NO08G04400, NO08G04400 (gene) Nannochloropsis oceanica

Overview
NameNO08G04400
Unique NameNO08G04400
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1686
Alignment locationchr8:1289060..1290745 -

Link to JBrowse

Properties
Property NameValue
DescriptionJmjc domain-containing 4-like protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr8genomechr8:1289060..1290745 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR003347JmjC_dom
Homology
BLAST of NO08G04400 vs. NCBI_GenBank
Match: XP_005852702.1 (jmjc domain-containing 4-like protein, partial [Nannochloropsis gaditana CCMP526] >XP_005855752.1 jmjc domain-containing 4-like protein, partial [Nannochloropsis gaditana CCMP526] >EKU20607.1 jmjc domain-containing 4-like protein, partial [Nannochloropsis gaditana CCMP526] >EKU23130.1 jmjc domain-containing 4-like protein, partial [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 424.9 bits (1091), Expect = 4.000e-115
Identity = 253/560 (45.18%), Postives = 319/560 (56.96%), Query Frame = 0
Query:    9 HDTANTSISSSIARIDFAAASVTLLRAYLDANVPFILVNVASNWRAMREWVAPGEEEDFVTIDLLQATFRG-------RDVLVPVVECHSGNRDENDDAVRQQSEVGRGNSKSGTNSMQHAYGEEPRRERTLTEYAALWRSGEAEARRLYMKDWHIVKALRAICKDDHISGVEGTTEQHVHILSSTTTATVRESNNEDNGKGVRPDTAANRNGSTSSSSMTPSNVTEALASFPYYIVPSPLDDDWLNDWWDAPAMDAGHAAREDDFRFLYLGPAGSTTGVHHDVLCSYSWSVNLAGSKEWTLYPPASSPPAPFTTSSTDLPTAEPASMHEGTVPANQRQTQSLGFRPTSTASAPDAVSIASPFFHPGTVPTLVVRQGPGELMFVPSGWHHKVRNLTSCLSINHNWFNRSSLARVWAFLKEEASAVQEKLGHLRETFDEDVGGWERQCEVVLRANSAMNLTEWVGMLMWKAREFRRVGKIVDRDEARQDLEAILGVLREVASAPKLVDFLFPPHLERGNEQAEEGVPAPRLPLRIDLLPSVEAWLAAEIRQIEASLE-LIG 561
            H  +   I   I RI+ A+AS  LLR +LD+N PF++ ++AS W A R WV PGEEE+F T+DL +    G        + LVPVVEC        DD   +  E    ++ +      ++YG E R E   TEYA LWR+GEAEAR LY+KDWHIVK L+ +  D      +   E    I        V  +  +    GV+ +      G+   + ++P+  T   A F    VP PL DDWLN WWDAPA +AGH AREDD+RFLYLGPAG+ TG+H+DVLCSYSWS NLAG+KEWTL  P       F   +  L         + TVP        +  R                           VRQGPGE++FVPSGW H+VRN+T CLSINHNWFNRS L RVW F+KEEASAVQE+L  LRETFD  + GWERQCEVV+RANS++NLTEWV +L+WKAR+ R   K     +AR DL AIL VLREV  + + V+FLFP       E + E +    LPL+ +     E WLAAEI+Q+E   E L+G
Sbjct:    3 HGVSELKIILMIPRIESASASPALLRHFLDSNAPFLITDLASRWEATRAWVVPGEEENFQTLDLFENFICGHNRGELAEETLVPVVEC------PGDDDKHENVEGHHSHTSNSCQDKSNSYGTELRTEMHFTEYARLWRTGEAEARGLYLKDWHIVKVLKGL--DGKHDKQDVREEVKAGIKDGDELCDVLATGKQ----GVQEERHEELVGA-CGAEVSPARPTAPSALFS---VPFPLTDDWLNAWWDAPASEAGHPAREDDYRFLYLGPAGTQTGLHYDVLCSYSWSANLAGTKEWTLIHPDQK---GFLAENLPL---------QSTVPFGSVDWSDVAVR---------------------------VRQGPGEMIFVPSGWFHRVRNVTGCLSINHNWFNRSCLDRVWTFVKEEASAVQERLYDLRETFDASLCGWERQCEVVMRANSSINLTEWVDLLLWKARDLRLRQKDTVAPDARLDLLAILKVLREVQRSERYVNFLFPS--RNHEEPSVENLRPLPLPLQANSTSQTEEWLAAEIQQLEKCAERLVG 505          
