NO09G00020, NO09G00020 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO09G00020 vs. NCBI_GenBank
Match: EWM27830.1 (atp-dependent rna helicase [Nannochloropsis gaditana]) HSP 1 Score: 494.2 bits (1271), Expect = 6.300e-136 Identity = 248/299 (82.94%), Postives = 274/299 (91.64%), Query Frame = 0 Query: 284 MTLDEADQLLDPKNKVDCERIRGLIEATAPGRSQTGTKPCRYALFSATYSESVMNNVRAFVPHTYKRCLIQLDKNEVMVEEIAQLYVDLRDESGYDAPRHEQQRRKEDFVVALLKERTITGKIVIFVQSKRNCASLADRLRQLRHLEASEFHGGLSPEERDIYFADFIQGRRNVLVATDLLSRGIDVEGIAWVVNFDMPFQPRVARSDEEGSFTDTGAPETYIHRVGRTGRFGAEGIAVSLIGNREEWKLLGAIEKDYSSGLQAQDGE----LIHRVPADSIAEVEKVAKEVSDAVKKR 579 MTLDEADQLLD KNK+DCERIRGLIE TAPGR+++GT CRYALFSATYS+++M NVR FVP T KR LIQLDKNEVMVEEIAQLYVDLR E GYDAPR EQQRRKEDF+VALLKERTITGK+VIFVQSKR+CA+LADRLRQLRHLEASEFHGGL+PEERDI+FADFIQGRRNVLVATD+LSRGIDVEGIAWV+NFDMPFQPRVARSDEEG+ TDTGAPETYIHRVGRTGRFGAEGIAVSL+ N +EW LL AIE+DY+ G++AQ G+ LIH+VPADSI EVEKVAK+V+DAVK R Sbjct: 1 MTLDEADQLLDAKNKIDCERIRGLIEGTAPGRAKSGTPICRYALFSATYSDTIMANVRDFVPRTSKRALIQLDKNEVMVEEIAQLYVDLR-EQGYDAPRFEQQRRKEDFIVALLKERTITGKVVIFVQSKRSCAALADRLRQLRHLEASEFHGGLTPEERDIFFADFIQGRRNVLVATDVLSRGIDVEGIAWVINFDMPFQPRVARSDEEGNVTDTGAPETYIHRVGRTGRFGAEGIAVSLVANNQEWNLLRAIERDYALGIKAQAGQEAAVLIHQVPADSIPEVEKVAKQVADAVKTR 298
BLAST of NO09G00020 vs. NCBI_GenBank
Match: GAT44842.1 (predicted protein [Mycena chlorophos]) HSP 1 Score: 229.2 bits (583), Expect = 3.800e-56 Identity = 152/446 (34.08%), Postives = 231/446 (51.79%), Query Frame = 0 Query: 127 DDPLHSGVEFSDPTAAIPEQILAAAAELNLEEMSKIQHLTLPMFITDPETPHIIAQANSGSGKSAAFVIGTLALIDTEKTCPQAIILAPNRELVLQAYDWVRQLSKRMVPPLDVALALPDNAAFTRRRVQAHVVVGTPATTLRGIQNRSLDVSHVRIMTLDEADQLLDPKNKVDCERIRGLIEATAPGRSQTGTKPCRYALFSATYSESVMNNVRAFVPHTYKRCLIQLDKNEVMVEEIAQLYVDLRDESGYDAPRHEQQRRKEDFVVALLKERTITGKIVIFVQSKRNCASLADRLRQLRHLEASEFHGGLSPEERDIYFADFIQGRRNVLVATDLLSRGIDVEGIAWVVNFDMP--FQPRVARSDEEGSFTDTGAPETYIHRVGRTGRFGAEGIAVSLIGNREEWKLLGAIEKDYSSGLQAQDGELIHRVPADSIAEVEKVAKE 571 + PL+S F + + + +L ++ + SKIQ LP+ +++P T ++I Q+ SG+GK+AAFV+ L+ +D K PQA+ LAP+REL Q V + K P+ A+ DN A ++AH+VVGTP T I+ R LD S V++ LDEAD +LD + GL + T ++Q + + FSAT+ + V N F P+ K I+L K E+ + I Q Y+D ++E K D +V L TI G+ +IF Q K +A R+ H AS HG P ERD +F GR VL+ T+++SRGID+ + VVN+D+P ++ G D ETYIHR+GRTGRFG GI+++ + +++ W+ + IEK G+ I R+ + E+E+ KE Sbjct: 121 NSPLYSAKTFEE--LGLHDDLLKGIYDMGFTKPSKIQERALPLMLSNPPT-NMIGQSQSGTGKTAAFVLTMLSRVDFSKPQPQALCLAPSRELARQIMSVVVAMGK--FTPVQTEYAIKDNLARDSGPIKAHIVVGTPGTMTDLIRKRILDPSGVKVFVLDEADNMLDQE---------GLGDQTLRVKNQLPREGLQILAFSATFPDHVRNFASKFAPNANK---IELKKEELSISGIRQFYMDCKNEED-----------KYDVLVRLYALLTI-GQSIIFCQHKHTADRIAQRMTAEGHKVAS-LHGAKDPAERDAIIDNFRDGREKVLITTNVISRGIDILQVNMVVNYDLPLMYERNTGAGAGPGGSYDRPDIETYIHRIGRTGRFGRRGISINFVHDKKTWQQMDQIEK--------ATGKTITRIETGDVDEMERKMKE 528
BLAST of NO09G00020 vs. NCBI_GenBank
Match: XP_018735620.1 (ATP-dependent RNA helicase DBP5 [Sugiyamaella lignohabitans] >ANB13143.1 ATP-dependent RNA helicase DBP5 [Sugiyamaella lignohabitans]) HSP 1 Score: 228.4 bits (581), Expect = 6.400e-56 Identity = 154/451 (34.15%), Postives = 242/451 (53.66%), Query Frame = 0 Query: 127 DDPLHSGVEFSDPTAAIPEQILAAAAELNLEEMSKIQHLTLPMFITDPETPHIIAQANSGSGKSAAFVIGTLALIDTEKTCPQAIILAPNRELVLQAYDWVRQLSKRMVPPLDVALALPDNAAFTRRRVQAHVVVGTPATTLRGIQNRSLDVSHVRIMTLDEADQLLDPKNKVD-CERIRGLIEATAPGRSQTGTKPCRYALFSATYSESVMNNVRAFVPHTYKRCLIQLDKNEVMVEEIAQLYVDLRDESGYDAPRHEQQRRKEDFVVALLKERTITGKIVIFVQSKRNCASLADRLRQLRHLEASEFHGGLSPEERDIYFADFIQGRRNVLVATDLLSRGIDVEGIAWVVNFDMPFQPRVARSDEEGSFTDTGAPETYIHRVGRTGRFGAEGIAVSLIGNREEWKLLGAIEKDYSSGLQAQDGELIHRVPADSIAEVEKVAKEVSDAVK 577 + PL+S F D + E++L + + SKIQ LP+ + +P ++I Q+ SG+GK+AAF + L+ +DT+ QA+ L+P RELV Q D V + K + ALA+PD+ +V AH++VGTP T L ++ R LD+S +++ LDEAD +LD + D C+R++ +I+ + LFSAT+++ V FVP+ + I+L E+ V+ I QLY+D +DE+ K + +V L + TI G +IFV+ K L ++ + H + S H L+ E+RD DF GR VL+ T++L+RGID+ + VVN+D+P R R+D P TY+HR+GRTGRFG G+++S I +R + +L I + G G + +VP D E+EK+ V+ A+K Sbjct: 129 NSPLYSVKRFED--LGLSEELLKGLYAMKFSKPSKIQEKALPLLLNNP-PQNLIGQSQSGTGKTAAFALNMLSRVDTKVNKVQALCLSPTRELVRQIMDVVETMGK--FTDITTALAIPDSYE-RNAKVNAHIIVGTPGTVLDLVRRRQLDLSALKVFVLDEADNMLDLQGLGDQCQRVKKMIKPNV-----------QLVLFSATFADEVRVYAEKFVPNANE---IKLKAEELNVDGIKQLYMDCKDEA-----------HKYEVLVGLYELLTI-GSSIIFVRKKETANFLYGKMTKEGH-KVSVLHSDLTTEDRDRLIDDFRDGRSKVLITTNVLARGIDIASVTMVVNYDLP-TDRNGRAD----------PATYLHRIGRTGRFGRTGVSISFIHDRASYNVLQDIIDYFGEG-----GITMTKVPTDDWEEIEKI---VNKAIK 527
BLAST of NO09G00020 vs. NCBI_GenBank
