NO08G04280, NO08G04280 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO08G04280 vs. NCBI_GenBank
Match: EWM26898.1 (fucose mutarotase-like protein [Nannochloropsis gaditana]) HSP 1 Score: 259.2 bits (661), Expect = 7.900e-66 Identity = 128/152 (84.21%), Postives = 140/152 (92.11%), Query Frame = 0 Query: 1 MTVLKRIPKVLSPRLLHVLASMGHGDEIVLADANFPAASIASHTPGGLVNADGNDIPTLLDAIMQLLPLDETAPPAMVMGMMPEHTAAGWKTPIWDEYKKILAHAEGRDIALEGIERFAFYARSKQAFAVVATGETALYGNLILKKGVIGTS 153 MTVLKRIPKVLSPRLLHVLASMGHGDEIVLADANFPAASIASHTPGGLVN+DGNDIPTLL AIMQLLPLDETAPPAMVM MMP H A GWKT IWD YK+I++ EGR++AL +ERF FY+RSKQA+AV+ATGETALYGNLILKKGVIG++ Sbjct: 1 MTVLKRIPKVLSPRLLHVLASMGHGDEIVLADANFPAASIASHTPGGLVNSDGNDIPTLLTAIMQLLPLDETAPPAMVMEMMPVHQALGWKTQIWDTYKEIVSEGEGRNVALTTVERFEFYSRSKQAYAVIATGETALYGNLILKKGVIGST 152
BLAST of NO08G04280 vs. NCBI_GenBank
Match: XP_004990568.1 (RbsD or FucU transporter [Salpingoeca rosetta] >EGD77224.1 RbsD or FucU transporter [Salpingoeca rosetta]) HSP 1 Score: 190.7 bits (483), Expect = 3.500e-45 Identity = 93/152 (61.18%), Postives = 116/152 (76.32%), Query Frame = 0 Query: 1 MTVLKRIPKVLSPRLLHVLASMGHGDEIVLADANFPAASIASHTPGGLVNADGNDIPTLLDAIMQLLPLDETAPPAMVMGMMPEHTAAGWKTPIWDEYKKILAHAEGRDIALEGIERFAFYARSKQAFAVVATGETALYGNLILKKGVIGTS 153 MTVLK IP +L P LL LA MGHGDE+VLADANFPA S+ + TP ++ D +P LL AI++LLPLDET+ P +M +MPEH AAGW+TPIW++Y+ I+A E R + E +ERFAFY R+K+AF VVATGE ALY NLILKKGVIG++ Sbjct: 1 MTVLKGIPSILPPELLLALAKMGHGDELVLADANFPAESVGASTPCSVIRCDALGMPELLSAILKLLPLDETSCPCALMDLMPEHKAAGWQTPIWEQYRAIVAENEKRTVDFELVERFAFYERAKKAFVVVATGEQALYANLILKKGVIGST 152
BLAST of NO08G04280 vs. NCBI_GenBank
Match: XP_001744656.1 (hypothetical protein [Monosiga brevicollis MX1] >EDQ90605.1 predicted protein [Monosiga brevicollis MX1]) HSP 1 Score: 186.4 bits (472), Expect = 6.500e-44 Identity = 90/152 (59.21%), Postives = 110/152 (72.37%), Query Frame = 0 Query: 1 MTVLKRIPKVLSPRLLHVLASMGHGDEIVLADANFPAASIASHTPGGLVNADGNDIPTLLDAIMQLLPLDETAPPAMVMGMMPEHTAAGWKTPIWDEYKKILAHAEGRDIALEGIERFAFYARSKQAFAVVATGETALYGNLILKKGVIGTS 153 MT+LK IPK+L P LL LA MGHGDE+VL DANFP+ S+ +HTP ++ D LL AI+Q+LPLD T P +M MM H AAGWKTPIWDEYK + AEGR I E +ERFAFY R+K+A+ VVATGE A Y N+ILKKG+IG++ Sbjct: 1 MTILKGIPKILPPELLFALAKMGHGDELVLGDANFPSESVGAHTPCNVIRCDALGAVDLLKAILQVLPLDTTCGPCALMEMMDMHKAAGWKTPIWDEYKAAVKEAEGRTIDFEEVERFAFYERAKKAYVVVATGEEAFYANIILKKGIIGST 152
BLAST of NO08G04280 vs. NCBI_GenBank
Match: XP_003385545.1 (PREDICTED: fucose mutarotase-like isoform X2 [Amphimedon queenslandica]) HSP 1 Score: 183.0 bits (463), Expect = 7.200e-43 Identity = 97/150 (64.67%), Postives = 114/150 (76.00%), Query Frame = 0 Query: 1 MTVLKRIPKVLSPRLLHVLASMGHGDEIVLADANFPAASIASHTPGGLVNADGNDIPTLLDAIMQLLPLDETAP-PAMVMGMMPEHTAAGWKTPIWDEYKKILAHAEGRDIALEGIERFAFYARSKQAFAVVATGETALYGNLILKKGVI 150 M +LK IP++++P LL VLA MGHGDEIVLADANFP+ASI H P L+ ADG+ IP LL AI LLPLD P PAM+M ++ AG KTPIW++YK IL AEG+DI E IERFAFY R+K AFAVVATGE ALYGN+ILKKGV+ Sbjct: 1 MVILKGIPRIINPSLLSVLARMGHGDEIVLADANFPSASICRHGP-ELIRADGHAIPPLLKAITSLLPLDTYVPRPAMLMELVHNDKKAGLKTPIWEQYKSILQQAEGKDIGFEMIERFAFYERAKTAFAVVATGEEALYGNVILKKGVL 149