BLAST of NO08G04400 vs. NCBI_GenBank
Match: EWM26897.1 (jmjc domain-containing protein 4 [Nannochloropsis gaditana])

HSP 1 Score: 424.9 bits (1091), Expect = 4.000e-115
Identity = 253/560 (45.18%), Postives = 319/560 (56.96%), Query Frame = 0
Query:    9 HDTANTSISSSIARIDFAAASVTLLRAYLDANVPFILVNVASNWRAMREWVAPGEEEDFVTIDLLQATFRG-------RDVLVPVVECHSGNRDENDDAVRQQSEVGRGNSKSGTNSMQHAYGEEPRRERTLTEYAALWRSGEAEARRLYMKDWHIVKALRAICKDDHISGVEGTTEQHVHILSSTTTATVRESNNEDNGKGVRPDTAANRNGSTSSSSMTPSNVTEALASFPYYIVPSPLDDDWLNDWWDAPAMDAGHAAREDDFRFLYLGPAGSTTGVHHDVLCSYSWSVNLAGSKEWTLYPPASSPPAPFTTSSTDLPTAEPASMHEGTVPANQRQTQSLGFRPTSTASAPDAVSIASPFFHPGTVPTLVVRQGPGELMFVPSGWHHKVRNLTSCLSINHNWFNRSSLARVWAFLKEEASAVQEKLGHLRETFDEDVGGWERQCEVVLRANSAMNLTEWVGMLMWKAREFRRVGKIVDRDEARQDLEAILGVLREVASAPKLVDFLFPPHLERGNEQAEEGVPAPRLPLRIDLLPSVEAWLAAEIRQIEASLE-LIG 561
            H  +   I   I RI+ A+AS  LLR +LD+N PF++ ++AS W A R WV PGEEE+F T+DL +    G        + LVPVVEC        DD   +  E    ++ +      ++YG E R E   TEYA LWR+GEAEAR LY+KDWHIVK L+ +  D      +   E    I        V  +  +    GV+ +      G+   + ++P+  T   A F    VP PL DDWLN WWDAPA +AGH AREDD+RFLYLGPAG+ TG+H+DVLCSYSWS NLAG+KEWTL  P       F   +  L         + TVP        +  R                           VRQGPGE++FVPSGW H+VRN+T CLSINHNWFNRS L RVW F+KEEASAVQE+L  LRETFD  + GWERQCEVV+RANS++NLTEWV +L+WKAR+ R   K     +AR DL AIL VLREV  + + V+FLFP       E + E +    LPL+ +     E WLAAEI+Q+E   E L+G
Sbjct:   22 HGVSELKIILMIPRIESASASPALLRHFLDSNAPFLITDLASRWEATRAWVVPGEEENFQTLDLFENFICGHNRGELAEETLVPVVEC------PGDDDKHENVEGHHSHTSNSCQDKSNSYGTELRTEMHFTEYARLWRTGEAEARGLYLKDWHIVKVLKGL--DGKHDKQDVREEVKAGIKDGDELCDVLATGKQ----GVQEERHEELVGA-CGAEVSPARPTAPSALFS---VPFPLTDDWLNAWWDAPASEAGHPAREDDYRFLYLGPAGTQTGLHYDVLCSYSWSANLAGTKEWTLIHPDQK---GFLAENLPL---------QSTVPFGSVDWSDVAVR---------------------------VRQGPGEMIFVPSGWFHRVRNVTGCLSINHNWFNRSCLDRVWTFVKEEASAVQERLYDLRETFDASLCGWERQCEVVMRANSSINLTEWVDLLLWKARDLRLRQKDTVAPDARLDLLAILKVLREVQRSERYVNFLFPSRFH--EEPSVENLRPLPLPLQANSPSQTEEWLAAEIQQLEKCAERLVG 524          
BLAST of NO08G04400 vs. NCBI_GenBank
Match: XP_008878937.1 (hypothetical protein H310_13281 [Aphanomyces invadans] >ETV92386.1 hypothetical protein H310_13281 [Aphanomyces invadans])

HSP 1 Score: 206.1 bits (523), Expect = 2.900e-49
Identity = 151/513 (29.43%), Postives = 217/513 (42.30%), Query Frame = 0
Query:   17 SSSIARIDFAAASV-TLLRAYLDANVPFILVNVASNWRAMREWVAPGEEEDFVTIDLLQATFRGRDVLVPVVECHSGNRDENDDAVRQQSEVGRGNSKSGTNSMQHAYGEEPRRERTLTEYAALWRSGEAEARRLYMKDWHIVKALRAICKDDHISGVEGTTEQHVHILSSTTTATVRESNNEDNGKGVRPDTAANRNGSTSSSSMTPSNVTEALASFPYYIVPSPLDDDWLNDWWDAPAMDAGHAAREDDFRFLYLGPAGSTTGVHHDVLCSYSWSVNLAGSKEWTLYPPASSPPAPFTTSSTDLPTAEPASMHEGTVPANQRQTQSLGFRPTSTASAPDAVSIASPFFHPGTVPTLVVRQGPGELMFVPSGWHHKVRNL-TSCLSINHNWFNRSSLARVWAFLKEEASAVQEKLGHLRETFDEDVGGWERQCEVVLRANSAMNLTEWVGMLMWKAREFRRVGKIVDRDEARQDLEAILGVLREVASAPKLVDFLFPPHLERGNEQAEEGVP 528
