NO08G04280, NO08G04280 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO08G04280 vs. NCBI_GenBank
Match: XP_006800760.1 (PREDICTED: fucose mutarotase-like [Neolamprologus brichardi]) HSP 1 Score: 167.2 bits (422), Expect = 4.100e-38 Identity = 89/150 (59.33%), Postives = 112/150 (74.67%), Query Frame = 0 Query: 1 MTVLKRIPKVLSPRLLHVLASMGHGDEIVLADANFPAASIASHTPGGLVNADGNDIPTLLDAIMQLLPLDETAP-PAMVMGMMPEHTAAGWKTPIWDEYKKILAHAEGRDIALEGIERFAFYARSKQAFAVVATGETALYGNLILKKGVI 150 M VL+ IP VLSP LL+ LA MGHGDE+VLADANFPA+SI + P + ADG IP L++A+++LLPLD P PA VM ++ G P+WD YK++L+ A G ++LE +ERFAFY R+K+A+AVVATGETALYGNLILKKGVI Sbjct: 1 MVVLRGIPSVLSPELLYALAKMGHGDELVLADANFPASSICACGPKE-IRADGLGIPRLMEAVLKLLPLDTYVPSPAAVMDLVDSDKQRGLAVPVWDTYKQLLSQA-GSQVSLEKVERFAFYERAKKAYAVVATGETALYGNLILKKGVI 148
BLAST of NO08G04280 vs. NCBI_GenBank
Match: XP_004555951.1 (fucose mutarotase isoform X1 [Maylandia zebra] >XP_005743976.1 PREDICTED: fucose mutarotase isoform X1 [Pundamilia nyererei] >XP_005940755.1 PREDICTED: fucose mutarotase isoform X1 [Haplochromis burtoni]) HSP 1 Score: 165.6 bits (418), Expect = 1.200e-37 Identity = 88/150 (58.67%), Postives = 112/150 (74.67%), Query Frame = 0 Query: 1 MTVLKRIPKVLSPRLLHVLASMGHGDEIVLADANFPAASIASHTPGGLVNADGNDIPTLLDAIMQLLPLDETAP-PAMVMGMMPEHTAAGWKTPIWDEYKKILAHAEGRDIALEGIERFAFYARSKQAFAVVATGETALYGNLILKKGVI 150 M VL+ IP VLSP LL+ LA MGHGDE+VLADANFPA+SI + P + ADG IP L++A+++LLPLD P PA VM ++ G P+WD Y+++L+ A G ++LE +ERFAFY R+K+A+AVVATGETALYGNLILKKGVI Sbjct: 1 MVVLRGIPSVLSPELLYALAKMGHGDELVLADANFPASSICACGPKE-IRADGLGIPRLMEAVLKLLPLDTYVPSPAAVMDLVDSDKQRGLAVPVWDTYEQLLSQA-GSQVSLEKVERFAFYERAKKAYAVVATGETALYGNLILKKGVI 148
BLAST of NO08G04280 vs. NCBI_GenBank
Match: XP_009050293.1 (hypothetical protein LOTGIDRAFT_201494 [Lottia gigantea] >ESO99013.1 hypothetical protein LOTGIDRAFT_201494 [Lottia gigantea]) HSP 1 Score: 165.2 bits (417), Expect = 1.600e-37 Identity = 84/146 (57.53%), Postives = 107/146 (73.29%), Query Frame = 0 Query: 4 LKRIPKVLSPRLLHVLASMGHGDEIVLADANFPAASIASHTPGGLVNADGNDIPTLLDAIMQLLPLDE-TAPPAMVMGMMPEHTAAGWKTPIWDEYKKILAHAEGRDIALEGIERFAFYARSKQAFAVVATGETALYGNLILKKGV 149 LK+IP V+SP LLHVLA MGHGD+IV ADA+FP+ S+A LV DG IP LL+ +++L PLD A PA VM +P G K P+WD+Y++I+ AEG++I+ E IERF FY R+K+AFAVV TGETA+YGNLILKKG+ Sbjct: 3 LKKIPNVISPDLLHVLAQMGHGDDIVFADAHFPSNSVAKAQGAILVRCDGLSIPPLLEGVLELFPLDPYVAQPAGVMDPVPSDKEKGIKVPVWDKYQEIINKAEGKEISFEKIERFEFYERAKKAFAVVHTGETAIYGNLILKKGL 148
BLAST of NO08G04280 vs. NCBI_GenBank