BLAST of NO08G04280 vs. NCBI_GenBank
Match: XP_022080570.1 (fucose mutarotase-like isoform X1 [Acanthaster planci]) HSP 1 Score: 181.4 bits (459), Expect = 2.100e-42 Identity = 96/154 (62.34%), Postives = 118/154 (76.62%), Query Frame = 0 Query: 1 MTVLKRIPKVLSPRLLHVLASMGHGDEIVLADANFPAASIASHTPGGLVNADGNDIPTLLDAIMQLLPLDETAP-PAMVMGMMPEHTAAGWKTPIWDEYKKILAHAEGRDIALEGIERFAFYARSKQAFAVVATGETALYGNLILKKGVIGTSK 154 M VLK IP++LSP LLHVLA MGHGDEIVLADANFP++SI P + ADG+ IP LL+AI+QLLPLD P PAMVM ++ EH A T +WD+++ +L AEG+ + +E IERFAFY R+K+AFAVVATGE ALYGNLILKKGVI + + Sbjct: 1 MVVLKGIPRILSPELLHVLAQMGHGDEIVLADANFPSSSICGAGPKE-IRADGHGIPELLEAILQLLPLDAFVPSPAMVMELVDEHKKAKLPTLVWDKFQALLDAAEGKTVKIEQIERFAFYERAKKAFAVVATGEKALYGNLILKKGVISSGQ 153
BLAST of NO08G04280 vs. NCBI_GenBank
Match: ACO51623.1 (fucU homolog [Rana catesbeiana]) HSP 1 Score: 172.2 bits (435), Expect = 1.300e-39 Identity = 94/150 (62.67%), Postives = 110/150 (73.33%), Query Frame = 0 Query: 1 MTVLKRIPKVLSPRLLHVLASMGHGDEIVLADANFPAASIASHTPGGLVNADGNDIPTLLDAIMQLLPLDETAP-PAMVMGMMPEHTAAGWKTPIWDEYKKILAHAEGRDIALEGIERFAFYARSKQAFAVVATGETALYGNLILKKGVI 150 M VLK IP VLSP LL+ LA MGHGDEIVLADANFP +SI+ P L+ ADG IP LL+AI+QL P+D P PA VM ++ G K P+WDEYKK+L A G + LE +ERF+FY R+K AFAVVATGETALYGNLILKKGV+ Sbjct: 1 MVVLKGIPSVLSPELLYTLARMGHGDEIVLADANFPVSSISRSGP-ELIRADGLGIPRLLEAILQLFPMDTYVPEPAAVMDLVDSDKEKGLKVPVWDEYKKLLCKA-GCEAPLEKVERFSFYERAKNAFAVVATGETALYGNLILKKGVL 148
BLAST of NO08G04280 vs. NCBI_GenBank
Match: XP_021378658.1 (fucose mutarotase-like [Mizuhopecten yessoensis] >OWF38304.1 Fucose mutarotase [Mizuhopecten yessoensis]) HSP 1 Score: 170.6 bits (431), Expect = 3.700e-39 Identity = 90/147 (61.22%), Postives = 109/147 (74.15%), Query Frame = 0 Query: 4 LKRIPKVLSPRLLHVLASMGHGDEIVLADANFPAASIASHTPGGLVNADGNDIPTLLDAIMQLLPLDETAP-PAMVMGMMPEHTAAGWKTPIWDEYKKILAHAEGRDIALEGIERFAFYARSKQAFAVVATGETALYGNLILKKGVI 150 LK IP VLSP LLHVLASMGHGDE+VLADANFP AS+ P V ADG DIPTL+DAI+QLLPLD P +M ++P G +TP+W++Y I EG+ I ++ +ERFAFY R+K+AFAVV TGETALYGN+ILKKGV+ Sbjct: 3 LKLIPNVLSPNLLHVLASMGHGDELVLADANFPTASVCKSGPIE-VRADGIDIPTLMDAILQLLPLDTYVDRPIALMDLVPSDKQRGLQTPVWEKYMTIARKHEGKTIDVQLVERFAFYERAKKAFAVVHTGETALYGNIILKKGVV 148
BLAST of NO08G04280 vs. NCBI_GenBank
