein ligase TRIP12 [Aurantiochytrium sp. FCC1311])

HSP 1 Score: 144.1 bits (362), Expect = 9.800e-31
Identity = 133/472 (28.18%), Postives = 169/472 (35.81%), Query Frame = 0
Query:   52 LVVAFEGETGHGTGPTQEFYSLVCREVTRKGLGVWRGDEV-----------------------------------------------------GAVKEEAEGGG--------------------------------------RGSKNCKAPAPTS------SFLSSSFSTTIILSTFRFLGRLIGKAFQENRLLSLPLSLPLCKLLVGHPLILADVGLVDPQLGRCLAEIESMVVRADAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRLSEYLEALSLDFTLPGYP*ASRPAVCG--XXXXXXXXWTEERIGNSLVCKHGYHRSAPQIQWLVRVLASLEREERKKFLMFVCGTPRLPIGGFAALRPLLTV--------------------VYLKLPAYSSEEVLREKLKQAMTLGQEHFALD 405
            L V F GE GHG GPT EFYSLVCRE+ R  L +WR  E                                                       A+ + A GGG                                      R +   +A  P+       S L +  S   +L+ F F+GR IGKA Q+ RLL LPLS+PLCKLL+G  L L+D GLVD  LG+    ++ +   ADA                                                                              R     E +S  F +      S   +            W  E I  ++VCKHGY   A QI+ LV VL+ L+  +R+ F+ F+ G+PRLP+GGF  LRP LTV                    VYLKLP YSS EVL+ +L QA+  GQ HFALD
Sbjct: 2331 LAVEFTGEIGHGLGPTLEFYSLVCRELHRADLKIWRQPETLEHEGDTDSSSGFVFNPLGLWPSTLPPAGSIPMXXXXXXXXXXXXXXXXXXXXXAMLDAAGGGGHERATRLGLGVPAQGLDSSGASEGFVPAAMRAGLRREFRSASRRQAALPSEVRLDEPSILEAEHSRERVLTIFTFVGRFIGKALQDKRLLDLPLSIPLCKLLIGESLKLSDAGLVDETLGKSFQYLQDL---ADAHAQLSARAGEEDADAELCELEDTICGMCIDFTVPGTNGEELVVGGASKSVTGANLQEYLDLVCKRILHDDVAEQVRCLR-----EGISAFFPVEALQVFSPHELQSLLSDGDDGANWDAEVIMANIVCKHGYDARARQIRDLVHVLSELDGSDRRLFMQFLTGSPRLPVGGFGELRPRLTVVRKNVADDPDGILPSCSTCQVYLKLPPYSSREVLKRRLLQAVREGQGHFALD 2794          
BLAST of NO09G00170 vs. NCBI_GenBank
Match: KZV58123.1 (hypothetical protein F511_37571 [Dorcoceras hygrometricum])

HSP 1 Score: 133.7 bits (335), Expect = 1.300e-27
Identity = 108/376 (28.72%), Postives = 152/376 (40.43%), Query Frame = 0
Query:   52 LVVAFEGETGHGTGPTQEFYSLVCREVTRKGLGVWRGDEVGAVKE-EAEGGG-RGSKNCKAPAPTSSFLSSSFSTTI--ILSTFRFLGRLIGKAFQENRLLSLPLSLPLCKLLVGHPLILADVGLVDPQLGRCLAEIESMVVRADAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRLSEYLEALSLDFTLPGYP*ASRPAVCGXXXXXXXXWTEERIGNSLVCKHGYHRSAPQIQWLVRVLASLEREERKKFLMFVCGTPRLPIGGFAALRPLLTVV--------------------YLKLPAYSSEEVLREKLKQAMTLGQEHFAL 404