            ++++ R+D +  S     + Y+  N P ++ N+ ++W   + W   G+  D V +  L+A F   D +VPV                    VG G ++         YG E R   TL  Y AL  SG+AEA++ YMKDWH  +                                              P+TAA                         Y  P    DDWLN WWD P          DD+RF+YLGPAGSTT +HHDVL SYSWS+N+ G KEW L+PP                                 +T  L  R     +       A+ F H  T   + V QG GE +FVPSGW+H+V+NL    LS+NHNWFN  SL ++WAFL+ E +AV+ ++GH R++FD D   W   C+VVLRAN  M+  +   +L  +   +      + R +    ++ I  VL  +++ P           +RG+   +  +P
Sbjct:    4 TAAVPRVDASDLSYDEFCKQYMGPNRPVLITNIGADWPIYQTW-RQGDNGD-VNVAFLRAHF--GDAVVPV--------------------VGYGKTE--------GYGGEDRGTMTLDAYLALLESGKAEAKQQYMKDWHFTRDF--------------------------------------------PETAA-------------------------YTTPIFFQDDWLNWWWDQPT-----TPTRDDYRFVYLGPAGSTTPLHHDVLLSYSWSINICGRKEWLLFPPT--------------------------------ETWKLWDRSGRCTATNATEFDATQFPHLATAHHVRVVQGVGEALFVPSGWYHQVQNLDRDTLSVNHNWFNAYSLEQMWAFLQHELAAVEREIGHCRDSFDSD-DEWLDHCQVVLRANIGMSYVDVAALLRARKAWYLSADDAIRRLDMTYSVQQINKVLEAMSAHPS---------QQRGHPSDDHAIP 368          
BLAST of NO08G04400 vs. NCBI_GenBank
Match: XP_009833971.1 (hypothetical protein H257_09453 [Aphanomyces astaci] >ETV76426.1 hypothetical protein H257_09453 [Aphanomyces astaci])

HSP 1 Score: 192.2 bits (487), Expect = 4.400e-45
Identity = 144/451 (31.93%), Postives = 186/451 (41.24%), Query Frame = 0
Query:   20 IARIDFAAASV-TLLRAYLDANVPFILVNVASNWRAMREWVAPGEEEDFVTIDLLQATFRGRDVLVPVVECHSGNRDENDDAVRQQSEVGRGNSKSGTNSMQHAYGEEPRRERTLTEYAALWRSGEAEARRLYMKDWHIVKALRAICKDDHISGVEGTTEQHVHILSSTTTATVRESNNEDNGKGVRPDTAANRNGSTSSSSMTPSNVTEALASFPYYIVPSPLDDDWLNDWWDAPAMDAGHAAREDDFRFLYLGPAGSTTGVHHDVLCSYSWSVNLAGSKEWTLYPPASSPPAPFTTSSTDLPTAEPASMHEGTVPANQRQTQSLGFRPTSTASAPDAVSI-ASPFFHPGTVPTLVVRQGPGELMFVPSGWHHKVRNLT-SCLSINHNWFNRSSLARVWAFLKEEASAVQEKLGHLRETFDEDVGGWERQCEVVLRANSAMNLTEWVGML 468
            + RID AA S       Y+  N P ++ N+  +W     W     E + V    L+ATF      VPV                    VG G           AYGEE R    L  Y  L  SGEA+A + YMKDWH                                                                      T      P Y  P    DDWLN WWD        A   DD+RF+YLGPA STT +HHDVL SYSWS+N+ G KEW ++PP                                 +T  L  R +   +AP A ++ A+ F +  +   + V Q  GE +FVPSGW+H+VRNL  + LSINHNWFN  SL R+WAF++ E  AV++++ H RETFD D   W   C+V+LRAN  M+  E+  +L
Sbjct:    9 VPRIDAAALSYEAFCELYMAPNRPVLIRNIGLDWPIYHAW--RRSEHNDVNHAYLRATF--GHATVPV--------------------VGYGR--------LDAYGEEDRCTMPLAMYLTLLESGEAQAAQKYMKDWHF---------------------------------------------------------------------TRDFPHGPVYTTPEYFQDDWLNWWWDQ------QADIHDDYRFVYLGPANSTTPLHHDVLLSYSWSINICGKKEWLMFPPT--------------------------------ETWKLRDR-SGRYTAPSANTVDATAFPNVTSARYIKVVQEVGEALFVPSGWYHQVRNLEGTTLSINHNWFNAYSLERMWAFMQAELHAVEQEIDHCRETFDSD-DDWHHHCQVLLRANIGMHFNEFAALL 318          
