NO09G00160, NO09G00160 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO09G00160 vs. NCBI_GenBank
Match: GBG33319.1 (E3 ubiquitin-protein ligase TRIP12 [Aurantiochytrium sp. FCC1311]) HSP 1 Score: 104.4 bits (259), Expect = 5.500e-18 Identity = 72/220 (32.73%), Postives = 105/220 (47.73%), Query Frame = 0 Query: 23 LEDLNLQLTIGHGPLRLGEVTPLLLSLLTSSSPSPEAVLLAIRGLNTILDINPRAADLFVKRTYQQXXXXXXXXXXXXXXXXXXXXXXXXXXXXALCEKLLTIEDIEIAEQCLKCLSLVAGRE----GGQARAVLEAGGLTAATLYFDFFPLHLQRLALRTCLALC--ACVGGKEGGR-GDGEKVQAVVPFWVRCLGL--DDQLIRVQACQCLCTVIEKF 234 L +++ LT+G +R + P LL ++ +PEAVLLA R LN ILD+ PR + V LC+KLL+ +D E+AEQCL CL +A + Q ++L AGG+ A T +FDFFP H+Q AL +C C K+ D V V+P +CL DDQ++R+ C L T++E++ Sbjct: 20 LREVSSVLTMGQTDMRTQPLVPCLLRIVQQCQRTPEAVLLAARSLNMILDMEPRMTRIVVNE----------------------------QGLPILCDKLLSFQDFEVAEQCLNCLHFIAQNDHRDTSAQLLSLLRAGGMHACTAFFDFFPKHMQIKALTIVCKICKHVCDDTKDRAHVSDASYVLQVLPALHKCLSSADDDQVLRL-VCTALWTLVERY 210
BLAST of NO09G00160 vs. NCBI_GenBank
Match: CBJ32692.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 89.0 bits (219), Expect = 2.400e-13 Identity = 74/205 (36.10%), Postives = 97/205 (47.32%), Query Frame = 0 Query: 2 SLSALLAGIANPPSPAHQLSYLEDLNLQLTIGHG---PLRLGEVTPLLLSLLTSSSPSPEAVLLAIRGLNTILDINPRAADLFVKRTYQQXXXXXXXXXXXXXXXXXXXXXXXXXXXXALCEKLLTIEDIEIAEQCLKCLSLVAGREGGQARAVLEAGGLTAATLYFDFFPLHLQRLALRTCLALCACVGGKEGGRGDGEKVQAV 204 S+ LL + P Q++ L +LN LT+ G R+G V L+ LL S + E VLLAIR L T +DI PRAA V +C++LL I+D+++AE CLKCL L++ RAVLEAGG A +FDFFPL LQ+ AL T L A G G R D + + V Sbjct: 3 SIQQLLHVLQARPGVDQQIAVLHELNTSLTMASGHPSQNRVGGVIQTLVPLL--SGANNEVVLLAIRALITCIDITPRAAGSLV----------------------------ASGAVKPMCKRLLQIQDMDVAEACLKCLHLLS---KDNPRAVLEAGGAKACLAFFDFFPLELQKNALGTVSRLVA--PGVCGRRSDIRRAREV 172
BLAST of NO09G00160 vs. NCBI_GenBank
Match: XP_013897543.1 (E3 ubiquitin-protein ligase TRIP12, partial [Monoraphidium neglectum] >KIY98523.1 E3 ubiquitin-protein ligase TRIP12, partial [Monoraphidium neglectum]) HSP 1 Score: 79.0 bits (193), Expect = 2.500e-10 Identity = 66/237 (27.85%), Postives = 101/237 (42.62%), Query Frame = 0 Query: 3 LSALLAGIANPPSPAHQLSYLEDLNLQLTIGH-----GPLRLGEVTPLLLSLLTSSSPSPEAVLLAIRGLNTILDINPRAADLFVKRTYQQXXXXXXXXXXXXXXXXXXXXXXXXXXXXALCEKLLTIEDIEIAEQCLKCLSLVAGREGGQARAVLEAGGLTAATLYFDFFPLHLQRLALRTCLALCACVGGKEGGRGDGEKVQAVVPFWVRCLGLDDQLIRVQACQCLCTVIEKFA 235 + +L+G+ QLS L +L+ L+I + + +V PLL+ LL +P+ +LLA R L + D+ P + V+ Q A C +LL IE I++AEQ L+ L ++ ++L+ GGLTA Y DFFP +QR+A+ T +C + + G + VP L D I AC LC V E F+ Sbjct: 10 IKGILSGLRQFEDEGAQLSALTELSELLSISQEESLAATMPVEQVVPLLVQLL-GMEHNPDIMLLAARCLTFMADVMPTSCSSIVRHGAVQ----------------------------AFCARLLNIEYIDLAEQSLQALDKLSNE---HPASLLQQGGLTAVLSYLDFFPTGVQRVAVATAAKMCGALAPQHAG-----AARDAVPLLTNLLQYQDGRIVDSACAALCCVAEAFS 209
