NO08G04030, NO08G04030 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO08G04030 vs. NCBI_GenBank
Match: EWM26859.1 (hypothetical protein Naga_100097g2 [Nannochloropsis gaditana]) HSP 1 Score: 193.4 bits (490), Expect = 1.300e-45 Identity = 101/126 (80.16%), Postives = 108/126 (85.71%), Query Frame = 0 Query: 247 GEVGGVDADFTKLDLSFNPFLSRNLELLSEEVDRMAGQLEKIKRFATGQGGRGGYHQREHRSWGKRREEEEERNAEPNRVETVMTATQIDAYCSQISSFSKSGVSKLYLVGSLHKEAGVEGREGDK 373 G G +DADFTKLDLSFNPFLSRNLELLSEEVDRM+GQLEK KRFATGQGGRG YH RSW +R+EEEEERNAEPNR++TVMTATQIDAYC QIS+FSK G SKLYLVGSLHKEA G EG K Sbjct: 117 GGEGALDADFTKLDLSFNPFLSRNLELLSEEVDRMSGQLEKCKRFATGQGGRGSYHGGP-RSWSRRKEEEEERNAEPNRLDTVMTATQIDAYCQQISAFSKGGFSKLYLVGSLHKEASPAGGEGGK 241
BLAST of NO08G04030 vs. NCBI_GenBank
Match: CBJ25972.1 (eukaryotic initiation factor 3H1 subunit [Ectocarpus siliculosus]) HSP 1 Score: 181.4 bits (459), Expect = 5.100e-42 Identity = 125/363 (34.44%), Postives = 187/363 (51.52%), Query Frame = 0 Query: 18 LISEVQIDGAALLRIVKHCEDNLPGASTGALLGLDVPKENGKMVMQVTYAFALPRGRDAGYQDERPGHNRQXXXXXXXXXXXXXXXXXXXXXMKMLKEVNVDSNMVGWYRTMQLGHFSEGGSKVDASGLRAQRTLFDVPPALVDEMAETNIVLLYDPVQTAMGDLTVKAYRHLRT--PTTREEVEGVVSFKDLLEEIPVVIRNAGIVSAFLWDMQQETTPVAAAPAAATRQGEVGGVDADFTKLDLSFNPFLSRNLELLSEEVDRMAGQLEKIKRFATG------------QGGRGGYHQREHRSWGKRREEE---EERNAEPNRVETVMTATQIDAYCSQISSFSKSGVSKLYLVGSLHKEA 364 LI+EV IDG A+L+I+KHC ++LP G+LLGLD + G V++VT+AF P A D +P MKML+EVNVD+N VG+Y++M LG F +TL D + + +++ ++V+LYDPVQT+ G LT+KAYR + RE+ V+ ++LEE+P+ IRN GI++A ++D+Q+E VD DF +LDLS NP+L +NLE L +D ++ + +K ++ Q EE+ +++ PNR+E ++ + QI AYCSQI+ F+ S KL+L GSL KEA Sbjct: 20 LITEVHIDGLAVLKIIKHCTESLPQMVAGSLLGLD---QTG--VLEVTHAFPFPTA--AAGPDGQPA------------PEDMDGQDYQMEMMKMLREVNVDNNCVGFYQSMYLGSF-------------CTQTLIDNQFSYQENLSDNSVVILYDPVQTSNGQLTIKAYRLSKAFMRVYREKKNEVIKPSEILEELPIKIRNPGIINALIFDLQEEDR-----------------VDCDFDRLDLSTNPYLEKNLEFLCNWIDDLSNEQQKFNQYTRNVARQKQDQARLLQXXXXXXXXXXXXXXEALPEEDSALDKKLDAPNRMEGLLISNQISAYCSQINKFAGSSFEKLFLAGSLQKEA 333
BLAST of NO08G04030 vs. NCBI_GenBank