BLAST of NO08G04400 vs. NCBI_GenBank
Match: OQR82896.1 (hypothetical protein ACHHYP_15372 [Achlya hypogyna])

HSP 1 Score: 173.7 bits (439), Expect = 1.600e-39
Identity = 128/453 (28.26%), Postives = 180/453 (39.74%), Query Frame = 0
Query:   36 YLDANVPFILVNVASNWRAMREWVAPGEEEDFVTIDLLQATFRGRDVLVPVVECHSGNRDENDDAVRQQSEVGRGNSKSGTNSMQHAYGEEPRRERTLTEYAALWRSGEAEARRLYMKDWHIVKALRAICKDDHISGVEGTTEQHVHILSSTTTATVRESNNEDNGKGVRPDTAANRNGSTSSSSMTPSNVTEALASFPYYIVPSPLDDDWLN---------------DWWDAPAMDAGHAAREDDFRFLYLGPAGSTTGVHHDVLCSYSWSVNLAGSKEWTLYPPASSPPAPFTTSSTDLPTAEPASMHEGTVPANQRQTQSLGFRPTSTASAPDAVSIASPFFHPGTVPTLVVRQGPGELMFVPSGWHHKVRNLTSCLSINHNWFNRSSLARVWAFLKEEASAVQEKLGHLRETFDEDVGGWERQCEVVLRANSAMNLTEWVGMLMWKARE 474
            ++  N+P ++ NV SNW  +R+WV       F      +   R   VL PVV   SG ++E                          YG+E R +  +  Y     SG AEA +LY+KDWH                                                                      T    S   Y  P    DDWLN                WWD  A   G  AR DD+RF+YLGP+GS T +HHDV  SYSWS+N++G KEW L+PP+ +P              +       +VP++ RQ  +  +     A A                  L V Q PG  +FVPSGW+H+V N  + LSINHNWFN  +LA +W + + + + V+ ++ H R++FD     W   C+++LRAN  M+  E   +L  +  E
Sbjct:   21 FMAPNLPVLVTNVGSNWPVVRDWVDAQRRLRFE-----ELRDRYGQVLAPVVA--SGAKNE--------------------------YGDETRDDVVVATYLEWLESGRAEAEQLYLKDWHF---------------------------------------------------------------------TRDFPSDDLYSTPEYFADDWLNWCGSKHKCLVIHLWLRWWDRKAR-RGDKAR-DDYRFVYLGPSGSFTPLHHDVFQSYSWSINISGQKEWLLFPPSETP--------------KLLDRLGRSVPSDVRQIDATKYPMAHLAQA------------------LRVLQPPGAALFVPSGWYHQVTNTATTLSINHNWFNAYNLATIWRYFQAQLAEVEREIEHCRDSFD-SAAEWSAHCQLLLRANIGMDYGELHALLQARLTE 336          
BLAST of NO08G04400 vs. NCBI_GenBank
Match: XP_012201393.1 (hypothetical protein SPRG_07214 [Saprolegnia parasitica CBS 223.65] >KDO27938.1 hypothetical protein SPRG_07214 [Saprolegnia parasitica CBS 223.65])

HSP 1 Score: 168.3 bits (425), Expect = 6.700e-38
Identity = 128/438 (29.22%), Postives = 174/438 (39.73%), Query Frame = 0
Query:   36 YLDANVPFILVNVASNWRAMREWVAPGEEEDFVTIDLLQATFRGRDVLVPVVECHSGNRDENDDAVRQQSEVGRGNSKSGTNSMQHAYGEEPRRERTLTEYAALWRSGEAEARRLYMKDWHIVKALRAICKDDHISGVEGTTEQHVHILSSTTTATVRESNNEDNGKGVRPDTAANRNGSTSSSSMTPSNVTEALASFPYYIVPSPLDDDWLNDWWD--APAMDAGHAAREDDFRFLYLGPAGSTTGVHHDVLCSYSWSVNLAGSKEWTLYPPASSPPAPFTTSSTDLPTAEPASMHEGTVPANQRQTQSLGFRPTSTASAPDAVSIASPFFHPGTVPTLVVRQGPGELMFVPSGWHHKVRNLTSCLSINHNWFNRSSLARVWAFLKEEASAVQEKLGHLRETFDEDVGGWERQCEVVLRANSAMNLTEWVGMLMWKA 472