            L V +  E G G GPT EFY+LVC E  R GLG+WR D V  +   EAE  G   S     P P S  LS   ST    ++  FR LG+++ KA Q+ R+L LP S    KL++G  L + D+  +DP LG+ L E ++ V R                                                                                   S + + L++              +CG        W  + + + +   HGY  S+P +  L+ V+   + E+++ FL FV G PRLP GGFA+L P LT+V                    YLKLP YS++E+++EKL  A+T GQ  F L
Sbjct: 1159 LEVEYTEEVGTGLGPTLEFYTLVCHEFQRNGLGLWREDPVNCINAVEAENPGFLMSPVGLFPRPWSPSLSIESSTPFSEVIKKFRLLGQIVAKALQDGRVLDLPFSHAFYKLVLGKELTVHDIRSIDPSLGKALLEFQATVERKRYLKSLSEEESQDPGLCLQSTKIEDLCLDFTLPGYPDYDLVLAPDSKMVNLGNIEEYITLIVDATTKSGISRQVEAFK----SGFDQVLNVQHLKIFTEEELERLLCG----EHVLWNSDELLDHIKFDHGYTISSPPVVNLIEVMREFDSEQQRAFLQFVTGAPRLPSGGFASLNPKLTIVRKHCGKWIDADLPSVMTCANYLKLPPYSTKEIMKEKLLYAITEGQGSFHL 1526          
BLAST of NO09G00170 vs. NCBI_GenBank
Match: XP_011094716.1 (E3 ubiquitin-protein ligase UPL4 isoform X1 [Sesamum indicum] >XP_011094717.1 E3 ubiquitin-protein ligase UPL4 isoform X1 [Sesamum indicum] >XP_020553305.1 E3 ubiquitin-protein ligase UPL4 isoform X1 [Sesamum indicum] >XP_020553306.1 E3 ubiquitin-protein ligase UPL4 isoform X1 [Sesamum indicum])

HSP 1 Score: 129.8 bits (325), Expect = 1.900e-26
Identity = 106/376 (28.19%), Postives = 149/376 (39.63%), Query Frame = 0
Query:   54 VAFEGETGHGTGPTQEFYSLVCREVTRKGLGVWRGDEV----GAVKEEAEGGGRGSKNCKAPAPTSSFLSSSFSTTI--ILSTFRFLGRLIGKAFQENRLLSLPLSLPLCKLLVGHPLILADVGLVDPQLGRCLAEIESMVVRADAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRLSEYLEALSLDFTLPGYP*ASRPAVCGXXXXXXXXWTEERIGNSLVCKHGYHRSAPQIQWLVRVLASLEREERKKFLMFVCGTPRLPIGGFAALRPLLTVV--------------------YLKLPAYSSEEVLREKLKQAMTLGQEHFAL 404
            V ++ E G G GPT EFY+LVC E  R GLG+WR D V     AV E    G   S     P P S  LS+S S+    ++  F  LG ++ KA Q+ R+L LP S  L KL++G  L L D+   DP  GR L E +++V R +                                                                               ++  +       F +      +   +          W  E + + +   HGY  S+P I  L+ ++   + ++++ FL FV G PRLP GG A+L P LT+V                    YLKLP YSS+EV++EKL  A+T GQ  F L
Sbjct: 1183 VEYDEEVGTGLGPTLEFYTLVCHEFQRSGLGMWRDDTVPLQCTAVLETENTGFLVSPFGLFPRPWSPSLSASSSSVYSDVIEKFSLLGYIVAKALQDGRVLDLPFSKALYKLILGKELSLYDIQSFDPASGRALLEFQAVVERKE--------YLRSVCKEESADLDVCLRNTKIEDLCLDFTLPGYPDYVLVPETDSRMVNLYNLDEYITLIVDATTKSGIARQVEAFKSGFDQVFPIKHLKVFTEEELERLLCGEHVLWNSEDLLDHIKFDHGYTISSPPIVNLLEIMQEFDLKQQRAFLQFVTGAPRLPTGGLASLNPKLTIVRKHCSKGIDADLPSVMTCANYLKLPPYSSKEVMKEKLLYAVTEGQGSFHL 1550          
BLAST of NO09G00170 vs. NCBI_GenBank
Match: XP_020553308.1 (E3 ubiquitin-protein ligase UPL4 isoform X3 [Sesamum indicum])

