NO08G04150, NO08G04150 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO08G04150 vs. NCBI_GenBank
Match: XP_005854949.1 (hypothetical protein NGA_0359401 [Nannochloropsis gaditana CCMP526] >EKU21412.1 hypothetical protein NGA_0359401 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 262.7 bits (670), Expect = 1.300e-66 Identity = 120/205 (58.54%), Postives = 161/205 (78.54%), Query Frame = 0 Query: 61 LKEEIKALQQKFDVLQRRFWLEPLEPIWQYRGKFYLGKTKDVEDKDQVTPFLLANFVDASNKTLYRRRIYIDLGIKDFNSSLCWMMQNYPIKFDAMYGFECERDM-TNVATLRDPINRCISETAAEKMGYTTEGTMDTLKVYHNFIGLDEDLETSPQTRGLSQFLKDIDIQEDDFVVLKMDVEGIEFSLLERMMANGTYKLIDEV 265 LKEE++ L+ K ++ +RRFWL+PLEPI+QYR KF+LGKT DV+DKDQVTP+ LANFV+AS+K +Y RRIYIDLG+ DF SS+CWMMQNYP KFD +YGFE + + ++ TL I C+ T+AE GY T ++T Y+NF+G +++ ++SP TRGLSQF++DI I+E+DFVVLKMDVEG E+ +L R+M +GTYK +DEV Sbjct: 53 LKEEVQKLKAKVEIHERRFWLDPLEPIFQYRPKFWLGKTDDVDDKDQVTPYFLANFVNASDKNVYDRRIYIDLGLHDFKSSVCWMMQNYPTKFDLVYGFEADAKLHADIHTLASNITECVKGTSAEARGYKTHEVLNTFTFYYNFVGAEDNNKSSPPTRGLSQFVRDIGIKENDFVVLKMDVEGWEYDILSRIMDDGTYKFLDEV 257
BLAST of NO08G04150 vs. NCBI_GenBank
Match: EWM20773.1 (Methyltransferase FkbM [Nannochloropsis gaditana]) HSP 1 Score: 262.7 bits (670), Expect = 1.300e-66 Identity = 121/209 (57.89%), Postives = 163/209 (77.99%), Query Frame = 0 Query: 57 SIPKLKEEIKALQQKFDVLQRRFWLEPLEPIWQYRGKFYLGKTKDVEDKDQVTPFLLANFVDASNKTLYRRRIYIDLGIKDFNSSLCWMMQNYPIKFDAMYGFECERDM-TNVATLRDPINRCISETAAEKMGYTTEGTMDTLKVYHNFIGLDEDLETSPQTRGLSQFLKDIDIQEDDFVVLKMDVEGIEFSLLERMMANGTYKLIDEV 265 +I LKEE++ L+ K ++ +RRFWL+PLEPI+QYR KF+LGKT DV+DKDQVTP+ LANFV+AS+K +Y RRIYIDLG+ DF SS+CWMMQNYP KFD +YGFE + + ++ TL I C+ T+AE GY T ++T Y+NF+G +++ ++SP TRGLSQF++DI I+E+DFVVLKMDVEG E+ +L R+M +GTYK +DEV Sbjct: 57 TIRDLKEEVQKLKAKVEIHERRFWLDPLEPIFQYRPKFWLGKTDDVDDKDQVTPYFLANFVNASDKNVYDRRIYIDLGLHDFKSSVCWMMQNYPTKFDLVYGFEADGALHADIHTLASNITECVKGTSAEARGYKTHEVLNTFTFYYNFVGAEDNNKSSPPTRGLSQFVRDIGIKENDFVVLKMDVEGWEYDILSRVMDDGTYKFLDEV 265
BLAST of NO08G04150 vs. NCBI_GenBank
Match: XP_005853913.1 (hypothetical protein NGA_0460801 [Nannochloropsis gaditana CCMP526] >EKU22448.1 hypothetical protein NGA_0460801 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 250.4 bits (638), Expect = 6.500e-63 Identity = 114/186 (61.29%), Postives = 148/186 (79.57%), Query Frame = 0 Query: 53 