BLAST of NO09G00160 vs. NCBI_GenBank
Match: EPS57593.1 (hypothetical protein M569_17224, partial [Genlisea aurea]) HSP 1 Score: 77.4 bits (189), Expect = 7.100e-10 Identity = 63/234 (26.92%), Postives = 104/234 (44.44%), Query Frame = 0 Query: 3 LSALLAGIANPPSPAHQLSYLEDLNLQLTIGH----GPLRLGEVTPLLLSLLTSSSPSPEAVLLAIRGLNTILDINPRAADLFVKRTYQQXXXXXXXXXXXXXXXXXXXXXXXXXXXXALCEKLLTIEDIEIAEQCLKCLSLVAGREGGQARAVLEAGGLTAATLYFDFFPLHLQRLALRTCLALCACVGGKEGGRGDGEKVQAVVPFWVRCLGLDDQLIRVQACQCLCTVIEK 233 L LL+ + + QL+ L +L LT + L + +P+L++L S +P+ +LLA+R + DINPR++ V+ LCE+L+TIE +++AEQCL+ L ++ RE A L++G + A Y DFF +QR+AL T + +C K+ E + VP L +D+ + CL + +K Sbjct: 97 LKKLLSSLGGEEEESRQLALLTELCESLTFFYDSSLSSLLIDSFSPILVTLARHS--NPDIMLLALRAITYFCDINPRSSSFLVRH----------------------------DVVPTLCERLITIEYLDLAEQCLQALEKIS-RE--HPLACLQSGAIMAVLTYIDFFSTSVQRVALSTVVNIC-----KKLSNESSEHLMRAVPILCNLLQYEDKPLVESVAICLIRIGDK 292
BLAST of NO09G00160 vs. NCBI_GenBank
Match: ORX62548.1 (hypothetical protein DM01DRAFT_1403027 [Hesseltinella vesiculosa]) HSP 1 Score: 73.2 bits (178), Expect = 1.300e-8 Identity = 54/185 (29.19%), Postives = 85/185 (45.95%), Query Frame = 0 Query: 53 SSPSPEAVLLAIRGLNTILDINPRAADLFVKRTYQQXXXXXXXXXXXXXXXXXXXXXXXXXXXXALCEKLLTIEDIEIAEQCLKCLSLVAGREGGQARAVLEAGGLTAATLYFDFFPLHLQRLALRTCLALCACVGGKEGGRGDGEKVQAVVPFWVRCLGLDDQLIRVQACQCLCTVIEKFAALP 238 S +PE +LLA R L+ +LD P + V Q LC+KL +IE I++AEQ L L V+ + RAV++ G+TAA +YFDFF +H QR ALR A C + + +VQ ++P + + D+++ +C C ++E + + P Sbjct: 261 SGGNPEIMLLACRCLSNLLDALPTSVTHVVYHGGIQ----------------------------VLCQKLKSIEYIDLAEQALSALDKVSAQ---LPRAVIQEDGITAALMYFDFFSIHSQRTALRIA-ANCL----RNIDKSSFSQVQEILPILMNTIAYPDRMVVELSCLCWLRIVESYRSQP 409
BLAST of NO09G00160 vs. NCBI_GenBank
Match: XP_018807839.1 (PREDICTED: E3 ubiquitin-protein ligase UPL4 [Juglans regia] >XP_018807840.1 PREDICTED: E3 ubiquitin-protein ligase UPL4 [Juglans regia] >XP_018807841.1 PREDICTED: E3 ubiquitin-protein ligase UPL4 [Juglans regia]) HSP 1 Score: 72.4 bits (176), Expect = 2.300e-8 Identity = 60/231 (25.97%), Postives = 105/231 (45.45%), Query Frame = 0 Query: 6 