NO09G00130, NO09G00130 (gene) Nannochloropsis oceanica

Overview
NameNO09G00130
Unique NameNO09G00130
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length384
Alignment locationchr9:74696..75079 -

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Properties
Property NameValue
Description5-hydroxyisourate hydrolase
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr9genomechr9:74696..75079 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
PXD0160542021-01-14
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
PXD0100302020-03-16
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR036817Transthyretin/HIU_hydrolase_sf
IPR023416Transthyretin/HIU_hydrolase_SF
IPR000895Transthyretin/HIU_hydrolase
Vocabulary: Molecular Function
TermDefinition
GO:0016787hydrolase activity
Vocabulary: Biological Process
TermDefinition
GO:0006139nucleobase-containing compound metabolic process
Homology
[Close]
BLAST of NO09G00130 vs. NCBI_GenBank
Match: XP_005852475.1 (5-hydroxyisourate hydrolase, partial [Nannochloropsis gaditana CCMP526] >XP_005855242.1 5-hydroxyisourate hydrolase, partial [Nannochloropsis gaditana CCMP526] >EKU21118.1 5-hydroxyisourate hydrolase, partial [Nannochloropsis gaditana CCMP526] >EKU23357.1 5-hydroxyisourate hydrolase, partial [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 183.0 bits (463), Expect = 6.000e-43
Identity = 87/121 (71.90%), Postives = 98/121 (80.99%), Query Frame = 0 
Query:    7 KRCPITSHILDTTLGKPAQGVALHLEQKKAGQGDTASSQWVVLGHGHTNADGRVETLLPTSHVLQSGVYRITFDVAAYFRASNTKAFYPEVTIVFEVERPEEHYHVPLLINPYAYSTYRGS 128
            KR PITSH+LDTTLGKPAQG+ L LEQ+        ++ W +LG G TNADGRVE LLP+SH L  G+Y+ITFDVA YFRA NTK+FYP VTI FEVERPEEHYHVPLLINP+AYSTYRGS
Sbjct:   40 KRSPITSHVLDTTLGKPAQGMPLRLEQQGEHGIGNGNATWTLLGEGLTNADGRVEDLLPSSHTLSPGIYKITFDVAVYFRAINTKSFYPSVTIEFEVERPEEHYHVPLLINPFAYSTYRGS 160
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BLAST of NO09G00130 vs. NCBI_GenBank
Match: EWM27800.1 (transthyretin family protein [Nannochloropsis gaditana])

HSP 1 Score: 183.0 bits (463), Expect = 6.000e-43
Identity = 87/121 (71.90%), Postives = 98/121 (80.99%), Query Frame = 0 
Query:    7 KRCPITSHILDTTLGKPAQGVALHLEQKKAGQGDTASSQWVVLGHGHTNADGRVETLLPTSHVLQSGVYRITFDVAAYFRASNTKAFYPEVTIVFEVERPEEHYHVPLLINPYAYSTYRGS 128
            KR PITSH+LDTTLGKPAQG+ L LEQ+        ++ W +LG G TNADGRVE LLP+SH L  G+Y+ITFDVA YFRA NTK+FYP VTI FEVERPEEHYHVPLLINP+AYSTYRGS
Sbjct:   34 KRSPITSHVLDTTLGKPAQGMPLRLEQQGEHGIGNGNATWTLLGEGLTNADGRVEDLLPSSHTLSPGIYKITFDVAVYFRAINTKSFYPSVTIEFEVERPEEHYHVPLLINPFAYSTYRGS 154
[Close]
BLAST of NO09G00130 vs. NCBI_GenBank
Match: XP_005832211.1 (hypothetical protein GUITHDRAFT_152774 [Guillardia theta CCMP2712] >EKX45231.1 hypothetical protein GUITHDRAFT_152774 [Guillardia theta CCMP2712])