Match: XP_002291153.1 (predicted protein [Thalassiosira pseudonana CCMP1335] >EED91260.1 predicted protein [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 156.0 bits (393), Expect = 2.300e-34 Identity = 113/371 (30.46%), Postives = 181/371 (48.79%), Query Frame = 0 Query: 19 ISEVQIDGAALLRIVKHCEDNLPGASTGALLGLDVPKENGKMVMQVTYAFALPRGRD------------AGYQDER---PGHNRQXXXXXXXXXXXXXXXXXXXXXMKMLKEVNVDSNMVGWYRTMQLGHFSEGGSKVDASGLRAQRTLFDVPPALVDEMAETNIVLLYDPVQTAMGDLTVKAYRHLRTPTTREEVE-------GVVSFKDLLEEIPVVIRNAGIVSAFLWDMQQETTPVAAAPAAATRQGEVGGVDADFTKLDLSFNPFLSRNLELLSEEVDRMAGQLEKIKRFATGQGGRGGYHQREHRSWGKRREEEEE---RNAEPNRVETVMTATQIDAYCSQISSFSKSGVSKLYLVGSLHKEAG 365 ++ V+++G A L+I+KHC+++LP TG+LLGL + E+G V+++T+AF P D A DE GH Q MKML+EVNVD+N VGWY++M LG +S +L + + +++ +V+LYDP+QTA G+L +K YR T E V+ ++ + + EE+PV + N G+V + L D+ + E G D F +LDLS NP+L ++LE L VD +A + K + + G +++ ++ + + EE R+ P R+E+++ + QI YC Q+ F+ G KL+L LH E G Sbjct: 11 VTSVKLEGLAALKIIKHCQESLPTMVTGSLLGLMI--EDG--VLEITHAFPFPEPLDDKGDIVKTAEEAANADDEAAALDGHEFQ------------------LEMMKMLREVNVDNNCVGWYQSMYLGSYSTS-------------SLLENQLSYQTDLSPNAVVILYDPMQTAHGNLVLKCYR-----LTEEAVQLKQSGKNNYINPRKIFEEVPVTLSNPGLVRSLLRDV--------GDGLHGSYDAEGTGADTTFDRLDLSTNPYLEKHLEFLCSWVDDLAAEQYKFQHYTRSLRSSVGDNRKGRKAKEEMAQAIEEGWTRSEAPKRMESLLMSNQIRTYCDQVEKFTGDGFGKLFLTSGLHTEEG 333
BLAST of NO08G04030 vs. NCBI_GenBank
Match: EJK59967.1 (hypothetical protein THAOC_19753 [Thalassiosira oceanica]) HSP 1 Score: 153.7 bits (387), Expect = 1.100e-33 Identity = 109/364 (29.95%), Postives = 177/364 (48.63%), Query Frame = 0 Query: 19 ISEVQIDGAALLRIVKHCEDNLPGASTGALLGLDVPKENGKMVMQVTYAFALPR-----------GRDAGYQDER---PGHNRQXXXXXXXXXXXXXXXXXXXXXMKMLKEVNVDSNMVGWYRTMQLGHFSEGGSKVDASGLRAQRTLFDVPPALVDEMAETNIVLLYDPVQTAMGDLTVKAYRHLRTPTTREEVEGVVSF---KDLLEEIPVVIRNAGIVSAFLWDMQQETTPVAAAPAAATRQGEVGGVDADFTKLDLSFNPFLSRNLELLSEEVDRMAGQLEKIKRFATGQGGRGGYHQREHRSWGKRREEEEE---RNAEPNRVETVMTATQIDAYCSQISSFSKSGVSKLYLVGSLHKE 363 ++ V+++G A L+I+KHC+++LP TG+LLGL + E+G +++T+AF P +A DE GH Q MKML+EVNVD+N +GWY++M LG S +L D A +++ +V+LYDP+QTA G L +K YR L + + G +F +++ +E+PV + N G+V + L DM GE GG D F +LDLS NP+L ++LE L VD +A + K + + + ++ + + +E ++ P R+E+++ + QI YC Q+ F+ G KL++ +HKE Sbjct: 11 