            ++  N P I+ NV ++W A  EW     +   + ++ L A  R    L PVV                      G S          YG+E R +  +  Y     SG+AEA +LY+KDWH  +                                               D   +R                       Y  P    DDWLN WWD  A A+ A      DD+RF+YLGP GS T +HHDV  SYSWS+N+ G KEW L+PP+ +P                            +     G    S     D V     F    T   L V Q PG  +FVPSGW+H+V N  + LSINHNWFN  +L  +WA+ +E+  AV+ ++ H R+ FD D   W   C+++LRAN  M+  E   +L  +A
Sbjct:   24 FMARNRPVIITNVGADWPARVEWC----DRSGLRLETLSA--RYGHALAPVV----------------------GKSTK--------YGDESRDDVAVATYLDWLASGQAEADQLYLKDWHFTR-----------------------------------------------DFPKDR----------------------IYTTPKYFADDWLNWWWDEKAAALSATSVGL-DDYRFVYLGPRGSFTPLHHDVFQSYSWSINMTGQKEWLLFPPSETP----------------------------KLLDKFGRVVLSNFQEIDPVQ----FPRAHTAKHLRVLQPPGAALFVPSGWYHQVTNTATTLSINHNWFNAYNLPLIWAYFQEQLVAVEREIEHCRDGFDSD-SDWILHCQLLLRANIGMDFNELCALLEARA 322          
BLAST of NO08G04400 vs. NCBI_GenBank
Match: XP_008604193.1 (hypothetical protein SDRG_00493 [Saprolegnia diclina VS20] >EQC42770.1 hypothetical protein SDRG_00493 [Saprolegnia diclina VS20])

HSP 1 Score: 166.4 bits (420), Expect = 2.600e-37
Identity = 125/433 (28.87%), Postives = 174/433 (40.18%), Query Frame = 0
Query:   40 NVPFILVNVASNWRAMREWVAPGEEEDFVTIDLLQATFRGRDVLVPVVECHSGNRDENDDAVRQQSEVGRGNSKSGTNSMQHAYGEEPRRERTLTEYAALWRSGEAEARRLYMKDWHIVKALRAICKDDHISGVEGTTEQHVHILSSTTTATVRESNNEDNGKGVRPDTAANRNGSTSSSSMTPSNVTEALASFPYYIVPSPLDDDWLNDWWDAPAMD-AGHAAREDDFRFLYLGPAGSTTGVHHDVLCSYSWSVNLAGSKEWTLYPPASSPPAPFTTSSTDLPTAEPASMHEGTVPANQRQTQSLGFRPTSTASAPDAVSIASPFFHPGTVPTLVVRQGPGELMFVPSGWHHKVRNLTSCLSINHNWFNRSSLARVWAFLKEEASAVQEKLGHLRETFDEDVGGWERQCEVVLRANSAMNLTEWVGMLMWKA 472
            N+P ++ NV ++W A  EW     +   + +++L+A  R    L PVV                      G S          YG+E R +  +  Y     SG AEA +LY+KDWH     R   KD                                                                    Y  P    DDWLN WWD  A      +   DD+RF+YLGP GS T +HHDV  SYSWS+N+ G KEW L+PP+ +P              +        V +N ++   + F    TA                    L V Q PG  +FVPSGW+H+V N  + LSINHNWFN  +L  +WA+ +E+  AV+ ++ H R+ FD D   W   C+++LRAN  M+  E   +L  +A
Sbjct:    4 NLPVVITNVGTDWPARVEWC----DRSGLRLEILKA--RYGHALAPVV----------------------GKSIE--------YGDESRDDVAVATYLDWLASGLAEADQLYLKDWHFT---RDFPKD------------------------------------------------------------------AIYTTPKYFADDWLNWWWDQKAATLPATSVGLDDYRFVYLGPRGSFTPLHHDVFQSYSWSINMTGQKEWLLFPPSETP--------------KLLDKFGRVVLSNFQEIDPVRFPRAHTAK------------------HLRVLQPPGAALFVPSGWYHQVTNTATTLSINHNWFNAYNLPLIWAYFQEQLLAVEREIEHCRDGFDSD-ADWILHCQLLLRANIGMDFKELHALLEARA 298          
BLAST of NO08G04400 vs. NCBI_GenBank
Match: CBJ30422.1 (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 157.9 bits (398), Expect = 9.100e-35
Identity = 100/253 (39.53%), Postives = 129/253 (50.99%), Query Frame = 0