HSP 1 Score: 129.8 bits (325), Expect = 1.900e-26
Identity = 106/376 (28.19%), Postives = 149/376 (39.63%), Query Frame = 0
Query:   54 VAFEGETGHGTGPTQEFYSLVCREVTRKGLGVWRGDEV----GAVKEEAEGGGRGSKNCKAPAPTSSFLSSSFSTTI--ILSTFRFLGRLIGKAFQENRLLSLPLSLPLCKLLVGHPLILADVGLVDPQLGRCLAEIESMVVRADAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRLSEYLEALSLDFTLPGYP*ASRPAVCGXXXXXXXXWTEERIGNSLVCKHGYHRSAPQIQWLVRVLASLEREERKKFLMFVCGTPRLPIGGFAALRPLLTVV--------------------YLKLPAYSSEEVLREKLKQAMTLGQEHFAL 404
            V ++ E G G GPT EFY+LVC E  R GLG+WR D V     AV E    G   S     P P S  LS+S S+    ++  F  LG ++ KA Q+ R+L LP S  L KL++G  L L D+   DP  GR L E +++V R +                                                                               ++  +       F +      +   +          W  E + + +   HGY  S+P I  L+ ++   + ++++ FL FV G PRLP GG A+L P LT+V                    YLKLP YSS+EV++EKL  A+T GQ  F L
Sbjct:  759 VEYDEEVGTGLGPTLEFYTLVCHEFQRSGLGMWRDDTVPLQCTAVLETENTGFLVSPFGLFPRPWSPSLSASSSSVYSDVIEKFSLLGYIVAKALQDGRVLDLPFSKALYKLILGKELSLYDIQSFDPASGRALLEFQAVVERKE--------YLRSVCKEESADLDVCLRNTKIEDLCLDFTLPGYPDYVLVPETDSRMVNLYNLDEYITLIVDATTKSGIARQVEAFKSGFDQVFPIKHLKVFTEEELERLLCGEHVLWNSEDLLDHIKFDHGYTISSPPIVNLLEIMQEFDLKQQRAFLQFVTGAPRLPTGGLASLNPKLTIVRKHCSKGIDADLPSVMTCANYLKLPPYSSKEVMKEKLLYAVTEGQGSFHL 1126          
BLAST of NO09G00170 vs. NCBI_GenBank
Match: XP_003541402.1 (PREDICTED: E3 ubiquitin-protein ligase UPL4-like [Glycine max] >XP_006594113.1 PREDICTED: E3 ubiquitin-protein ligase UPL4-like [Glycine max] >XP_006594114.1 PREDICTED: E3 ubiquitin-protein ligase UPL4-like [Glycine max] >KRH19809.1 hypothetical protein GLYMA_13G136900 [Glycine max] >KRH19810.1 hypothetical protein GLYMA_13G136900 [Glycine max])

HSP 1 Score: 129.0 bits (323), Expect = 3.300e-26
Identity = 106/377 (28.12%), Postives = 148/377 (39.26%), Query Frame = 0
Query:   52 LVVAFEGETGHGTGPTQEFYSLVCREVTRKGLGVWRGDEVG---AVKEEAEGGGRGSKNCKAPAPTSSF--LSSSFSTTIILSTFRFLGRLIGKAFQENRLLSLPLSLPLCKLLVGHPLILADVGLVDPQLGRCLAEIESMVVRADAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRLSEYLEALSLDFTLPGYP*ASRPAVCGXXXXXXXXWTEERIGNSLVCKHGYHRSAPQIQWLVRVLASLEREERKKFLMFVCGTPRLPIGGFAALRPLLTVV--------------------YLKLPAYSSEEVLREKLKQAMTLGQEHFAL 404