LLAGIANPPSPAHQLSYLEDLNLQLTI----GHGPLRLGEVTPLLLSLLTSSSPSPEAVLLAIRGLNTILDINPRAADLFVKRTYQQXXXXXXXXXXXXXXXXXXXXXXXXXXXXALCEKLLTIEDIEIAEQCLKCLSLVAGREGGQARAVLEAGGLTAATLYFDFFPLHLQRLALRTCLALCACVGGKEGGRGDGEKVQAVVPFWVRCLGLDDQLIRVQACQCLCTVIEK 233 +L+ ++ P+ QL+ L +L L+ + ++PLL++L S +P+ +LLAIR + I D+ PR+++ ++ ALC++LL IE +++AEQCL+ L ++ RE Q A L+AG + A Y DFF +QR+AL T + +C K+ +P L +D+ + CL ++E+ Sbjct: 112 ILSSLSEETGPSEQLASLTELCEVLSFCTQDSLSSMVSDSLSPLLVNLAKHES-NPDIMLLAIRAITYICDVYPRSSNFLIRH----------------------------DAVPALCQRLLAIEYLDVAEQCLQALEKIS-RE--QPLACLQAGAIMAVLNYIDFFSTSVQRVALSTVVNVC-----KKLPSECPSSFMKAIPILCNLLQYEDRQLVEYVAICLIKIVER 305
BLAST of NO09G00160 vs. NCBI_GenBank
Match: XP_015944851.1 (E3 ubiquitin-protein ligase UPL4 isoform X1 [Arachis duranensis] >XP_015944852.1 E3 ubiquitin-protein ligase UPL4 isoform X1 [Arachis duranensis] >XP_015944853.1 E3 ubiquitin-protein ligase UPL4 isoform X1 [Arachis duranensis]) HSP 1 Score: 72.0 bits (175), Expect = 3.000e-8 Identity = 63/236 (26.69%), Postives = 101/236 (42.80%), Query Frame = 0 Query: 5 ALLAGIANPPSPAHQLSYLEDLNLQL---TIGHGPLRLGEVTPLLLSLLTSSSPSPEAVLLAIRGLNTILDINPRAADLFVKRTYQQXXXXXXXXXXXXXXXXXXXXXXXXXXXXALCEKLLTIEDIEIAEQCLKCLSLVAGREGGQARAVLEAGGLTAATLYFDFFPLHLQRLALRTCLALCACVGGKEGGRGDGEKVQAVVPFWVRCLGLDDQLIRVQACQCLCTVIEKFAALP 238 ++++ ++ P+ QL+ L +L L T G ++ LL L +P+ +L AIR + I D+ PR+A V+ ALC++LL IE ++AEQCL+ L ++ RE Q A L+AG + A Y DFF +QR+AL T + +C K+ VP L +D+ + CL ++E+ A P Sbjct: 108 SIISSLSGQTEPSGQLAVLTELCEVLSFCTEGSLSSMTSDLLSPLLVKLAKHESNPDIMLFAIRAITYICDLYPRSAAFLVRH----------------------------DAVPALCQRLLAIEYQDVAEQCLQALEKIS-RE--QPLACLQAGAIMAVLNYIDFFSTSIQRVALCTVVNIC-----KKLPSESPSPFMEAVPILCNLLQYEDRQLVENVATCLIKIVERVAQSP 307
BLAST of NO09G00160 vs. NCBI_GenBank
Match: XP_015944856.1 (E3 ubiquitin-protein ligase UPL4 isoform X3 [Arachis duranensis]) HSP 1 Score: 72.0 bits (175), Expect = 3.000e-8 Identity = 63/236 (26.69%), Postives = 101/236 (42.80%), Query Frame = 0 Query: 5 ALLAGIANPPSPAHQLSYLEDLNLQL---TIGHGPLRLGEVTPLLLSLLTSSSPSPEAVLLAIRGLNTILDINPRAADLFVKRTYQQXXXXXXXXXXXXXXXXXXXXXXXXXXXXALCEKLLTIEDIEIAEQCLKCLSLVAGREGGQARAVLEAGGLTAATLYFDFFPLHLQRLALRTCLALCACVGGKEGGRGDGEKVQAVVPFWVRCLGLDDQLIRVQACQCLCTVIEKFAALP 238 ++++ ++ P+ QL+ L +L L T G ++ LL L +P+ +L AIR + I D+ PR+A V+ ALC++LL IE ++AEQCL+ L ++ RE Q A L+AG + A Y DFF +QR+AL T + +C K+ VP L +D+ + CL ++E+ A P Sbjct: 108 SIISSLSGQTEPSGQLAVLTELCEVLSFCTEGSLSSMTSDLLSPLLVKLAKHESNPDIMLFAIRAITYICDLYPRSAAFLVRH----------------------------DAVPALCQRLLAIEYQDVAEQCLQALEKIS-RE--QPLACLQAGAIMAVLNYIDFFSTSIQRVALCTVVNIC-----KKLPSESPSPFMEAVPILCNLLQYEDRQLVENVATCLIKIVERVAQSP 307