SSSDSIPKLKEEIKALQQKFDVLQRRFWLEPLEPIWQYRGKFYLGKTKDVEDKDQVTPFLLANFVDASNKTLYRRRIYIDLGIKDFNSSLCWMMQNYPIKFDAMYGFECERDMTNVATLRDPINRCISETAAE-KMGYTTEGTMDTLKVYHNFIGLDEDLETSPQTRGLSQFLKDIDIQEDDFVVL 238 SS S L E ++A+++ VLQ+RFW EPLEPIWQYRGK+YLGKT D+EDKDQVTPF LANFV+AS+ +Y+R+IYIDLGIKDF SSLCW+MQNYP+KFDA++GFEC D++NVA L I+ C+ TAA+ K GYT EG + L +Y+N+IG DE+ T P TRGLSQ +KD++I++DD+VV+ Sbjct: 51 SSVKSSQSLYERMQAVEENMKVLQKRFWQEPLEPIWQYRGKYYLGKTNDIEDKDQVTPFFLANFVNASDPAVYKRKIYIDLGIKDFYSSLCWIMQNYPVKFDAIHGFECASDLSNVAALSSQIDACVRGTAADLKQGYTPEGVKEILHIYYNYIGTDENPATQPPTRGLSQVMKDLNIEKDDYVVV 236
BLAST of NO08G04150 vs. NCBI_GenBank
Match: EWM22800.1 (hypothetical protein Naga_100178g4 [Nannochloropsis gaditana]) HSP 1 Score: 243.0 bits (619), Expect = 1.000e-60 Identity = 109/164 (66.46%), Postives = 137/164 (83.54%), Query Frame = 0 Query: 74 VLQRRFWLEPLEPIWQYRGKFYLGKTKDVEDKDQVTPFLLANFVDASNKTLYRRRIYIDLGIKDFNSSLCWMMQNYPIKFDAMYGFECERDMTNVATLRDPINRCISETAAE-KMGYTTEGTMDTLKVYHNFIGLDEDLETSPQTRGLSQFLKDIDIQEDDFVV 237 VLQ+RFW EPLEPIWQYRGK+YLGKT DVEDKDQVTPF LANFV+AS+ +Y+R+IYIDLGIKDF SSLCW+MQNYP+KFDA++GFEC D++NVA L I+ C+ E+AA+ K GYT EG D L +Y+++IG DE+ T P TRGLSQ +KD++I++DD+VV Sbjct: 3 VLQKRFWQEPLEPIWQYRGKYYLGKTNDVEDKDQVTPFFLANFVNASDPAVYKRKIYIDLGIKDFYSSLCWIMQNYPVKFDAIHGFECASDLSNVAALSSQIDACVRESAADLKQGYTPEGVKDILHIYYDYIGTDENPATQPPTRGLSQVMKDLNIEKDDYVV 166
BLAST of NO08G04150 vs. NCBI_GenBank
Match: ABK20978.1 (unknown [Picea sitchensis]) HSP 1 Score: 93.6 bits (231), Expect = 1.000e-15 Identity = 60/197 (30.46%), Postives = 108/197 (54.82%), Query Frame = 0 Query: 81 LEPLEPIWQYRGKFYLGKTKDVEDKDQVTPFLLANFVDASNKTLYRRRIYIDLGIKDFNSSLCWMMQNYPIKFDAMYGFECERDMTNVATLRDPINRCISETAAEKMG----YTTEGT-------MDTLKVYHNFIGLDEDLETSPQTRGLSQFLK-DIDIQEDDFVVLKMDVEGIEFSLLERMMANGTY-KLIDEV 265 ++ L+ +R F LG T DVED+ + P++LA+ +D + + RR++ID+G FN+S+ W M+ YP F ++ FE +N L+ P +R E A G Y T+ T +D + +YH +G ++D+ + +++F+K ++ ++ D VV+K+D+EG E+ L R + + K+IDE+ Sbjct: 105 IDKLDDWRNFRRGFTLGFTPDVEDRTHILPWILASKIDLNQR---ERRVFIDVGANYFNTSVTWFMRMYPCDFTEIHAFE-----SNAQLLQKP-SRGFDEEANSVEGNPWSYMTKVTPEAPQWMLDRINIYHKMVGDEDDIANN--AINITRFIKEELQLKPTDTVVVKIDIEGGEWPTLRRWINDPDMPKIIDEL 290
BLAST of NO08G04150 vs. NCBI_GenBank