VTSVKLEGLAALKIIKHCQESLPTMVTGSLLGLMI--EDG--CLEITHAFPFPEPLNDKGDIVKTADEANVDDEAAALDGHEFQ------------------LEMMKMLREVNVDNNCIGWYQSMYLGTHS-------------TPSLLDNQLAYQADLSPNAVVVLYDPMQTAHGSLVLKCYR-LTDEAVKLKTSGKNTFINPREIFQEVPVTLNNPGLVRSLLRDM---------GDGLHGPYGEEGGPDTTFDRLDLSTNPYLEKHLEFLCTWVDDLASEQYKFQHYTRSLRSNVDTRNKGRKAKDELAQAIQEGWTKSDAPRRMESLLMSNQIRTYCDQVEKFTGGGFGKLFMTSGIHKE 329
BLAST of NO08G04030 vs. NCBI_GenBank
Match: GAX26021.1 (translation initiation factor 3 subunit H [Fistulifera solaris]) HSP 1 Score: 152.5 bits (384), Expect = 2.500e-33 Identity = 108/361 (29.92%), Postives = 176/361 (48.75%), Query Frame = 0 Query: 19 ISEVQIDGAALLRIVKHCEDNLPGASTGALLGLDVPKENGKMVMQVTYAFALPRGRDAG---------YQDERPGHNRQXXXXXXXXXXXXXXXXXXXXXMKMLKEVNVDSNMVGWYRTMQLGHFSEGGSKVDASGLRAQRTLFDVPPALVDEMAETNIVLLYDPVQTAMGDLTVKAYRHLRTPTTREEVE--GVVSFKDLLEEIPVVIRNAGIVSAFLWDM------QQETTPVAAAPAAATRQGEVGGVDADFTKLDLSFNPFLSRNLELLSEEVDRMAGQLEKIKRFATGQGGRGGYHQREHRSWGKRREEEEERNAEPNRVETVMTATQIDAYCSQISSFSKSGVSKLYLVGSLHKE 363 IS+V I+G AL++IVKHC ++LP +G+LLGL+V +++VT+AF P R A + ++ GH Q M+ML+EVNVD+N VGWY++M LG +S +L + + +++ +V+LYDP+QT G L +K YR +E E + + + EE+PV + N G+V A L D+ + R G V F +LDLS NP+L ++LE L VD +A + +K++ +A H+ +HR + + P R+E+++ QI +YC Q++ F+ G+ K+YL+ + K+ Sbjct: 11 ISQVHIEGLALMKIVKHCHESLPHMVSGSLLGLEV----SGGILEVTHAFPFPDSRAAAGSAAAVSDTMEGDQDGHEYQ------------------IEMMRMLREVNVDNNCVGWYQSMYLGIYSTS-------------SLLENQLSYQTDLSPNAVVILYDPMQTTHGKLALKCYRLTEECIRLKENEENAFIDPRKIFEEVPVKLTNPGLVKALLMDVADGVHDDSSNLQLFEKEHNTNRLGS-STVKTTFDRLDLSTNPYLEKHLEFLCGWVDDLAVEQQKMQFYAR------QLHRDKHRRKDSSAGDAWASSDAPRRMESLLITNQIRSYCEQMNQFTSEGIEKVYLMSGMQKK 329
BLAST of NO08G04030 vs. NCBI_GenBank
Match: OEU18653.1 (hypothetical protein FRACYDRAFT_268393 [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 150.2 bits (378), Expect = 1.300e-32 Identity = 114/351 (32.48%), Postives = 167/351 (47.58%), Query Frame = 0 Query: 15 TRGLISEVQIDGAALLRIVKHCEDNLPGASTGALLGLDVPKENGKMVMQVTYAFALPRGRDAGYQDERPGHNRQXXXXXXXXXXXXXXXXXXXXXMKMLKEVNVDSNMVGWYRTMQLGHFSEGGSKVDASGLRAQRTLFDVPPALVDEMAETNIVLLYDPVQTAMGDLTVKAYRHLRTPTTREEVEGVVSF---KDLLEEIPVVIRNAGIVSAFLWDMQQETTPVAAAPAAATRQGEVGGVDADFTKLDLSFNPFLSRNLELLSEEVDRMAGQLEKIKRFATGQGGRGGYHQREHRSWGKRREEEEERNAEPNRVETVMTATQIDAYCSQISSFSKSGVSKLYLVGSLHKE 