Match: EIF47680.1 (atp-dependent rna helicase ddx19b [Brettanomyces bruxellensis AWRI1499]) HSP 1 Score: 228.0 bits (580), Expect = 8.400e-56 Identity = 158/446 (35.43%), Postives = 234/446 (52.47%), Query Frame = 0 Query: 127 DDPLHSGVEFSDPTAAIPEQILAAAAELNLEEMSKIQHLTLPMFITDPETPHIIAQANSGSGKSAAFVIGTLALIDTEKTCPQAIILAPNRELVLQAYDWVRQLSKRMVPPLDVALALPDNAAFTRRRVQAHVVVGTPATTLRGIQNRSLDVSHVRIMTLDEADQLLDPKN-KVDCERIRGLIEATAPGRSQTGTKPCRYALFSATYSESVMNNVRAFVPHTYKRCLIQLDKNEVMVEEIAQLYVDLRDESGYDAPRHEQQRRKEDFVVALLKERTITGKIVIFVQSKRNCASLADRLRQLRHLEASEFHGGLSPEERDIYFADFIQGRRNVLVATDLLSRGIDVEGIAWVVNFDMPFQPRVARSDEEGSFTDTGAPETYIHRVGRTGRFGAEGIAVSLIGNREEWKLLGAIEKDYSSGLQAQDGELIHRVPADSIAEVEKVAKEV 572 + PL+S F D + E +L + + SKIQ LP+ + +P ++IAQ+ SG+GK+AAF + L+ +D K CPQAI L+P REL Q + + ++ K + L +P + A R+ A ++VGTP L + S+DVS V+I LDEAD +LD + C R + + K + ALFSAT+ E V + FVP+ ++L + E+ V+ I QLY+D E K + + L TI I IFVQ K L R++ H S HGGL PE+RD DF +GR VL+ T++L+RGID+ ++ VVN+DMP+ D+ G PETY+HR+GRTGRFG G+++S I +++ ++ L I Y GL+ + RVP+D EVEK+ K+V Sbjct: 91 NSPLYSVKSFED--LGLTEGLLKGLYAMKFSKPSKIQEKALPLLLANP-PKNLIAQSQSGTGKTAAFALSMLSRVDENKKCPQAICLSPARELARQTLEVIEEMGK--YTGISYQLVVPGSTA-REERINAQILVGTPGAILGLTKRGSIDVSAVKIFVLDEADNMLDQQGLGSQCLRYKNSL-----------PKQVQIALFSATFPEKVNKYAKRFVPNAN---TLELKQEELNVKAIKQLYMDCDSEG-----------HKFECLCELYGLLTIASSI-IFVQRKITADKLYIRMKNEGH-AVSVLHGGLVPEDRDRLIDDFREGRSKVLITTNVLARGIDIPSVSMVVNYDMPY-------DKNGK----PDPETYLHRIGRTGRFGRTGVSISFIHDKKSYECLKYI-AHYFGGLE------LTRVPSDDWDEVEKIVKKV 485
BLAST of NO09G00020 vs. NCBI_GenBank
Match: SCU77759.1 (LADA_0A02080g1_1 [Lachancea dasiensis CBS 10888]) HSP 1 Score: 227.6 bits (579), Expect = 1.100e-55 Identity = 155/446 (34.75%), Postives = 243/446 (54.48%), Query Frame = 0 Query: 127 DDPLHSGVEFSDPTAAIPEQILAAAAELNLEEMSKIQHLTLPMFITDPETPHIIAQANSGSGKSAAFVIGTLALIDTEKTCPQAIILAPNRELVLQAYDWVRQLSKRMVPPLDVALALPDNAAFTRRRVQAHVVVGTPATTLRGIQNRSLDVSHVRIMTLDEADQLLDPKNKVD-CERIRGLIEATAPGRSQTGTKPCRYALFSATYSESVMNNVRAFVPHTYKRCLIQLDKNEVMVEEIAQLYVDLRDESGYDAPRHEQQRRKEDFVVALLKERTITGKIVIFVQSKRNCASLADRLRQLRHLEASEFHGGLSPEERDIYFADFIQGRRNVLVATDLLSRGIDVEGIAWVVNFDMPFQPRVARSDEEGSFTDTGAPETYIHRVGRTGRFGAEGIAVSLIGNREEWKLLGAIEKDYSSGLQAQDGELIHRVPADSIAEVEKVAKEV 