            L V ++ E G G GPT EFY+LVC+E  + GLG+WR D          EAE  G  S     P P SS    S     + ++  F  LG+++ KA Q+ R+L L  S    KL++G  L L D+   DP LG+ L E +++V+R                                                                                   S + +  S+D             +CG        W    +G+ +   HGY  S+P I  L+ ++   + E+R+ FL FV G PRLP GG A+L P LT+V                    YLKLP YSS+E ++EKL  A+T GQ  F L
Sbjct: 1188 LEVEYDEEVGTGLGPTLEFYTLVCQEFQKSGLGMWREDASSFTLKTNMEAEDIGTHSFYGLFPRPWSSMQDTSGGIQFSEVIKNFFLLGQVVAKALQDGRILDLHFSKAFYKLILGKELSLYDIQSFDPGLGKVLQEFQALVIRKKFVESVSGGNSELQHGLSFRDTRIEDLCLDFTLPGFPDIVLASGTDHTMVNTRNLEDYVSLIVDATVRSGVSRQVEAFK---SGFNQVFSIDHLRIFNEEELERMLCG----ECDSWAVNELGDHIKFDHGYTASSPPIINLLEIVREFDNEQRRAFLQFVTGAPRLPPGGLASLNPKLTIVRKHCSNRADTDLPSVMTCANYLKLPPYSSKERMKEKLLYAITEGQGSFHL 1557          
BLAST of NO09G00170 vs. NCBI_GenBank
Match: KHN48327.1 (E3 ubiquitin-protein ligase UPL4 [Glycine soja])

HSP 1 Score: 127.9 bits (320), Expect = 7.300e-26
Identity = 106/377 (28.12%), Postives = 147/377 (38.99%), Query Frame = 0
Query:   52 LVVAFEGETGHGTGPTQEFYSLVCREVTRKGLGVWRGDEVG---AVKEEAEGGGRGSKNCKAPAPTSSF--LSSSFSTTIILSTFRFLGRLIGKAFQENRLLSLPLSLPLCKLLVGHPLILADVGLVDPQLGRCLAEIESMVVRADAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRLSEYLEALSLDFTLPGYP*ASRPAVCGXXXXXXXXWTEERIGNSLVCKHGYHRSAPQIQWLVRVLASLEREERKKFLMFVCGTPRLPIGGFAALRPLLTVV--------------------YLKLPAYSSEEVLREKLKQAMTLGQEHFAL 404
            L V ++ E G G GPT EFY+LVC+E  + GLG+WR D          EAE  G  S     P P SS    S     + +   F  LG+++ KA Q+ R+L L  S    KL++G  L L D+   DP LG+ L E +++V+R                                                                                   S + +  S+D             +CG        W    +G+ +   HGY  S+P I  L+ ++   + E+R+ FL FV G PRLP GG A+L P LT+V                    YLKLP YSS+E ++EKL  A+T GQ  F L
Sbjct: 1048 LEVEYDEEVGTGLGPTLEFYTLVCQEFQKSGLGMWREDASSFTLKTNMEAEDIGTHSFYGLFPRPWSSMQDTSGGIQFSEVTKNFFLLGQVVAKALQDGRILDLHFSKAFYKLILGKELSLYDIQSFDPGLGKVLQEFQALVIRKKFVESVSGGNSELQHGLSFRDTRIEDLCLDFTLPGFPDIVLASGTDHTMVNTRNLEDYVSLIVDATVRSGVSRQVEAFK---SGFNQVFSIDHLRIFNEEELERMLCG----ECDSWAVNELGDHIKFDHGYTASSPPIINLLEIVREFDNEQRRAFLQFVTGAPRLPPGGLASLNPKLTIVRKHCSNRADTDLPSVMTCANYLKLPPYSSKERMKEKLLYAITEGQGSFHL 1417          
BLAST of NO09G00170 vs. NCBI_GenBank
Match: XP_017414781.1 (PREDICTED: E3 ubiquitin-protein ligase UPL4 [Vigna angularis] >XP_017414782.1 PREDICTED: E3 ubiquitin-protein ligase UPL4 [Vigna angularis] >XP_017414783.1 PREDICTED: E3 ubiquitin-protein ligase UPL4 [Vigna angularis] >BAT95841.1 hypothetical protein VIGAN_08265600 [Vigna angularis var. angularis])

HSP 1 Score: 127.1 bits (318), Expect = 1.200e-25
