NO08G04380, NO08G04380 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO08G04380 vs. NCBI_GenBank
Match: XP_005853540.1 (hypothetical protein NGA_0432801 [Nannochloropsis gaditana CCMP526] >EKU22819.1 hypothetical protein NGA_0432801 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 231.5 bits (589), Expect = 3.400e-57 Identity = 114/219 (52.05%), Postives = 155/219 (70.78%), Query Frame = 0 Query: 78 SPPQLSLISSVQS----VVSQVQDYIHHMPRWQYRCMLTSIFLLALALIMVLLSSVLYGFNMHHPHVQVVDVQLLYPFPFADASGNIPVASTMLFSNRNPFPAVTKPTDIHIYALPSRSPASLLGTTSMPGFELAAHEQRRALNSTLSIRDIGSVDGGQALVKAVLEGENNFMYATSVGDITVKVLGLIPISRSYKNECTVLKKWGADSFTMSDCYGHF 293 +P Q+ L+SS+ S VV VQDY+HHMP+WQYR +L ++ +L ++L++VL SVLYGFNM PH++V +V+L P P D++G+IP+ ST+LFSN N F + + I IYALPSRSP SLL T+ LA HE+ + + +++D+GS+DGG A V AVLEG+N +Y TS ITVK LGLIP SR++K ECTVL+KWG + T+SDCYG F Sbjct: 87 TPSQIHLMSSMHSQVVNVVHHVQDYLHHMPKWQYRLLLCTVIILFVSLVLVLTVSVLYGFNMALPHIRVTNVRLALPPPHVDSAGHIPIVSTILFSNPNSFFTTSSLSPIRIYALPSRSPESLLALTAPRTIRLAGHEEGYSFDVNFTLKDVGSIDGGNATVAAVLEGQNCLLYTTSTSKITVKGLGLIPTSRNFKVECTVLRKWGENPLTLSDCYGRF 305
BLAST of NO08G04380 vs. NCBI_GenBank
Match: EWM26903.1 (hypothetical protein Naga_100103g11 [Nannochloropsis gaditana]) HSP 1 Score: 181.4 bits (459), Expect = 4.000e-42 Identity = 92/210 (43.81%), Postives = 135/210 (64.29%), Query Frame = 0 Query: 83 SLISSVQSVVSQVQDYIHHMPRWQYRCMLTSIFLLALALIMVLLSSVLYGFNMHHPHVQVVDVQLLYPFPFADASGNIPVASTMLFSNRNPFPAVTKPTDIHIYALPSRSPASLLGTTSMPGFELAAHEQRRALNSTLSIRDIGSVDGGQALVKAVLEGENNFMYATSVGDITVKVLGLIPISRSYKNECTVLKKWGADSFTMSDCYGHF 293 SL SSV+S+V Q+ ++++ MP+W+YR M++SI +L ++ +++L SV+YGF M PH++VV V ++ P P G++PV S M +N N F + PTDI +Y+ P+RSP SLLG +++P L A E S +RD+GS++GG L +AVL G F Y + ++TV LG + I R+Y ECTVLK WG D +SDCYG F Sbjct: 172 SLHSSVRSIVGQIGNHLYQMPKWKYRLMVSSIVVLLISFLLLLFVSVVYGFGMSLPHIEVVAVDVVLPLP---PDGSLPVRSLMRVNNPNRFSILVHPTDISVYSHPTRSPGSLLGVSTIPEHLLHAREGAHTTESVFVVRDLGSIEGGPDLAEAVLTGGPTFFYTRAKAELTVMSLGFMSIGRAYILECTVLKYWGKD-ILLSDCYGRF 377
BLAST of NO08G04380 vs. NCBI_GenBank