HSP 1 Score: 134.4 bits (337), Expect = 2.500e-28
Identity = 66/123 (53.66%), Postives = 79/123 (64.23%), Query Frame = 0 
Query:    5 PKKRCPITSHILDTTLGKPAQGVALHLEQKKAGQGDTASSQWVVLGHGHTNADGRVETLLPTSHVLQSGVYRITFDVAAYFRASNTKAFYPEVTIVFEVERPEEHYHVPLLINPYAYSTYRGS 128
            P KR PITSH+LD  +G+PA  + + LEQK A       +QW  +G   TN+DGR   LL   H LQ G+YR TFD A Y+ AS    FYPEVTI FE+    EHYH+PLL+N Y YSTYRGS
Sbjct:    4 PGKRPPITSHVLDCGVGRPAADLLVVLEQKVA-------NQWQEIGRDKTNSDGRCPKLLSVDHKLQPGIYRCTFDTAGYYAASGGTCFYPEVTIAFEIVNVNEHYHIPLLLNQYGYSTYRGS 119
[Close]
BLAST of NO09G00130 vs. NCBI_GenBank
Match: WP_095977652.1 (hydroxyisourate hydrolase [Melittangium boletus] >ATB29029.1 5-hydroxyisourate hydrolase [Melittangium boletus DSM 14713])

HSP 1 Score: 129.8 bits (325), Expect = 6.000e-27
Identity = 64/117 (54.70%), Postives = 80/117 (68.38%), Query Frame = 0 
Query:   11 ITSHILDTTLGKPAQGVALHLEQKKAGQGDTASSQWVVLGHGHTNADGRVETLLPTSHVLQSGVYRITFDVAAYFRASNTKAFYPEVTIVFEVERPEEHYHVPLLINPYAYSTYRGS 128
            +++H+LDT  G+PA GV + LEQ+    GDT    W  L  G TNADGRV   LP +  L+ G YR+TF  A YFRA  TK FYP V++VFE+   EEHYHVPLL++P+ YSTYRGS
Sbjct:    4 LSTHVLDTQWGRPASGVPITLEQQ---AGDT----WRELARGTTNADGRVRDFLPANTRLEPGTYRMTFHTAEYFRAHQTKGFYPYVSVVFELASTEEHYHVPLLLSPFGYSTYRGS 113
[Close]
BLAST of NO09G00130 vs. NCBI_GenBank
Match: WP_013938418.1 (MULTISPECIES: hydroxyisourate hydrolase [Myxococcus] >AEI65270.1 transthyretin family protein [Myxococcus fulvus HW-1] >ATB50016.1 5-hydroxyisourate hydrolase [Myxococcus macrosporus DSM 14697])

HSP 1 Score: 129.4 bits (324), Expect = 7.900e-27
Identity = 59/117 (50.43%), Postives = 79/117 (67.52%), Query Frame = 0 
Query:   11 ITSHILDTTLGKPAQGVALHLEQKKAGQGDTASSQWVVLGHGHTNADGRVETLLPTSHVLQSGVYRITFDVAAYFRASNTKAFYPEVTIVFEVERPEEHYHVPLLINPYAYSTYRGS 128
            +++H+LDT  G+PA GV + LE ++      AS +W  L  G TN DGRV   LP    ++ G+YR+ FD  AYFRA   + FYP VT+VFE+  P+EHYHVPLL++P+ YSTYRGS
Sbjct:    4 LSTHVLDTHRGRPASGVPITLELQE------ASGEWKALARGVTNDDGRVRDFLPQGSRVEPGIYRMAFDTGAYFRALGVRGFYPSVTVVFELTAPDEHYHVPLLLSPFGYSTYRGS 114
[Close]
BLAST of NO09G00130 vs. NCBI_GenBank
Match: WP_044241334.1 (hydroxyisourate hydrolase [Chondromyces apiculatus] >EYF05667.1 5-Hydroxyisourate Hydrolase (HIUase) [Chondromyces apiculatus DSM 436])

HSP 1 Score: 129.4 bits (324), Expect = 7.900e-27
Identity = 66/118 (55.93%), Postives = 80/118 (67.80%), Query Frame = 0 
Query:   10 PITSHILDTTLGKPAQGVALHLEQKKAGQGDTASSQWVVLGHGHTNADGRVETLLPTSHVLQSGVYRITFDVAAYFRASNTKAFYPEVTIVFEVERPEEHYHVPLLINPYAYSTYRGS 128
            PIT+HILDT+ G+PA GV + LE        T   +  VLGHG T+ADGR+ TLL      Q G YR+TFD  AYF A   +AFYP V+IVF +  PEEH+HVPLL+NP+ YSTYRGS
Sbjct:    5 PITTHILDTSRGRPAAGVHVTLEYL------TEHGKASVLGHGLTDADGRLRTLLSGDERPQVGTYRLTFDTGAYFSALGVEAFYPSVSIVFLLRAPEEHHHVPLLLNPFGYSTYRGS 116
[Close]
BLAST of NO09G00130 vs. NCBI_GenBank
Match: WP_006972808.1 (hydroxyisourate hydrolase [Plesiocystis pacifica] >EDM78056.1 transthyretin family protein [Plesiocystis pacifica SIR-1])