Identity = 103/377 (27.32%), Postives = 149/377 (39.52%), Query Frame = 0
Query:   52 LVVAFEGETGHGTGPTQEFYSLVCREVTRKGLGVWRGDEVGAVKE---EAEGGGRGSKNCKAPAPTSSF--LSSSFSTTIILSTFRFLGRLIGKAFQENRLLSLPLSLPLCKLLVGHPLILADVGLVDPQLGRCLAEIESMVVRADAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRLSEYLEALSLDFTLPGYP*ASRPAVCGXXXXXXXXWTEERIGNSLVCKHGYHRSAPQIQWLVRVLASLEREERKKFLMFVCGTPRLPIGGFAALRPLLTVV--------------------YLKLPAYSSEEVLREKLKQAMTLGQEHFAL 404
            L V ++ E G G GPT EFY+LVC E  + GLG+WR D    + +   +AE  G  S     P P S+    S     T +   F  LG+++ KA Q+ R+L L  S    KL++G  L L D+   DP LGR L E +++V+R                                                                                 ++  +    +  F++      +   V          W    +G+++   HGY  S+P I  L+ ++   + E+R+ FL FV G PRLP GG A+L P LT+V                    YLKLP YSS+E ++EKL  A+T GQ  F L
Sbjct: 1186 LEVEYDEEVGTGLGPTLEFYTLVCHEFQKSGLGMWREDVSSFILKSNLQAEEMGIHSFYGLFPRPWSTMQDTSGDIQFTDVAKKFFLLGQVVAKALQDGRILDLHFSKAFYKLILGKELSLYDILSFDPGLGRVLQEFQALVIRKS-------IMESVNGGNSELQYGKSFRDTSIEDLCLDFTLPGYPDIVLASGTDHSMVNMRNLEDYVSCIVDATVRSGISRQVEAFKSGFNQVFSIEHLQIFNEEEVERMLCGEYDSWAINELGDNIKFDHGYTASSPPIVNLLEIVREFDHEQRRAFLQFVTGAPRLPPGGLASLNPKLTIVRKHCNNRADTDLPSVMTCANYLKLPPYSSKERMKEKLLYAITEGQGSFHL 1555          
BLAST of NO09G00170 vs. NCBI_GenBank
Match: KNA23495.1 (hypothetical protein SOVF_023000 [Spinacia oleracea])

HSP 1 Score: 126.7 bits (317), Expect = 1.600e-25
Identity = 104/375 (27.73%), Postives = 150/375 (40.00%), Query Frame = 0
Query:   54 VAFEGETGHGTGPTQEFYSLVCREVTRKGLGVWRGDEVGAVKE-EAEGGGRGSKNCKAP---APTSSFLSSSFSTTIILSTFRFLGRLIGKAFQENRLLSLPLSLPLCKLLVGHPLILADVGLVDPQLGRCLAEIESMVVRADAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXR-LSEYLEALSLDFTLPGYP*ASRPAVCGXXXXXXXXWTEERIGNSLVCKHGYHRSAPQIQWLVRVLASLEREERKKFLMFVCGTPRLPIGGFAALRPLLTVV--------------------YLKLPAYSSEEVLREKLKQAMTLGQEHFAL 404
            V +  E G G GPT EFY+LV  E  + GLG+WRGD + A      +G    S +   P   +PTSS + +    + ++  F  LG+ +GK+ Q+ R+L +P S+   KLL+G  L L D+ L +P+LGR L E +++V R                                                                                   L++ +    L              +CG        W    + + +   HGY   +P I  L+ +++ +  E+R+ FL FV G PRLP GG A+L P LTVV                    YLKLP YSS+E +REKL  A+T GQ  F L