Match: XP_024359293.1 (uncharacterized protein LOC112274233 [Physcomitrella patens] >PNR59386.1 hypothetical protein PHYPA_002177 [Physcomitrella patens]) HSP 1 Score: 93.2 bits (230), Expect = 1.300e-15 Identity = 58/190 (30.53%), Postives = 106/190 (55.79%), Query Frame = 0 Query: 81 LEPLEPIWQYRGKFYLGKTKDVEDKDQVTPFLLANFVDASNKTLYRRRIYIDLGIKDFNSSLCWMMQNYPIKFDAMYGFECERDMTNVATL-RDPINRCISETAA---EKMGYTTEGTMDTLKVYHNFIGLDEDLETSPQTRGLSQFLKD-IDIQEDDFVVLKMDVEGIEFSLLERMMANGTY-KLIDEV 265 +E L+ ++ +R + L DVEDK + P+LL N VD + L RRR+ +DLG F++S+ W + YP F ++ FE +R++ + N +A+ + +D +K+Y+ F+ +D T+ +++F+ + +D++ D VV+KMD+EG E+S+L+R MAN +++DE+ Sbjct: 170 IEALDDVYNFRRGYALKYVADVEDKTHILPWLLGNRVDLN---LPRRRVLMDLGGNRFDTSVTWFNRMYPCDFTEVHVFEIDRNLFKFPKEDHEEFNGPFQNSASIMVRNAPPIPKWMIDRMKLYNVFVSDGDDPSTN--ALNITRFMTETLDLKAADTVVVKMDIEGSEWSILKRWMANPEIPRIVDEL 354
BLAST of NO08G04150 vs. NCBI_GenBank
Match: XP_024367822.1 (uncharacterized protein LOC112278488 [Physcomitrella patens] >PNR26386.1 hypothetical protein PHYPA_030961 [Physcomitrella patens]) HSP 1 Score: 92.8 bits (229), Expect = 1.700e-15 Identity = 57/190 (30.00%), Postives = 97/190 (51.05%), Query Frame = 0 Query: 81 LEPLEPIWQYRGKFYLGKTKDVEDKDQVTPFLLANFVDASNKTLYRRRIYIDLGIKDFNSSLCWMMQNYPIKFDAMYGFECERDMTNVATLR-DPINRCISETAAEKMGYTTEGT----MDTLKVYHNFIGLDEDLETSPQTRGLSQFLKDIDIQEDDFVVLKMDVEGIEFSLLERMMAN-GTYKLIDEV 265 +E L+P +R F L T DVEDK + P+L VD + + RR+Y+DLG F +S+ W Q YP F ++ FE + + + + + E + T G +D +K Y+ F+ +D +++ TR + + D+ + DD VV+KMD+EG E+ +L+R + + +IDE+ Sbjct: 110 IEALDPRNNFRRGFSLKFTSDVEDKTAILPWLYGAKVDLNKRA---RRVYLDLGANSFRTSVTWFSQMYPCDFTEIHAFEVSPQLFKIPSSGFNEETNWVPENSHATRVKTAPGVPNWMLDRIKTYNTFVSDGDDEKSTNITRFIKE---DLQLTADDAVVVKMDIEGAEWPILKRWLLDLEMANIIDEL 293
BLAST of NO08G04150 vs. NCBI_GenBank
Match: PNR47747.1 (hypothetical protein PHYPA_012220 [Physcomitrella patens]) HSP 1 Score: 91.7 bits (226), Expect = 3.800e-15 Identity = 57/190 (30.00%), Postives = 100/190 (52.63%), Query Frame = 0 Query: 81 LEPLEPIWQYRGKFYLGKTKDVEDKDQVTPFLLANFVDASNKTLYRRRIYIDLGIKDFNSSLCWMMQNYPIKFDAMYGFECERDMTNVAT--LRDPINRCISETAAEKMGYT---TEGTMDTLKVYHNFIGLDEDLETSPQTRGLSQFLKDIDIQEDDFVVLKMDVEGIEFSLLERMMANGTY-KLIDEV 265 +E L+P+ +R F L DVEDK V P+L V+ + K +RR+Y+D G DF +S+ W +Q YP F ++ +E + N+ + + N A ++ T ++ + +K Y F+ D+ + TR + + LK + E+D VV+KMD+EG E+ +L+R + + ++IDE+ Sbjct: 115 IESLDPLNNFRRGFALKFVSDVEDKTLVLPWLYGTKVNLNTK---QRRVYLDFGANDFRTSVTWFLQMYPCDFTEVHAWEVNPGLFNIPSPGFNEDTNWIPENPHATRVIQTPKVSDWMVQRIKQYSTFVSDDDGKGSVNITRFMKEELK---LAEEDTVVVKMDIEGAEWPILQRWLNDPEMAQIIDEL 298
BLAST of NO08G04150 vs. NCBI_GenBank