572 + PL+S F + + ++L + ++ SKIQ LP+ + DP ++IAQ+ SG+GK+AAF + L+ +D + QAI LAP+REL Q + V+++ K + L +PD+ + + A V+VGTP T L ++ +++ + V++ LDEAD +LD + D C R++ + K + LFSAT+ +SV N R VP+ ++L KNEV V I QL++D DE+ K + + L TI G +IFVQ+K+ L +L+Q H + S HG L ERD DF +GR VL+ T++L+RGID+ ++ VVN+D+P + ++D P TYIHR+GRTGRFG G+A+S + +R+ +++L AI+K + D E+ RVP D EVEK+ K+V Sbjct: 81 NSPLYSIKSFEE--LGLAPELLKGLYAMKFQKPSKIQERALPLLLNDPPR-NMIAQSQSGTGKTAAFSLTMLSRVDVAQPATQAICLAPSRELARQTLEVVQEMGK--FTKVTSQLIVPDSFE-KNKPIAAQVIVGTPGTVLDLMRRKAIQLGQVKVFVLDEADNMLDKQGLGDQCLRVKKFL-----------PKATQLVLFSATFDDSVRNYARKVVPNANS---LELQKNEVNVSAIKQLFMDCTDEN-----------NKYEVLTELYGLLTI-GSSIIFVQTKQTANVLYAKLKQEGH-QVSILHGDLQSSERDRLIDDFREGRSKVLITTNVLARGIDIPTVSMVVNYDLPTTVQ-GKAD----------PSTYIHRIGRTGRFGRTGVAISFVHDRKSFEVLTAIQKYFG------DIEMT-RVPTDDWDEVEKIVKKV 475
BLAST of NO09G00020 vs. NCBI_GenBank
Match: GAT44840.1 (predicted protein [Mycena chlorophos]) HSP 1 Score: 226.5 bits (576), Expect = 2.500e-55 Identity = 148/428 (34.58%), Postives = 223/428 (52.10%), Query Frame = 0 Query: 145 EQILAAAAELNLEEMSKIQHLTLPMFITDPETPHIIAQANSGSGKSAAFVIGTLALIDTEKTCPQAIILAPNRELVLQAYDWVRQLSKRMVPPLDVALALPDNAAFTRRRVQAHVVVGTPATTLRGIQNRSLDVSHVRIMTLDEADQLLDPKNKVDCERIRGLIEATAPGRSQTGTKPCRYALFSATYSESVMNNVRAFVPHTYKRCLIQLDKNEVMVEEIAQLYVDLRDESGYDAPRHEQQRRKEDFVVALLKERTITGKIVIFVQSKRNCASLADRLRQLRHLEASEFHGGLSPEERDIYFADFIQGRRNVLVATDLLSRGIDVEGIAWVVNFDMP--FQPRVARSDEEGSFTDTGAPETYIHRVGRTGRFGAEGIAVSLIGNREEWKLLGAIEKDYSSGLQAQDGELIHRVPADSIAEVEKVAKE 571 + +L ++ + SKIQ LP+ +++P T ++I Q+ SG+GK+AAFV+ L+ +D K PQA+ LAP+REL Q V + K P+ A+ DN A ++AH+VVGTP T I+ R LD S V++ LDEAD +LD + GL + T ++Q + + FSAT+ + V N F P+ K I+L K E+ + I Q Y+D ++E K D +V L TI G+ +IF Q K +A R+ H AS HG P ERD +F GR VL+ T+++SRGID+ + VVN+D+P ++ G D ETYIHR+GRTGRFG GI+++ + +++ W+ + IEK G+ I R+ + E+E+ KE Sbjct: 83 DDLLKGIYDMGFTKPSKIQERALPLMLSNPPT-NMIGQSQSGTGKTAAFVLTMLSRVDFSKPQPQALCLAPSRELARQIMSVVVAMGK--FTPVQTEYAIKDNLARDSGPIKAHIVVGTPGTMTDLIRKRILDPSGVKVFVLDEADNMLDQE---------GLGDQTLRVKNQLPREGLQILAFSATFPDHVRNFASKFAPNANK---IELKKEELSISGIRQFYMDCKNEED-----------KYDVLVRLYALLTI-GQSIIFCQHKHTADRIAQRMTAEGHKVAS-LHGAKDPAERDAIIDNFRDGREKVLITTNVISRGIDILQVNMVVNYDLPLMYERNTGAGAGPGGSYDRPDIETYIHRIGRTGRFGRRGISINFVHDKKTWQQMDQIEK--------ATGKTITRIETGDVDEMERKMKE 474