Sbjct: 1234 VEYSEEVGTGLGPTLEFYTLVSHEFQKTGLGMWRGDYISATNSCSKQGSSMVSTSGLFPRPWSPTSSNI-NGIEFSDVIKKFVLLGQFVGKSLQDGRVLDIPFSIAFYKLLLGKELSLCDIPLFEPELGRSLLEFKALVSRRKCESASGDNMVHMDGDSLRFRLTKIEDLCLDFTLPGYPDYVLSSGMDDEMVNIDNLEEYISFVLDATIQTGVRRQVDAFKSGLNQVISDKHLQLFTED---ELERLLCG----ERDSWLSSDLFDHIKFDHGYTAGSPPIINLLEIISEITYEQRRAFLQFVTGAPRLPPGGLASLNPKLTVVRKHSSNSPDADLPSVMTCANYLKLPPYSSKEKMREKLLYAITEGQGSFHL 1600          
BLAST of NO09G00170 vs. NCBI_GenBank
Match: XP_021847392.1 (E3 ubiquitin-protein ligase UPL4 isoform X2 [Spinacia oleracea])

HSP 1 Score: 126.7 bits (317), Expect = 1.600e-25
Identity = 104/375 (27.73%), Postives = 150/375 (40.00%), Query Frame = 0
Query:   54 VAFEGETGHGTGPTQEFYSLVCREVTRKGLGVWRGDEVGAVKE-EAEGGGRGSKNCKAP---APTSSFLSSSFSTTIILSTFRFLGRLIGKAFQENRLLSLPLSLPLCKLLVGHPLILADVGLVDPQLGRCLAEIESMVVRADAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXR-LSEYLEALSLDFTLPGYP*ASRPAVCGXXXXXXXXWTEERIGNSLVCKHGYHRSAPQIQWLVRVLASLEREERKKFLMFVCGTPRLPIGGFAALRPLLTVV--------------------YLKLPAYSSEEVLREKLKQAMTLGQEHFAL 404
            V +  E G G GPT EFY+LV  E  + GLG+WRGD + A      +G    S +   P   +PTSS + +    + ++  F  LG+ +GK+ Q+ R+L +P S+   KLL+G  L L D+ L +P+LGR L E +++V R                                                                                   L++ +    L              +CG        W    + + +   HGY   +P I  L+ +++ +  E+R+ FL FV G PRLP GG A+L P LTVV                    YLKLP YSS+E +REKL  A+T GQ  F L
Sbjct:  932 VEYSEEVGTGLGPTLEFYTLVSHEFQKTGLGMWRGDYISATNSCSKQGSSMVSTSGLFPRPWSPTSSNI-NGIEFSDVIKKFVLLGQFVGKSLQDGRVLDIPFSIAFYKLLLGKELSLCDIPLFEPELGRSLLEFKALVSRRKCESASGDNMVHMDGDSLRFRLTKIEDLCLDFTLPGYPDYVLSSGMDDEMVNIDNLEEYISFVLDATIQTGVRRQVDAFKSGLNQVISDKHLQLFTED---ELERLLCG----ERDSWLSSDLFDHIKFDHGYTAGSPPIINLLEIISEITYEQRRAFLQFVTGAPRLPPGGLASLNPKLTVVRKHSSNSPDADLPSVMTCANYLKLPPYSSKEKMREKLLYAITEGQGSFHL 1298          
BLAST of NO09G00170 vs. NCBI_GenBank
Match: XP_021847391.1 (E3 ubiquitin-protein ligase UPL4 isoform X1 [Spinacia oleracea])

HSP 1 Score: 126.7 bits (317), Expect = 1.600e-25
Identity = 104/375 (27.73%), Postives = 150/375 (40.00%), Query Frame = 0
Query:   54 VAFEGETGHGTGPTQEFYSLVCREVTRKGLGVWRGDEVGAVKE-EAEGGGRGSKNCKAP---APTSSFLSSSFSTTIILSTFRFLGRLIGKAFQENRLLSLPLSLPLCKLLVGHPLILADVGLVDPQLGRCLAEIESMVVRADAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXR-LSEYLEALSLDFTLPGYP*ASRPAVCGXXXXXXXXWTEERIGNSLVCKHGYHRSAPQIQWLVRVLASLEREERKKFLMFVCGTPRLPIGGFAALRPLLTVV--------------------YLKLPAYSSEEVLREKLKQAMTLGQEHFAL 404