Match: OAE21832.1 (hypothetical protein AXG93_138s1030 [Marchantia polymorpha subsp. ruderalis]) HSP 1 Score: 91.3 bits (225), Expect = 5.000e-15 Identity = 53/173 (30.64%), Postives = 91/173 (52.60%), Query Frame = 0 Query: 81 LEPLEPIWQYRGKFYLGKTKDVEDKDQVTPFLLANFVDASNKTLYRRRIYIDLGIKDFNSSLCWMMQNYPIKFDAMYGFECERDMTNVATLRDPINRCISETAAEKM----GYTTEGTMDTLKVYHNFIGLDEDLETSPQTRGLSQFLKDIDIQEDDFVVLKMDVEGIEFSLL 250 +E L+P+ YR LG T D++DK Q+ + L D NK +RR++IDLG +F +S W MQ YP F ++ FE + ++ T D I E K+ G+ ++ + Y+ + G+ +++ TR + + LK + +D V++KMD+EG E+++L Sbjct: 233 IERLDPLNNYRRGVALGFTTDLDDKTQIEQWFLGTKEDL-NKA--KRRVFIDLGANEFTTSFLWFMQRYPCDFTEIHAFEADPNLFKFPTGWDEEANWIQEPGWGKVKSRAGFVPSWLLERIHYYNKYAGVVDNVSAVNITRFMKEELK---LTPEDTVIVKMDIEGAEWNIL 399
BLAST of NO08G04150 vs. NCBI_GenBank
Match: PTQ29575.1 (hypothetical protein MARPO_0138s0015 [Marchantia polymorpha]) HSP 1 Score: 91.3 bits (225), Expect = 5.000e-15 Identity = 53/173 (30.64%), Postives = 91/173 (52.60%), Query Frame = 0 Query: 81 LEPLEPIWQYRGKFYLGKTKDVEDKDQVTPFLLANFVDASNKTLYRRRIYIDLGIKDFNSSLCWMMQNYPIKFDAMYGFECERDMTNVATLRDPINRCISETAAEKM----GYTTEGTMDTLKVYHNFIGLDEDLETSPQTRGLSQFLKDIDIQEDDFVVLKMDVEGIEFSLL 250 +E L+P+ YR LG T D++DK Q+ + L D NK +RR++IDLG +F +S W MQ YP F ++ FE + ++ T D I E K+ G+ ++ + Y+ + G+ +++ TR + + LK + +D V++KMD+EG E+++L Sbjct: 123 IERLDPLNNYRRGVALGFTTDLDDKTQIEQWFLGTKEDL-NKA--KRRVFIDLGANEFTTSFLWFMQRYPCDFTEIHAFEADPNLFKFPTGWDEEANWIQEPGWGKVKSRAGFVPSWLLERIHYYNKYAGVVDNVSAVNITRFMKEELK---LTPEDTVIVKMDIEGAEWNIL 289 The following BLAST results are available for this feature:
BLAST of NO08G04150 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
The following gene feature(s) are orthologous to this gene:
The following polypeptide feature(s) derives from this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO08G04150 ID=NO08G04150|Name=NO08G04150|organism=Nannochloropsis oceanica|type=gene|length=1940bpback to top protein sequence of NO08G04150.1 >NO08G04150.1-protein ID=NO08G04150.1-protein|Name=NO08G04150.1|organism=Nannochloropsis oceanica|type=polypeptide|length=309bpback to top protein sequence of NO08G04150.2 >NO08G04150.2-protein ID=NO08G04150.2-protein|Name=NO08G04150.2|organism=Nannochloropsis oceanica|type=polypeptide|length=309bpback to top protein sequence of NO08G04150.3 >NO08G04150.3-protein ID=NO08G04150.3-protein|Name=NO08G04150.3|organism=Nannochloropsis oceanica|type=polypeptide|length=270bpback to top Synonyms
Publications
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