363 T+G I EV I+G A+++IVKHC+D+LP GALLGL V + V+++T+AF P G G N M+ML+EVNVD+N VGWY++ LG +S S V + L Q DV P +++LYDP+QT+ G +KA+R L + G F K++ EE+PV N + +A L D + T D +LD+S P+L ++LE + VD +A + +K ++ T RG RE W + P R+E+++ A QID YC Q+ + G+ KL+L G LHKE Sbjct: 8 TKGRIKEVHIEGLAMMKIVKHCQDSLPSMVQGALLGLAVAGD----VLEITHAFPNPSG------GNNSGSNN--------AVDDDVDAEYQFEMMRMLREVNVDNNCVGWYQSTYLGIYST--SSVLENQLSYQT---DVSP--------NAVMILYDPLQTSNGTFCLKAFR-LSDECLEMKQSGRNDFIKPKNIFEELPVKCTNPSLANAMLQDWKPPT-------------------DISLDRLDMSAQPYLEKHLESMCGWVDELANEQQKF-QYYTRHLARGNNKSRE--GWSTNPD-------APPRMESLLVANQIDNYCEQMDKYVSGGLGKLFLAGGLHKE 297
BLAST of NO08G04030 vs. NCBI_GenBank
Match: GAX24359.1 (translation initiation factor 3 subunit H [Fistulifera solaris]) HSP 1 Score: 139.0 bits (349), Expect = 2.900e-29 Identity = 100/350 (28.57%), Postives = 167/350 (47.71%), Query Frame = 0 Query: 30 LRIVKHCEDNLPGASTGALLGLDVPKENGKMVMQVTYAFALPRGRDAG---------YQDERPGHNRQXXXXXXXXXXXXXXXXXXXXXMKMLKEVNVDSNMVGWYRTMQLGHFSEGGSKVDASGLRAQRTLFDVPPALVDEMAETNIVLLYDPVQTAMGDLTVKAYRHLRTPTTREEVE--GVVSFKDLLEEIPVVIRNAGIVSAFLWDM------QQETTPVAAAPAAATRQGEVGGVDADFTKLDLSFNPFLSRNLELLSEEVDRMAGQLEKIKRFATGQGGRGGYHQREHRSWGKRREEEEERNAEPNRVETVMTATQIDAYCSQISSFSKSGVSKLYLVGSLHKE 363 ++IVKHC ++LP +G+LLGL+V +++VT+AF P R A + ++ GH Q M+ML+EVNVD+N VGWY++M LG +S S L + + + +++ +V+LYDP+QT G L +K YR +E E + + + EE+PV + N G+V A L D+ + R G + F +LDL NP+L ++LE L VD +A + +K++ +A H+ +HR + + P R+E+++ QI +YC Q++ F+ G+ K+YL+ + K+ Sbjct: 1 MKIVKHCHESLPHMVSGSLLGLEV----SGGILEVTHAFPFPDSRAAAGSAAAVSDTMEGDQDGHEYQ------------------IEMMRMLREVNVDNNCVGWYQSMYLGIYS-------TSSLLENQLSYQM------DLSPNAVVILYDPMQTTHGKLALKCYRLTEECIRLKENEENAFIDPRKIFEEVPVKLTNPGLVKALLMDVADGVHDDSSNLQLFEKEHNTNRLGS-STIKTTFDRLDLGTNPYLEKHLEFLCGWVDDLAVEQQKMQFYAR------QLHRDKHRQKDSTAGDAWASSDAPRRMESLLITNQIRSYCEQMNQFTSEGIEKVYLMSGMQKK 308
BLAST of NO08G04030 vs. NCBI_GenBank