            V +  E G G GPT EFY+LV  E  + GLG+WRGD + A      +G    S +   P   +PTSS + +    + ++  F  LG+ +GK+ Q+ R+L +P S+   KLL+G  L L D+ L +P+LGR L E +++V R                                                                                   L++ +    L              +CG        W    + + +   HGY   +P I  L+ +++ +  E+R+ FL FV G PRLP GG A+L P LTVV                    YLKLP YSS+E +REKL  A+T GQ  F L
Sbjct: 1233 VEYSEEVGTGLGPTLEFYTLVSHEFQKTGLGMWRGDYISATNSCSKQGSSMVSTSGLFPRPWSPTSSNI-NGIEFSDVIKKFVLLGQFVGKSLQDGRVLDIPFSIAFYKLLLGKELSLCDIPLFEPELGRSLLEFKALVSRRKCESASGDNMVHMDGDSLRFRLTKIEDLCLDFTLPGYPDYVLSSGMDDEMVNIDNLEEYISFVLDATIQTGVRRQVDAFKSGLNQVISDKHLQLFTED---ELERLLCG----ERDSWLSSDLFDHIKFDHGYTAGSPPIINLLEIISEITYEQRRAFLQFVTGAPRLPPGGLASLNPKLTVVRKHSSNSPDADLPSVMTCANYLKLPPYSSKEKMREKLLYAITEGQGSFHL 1599          
The following BLAST results are available for this feature:
BLAST of NO09G00170 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
GBG33319.19.800e-3128.18E3 ubiquitin-protein ligase TRIP12 [Aurantiochytri... [more]
KZV58123.11.300e-2728.72hypothetical protein F511_37571 [Dorcoceras hygrom... [more]
XP_011094716.11.900e-2628.19E3 ubiquitin-protein ligase UPL4 isoform X1 [Sesam... [more]
XP_020553308.11.900e-2628.19E3 ubiquitin-protein ligase UPL4 isoform X3 [Sesam... [more]
XP_003541402.13.300e-2628.12PREDICTED: E3 ubiquitin-protein ligase UPL4-like [... [more]
KHN48327.17.300e-2628.12E3 ubiquitin-protein ligase UPL4 [Glycine soja][more]
XP_017414781.11.200e-2527.32PREDICTED: E3 ubiquitin-protein ligase UPL4 [Vigna... [more]
KNA23495.11.600e-2527.73hypothetical protein SOVF_023000 [Spinacia olerace... [more]
XP_021847392.11.600e-2527.73E3 ubiquitin-protein ligase UPL4 isoform X2 [Spina... [more]
XP_021847391.11.600e-2527.73E3 ubiquitin-protein ligase UPL4 isoform X1 [Spina... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniR021ncniR021Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR127ngnoR127Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO09G00170.1NO09G00170.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|630393gene_4543Nannochloropsis oceanica (N. oceanica CCMP1779)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO09G00170.1NO09G00170.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO09G00170 ID=NO09G00170|Name=NO09G00170|organism=Nannochloropsis oceanica|type=gene|length=1778bp
ATGGAAGAAGAGGAGGAGGGGGAGGAATATGGTGCGGAATCTGCCTTTGC
GAGAGCTCGGCACGCGTATATGCTGATGGGAGGTGGGGGCGGGGGAGGGG
GAGGGGGAGGAAGGGAAGGAGGAGGGGAAGGAGGAAGCTTCCGGGAGGAT