BLAST of NO09G00160 vs. NCBI_GenBank
Match: XP_015944857.1 (E3 ubiquitin-protein ligase UPL4 isoform X2 [Arachis duranensis]) HSP 1 Score: 72.0 bits (175), Expect = 3.000e-8 Identity = 63/236 (26.69%), Postives = 101/236 (42.80%), Query Frame = 0 Query: 5 ALLAGIANPPSPAHQLSYLEDLNLQL---TIGHGPLRLGEVTPLLLSLLTSSSPSPEAVLLAIRGLNTILDINPRAADLFVKRTYQQXXXXXXXXXXXXXXXXXXXXXXXXXXXXALCEKLLTIEDIEIAEQCLKCLSLVAGREGGQARAVLEAGGLTAATLYFDFFPLHLQRLALRTCLALCACVGGKEGGRGDGEKVQAVVPFWVRCLGLDDQLIRVQACQCLCTVIEKFAALP 238 ++++ ++ P+ QL+ L +L L T G ++ LL L +P+ +L AIR + I D+ PR+A V+ ALC++LL IE ++AEQCL+ L ++ RE Q A L+AG + A Y DFF +QR+AL T + +C K+ VP L +D+ + CL ++E+ A P Sbjct: 108 SIISSLSGQTEPSGQLAVLTELCEVLSFCTEGSLSSMTSDLLSPLLVKLAKHESNPDIMLFAIRAITYICDLYPRSAAFLVRH----------------------------DAVPALCQRLLAIEYQDVAEQCLQALEKIS-RE--QPLACLQAGAIMAVLNYIDFFSTSIQRVALCTVVNIC-----KKLPSESPSPFMEAVPILCNLLQYEDRQLVENVATCLIKIVERVAQSP 307
BLAST of NO09G00160 vs. NCBI_GenBank
Match: XP_016183293.1 (E3 ubiquitin-protein ligase UPL4 isoform X1 [Arachis ipaensis] >XP_016183294.1 E3 ubiquitin-protein ligase UPL4 isoform X1 [Arachis ipaensis]) HSP 1 Score: 72.0 bits (175), Expect = 3.000e-8 Identity = 63/236 (26.69%), Postives = 101/236 (42.80%), Query Frame = 0 Query: 5 ALLAGIANPPSPAHQLSYLEDLNLQL---TIGHGPLRLGEVTPLLLSLLTSSSPSPEAVLLAIRGLNTILDINPRAADLFVKRTYQQXXXXXXXXXXXXXXXXXXXXXXXXXXXXALCEKLLTIEDIEIAEQCLKCLSLVAGREGGQARAVLEAGGLTAATLYFDFFPLHLQRLALRTCLALCACVGGKEGGRGDGEKVQAVVPFWVRCLGLDDQLIRVQACQCLCTVIEKFAALP 238 ++++ ++ P+ QL+ L +L L T G ++ LL L +P+ +L AIR + I D+ PR+A V+ ALC++LL IE ++AEQCL+ L ++ RE Q A L+AG + A Y DFF +QR+AL T + +C K+ VP L +D+ + CL ++E+ A P Sbjct: 108 SIISSLSGQTEPSGQLAVLTELCEVLSFCTEGSLSSMTSDLLSPLLVKLAKHESNPDIMLFAIRAITYICDLYPRSAAFLVRH----------------------------DAVPALCQRLLAIEYQDVAEQCLQALEKIS-RE--QPLACLQAGAIMAVLNYIDFFSTSIQRVALCTVVNIC-----KKLPSESPSPFMEAVPILCNLLQYEDRQLVENVATCLIKIVERVAQSP 307 The following BLAST results are available for this feature:
BLAST of NO09G00160 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO09G00160 ID=NO09G00160|Name=NO09G00160|organism=Nannochloropsis oceanica|type=gene|length=7837bpback to top protein sequence of NO09G00160.1 >NO09G00160.1-protein ID=NO09G00160.1-protein|Name=NO09G00160.1|organism=Nannochloropsis oceanica|type=polypeptide|length=2571bpback to top Synonyms
Publications
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