Match: OAE27626.1 (hypothetical protein AXG93_2520s1220 [Marchantia polymorpha subsp. ruderalis]) HSP 1 Score: 134.4 bits (337), Expect = 7.200e-28 Identity = 107/367 (29.16%), Postives = 179/367 (48.77%), Query Frame = 0 Query: 22 VQIDGAALLRIVKHCEDNLPGASTGALLGLDVPKENGKMVMQVTYAFALP-RGRDAGYQDERPGHNRQXXXXXXXXXXXXXXXXXXXXXMKMLKEVNVDSNMVGWYRTMQLGHFSEGGSKVDASGLRAQRTLFDVPPALVDEMAETNIVLLYDPVQTAMGDLTVKAYR-------HLRTPTTREEV--EGVVSFKDLLEEIPVVIRNAGIVSAFLWDMQQETTPVAAAPAAATRQGEVGGVDADFTKLDLSFNPFLSRNLELLSEEVDRMAGQLEKI----KRFATGQGGRGGYHQRE------HRSWGKRREEEEERN-------AEPNRVETVMTATQIDAYCSQISSFSKSGVSKLYLVGSLHK 362 VQIDG +L+IVKHC++ +P TG LLGLD+ +++VT F P RG + + E G N Q M+ L+EVNVD+N VGWY++ +G + + T + E + + ++YDP++++ G + +KA R RT + E E +++ D+ EEIPV I N+ +VSA + +++ + APA DF +L LS NPF+ +NLE L E +D + + +K + + QG + + Q+ R+ G+ EE+ N EP+R+++ + Q++ YC+QI+ F+ +SK+YL+ +LH+ Sbjct: 69 VQIDGLVVLKIVKHCKECMPALVTGQLLGLDIGS-----ILEVTNCFPFPSRGGEEEDEVEADGANYQ------------------LEMMRCLREVNVDNNTVGWYQSTYMGSYQT---------VELIETFLN-----YQENIKRCVCIIYDPLRSSQGIVALKALRLTDAFMELYRTENFKGEKLREKNMTWTDIFEEIPVKISNSSLVSAVMTELETD------APA----------TQCDFDRLVLSTNPFMEKNLEFLIECMDDLGMEQQKFQYYYRNLSRQQGQQQAWLQKRRAENMARRASGEEPLPEEDSNNPLFKPIPEPSRLDSYLITNQVNNYCNQINGFAAQSLSKIYLMDALHE 382
BLAST of NO08G04030 vs. NCBI_GenBank
Match: PTQ29017.1 (hypothetical protein MARPO_0149s0014 [Marchantia polymorpha]) HSP 1 Score: 134.4 bits (337), Expect = 7.200e-28 Identity = 107/367 (29.16%), Postives = 179/367 (48.77%), Query Frame = 0 Query: 22 VQIDGAALLRIVKHCEDNLPGASTGALLGLDVPKENGKMVMQVTYAFALP-RGRDAGYQDERPGHNRQXXXXXXXXXXXXXXXXXXXXXMKMLKEVNVDSNMVGWYRTMQLGHFSEGGSKVDASGLRAQRTLFDVPPALVDEMAETNIVLLYDPVQTAMGDLTVKAYR-------HLRTPTTREEV--EGVVSFKDLLEEIPVVIRNAGIVSAFLWDMQQETTPVAAAPAAATRQGEVGGVDADFTKLDLSFNPFLSRNLELLSEEVDRMAGQLEKI----KRFATGQGGRGGYHQRE------HRSWGKRREEEEERN-------AEPNRVETVMTATQIDAYCSQISSFSKSGVSKLYLVGSLHK 362 VQIDG +L+IVKHC++ +P TG LLGLD+ +++VT F P RG + + E G N Q M+ L+EVNVD+N VGWY++ +G + + T + E + + ++YDP++++ G + +KA R RT + E E +++ D+ EEIPV I N+ +VSA + +++ + APA DF +L LS NPF+ +NLE L E +D + + +K + + QG + + Q+ R+ G+ EE+ N EP+R+++ + Q++ YC+QI+ F+ +SK+YL+ +LH+ Sbjct: 28 VQIDGLVVLKIVKHCKECMPALVTGQLLGLDIGS-----ILEVTNCFPFPSRGGEEEDEVEADGANYQ------------------LEMMRCLREVNVDNNTVGWYQSTYMGSYQT---------VELIETFLN-----YQENIKRCVCIIYDPLRSSQGIVALKALRLTDAFMELYRTENFKGEKLREKNMTWTDIFEEIPVKISNSSLVSAVMTELETD------APA----------TQCDFDRLVLSTNPFMEKNLEFLIECMDDLGMEQQKFQYYYRNLSRQQGQQQAWLQKRRAENMARRASGEEPLPEEDSNNPLFKPIPEPSRLDSYLITNQVNNYCNQINGFAAQSLSKIYLMDALHE 341