Match: XP_022060971.1 (fucose mutarotase [Acanthochromis polyacanthus]) HSP 1 Score: 163.7 bits (413), Expect = 4.500e-37 Identity = 90/150 (60.00%), Postives = 110/150 (73.33%), Query Frame = 0 Query: 1 MTVLKRIPKVLSPRLLHVLASMGHGDEIVLADANFPAASIASHTPGGLVNADGNDIPTLLDAIMQLLPLDETAP-PAMVMGMMPEHTAAGWKTPIWDEYKKILAHAEGRDIALEGIERFAFYARSKQAFAVVATGETALYGNLILKKGVI 150 M VL+ +P VLSP LL+ LA MGHGDEIVLADANFPA+SI + P + ADG IP LL+AI++LLPLD P PA VM ++ P+W+ Y+++L+HA G LE +ERFAFY R+K+AFAVVATGETALYGNLILKKGVI Sbjct: 1 MVVLRGVPSVLSPELLYALAKMGHGDEIVLADANFPASSICACGPKE-IRADGLGIPQLLEAILKLLPLDTHVPCPAAVMDLVDSDKQRCLAVPVWETYRELLSHA-GSQSPLEVVERFAFYERAKKAFAVVATGETALYGNLILKKGVI 148
BLAST of NO08G04280 vs. NCBI_GenBank
Match: XP_023266361.1 (fucose mutarotase [Seriola lalandi dorsalis]) HSP 1 Score: 163.7 bits (413), Expect = 4.500e-37 Identity = 89/150 (59.33%), Postives = 107/150 (71.33%), Query Frame = 0 Query: 1 MTVLKRIPKVLSPRLLHVLASMGHGDEIVLADANFPAASIASHTPGGLVNADGNDIPTLLDAIMQLLPLDETAP-PAMVMGMMPEHTAAGWKTPIWDEYKKILAHAEGRDIALEGIERFAFYARSKQAFAVVATGETALYGNLILKKGVI 150 M VL+ IP VLSP LL+ LA MGHGDE+VLADANFP++SI +H P + ADG IP LL+AI++LLPLD P PA VM ++ P+WD Y ++L A G LE +ERF FY R+K+AFAVVATGETALYGNLILKKGVI Sbjct: 1 MVVLRGIPSVLSPELLYALAKMGHGDELVLADANFPSSSICAHGPKE-IRADGVGIPQLLEAILKLLPLDTYVPSPAAVMDLVDSDKQRSLAVPVWDTYTQLLGQA-GSQTPLEKVERFVFYERAKKAFAVVATGETALYGNLILKKGVI 148
BLAST of NO08G04280 vs. NCBI_GenBank
Match: XP_019808423.1 (PREDICTED: fucose mutarotase [Bos indicus] >DAA14828.1 TPA: protein fucU homolog [Bos taurus]) HSP 1 Score: 162.5 bits (410), Expect = 1.000e-36 Identity = 89/150 (59.33%), Postives = 109/150 (72.67%), Query Frame = 0 Query: 1 MTVLKRIPKVLSPRLLHVLASMGHGDEIVLADANFPAASIASHTPGGLVNADGNDIPTLLDAIMQLLPLDE-TAPPAMVMGMMPEHTAAGWKTPIWDEYKKILAHAEGRDIALEGIERFAFYARSKQAFAVVATGETALYGNLILKKGVI 150 M VLK +P +LSP LL LA MGHGDEIVLAD NFP++SI P + ADG IP LL+A++QLLPLD PAMVM ++P +G TP+W Y+ IL+ A G + +L +ERFAFY R+K+AFAVVATGETALYGNLILKKGV+ Sbjct: 1 MVVLKGVPALLSPELLFALARMGHGDEIVLADVNFPSSSICRGGPEE-IRADGLGIPQLLEAVLQLLPLDTYVQSPAMVMELVPSDRKSGLLTPVWTSYQSILSRA-GYEFSLGMVERFAFYERAKKAFAVVATGETALYGNLILKKGVL 148
BLAST of NO08G04280 vs. NCBI_GenBank
Match: XP_022618691.1 (fucose mutarotase [Seriola dumerili]) HSP 1 Score: 162.5 bits (410), Expect = 1.000e-36 Identity = 88/150 (58.67%), Postives = 107/150 (71.33%), Query Frame = 0 Query: 1 MTVLKRIPKVLSPRLLHVLASMGHGDEIVLADANFPAASIASHTPGGLVNADGNDIPTLLDAIMQLLPLDETAP-PAMVMGMMPEHTAAGWKTPIWDEYKKILAHAEGRDIALEGIERFAFYARSKQAFAVVATGETALYGNLILKKGVI 150 M VL+ IP VLSP LL+ LA MGHGDE+VLADANFP++SI +H P + ADG IP LL+AI++LLPLD P PA VM ++ P+WD Y ++L A G LE +ERF FY R+K+A+AVVATGETALYGNLILKKGVI Sbjct: 1 MVVLRGIPSVLSPELLYALAKMGHGDELVLADANFPSSSICAHGPKE-IRADGVGIPQLLEAILKLLPLDTYVPSPAAVMDLVDSDKQRSLAVPVWDTYTQLLGQA-GSQTPLEKVERFVFYERAKKAYAVVATGETALYGNLILKKGVI 148
BLAST of NO08G04280 vs. NCBI_GenBank