Query:  239 PSPLDDDWLNDWWDAPAMDAGHAAREDDFRFLYLGPAGSTTGVHHDVLCSYSWSVNLAGSKEWTLYPPASSPPAPFTTSSTDLPTAEPASMHEGTVPANQRQTQSLGFRPTSTASAPDAVSIASPFFHPGTVPTLVVRQGPGELMFVPSGWHHKVRNLTS--------CLSINHNWFNRSSLARVWAFLKEEASAVQEKLGHLRETFDEDVGG-----------WERQCEVVLRANSAMNLTEWVGMLMWKAR 473
            PS   DDWLN W D           +DD+RF+Y+GP GS TG+HHDVL S+SWS N+ GSK WTL+P  ++P         DL                 R  + L     S  + PD       F      P L V QGPGE +FVPSGWHH+V N            +S+N NWFN  +L +V AFL  E SAV+  L HLRET     GG           WE QCE+V+RANS+ N+T++  ++  +A+
Sbjct:  135 PSFFRDDWLNWWCDRQG--------QDDYRFVYIGPPGSFTGLHHDVLNSFSWSFNVCGSKHWTLFPTEATP---------DL---------------YDRYGRDLAKDVRSGRADPD------KFPRLDAAPRLEVYQGPGEAIFVPSGWHHQVVNTGDGREGGGGLTVSVNTNWFNGFNLDKVAAFLHSELSAVRAALDHLRETMS---GGXXXXXXXXRREWENQCELVMRANSSFNVTDFARLVTARAQ 346          
BLAST of NO08G04400 vs. NCBI_GenBank
Match: XP_008878941.1 (hypothetical protein, variant 5 [Aphanomyces invadans] >ETV92391.1 hypothetical protein, variant 5 [Aphanomyces invadans])

HSP 1 Score: 156.0 bits (393), Expect = 3.500e-34
Identity = 121/401 (30.17%), Postives = 162/401 (40.40%), Query Frame = 0
Query:   17 SSSIARIDFAAASV-TLLRAYLDANVPFILVNVASNWRAMREWVAPGEEEDFVTIDLLQATFRGRDVLVPVVECHSGNRDENDDAVRQQSEVGRGNSKSGTNSMQHAYGEEPRRERTLTEYAALWRSGEAEARRLYMKDWHIVKALRAICKDDHISGVEGTTEQHVHILSSTTTATVRESNNEDNGKGVRPDTAANRNGSTSSSSMTPSNVTEALASFPYYIVPSPLDDDWLNDWWDAPAMDAGHAAREDDFRFLYLGPAGSTTGVHHDVLCSYSWSVNLAGSKEWTLYPPASSPPAPFTTSSTDLPTAEPASMHEGTVPANQRQTQSLGFRPTSTASAPDAVSIASPFFHPGTVPTLVVRQGPGELMFVPSGWHHKVRNL-TSCLSINHNWFNRSSLARV 416
            ++++ R+D +  S     + Y+  N P ++ N+ ++W   + W   G+  D V +  L+A F   D +VPV                    VG G ++         YG E R   TL  Y AL  SG+AEA++ YMKDWH  +                                              P+TAA                         Y  P    DDWLN WWD P          DD+RF+YLGPAGSTT +HHDVL SYSWS+N+ G KEW L+PP                                 +T  L  R     +       A+ F H  T   + V QG GE +FVPSGW+H+V+NL    LS+NHNWFN  SL +V
Sbjct:    4 TAAVPRVDASDLSYDEFCKQYMGPNRPVLITNIGADWPIYQTW-RQGDNGD-VNVAFLRAHF--GDAVVPV--------------------VGYGKTE--------GYGGEDRGTMTLDAYLALLESGKAEAKQQYMKDWHFTRDF--------------------------------------------PETAA-------------------------YTTPIFFQDDWLNWWWDQPT-----TPTRDDYRFVYLGPAGSTTPLHHDVLLSYSWSINICGRKEWLLFPPT--------------------------------ETWKLWDRSGRCTATNATEFDATQFPHLATAHHVRVVQGVGEALFVPSGWYHQVQNLDRDTLSVNHNWFNAYSLEQV 266          
BLAST of NO08G04400 vs. NCBI_GenBank
Match: ETI38351.1 (hypothetical protein F443_15944 [Phytophthora parasitica P1569] >ETK78505.1 hypothetical protein L915_15499 [Phytophthora parasitica] >ETL31933.1 hypothetical protein L916_15395 [Phytophthora parasitica] >ETM38333.1 hypothetical protein L914_15360 [Phytophthora parasitica] >ETO67121.1 hypothetical protein F444_15928 [Phytophthora parasitica P1976] >ETP08183.1 hypothetical protein F441_15782 [Phytophthora parasitica CJ01A1] >ETP36284.1 hypothetical protein F442_15788 [Phytophthora parasitica P10297])