BLAST of NO08G04030 vs. NCBI_GenBank
Match: XP_002988412.1 (eukaryotic translation initiation factor 3 subunit H [Selaginella moellendorffii] >EFJ10502.1 hypothetical protein SELMODRAFT_271999 [Selaginella moellendorffii]) HSP 1 Score: 131.0 bits (328), Expect = 7.900e-27 Identity = 106/368 (28.80%), Postives = 178/368 (48.37%), Query Frame = 0 Query: 22 VQIDGAALLRIVKHCEDNLPGASTGALLGLDVPKENGKMVMQVTYAFALP-RGRDAGYQDERPGHNRQXXXXXXXXXXXXXXXXXXXXXMKMLKEVNVDSNMVGWYRTMQLGHFSEGGSKVDASGLRAQRTLFDVPPALVDEMAETNIVLLYDPVQTAMGDLTVKAYR--------HLRTPTTREEV-EGVVSFKDLLEEIPVVIRNAGIVSAFLWDMQQETTPVAAAPAAATRQGEVGGVDADFTKLDLSFNPFLSRNLELLSEEVDRMAGQLEKI----KRFATGQGGRGGYHQREHRSWGKRRE-------EEEERNA------EPNRVETVMTATQIDAYCSQISSFSKSGVSKLYLVGSLHKE 363 VQIDG +L+I+KHC++ +P TG LLGLD+ +++T F P RG + + E G N Q M+ L+EVNVD+N VGWY++ +G F + T + E + + ++YDP++++ G L +KA R + E++ E V+++D+ EEIPV I N+ +VSA + +++ + +PA DF +L LS NPF+ +NLE L E +D ++ + +K + A Q + + Q+ RR+ E++ NA EP+R+++ + QI YCSQI+ F+ SK+YL+ ++H++ Sbjct: 28 VQIDGLVVLKIIKHCKECMPALVTGQLLGLDI-----GTTLEITNCFPFPSRGGEEDEELESDGANYQ------------------LEMMRCLREVNVDNNTVGWYQSTYMGSFQT---------VELIETFLN-----YQENIKRCVCIIYDPLRSSQGVLALKALRLTDSFMELYRSNNFNGEKLREKNVTWQDIFEEIPVRISNSALVSALMTELETD------SPA----------TQCDFDRLVLSTNPFMEKNLEFLIECMDDLSMEQQKFQFYYRNLARQQTQQQAWLQKRRAENMARRQAGEDPLPEDDPNNAVFKSIPEPSRLDSYLITNQIANYCSQINGFAGQSFSKIYLMDAVHED 342 The following BLAST results are available for this feature:
BLAST of NO08G04030 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO08G04030 ID=NO08G04030|Name=NO08G04030|organism=Nannochloropsis oceanica|type=gene|length=1119bpback to top protein sequence of NO08G04030.1 >NO08G04030.1-protein ID=NO08G04030.1-protein|Name=NO08G04030.1|organism=Nannochloropsis oceanica|type=polypeptide|length=373bpback to top Synonyms
Publications
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