HSP 1 Score: 129.0 bits (323), Expect = 1.000e-26
Identity = 65/120 (54.17%), Postives = 82/120 (68.33%), Query Frame = 0 
Query:    8 RCPITSHILDTTLGKPAQGVALHLEQKKAGQGDTASSQWVVLGHGHTNADGRVETLLPTSHVLQSGVYRITFDVAAYFRASNTKAFYPEVTIVFEVERPEEHYHVPLLINPYAYSTYRGS 128
            R PIT+HILDT LG+PA GV L L+++         + W  LG G TN DGRV  LL     L++GVYRI F+VAAYF  +  ++FYP V++ FEV   +EHYHVPLL+NP+ YSTYRGS
Sbjct:    3 RSPITTHILDTALGRPAAGVTLTLDRRD-------GAAWTRLGEGVTNDDGRVTDLLAPGS-LEAGVYRIEFEVAAYFARTARESFYPSVSVEFEVRATDEHYHVPLLLNPFGYSTYRGS 114
[Close]
BLAST of NO09G00130 vs. NCBI_GenBank
Match: ORX66681.1 (hydroxyisourate hydrolase [Basidiobolus meristosporus CBS 931.73] >ORX96245.1 hydroxyisourate hydrolase [Basidiobolus meristosporus CBS 931.73])

HSP 1 Score: 128.6 bits (322), Expect = 1.300e-26
Identity = 57/122 (46.72%), Postives = 83/122 (68.03%), Query Frame = 0 
Query:    6 KKRCPITSHILDTTLGKPAQGVALHLEQKKAGQGDTASSQWVVLGHGHTNADGRVETLLPTSHVLQSGVYRITFDVAAYFRASNTKAFYPEVTIVFEVERPEEHYHVPLLINPYAYSTYRGS 128
            + R P+T+H+LD+++G+PAQ V L +E+ +       +  W V+G G TN DGR   LL   + L++G+Y++TF+ A Y+     K FYP V I FE+  PEEHYH+PLL++PY+YSTYRGS
Sbjct:    2 RTRSPVTAHVLDSSVGRPAQDVKLTIEKLE-------NIHWQVIGGGLTNTDGRCPELLALDYDLKAGIYQVTFETAEYYERQGKKCFYPYVKITFEITNPEEHYHIPLLLSPYSYSTYRGS 116
[Close]
BLAST of NO09G00130 vs. NCBI_GenBank
Match: WP_002640468.1 (hydroxyisourate hydrolase [Myxococcus hansupus] >AKQ64100.1 5-Hydroxyisourate Hydrolase (HIUase) [Myxococcus hansupus])

HSP 1 Score: 127.5 bits (319), Expect = 3.000e-26
Identity = 60/117 (51.28%), Postives = 80/117 (68.38%), Query Frame = 0 
Query:   11 ITSHILDTTLGKPAQGVALHLEQKKAGQGDTASSQWVVLGHGHTNADGRVETLLPTSHVLQSGVYRITFDVAAYFRASNTKAFYPEVTIVFEVERPEEHYHVPLLINPYAYSTYRGS 128
            +++H+LDT  G+PA GV + LE     QG   + +W  L  G TN DGRV   LP    +++GVYR+TFD  AYFRA   + FYP VT++FE+  P+EHYHVPLL++P+ YSTYRGS
Sbjct:    4 LSTHVLDTNRGRPASGVPITLEL----QG--GAGEWKELARGVTNDDGRVRDFLPQGSRVETGVYRMTFDTGAYFRALGVRGFYPSVTVLFELTAPDEHYHVPLLLSPFGYSTYRGS 114
[Close]
BLAST of NO09G00130 vs. NCBI_GenBank
Match: WP_071641973.1 (hydroxyisourate hydrolase [Microbacterium sp. AR7-10] >OIU88130.1 hydroxyisourate hydrolase [Microbacterium sp. AR7-10])