HSP 1 Score: 155.6 bits (392), Expect = 4.500e-34
Identity = 99/280 (35.36%), Postives = 139/280 (49.64%), Query Frame = 0
Query:  236 YIVPSPLDDDWLNDWWDAPAMDAGHAAR-EDDFRFLYLGPAGSTTGVHHDVLCSYSWSVNLAGSKEWTLYPPASSPPAPFTTSSTDLPTAEPASMHEGTVPANQRQTQSLGFRPTSTASAPDAVSIASPFFHPGTVPTLVVRQGPGELMFVPSGWHHKVRNLTSCLSINHNWFNRSSLARVWAFLKEEASAVQEKLGHLRETFDEDVGGWE--RQCEVVLRANSAMNLTEWVGMLMWKAREFRRVGKIVDRDEARQDLEAILG----VLREVASAPKLVD 509
            Y+ P    DDWLN WWD       H  + E D+RF+YLGP GS T +HHDV  SYSWSVN+ G K+W  Y P   P          +P    A++ +   P                             FH      +   Q  G+ +FVPSGW+H+V NL   +SINHNWFN  ++  +W FLK E SAV+ +L  L+E     + G E   QC++V+ AN+ +N  E+  +L  KA +F R  +  +     +DL   LG    +L+E+ +A K+VD
Sbjct:  112 YVTPPLFKDDWLNWWWD-------HKEKSESDYRFVYLGPTGSWTPLHHDVFRSYSWSVNVCGRKKWIFYHPDDEPKLKDRFGRFVVPDVTVANIDKEQYPQ----------------------------FH--EAKPMYAIQETGDAVFVPSGWYHQVENLEDTISINHNWFNGYNVRELWGFLKREYSAVELELEDLKEM---GLVGREFVEQCQLVMLANAGINYLEFRELLYAKASDFLRKREHPEDRNVGRDLPVHLGYVRDILQELNAALKVVD 351          
The following BLAST results are available for this feature:
BLAST of NO08G04400 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
XP_005852702.14.000e-11545.18jmjc domain-containing 4-like protein, partial [Na... [more]
EWM26897.14.000e-11545.18jmjc domain-containing protein 4 [Nannochloropsis ... [more]
XP_008878937.12.900e-4929.43hypothetical protein H310_13281 [Aphanomyces invad... [more]
XP_009833971.14.400e-4531.93hypothetical protein H257_09453 [Aphanomyces astac... [more]
OQR82896.11.600e-3928.26hypothetical protein ACHHYP_15372 [Achlya hypogyna... [more]
XP_012201393.16.700e-3829.22hypothetical protein SPRG_07214 [Saprolegnia paras... [more]
XP_008604193.12.600e-3728.87hypothetical protein SDRG_00493 [Saprolegnia dicli... [more]
CBJ30422.19.100e-3539.53conserved unknown protein [Ectocarpus siliculosus][more]
XP_008878941.13.500e-3430.17hypothetical protein, variant 5 [Aphanomyces invad... [more]
ETI38351.14.500e-3435.36hypothetical protein F443_15944 [Phytophthora para... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL105nonsL105Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR141ngnoR141Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK006524NSK006524Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO08G04400.1NO08G04400.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