Match: XP_019626459.1 (PREDICTED: fucose mutarotase-like [Branchiostoma belcheri]) HSP 1 Score: 169.9 bits (429), Expect = 6.300e-39 Identity = 92/150 (61.33%), Postives = 112/150 (74.67%), Query Frame = 0 Query: 1 MTVLKRIPKVLSPRLLHVLASMGHGDEIVLADANFPAASIASHTPGGLVNADGNDIPTLLDAIMQLLPLDE-TAPPAMVMGMMPEHTAAGWKTPIWDEYKKILAHAEGRDIALEGIERFAFYARSKQAFAVVATGETALYGNLILKKGVI 150 M VLK IP++LSP LL+VLA MGHGDEIVLADANFP +S+ S P V ADG+ IP LL A++QLLP+D PA VM ++P G KTP+WD Y+++L + G LE +ERFAFY R+K+AFAVVATGETALYGN+ILKKGVI Sbjct: 1 MVVLKGIPRILSPELLYVLARMGHGDEIVLADANFPTSSVCSSGP-IQVRADGHSIPDLLKAVLQLLPMDTYVESPAAVMDLVPGDKEKGLKTPVWDTYRELLKES-GCTAPLEQVERFAFYDRAKKAFAVVATGETALYGNIILKKGVI 148
BLAST of NO08G04280 vs. NCBI_GenBank
Match: XP_018419608.1 (PREDICTED: fucose mutarotase isoform X1 [Nanorana parkeri]) HSP 1 Score: 167.9 bits (424), Expect = 2.400e-38 Identity = 92/150 (61.33%), Postives = 109/150 (72.67%), Query Frame = 0 Query: 1 MTVLKRIPKVLSPRLLHVLASMGHGDEIVLADANFPAASIASHTPGGLVNADGNDIPTLLDAIMQLLPLDETAP-PAMVMGMMPEHTAAGWKTPIWDEYKKILAHAEGRDIALEGIERFAFYARSKQAFAVVATGETALYGNLILKKGVI 150 M VLK IP VLSP LL+ LA MGHGDEIVLADANFP +SI+ P L+ ADG IP LL+AI+QL P+D P PA VM ++ G P+WDEYK++L A G + L+ +ERF+FY R+K AFAVVATGETALYGNLILKKGVI Sbjct: 1 MVVLKGIPSVLSPELLYTLARMGHGDEIVLADANFPVSSISRSGP-ELIRADGLGIPRLLEAILQLFPMDTYVPEPAAVMDLVDSDKEKGLTVPVWDEYKRLLCKA-GCEAPLKKVERFSFYERAKNAFAVVATGETALYGNLILKKGVI 148
BLAST of NO08G04280 vs. NCBI_GenBank
Match: XP_002607906.1 (hypothetical protein BRAFLDRAFT_114228 [Branchiostoma floridae] >EEN63916.1 hypothetical protein BRAFLDRAFT_114228 [Branchiostoma floridae]) HSP 1 Score: 167.5 bits (423), Expect = 3.100e-38 Identity = 93/150 (62.00%), Postives = 109/150 (72.67%), Query Frame = 0 Query: 1 MTVLKRIPKVLSPRLLHVLASMGHGDEIVLADANFPAASIASHTPGGLVNADGNDIPTLLDAIMQLLPLDE-TAPPAMVMGMMPEHTAAGWKTPIWDEYKKILAHAEGRDIALEGIERFAFYARSKQAFAVVATGETALYGNLILKKGVI 150 M VLK IP++LSP LL VLA MGHGDEIV ADANFP +SI S P V ADG+ IP LL A+++LLPLD PA VM ++P G KTP+WD Y+ +L A G LE +ERFAFY R+K+AFAVVATGETALYGN+ILKKGVI Sbjct: 1 MVVLKGIPRILSPELLFVLARMGHGDEIVFADANFPTSSICSSGPIE-VRADGHCIPALLKAVLELLPLDTYVESPAAVMDLVPGDKEKGLKTPVWDTYRGLLKEA-GSTTPLEQVERFAFYERAKKAFAVVATGETALYGNIILKKGVI 148 The following BLAST results are available for this feature:
BLAST of NO08G04280 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO08G04280 ID=NO08G04280|Name=NO08G04280|organism=Nannochloropsis oceanica|type=gene|length=1173bpback to top protein sequence of NO08G04280.3 >NO08G04280.3-protein ID=NO08G04280.3-protein|Name=NO08G04280.3|organism=Nannochloropsis oceanica|type=polypeptide|length=97bpback to top protein sequence of NO08G04280.2 >NO08G04280.2-protein ID=NO08G04280.2-protein|Name=NO08G04280.2|organism=Nannochloropsis oceanica|type=polypeptide|length=97bpback to top protein sequence of NO08G04280.1 >NO08G04280.1-protein ID=NO08G04280.1-protein|Name=NO08G04280.1|organism=Nannochloropsis oceanica|type=polypeptide|length=154bpback to top Synonyms
Publications
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