HSP 1 Score: 126.3 bits (316), Expect = 6.700e-26
Identity = 63/117 (53.85%), Postives = 86/117 (73.50%), Query Frame = 0 
Query:   11 ITSHILDTTLGKPAQGVALHLEQKKAGQGDTASSQWVVLGHGHTNADGRVETLLPTSHVLQSGVYRITFDVAAYFRASNTKAFYPEVTIVFEVERPEEHYHVPLLINPYAYSTYRGS 128
            +T+HILDT++G+PA  VA+ LE   A QGD    +WV +G G T+ADGRV+ L P+  +L+SG YR+ FD AAYF   +T  F+PEV + F+V+  + HYHVPLL++P+AYSTYRGS
Sbjct:    6 VTTHILDTSIGRPAPDVAVALE---ARQGD----EWVGIGSGSTDADGRVKELGPS--LLESGAYRLRFDTAAYFAGIDTDTFFPEVVLTFQVDAEQAHYHVPLLLSPFAYSTYRGS 113
The following BLAST results are available for this feature:
BLAST of NO09G00130 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
XP_005852475.16.000e-4371.905-hydroxyisourate hydrolase, partial [Nannochlorop... [more]
EWM27800.16.000e-4371.90transthyretin family protein [Nannochloropsis gadi... [more]
XP_005832211.12.500e-2853.66hypothetical protein GUITHDRAFT_152774 [Guillardia... [more]
WP_095977652.16.000e-2754.70hydroxyisourate hydrolase [Melittangium boletus] >... [more]
WP_013938418.17.900e-2750.43MULTISPECIES: hydroxyisourate hydrolase [Myxococcu... [more]
WP_044241334.17.900e-2755.93hydroxyisourate hydrolase [Chondromyces apiculatus... [more]
WP_006972808.11.000e-2654.17hydroxyisourate hydrolase [Plesiocystis pacifica] ... [more]
ORX66681.11.300e-2646.72hydroxyisourate hydrolase [Basidiobolus meristospo... [more]
WP_002640468.13.000e-2651.28hydroxyisourate hydrolase [Myxococcus hansupus] >A... [more]
WP_071641973.16.700e-2653.85hydroxyisourate hydrolase [Microbacterium sp. AR7-... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL118nonsL118Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR021ncniR021Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR127ngnoR127Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO09G00130.1NO09G00130.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|589540gene_4549Nannochloropsis oceanica (N. oceanica CCMP1779)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO09G00130.1NO09G00130.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO09G00130 ID=NO09G00130|Name=NO09G00130|organism=Nannochloropsis oceanica|type=gene|length=384bp
ATGAGCACTGCCCCCAAAAAGCGTTGCCCAATTACCTCCCACATCCTTGA
CACCACCCTTGGCAAACCCGCCCAAGGCGTCGCCTTGCACCTCGAGCAAA
AAAAAGCAGGACAAGGAGACACCGCTTCCTCTCAATGGGTTGTGCTAGGG
CATGGTCACACAAACGCTGATGGGCGGGTGGAGACTTTATTACCCACCAG
CCATGTCTTGCAGTCGGGTGTGTATCGCATCACCTTCGACGTGGCCGCGT
ATTTCCGTGCGAGCAACACCAAGGCTTTTTACCCCGAGGTGACAATTGTA
TTTGAGGTGGAGAGGCCTGAAGAACATTATCATGTGCCCTTATTAATCAA
CCCGTATGCGTACTCCACGTATCGGGGGAGTTAG
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protein sequence of NO09G00130.1

>NO09G00130.1-protein ID=NO09G00130.1-protein|Name=NO09G00130.1|organism=Nannochloropsis oceanica|type=polypeptide|length=128bp
MSTAPKKRCPITSHILDTTLGKPAQGVALHLEQKKAGQGDTASSQWVVLG
HGHTNADGRVETLLPTSHVLQSGVYRITFDVAAYFRASNTKAFYPEVTIV
FEVERPEEHYHVPLLINPYAYSTYRGS*
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Synonyms
Publications