BLAST of NO09G00020 vs. NCBI_GenBank
Match: GAT44841.1 (predicted protein [Mycena chlorophos]) HSP 1 Score: 226.5 bits (576), Expect = 2.500e-55 Identity = 148/428 (34.58%), Postives = 223/428 (52.10%), Query Frame = 0 Query: 145 EQILAAAAELNLEEMSKIQHLTLPMFITDPETPHIIAQANSGSGKSAAFVIGTLALIDTEKTCPQAIILAPNRELVLQAYDWVRQLSKRMVPPLDVALALPDNAAFTRRRVQAHVVVGTPATTLRGIQNRSLDVSHVRIMTLDEADQLLDPKNKVDCERIRGLIEATAPGRSQTGTKPCRYALFSATYSESVMNNVRAFVPHTYKRCLIQLDKNEVMVEEIAQLYVDLRDESGYDAPRHEQQRRKEDFVVALLKERTITGKIVIFVQSKRNCASLADRLRQLRHLEASEFHGGLSPEERDIYFADFIQGRRNVLVATDLLSRGIDVEGIAWVVNFDMP--FQPRVARSDEEGSFTDTGAPETYIHRVGRTGRFGAEGIAVSLIGNREEWKLLGAIEKDYSSGLQAQDGELIHRVPADSIAEVEKVAKE 571 + +L ++ + SKIQ LP+ +++P T ++I Q+ SG+GK+AAFV+ L+ +D K PQA+ LAP+REL Q V + K P+ A+ DN A ++AH+VVGTP T I+ R LD S V++ LDEAD +LD + GL + T ++Q + + FSAT+ + V N F P+ K I+L K E+ + I Q Y+D ++E K D +V L TI G+ +IF Q K +A R+ H AS HG P ERD +F GR VL+ T+++SRGID+ + VVN+D+P ++ G D ETYIHR+GRTGRFG GI+++ + +++ W+ + IEK G+ I R+ + E+E+ KE Sbjct: 153 DDLLKGIYDMGFTKPSKIQERALPLMLSNPPT-NMIGQSQSGTGKTAAFVLTMLSRVDFSKPQPQALCLAPSRELARQIMSVVVAMGK--FTPVQTEYAIKDNLARDSGPIKAHIVVGTPGTMTDLIRKRILDPSGVKVFVLDEADNMLDQE---------GLGDQTLRVKNQLPREGLQILAFSATFPDHVRNFASKFAPNANK---IELKKEELSISGIRQFYMDCKNEED-----------KYDVLVRLYALLTI-GQSIIFCQHKHTADRIAQRMTAEGHKVAS-LHGAKDPAERDAIIDNFRDGREKVLITTNVISRGIDILQVNMVVNYDLPLMYERNTGAGAGPGGSYDRPDIETYIHRIGRTGRFGRRGISINFVHDKKTWQQMDQIEK--------ATGKTITRIETGDVDEMERKMKE 544
BLAST of NO09G00020 vs. NCBI_GenBank
Match: GAT44843.1 (predicted protein [Mycena chlorophos]) HSP 1 Score: 226.5 bits (576), Expect = 2.500e-55 Identity = 148/428 (34.58%), Postives = 223/428 (52.10%), Query Frame = 0 Query: 145 EQILAAAAELNLEEMSKIQHLTLPMFITDPETPHIIAQANSGSGKSAAFVIGTLALIDTEKTCPQAIILAPNRELVLQAYDWVRQLSKRMVPPLDVALALPDNAAFTRRRVQAHVVVGTPATTLRGIQNRSLDVSHVRIMTLDEADQLLDPKNKVDCERIRGLIEATAPGRSQTGTKPCRYALFSATYSESVMNNVRAFVPHTYKRCLIQLDKNEVMVEEIAQLYVDLRDESGYDAPRHEQQRRKEDFVVALLKERTITGKIVIFVQSKRNCASLADRLRQLRHLEASEFHGGLSPEERDIYFADFIQGRRNVLVATDLLSRGIDVEGIAWVVNFDMP--FQPRVARSDEEGSFTDTGAPETYIHRVGRTGRFGAEGIAVSLIGNREEWKLLGAIEKDYSSGLQAQDGELIHRVPADSIAEVEKVAKE 571 + +L ++ + SKIQ LP+ +++P T ++I Q+ SG+GK+AAFV+ L+ +D K PQA+ LAP+REL Q V + K P+ A+ DN A ++AH+VVGTP T I+ R LD S V++ LDEAD +LD + GL + T ++Q + + FSAT+ + V N F P+ K I+L K E+ + I Q Y+D ++E K D +V L TI G+ +IF Q K +A R+ H AS HG P ERD +F GR VL+ T+++SRGID+ + VVN+D+P ++ G D ETYIHR+GRTGRFG GI+++ + +++ W+ + IEK G+ I R+ + E+E+ KE Sbjct: 83 DDLLKGIYDMGFTKPSKIQERALPLMLSNPPT-NMIGQSQSGTGKTAAFVLTMLSRVDFSKPQPQALCLAPSRELARQIMSVVVAMGK--FTPVQTEYAIKDNLARDSGPIKAHIVVGTPGTMTDLIRKRILDPSGVKVFVLDEADNMLDQE---------GLGDQTLRVKNQLPREGLQILAFSATFPDHVRNFASKFAPNANK---IELKKEELSISGIRQFYMDCKNEED-----------KYDVLVRLYALLTI-GQSIIFCQHKHTADRIAQRMTAEGHKVAS-LHGAKDPAERDAIIDNFRDGREKVLITTNVISRGIDILQVNMVVNYDLPLMYERNTGAGAGPGGSYDRPDIETYIHRIGRTGRFGRRGISINFVHDKKTWQQMDQIEK--------ATGKTITRIETGDVDEMERKMKE 474
BLAST of NO09G00020 vs. NCBI_GenBank
Match: PCH42042.1 (ATP-dependent RNA helicase DBP5 [Wolfiporia cocos MD-104 SS10]) HSP 1 Score: 225.7 bits (574), Expect = 4.200e-55 Identity = 151/427 (35.36%), Postives = 227/427 (53.16%), Query Frame = 0 Query: 119 EVVATMSE-----DDPLHSGVEFSDPTAAIPEQILAAAAELNLEEMSKIQHLTLPMFITDPETPHIIAQANSGSGKSAAFVIGTLALIDTEKTCPQAIILAPNRELVLQAYDWVRQLSKRMVPPLDVALALPDNAAFTRRRVQAHVVVGTPATTLRGIQNRSLDVSHVRIMTLDEADQLLDPKNKVDCERIRGLIEATAPGRSQTGTKPCRYALFSATYSESVMNNVRAFVPHTYKRCLIQLDKNEVMVEEIAQLYVDLRDESGYDAPRHEQQRRKEDFVVALLKERTITGKIVIFVQSKRNCASLADRLRQLRHLEASEFHGGLSPEERDIYFADFIQGRRNVLVATDLLSRGIDVEGIAWVVNFDMP-FQPRVARSDEEGSFTDTGAPETYIHRVGRTGRFGAEGIAVSLIGNREEWKLLGAIEK 540 EV T+++ + PL+S F + E +L ++ + SKIQ LP+ + +P ++I Q+ SG+GK+AAFV+ L+ ID K PQAI LAP+REL Q V + K P+ A+ D +RV AHV+VGTP T + I+ + LDVS V++ LDEAD +LD GL E T ++ + LFSAT+ + V N F P+ K I+L +NE+ V+ I Q Y+D R+E + K D +V+L + TI G+ +IF + + +A R+ H AS HG ERD F +GR VL+ T++++RGID+ + VVN+D+P R +++E D ETYIHR+GRTGRFG +GI+++ + +R W+ + IEK Sbjct: 40 EVSVTLADQQADPNSPLYSAKTFEQ--LGLHEDLLKGIYDMGFSKPSKIQERALPLMLANP-PQNMIGQSQSGTGKTAAFVLTMLSRIDFSKPKPQAICLAPSRELARQTMSVVVAMGK--FTPVQTEYAIKDAIPRGTQRVDAHVIVGTPGTAIDLIRRKVLDVSEVKVFVLDEADNMLDQD---------GLGEQTLRVKNMLPRNTVQIILFSATFPDHVRNFANKFAPNANK---IELQRNELSVDNIRQFYMDCRNE-----------QHKYDVLVSLYQLLTI-GQSIIFCKQRSTADRIAQRMTAEGHKVAS-LHGAKDAAERDAIIDGFREGRDKVLITTNVIARGIDILQVNMVVNYDLPLLNERDNWNNKEDQLPDI---ETYIHRIGRTGRFGRKGISINFVHDRTTWEQMEQIEK 433