Match: NP_001004530.1 (fucose mutarotase [Danio rerio] >Q7ZZ03.1 RecName: Full=Fucose mutarotase >AAH81387.1 Si:ch211-217g15.2 [Danio rerio]) HSP 1 Score: 162.2 bits (409), Expect = 1.300e-36 Identity = 87/149 (58.39%), Postives = 107/149 (71.81%), Query Frame = 0 Query: 1 MTVLKRIPKVLSPRLLHVLASMGHGDEIVLADANFPAASIASHTPGGLVNADGNDIPTLLDAIMQLLPLDETAPPAMVMGMMPEHTAAGWKTPIWDEYKKILAHAEGRDIALEGIERFAFYARSKQAFAVVATGETALYGNLILKKGVI 150 M +LK IP VL+P LL+VLA MGHGDE+VLADANFP +S+ P + ADG IP LL AI++L PLD A VM ++P G K PIWD+Y ++L A G D ++ +ERFAFY R+K+AFAVVATGETALYGNLI+KKGVI Sbjct: 1 MVILKGIPSVLTPELLYVLAQMGHGDELVLADANFPTSSVCKCGPVE-IRADGVRIPELLKAILKLFPLDTYDESAAVMDLVPSDLLKGLKVPIWDQYSELLKQA-GSDGNMKPVERFAFYERAKKAFAVVATGETALYGNLIIKKGVI 147
BLAST of NO08G04280 vs. NCBI_GenBank
Match: XP_020735686.1 (fucose mutarotase [Odocoileus virginianus texanus]) HSP 1 Score: 162.2 bits (409), Expect = 1.300e-36 Identity = 90/150 (60.00%), Postives = 108/150 (72.00%), Query Frame = 0 Query: 1 MTVLKRIPKVLSPRLLHVLASMGHGDEIVLADANFPAASIASHTPGGLVNADGNDIPTLLDAIMQLLPLDE-TAPPAMVMGMMPEHTAAGWKTPIWDEYKKILAHAEGRDIALEGIERFAFYARSKQAFAVVATGETALYGNLILKKGVI 150 M VLK +P +LSP LL LA MGHGDEIVLAD NFP++SI P + ADG +P LL+A++QLLPLD PAMVM +MP G TP+W Y+ ILA A G + +L +ERFAFY R+K+AFAVVATGETALYGNLILKKGV+ Sbjct: 1 MVVLKGVPALLSPELLFALARMGHGDEIVLADVNFPSSSICRGGPEE-IRADGLGVPQLLEAVLQLLPLDTYVESPAMVMELMPSDRKRGLLTPVWTSYQSILAKA-GYEGSLGMVERFAFYERAKKAFAVVATGETALYGNLILKKGVL 148
BLAST of NO08G04280 vs. NCBI_GenBank
Match: XP_023145348.1 (fucose mutarotase [Amphiprion ocellaris]) HSP 1 Score: 161.8 bits (408), Expect = 1.700e-36 Identity = 90/150 (60.00%), Postives = 109/150 (72.67%), Query Frame = 0 Query: 1 MTVLKRIPKVLSPRLLHVLASMGHGDEIVLADANFPAASIASHTPGGLVNADGNDIPTLLDAIMQLLPLDETAP-PAMVMGMMPEHTAAGWKTPIWDEYKKILAHAEGRDIALEGIERFAFYARSKQAFAVVATGETALYGNLILKKGVI 150 M VL+ IP VLSP LL+ LA MGHGDEI+LADANFPA+SI + P + ADG IP LL+AI++LLPLD P PA VM ++ P+W+ Y+++L HA G LE +ERFAFY R+K+AFAVVATGETALYGNLILKKGVI Sbjct: 1 MVVLRGIPSVLSPELLYALAKMGHGDEIMLADANFPASSICACGPKE-IRADGLGIPQLLEAILKLLPLDTYVPCPAAVMDLVDSDKQRCLAVPVWETYRELLNHA-GSQSPLEMVERFAFYERAKKAFAVVATGETALYGNLILKKGVI 148 The following BLAST results are available for this feature:
BLAST of NO08G04280 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO08G04280 ID=NO08G04280|Name=NO08G04280|organism=Nannochloropsis oceanica|type=gene|length=1173bpback to top protein sequence of NO08G04280.3 >NO08G04280.3-protein ID=NO08G04280.3-protein|Name=NO08G04280.3|organism=Nannochloropsis oceanica|type=polypeptide|length=97bpback to top protein sequence of NO08G04280.2 >NO08G04280.2-protein ID=NO08G04280.2-protein|Name=NO08G04280.2|organism=Nannochloropsis oceanica|type=polypeptide|length=97bpback to top protein sequence of NO08G04280.1 >NO08G04280.1-protein ID=NO08G04280.1-protein|Name=NO08G04280.1|organism=Nannochloropsis oceanica|type=polypeptide|length=154bpback to top Synonyms
Publications
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