Match: EWM26900.1 (hypothetical protein Naga_100103g12 [Nannochloropsis gaditana]) HSP 1 Score: 160.6 bits (405), Expect = 7.300e-36 Identity = 82/167 (49.10%), Postives = 116/167 (69.46%), Query Frame = 0 Query: 78 SPPQLSLISSVQS----VVSQVQDYIHHMPRWQYRCMLTSIFLLALALIMVLLSSVLYGFNMHHPHVQVVDVQLLYPFPFADASGNIPVASTMLFSNRNPFPAVTKPTDIHIYALPSRSPASLLGTTSMPGFELAAHEQRRALNSTLSIRDIGSVDGGQALVKAVLE 241 +P Q+ L+SS+ S VV VQDY+HHMP+WQYR +L ++ +L ++L++VL SVLYGFNM PH++V +V+L P P D++G+IP+ ST+LFSN N F + + I IYALPSRSP SLL T+ LA HE+ + + +++D+GS+DGG A V AVLE Sbjct: 87 TPSQIHLMSSMHSQVVNVVHHVQDYLHHMPKWQYRLLLCTVIILFVSLVLVLTVSVLYGFNMALPHIRVTNVRLALPPPHVDSAGHIPIVSTILFSNPNSFFTTSSLSPIRIYALPSRSPESLLALTAPRTIRLAGHEEGYSFDVNFTLKDVGSIDGGNATVAAVLE 253
BLAST of NO08G04380 vs. NCBI_GenBank
Match: XP_005853541.1 (hypothetical protein NGA_0432901 [Nannochloropsis gaditana CCMP526] >EKU22820.1 hypothetical protein NGA_0432901 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 148.7 bits (374), Expect = 2.900e-32 Identity = 94/273 (34.43%), Postives = 136/273 (49.82%), Query Frame = 0 Query: 83 SLISSVQSVVSQVQDYIHHMPRWQYRCMLTSIFLLALALIMVLLSSVLYGFNMHHPHVQVVDVQLLYPFPFADASGNIPVASTMLFSNRNPF--------------------------PAV---------TKPTDIHIYALPSRSPASLLGTTSMPGFELAAHEQRRALNSTLSIRDIGSVD----------------------------GGQALVKAVLEGENNFMYATSVGDITVKVLGLIPISRSYKNECTVLKKWGADSFTMSDCYGHF 293 SL SSV+S+V Q+ ++++ MP+W+YR M++SI +L ++ +++L SV+YGF M PH++VV V ++ P P G++PV S M +N N F P V PTDI +Y+ P+RSP SLLG +++P L A E S +RD+GS++ GG L +AVL G F Y + ++TV LG + I R+Y ECTVLK WG D +SDCYG F Sbjct: 141 SLHSSVRSIVGQIGNHLYQMPKWKYRLMVSSIVVLLISFLLLLFVSVVYGFGMSLPHIEVVAVDVVLPLP---PDGSLPVRSLMRVNNPNRFSILHSPARNLGSGTLSQLTRFRRMLAPRVRLPFLVSGQVHPTDISVYSHPTRSPGSLLGVSTIPEHLLHAREGAHTTESVFVVRDLGSIEKSFGLSFRIDGEGRRVDVRFSYLSHPSQGGPDLAEAVLTGGPTFFYTRAKAELTVMSLGFMSIGRAYILECTVLKYWGKD-ILLSDCYGRF 409
BLAST of NO08G04380 vs. NCBI_GenBank
Match: EWM26901.1 (hypothetical protein Naga_100103g12 [Nannochloropsis gaditana]) HSP 1 Score: 137.9 bits (346), Expect = 5.100e-29 Identity = 68/140 (48.57%), Postives = 97/140 (69.29%), Query Frame = 0 Query: 101 HMPRWQYRCMLTSIFLLALALIMVLLSSVLYGFNMHHPHVQVVDVQLLYPFPFADASGNIPVASTMLFSNRNPFPAVTKPTDIHIYALPSRSPASLLGTTSMPGFELAAHEQRRALNSTLSIRDIGSVDGGQALVKAVLE 241 H P+WQYR +L ++ +L ++L++VL SVLYGFNM PH++V +V+L P P D++G+IP+ ST+LFSN N F + + I IYALPSRSP SLL T+ LA HE+ + + +++D+GS+DGG A V AVLE Sbjct: 22 HRPKWQYRLLLCTVIILFVSLVLVLTVSVLYGFNMALPHIRVTNVRLALPPPHVDSAGHIPIVSTILFSNPNSFFTTSSLSPIRIYALPSRSPESLLALTAPRTIRLAGHEEGYSFDVNFTLKDVGSIDGGNATVAAVLE 161
BLAST of NO08G04380 vs. NCBI_GenBank
Match: EWM26904.1 (hypothetical protein Naga_100103g11 [Nannochloropsis gaditana]) HSP 1 Score: 122.1 bits (305), Expect = 2.900e-24 Identity = 61/147 (41.50%), Postives = 97/147 (65.99%), Query Frame = 0 Query: 83 SLISSVQSVVSQVQDYIHHMPRWQYRCMLTSIFLLALALIMVLLSSVLYGFNMHHPHVQVVDVQLLYPFPFADASGNIPVASTMLFSNRNPFPAVTKPTDIHIYALPSRSPASLLGTTSMPGFELAAHEQRRALNSTLSIRDIGSVD 230 SL SSV+S+V Q+ ++++ MP+W+YR M++SI +L ++ +++L SV+YGF M PH++VV V ++ P P G++PV S M +N N F + PTDI +Y+ P+RSP SLLG +++P L A E S +RD+GS++ Sbjct: 48 SLHSSVRSIVGQIGNHLYQMPKWKYRLMVSSIVVLLISFLLLLFVSVVYGFGMSLPHIEVVAVDVVLPLP---PDGSLPVRSLMRVNNPNRFSILVHPTDISVYSHPTRSPGSLLGVSTIPEHLLHAREGAHTTESVFVVRDLGSIE 191
BLAST of NO08G04380 vs. NCBI_GenBank
Match: EWM29974.1 (hypothetical protein Naga_100383g2 [Nannochloropsis gaditana]) HSP 1 Score: 112.5 bits (280), Expect = 2.300e-21 Identity = 67/234 (28.63%), Postives = 115/234 (49.15%), Query Frame = 0 Query: 68 EASTDEGSCPSPPQLSLISSVQSVVSQVQDYIHHMPRWQYRCMLTSIFLLALALIMVLLSSVLYGFNMHHPHVQVVDVQLLYPFPFADASGNIPVASTMLFSNRNPFPAVTKPTDI---HIYALPSRSPASLLGTTSMPGFELAAHEQRRALNSTLSIRDIGSVDGGQALVKAVLEGENNFMYATSVGDITVKVLGLIPISRSYKNECTVLKKWG------ADSFTMSDCYGHF 293 +A G P S SV SV+S ++ +HH+PRW+YR + S+ L + L ++L S++YGF + + H+ V L P DA GN P+ +T+ N N FP +++ ++ + L + +P +L A + L + + + + G+A++ AVL+G F+ A + + V+ LG I I R ++ +C+V WG T+SDC+G F Sbjct: 97 QAQNSTGVPLRAPSFSTTQSVHSVMSDIRSRLHHLPRWKYRFLCASLLLAVILLGLLLCVSIVYGFGLKYVHLSVTGTTPLAP-NLVDAEGNAPMRATISLDNPNSFPITASASEVVLSYMNRTDGGQQYTPLASAPLPRIQLHARHKDCMLTTDFVLAHLPTKPEGKAIMGAVLQGRATFLNAAATLRLHVRALGFIRIVRRFEIDCSVATLWGEPTKADGSKDTVSDCFGAF 329 The following BLAST results are available for this feature:
BLAST of NO08G04380 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 7
Relationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO08G04380 ID=NO08G04380|Name=NO08G04380|organism=Nannochloropsis oceanica|type=gene|length=1543bpback to top protein sequence of NO08G04380.1 >NO08G04380.1-protein ID=NO08G04380.1-protein|Name=NO08G04380.1|organism=Nannochloropsis oceanica|type=polypeptide|length=294bpback to top Synonyms
Publications
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