BLAST of NO09G00020 vs. NCBI_GenBank
Match: XP_001551325.2 (Bcdbp5 [Botrytis cinerea B05.10] >CCD44156.1 similar to ATP-dependent RNA helicase dbp5 [Botrytis cinerea T4] >EMR87108.1 putative atp-dependent rna helicase dbp5 protein [Botrytis cinerea BcDW1] >ATZ57140.1 Bcdbp5 [Botrytis cinerea B05.10]) HSP 1 Score: 225.3 bits (573), Expect = 5.500e-55 Identity = 157/448 (35.04%), Postives = 241/448 (53.79%), Query Frame = 0 Query: 126 EDDPLHSGVEFSDPTAAIPEQILAAAAELNLEEMSKIQHLTLPMFITDPETPHIIAQANSGSGKSAAFVIGTLALIDTEK-TCPQAIILAPNRELVLQAYDWVRQLSKRMVPPLDVALALPDNAAFTRRRVQAHVVVGTPATTLRGIQNRSLDVSHVRIMTLDEADQLLDPKNKVD-CERIRGLIEATAPGRSQTGTKPCRYALFSATYSESVMNNVRAFVPHTYKRCLIQLDKNEVMVEEIAQLYVDLRDESGYDAPRHEQQRRKEDFVVALLKERTITGKIVIFVQSKRNCASLADRLRQLRHLEASEFHGGLSPEERDIYFADFIQGRRNVLVATDLLSRGIDVEGIAWVVNFDMPFQPRVARSDEEGSFTDTGAPETYIHRVGRTGRFGAEGIAVSLIGNREEWKLLGAIEKDYSSGLQAQDGELIHRVPADSIAEVEKVAKEV 572 E PL+S F I IL +N ++ SKIQ LP+ + +P T ++IAQ+ SG+GK+AAFVI L+ +D K T PQA+ LAP+REL Q +R + + V L V A+P A +V A VVVGTP T + I+ RS+D S ++I+ LDEAD +LD + D C R++ +I + LFSAT+ + V + F P + I+L ++E+ V I Q+++D +E G K + +V L TI G +IFV+ + +++A+RL + H + + HG ERD DF QG+ VL+ T++L+RGIDV+ ++ V+N+D+P + RSD E PETY+HR+GRTGRFG G+++S + +R+ + L I Y+ L ++ D E E++ K+V Sbjct: 61 ETSPLYSVETFEQ--LGIDASILKGLYAMNFKKPSKIQEKALPLLLRNPPT-NMIAQSQSGTGKTAAFVITILSRLDFSKPTTPQALCLAPSRELARQIEGVIRSIG-QFVDGLTVQAAIP-GAVERNAKVNAMVVVGTPGTVMDLIKRRSIDASQMKILCLDEADNMLDQQGLGDQCMRVKSMIRVE------------QILLFSATFPDEVYGFAQDFSPRANE---IKLKRDELTVSGIKQMFMDCPNEVG-----------KYEILVKLYGLMTI-GSSIIFVKRRDTASNIAERLTKEGH-KVAAVHGAFEGSERDQVLEDFRQGKAKVLITTNVLARGIDVQSVSMVINYDVPMK---GRSDSEPD------PETYLHRIGRTGRFGRVGVSISFVFDRKSYDALNQIANHYNIDL--------IKLNQDDWDETEEIVKKV 458 The following BLAST results are available for this feature:
BLAST of NO09G00020 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO09G00020 ID=NO09G00020|Name=NO09G00020|organism=Nannochloropsis oceanica|type=gene|length=5482bpback to top protein sequence of NO09G00020.1 >NO09G00020.1-protein ID=NO09G00020.1-protein|Name=NO09G00020.1|organism=Nannochloropsis oceanica|type=polypeptide|length=661bpback to top Synonyms
Publications
|