Naga_100103g14gene3634Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO08G04400.1NO08G04400.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO08G04400 ID=NO08G04400|Name=NO08G04400|organism=Nannochloropsis oceanica|type=gene|length=1686bp
ATGCCTCCACCAGACCCCTCAGACCACGATACCGCCAACACAAGCATAAG
CAGCAGCATTGCTCGCATCGACTTTGCGGCCGCCAGCGTGACGCTTCTGC
GTGCCTACCTTGACGCCAACGTCCCCTTTATTCTCGTGAATGTGGCCAGC
AACTGGAGAGCCATGCGCGAATGGGTTGCTCCAGGAGAAGAGGAGGACTT
TGTCACCATTGATTTGCTCCAAGCCACATTTCGCGGGCGCGATGTGCTGG
TGCCTGTGGTGGAGTGCCACAGCGGGAATAGAGACGAAAACGACGACGCC
GTAAGGCAGCAATCGGAAGTTGGGAGGGGTAATAGCAAAAGCGGCACCAA
TAGCATGCAGCATGCATACGGAGAGGAGCCGCGAAGGGAGCGGACGTTGA
CCGAGTATGCAGCGCTGTGGCGGAGTGGGGAGGCGGAAGCTCGGAGATTG
TATATGAAAGACTGGCATATTGTCAAGGCGTTGCGGGCTATATGCAAAGA
TGACCACATTAGTGGCGTTGAAGGGACCACGGAGCAACATGTTCACATTT
TGTCATCTACCACCACGGCCACTGTCAGGGAATCGAATAACGAGGACAAT
GGAAAAGGTGTACGGCCTGATACCGCAGCCAACAGAAACGGCAGCACTAG
CAGCAGCAGCATGACCCCCTCGAACGTGACCGAGGCCCTAGCGTCGTTTC
CATACTATATTGTACCCTCACCCTTAGACGATGATTGGTTGAATGACTGG
TGGGATGCCCCAGCCATGGATGCCGGCCACGCTGCCCGAGAGGACGACTT
CCGGTTCCTGTATCTGGGACCTGCGGGTTCGACCACGGGCGTGCATCACG
ACGTGCTCTGCTCATACTCTTGGTCGGTCAACCTGGCTGGTAGCAAGGAA
TGGACTCTCTACCCCCCTGCTTCCTCACCACCTGCACCCTTCACGACTTC
TAGCACCGACTTGCCGACGGCAGAACCAGCATCCATGCACGAGGGAACTG
TGCCAGCAAATCAGAGGCAGACGCAGTCGCTCGGTTTCCGACCTACAAGC
ACGGCAAGCGCACCTGACGCGGTGAGCATTGCCTCTCCTTTTTTTCACCC
GGGCACTGTCCCCACCCTCGTAGTACGACAAGGACCCGGGGAACTGATGT
TCGTTCCTTCCGGATGGCATCACAAGGTGCGGAACCTTACGAGCTGCCTA
TCCATCAATCACAACTGGTTCAATCGCAGCAGTCTGGCGCGGGTGTGGGC
CTTCCTGAAAGAAGAGGCCTCGGCGGTGCAGGAAAAGCTGGGACACCTGC
GAGAGACGTTCGACGAAGACGTCGGTGGCTGGGAGCGGCAATGCGAAGTG
GTTCTACGAGCCAATAGTGCCATGAACCTGACAGAATGGGTAGGGATGCT
CATGTGGAAAGCTCGAGAGTTTAGGCGAGTGGGAAAGATCGTAGACAGGG
ATGAAGCCCGTCAAGACCTGGAGGCCATCCTCGGCGTGCTGAGGGAGGTG
GCATCGGCACCAAAATTGGTCGACTTTTTGTTCCCGCCGCATTTGGAGAG
GGGAAATGAACAGGCAGAGGAAGGGGTGCCAGCGCCGCGTTTGCCCTTGC
GAATAGACTTGCTGCCTAGTGTGGAGGCCTGGCTTGCGGCGGAGATACGT
CAGATAGAGGCGAGTTTGGAGCTGATAGGGATGTAG
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protein sequence of NO08G04400.1

>NO08G04400.1-protein ID=NO08G04400.1-protein|Name=NO08G04400.1|organism=Nannochloropsis oceanica|type=polypeptide|length=562bp
MPPPDPSDHDTANTSISSSIARIDFAAASVTLLRAYLDANVPFILVNVAS
NWRAMREWVAPGEEEDFVTIDLLQATFRGRDVLVPVVECHSGNRDENDDA
VRQQSEVGRGNSKSGTNSMQHAYGEEPRRERTLTEYAALWRSGEAEARRL
YMKDWHIVKALRAICKDDHISGVEGTTEQHVHILSSTTTATVRESNNEDN
GKGVRPDTAANRNGSTSSSSMTPSNVTEALASFPYYIVPSPLDDDWLNDW
WDAPAMDAGHAAREDDFRFLYLGPAGSTTGVHHDVLCSYSWSVNLAGSKE
WTLYPPASSPPAPFTTSSTDLPTAEPASMHEGTVPANQRQTQSLGFRPTS
TASAPDAVSIASPFFHPGTVPTLVVRQGPGELMFVPSGWHHKVRNLTSCL
SINHNWFNRSSLARVWAFLKEEASAVQEKLGHLRETFDEDVGGWERQCEV
VLRANSAMNLTEWVGMLMWKAREFRRVGKIVDRDEARQDLEAILGVLREV
ASAPKLVDFLFPPHLERGNEQAEEGVPAPRLPLRIDLLPSVEAWLAAEIR
QIEASLELIGM*
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Synonyms
Publications