NO09G00140, NO09G00140 (gene) Nannochloropsis oceanica

Overview
NameNO09G00140
Unique NameNO09G00140
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2108
Alignment locationchr9:78329..80436 +

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr9genomechr9:78329..80436 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO09G00140 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL118nonsL118Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR021ncniR021Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR127ngnoR127Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK008364NSK008364Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO09G00140.1NO09G00140.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|646558gene_4547Nannochloropsis oceanica (N. oceanica CCMP1779)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO09G00140.1NO09G00140.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO09G00140 ID=NO09G00140|Name=NO09G00140|organism=Nannochloropsis oceanica|type=gene|length=2108bp
ATGAAGCACATGCTCTGGGCCCATGCAGCACGTGCTCACGCAGGCAATAT
TTGGGTCTCTCTTTTTCATTTTTACCTTATTTCCTTCCCATATTCACCTT
TGCTGGGCATAGGAATGGTTCCACTCATAAAGAATGACTGGACAATGATG
TACAGCAATCACCGGGTCCCAGCCAGCAATCACCGGGTTCCAACCAATGA
GGTTGTAGACATCCCTCTCATAAATTTCAGTTGACAGACCATTTCCCCCA
CCTAGAACAACCATGGCTCGCCGCGTGCTTCTTTATGCCCCTCTCCTTGT
CTACACCCTCCTACTCCTTTTCCTCCTTCTCTCTGTGACATTTGGGGTTC
CTATAGACCCCAATGCCACATCCATGCCCGGTGAAGAGGTGCCCTGTAAG
TCATCAATGGATGTTGTGAATGGGACGGCACGCCTGACGCTCTGCATGCA
AGGCCGCAAGGTGTGGAAGGAGCGCCGCAACAACGATCGCACGACGCAAG
TGTTTGCCACAATTTTGAATGCAGGGGACTCACAAGTCTGCGACCTTCAC
GTCGAAGTCTCGAACATGGAGAATGCCATTCGTTGGTGGCCCACGTGGTT
CAACACTACTGTTTATCCTTATTTTACCTTGTTGCCGGGCCAGACGGTCT
CGGTGGGTGCTGTCATCCCGCAAGCCAAGGGTTTCCCGCAAATCAAAATT
ACTCAGATGCGGCCATGTGACGGGGAATCCCCACCTTTAGACGAGGAAGA
TGACATCGACATGACCAATGAGGGGGAGGGGCCCCCTCCGAGCGACAGTA
TAGACCTCGCACGAAATGCCACGACTGCGACAATAACAACGACAAAACCA
GCGGCGACGTCGGGATTGACAATAAATCCGACGGTTCTCACGACGCCTAC
CGATTCTACTATTCCTGCTAAGCACATATCAGTTGAGGTCAACAAAGCAG
AAGGAGAGCCCACAGGTGCGACTACAGCATCGGCAATGCCTGCGGATCTG
GCGACGGCAGCCGATTCCACGGCCGTGGCTCCTGCGACGGTTCCGGCTCC
CAAGGCTGACGCTCCAGAAGACGAGGCGGTTGAGGGGGAAGAAGAGAATG
AACAAGAAGAGATCCCTTCCGCCTTGAAGGGCAAGAAGAAGTGCGAAGTT
GTGAAGGGGGTCAACGGCCTCCAAGCGCGTTGGTGCGTTGACCTGTCGCC
CAAAGTGTGGGTAGAGCCGAGGCGGAAGAAGCGATACGTTCGTGTGGCTG
GAGAAGTGACGAATATAATGAGCAATGTTTCTCTGTGCAATATTGAGATT
TGGCTACAGAGCAACAAGTCAGCCGTATCCACGTGGCCTGAATGGTGGCC
GAATAGCAGCGATGAGCAATTGGATCCTGGCAATTCTTTCATGGTTGGAG
CGAATGTGTATTTTAAAAGAGGAAAGCCCCAGATCAAATTGCTGTCATTC
GATGAATGTGTAGATACTGGGGCTTTGCCGGAGGATCCTCCTGCTTCAGT
GCCCACAGGTGGATATGGCGGGGGGGGCGCGGATTTTGGTGGCGACGTTG
GAGGAGGACCTGCTCCTAGCCCGTGGCAGTCACCTACGCAGAGCCAGGGT
CAAGAGCAGCGGCAAGGGCAGCAGCAAGATGGAGGGCAGCAATGGACTGC
GCCTACACCTGTACCAAAGCCGACCACGGTCGACCTCGGTGAAGCATACA
ATAACAACAGTAGTAACGACAACAATAACGAAGACCACAGCAACAACGCC
AACAACAAAAACAACAACAATAATGATTGGAATAATGGAGGTGGTGGTGA
TGGTGAAAGAGGAGATGGAGGAGGAAGAGGGGATGGTGGTAGCCAATGGC
ATGTGTAGAGGGGAGAAGAGCCCCGAGTGAGTACAAAAAGGGAAAGATGA
AATGGAAGAGTTGATGATCGCTTTCATAAGTGGAAGGACGGACAGTAAGT
TTCTTGACGCTGCATACCCAGATGAACTAGGAAGATATTCGATGTGGTAA
GAGCAAGCTAGGAATGTGTAGCTTAAGAAAGAGAATATGATGTGCGGGCA
TGTACAAATTTAACGTCAAGTGAGTGCCTCGAGCAAAACAGATATTTCCA
ACTGAACA
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protein sequence of NO09G00140.1

>NO09G00140.1-protein ID=NO09G00140.1-protein|Name=NO09G00140.1|organism=Nannochloropsis oceanica|type=polypeptide|length=532bp
MARRVLLYAPLLVYTLLLLFLLLSVTFGVPIDPNATSMPGEEVPCKSSMD
VVNGTARLTLCMQGRKVWKERRNNDRTTQVFATILNAGDSQVCDLHVEVS
NMENAIRWWPTWFNTTVYPYFTLLPGQTVSVGAVIPQAKGFPQIKITQMR
PCDGESPPLDEEDDIDMTNEGEGPPPSDSIDLARNATTATITTTKPAATS
GLTINPTVLTTPTDSTIPAKHISVEVNKAEGEPTGATTASAMPADLATAA
DSTAVAPATVPAPKADAPEDEAVEGEEENEQEEIPSALKGKKKCEVVKGV
NGLQARWCVDLSPKVWVEPRRKKRYVRVAGEVTNIMSNVSLCNIEIWLQS
NKSAVSTWPEWWPNSSDEQLDPGNSFMVGANVYFKRGKPQIKLLSFDECV
DTGALPEDPPASVPTGGYGGGGADFGGDVGGGPAPSPWQSPTQSQGQEQR
QGQQQDGGQQWTAPTPVPKPTTVDLGEAYNNNSSNDNNNEDHSNNANNKN
NNNNDWNNGGGGDGERGDGGGRGDGGSQWHV*
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Synonyms
Publications