GAGCTGGTGGTGGCGTTTGAGGGGGAGACAGGGCATGGGACGGGACCGAC
GCAGGAGTTTTATTCGTTGGTGTGTAGGGAAGTGACGAGGAAGGGCCTGG
GTGTGTGGAGGGGGGATGAGGTGGGGGCGGTGAAGGAGGAGGCGGAGGGG
GGGGGTAGGGGgtagggagggaggacggaagagggggcagggaggagata
gaaagaagcgaaggaagagggaaaaggagacgggagatttctcatggaag
gaagaggggaaggagcaaggacagggagggaggaaggagggaaaagagga
ggaagagaaggagggggaggagccactctacattcctgtgggtgtagggg
gtctgttccctcgtgtccttcctccctctcccccttcccatcccctcccc
cctcttccatcgaagcaggcacaacggaatagcaatagATCCAAGAATTG
CAAAGCCCCCGCCCCCACTTCCTCCTTCCTGTCCTCCTCTTTCTCCACCA
CCATCATCCTCTCCACCTTCCGTTTCCTCGGCCGGCTGATTGGGAAAGCC
TTCCAAGAGAACCGGCTGCTCTCCCTCCCCCTCTCCCTCCCTCTCTGTAA
GCTCTTGGTGGGGCATCCATTAATTCTGGCAGATGTCGGGCTTGTGGACC
CCCAACTCGGTCGCTGCTTGGCCGAGATCGAGTCCATGGTGGTACGTGCG
GATGCGGAGGAGGAGGCGGAGGAGGAGAATGAGAAGGAGAAGATGGAGGA
GGAATGGAAAGATGAAGGGCTGCTGCTGAGCACGCCTACTGGCTCTACGT
CCTCCTCTTTCTCGTCTGTTCGTTCTATCATCACCACCACCACCGCCACC
ACCAAGAAAAAGAAGCAACCACACCTTCAGGAGCAACAGCAGCCGCAACC
CCCACATCAACCCCGACAGCAGCAGCAGCAGCACCGTCACCGCCTTTCCG
AGTACCTTGAGGCCCTCTCCCTCGACTTCACCCTTCCAGGCTACCCATGg
tatgagctgcgggagggagggaaggaggagacggtcgacagcacgaacgt
acgggtgtacctcaatctggtcacgcggcatttcctaattgagagcattc
agccctccctcaaggcactgaaagagggattgcttgacgtcctccgcccc
ccccttacccggtctctcgccctcttctcccccatagAGCTTCGCGCCCT
GCTGTGTGCGGAGGGGGGGAGGAGGAAGAGGAGGAGTGGACCGAGGAGCG
GATCGGGAATAGCCTGGTGTGTAAGCACGGGTATCACCGATCAGCCCCTC
AGATACAGTGGCTGGTCAGGGTGTTGGCATCGTTGGAGAGGGAAGAGAGG
AAGAAGTTTTTGATGTTTGTGTGTGGCACACCCCGTTTGCCTATTGGTGG
CTTTGCGGCCTTGAGGCCGTTACTGACGGTGgtgagaaaagaggtcccct
cgacgggtgggagggggaaaagagggaggggggggcgttggcagcagact
tgtacttaccgagctgtagcacgtgtcagGTGTACTTAAAGCTGCCTGCA
TACAGCTCCGAGGAGGTGCTGCGGGAGAAGTTGAAGCAGGCGATGACGTT
GGGACAGGAGCACTTTGCCTTAGATTAG
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protein sequence of NO09G00170.1

>NO09G00170.1-protein ID=NO09G00170.1-protein|Name=NO09G00170.1|organism=Nannochloropsis oceanica|type=polypeptide|length=405bp
MEEEEEGEEYGAESAFARARHAYMLMGGGGGGGGGGGREGGGEGGSFRED
ELVVAFEGETGHGTGPTQEFYSLVCREVTRKGLGVWRGDEVGAVKEEAEG
GGRGSKNCKAPAPTSSFLSSSFSTTIILSTFRFLGRLIGKAFQENRLLSL
PLSLPLCKLLVGHPLILADVGLVDPQLGRCLAEIESMVVRADAEEEAEEE
NEKEKMEEEWKDEGLLLSTPTGSTSSSFSSVRSIITTTTATTKKKKQPHL
QEQQQPQPPHQPRQQQQQHRHRLSEYLEALSLDFTLPGYP*ASRPAVCGG
GEEEEEEWTEERIGNSLVCKHGYHRSAPQIQWLVRVLASLEREERKKFLM
FVCGTPRLPIGGFAALRPLLTVVYLKLPAYSSEEVLREKLKQAMTLGQEH
FALD*
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Synonyms
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