NO08G03960, NO08G03960 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO08G03960 vs. NCBI_GenBank
Match: EWM26862.1 (Uncharacterized protein family UPF0047 [Nannochloropsis gaditana]) HSP 1 Score: 357.5 bits (916), Expect = 4.000e-95 Identity = 176/246 (71.54%), Postives = 202/246 (82.11%), Query Frame = 0 Query: 38 PSTVTTFTAVHAHSQQQAALQLMQGASSSPSASVSDPYTPPAVAQSVHRASLPDPDAADLTGTGDSVRVVTQQMKKNDGPAITNYVEISLSTKEGISLHDITPQLHQAIREAKIQEGWVNVVSRHTTTAVTINECESRLMDDIRQYCLKLAPPSHPYLHNDIHLRPATEEDRRRVMGGGEWRDVEEWRAQEPKNCHAHLLSMLVGNSVSVPVSRGRLRIGRWQSVMMVELDGERERTVGIQVVGYE 284 P+T+TT H H QAALQL+ SS S+ SD Y PP+ A VHRASLPDPD D TGTG+ V Q KK+ GP++T+Y+EISL TK GISLHDITPQL QA+RE+ + EGWV++VSRHTTTAVTINECESRLMDDIRQ+ LKLAPP +PYLHNDIHLRPA+EED+RRV GGEW VEEWRAQEP+NCHAHLLSML+GN++ VPVS G+L+IGRWQSVMMVELDGERERTVGIQVVGYE Sbjct: 44 PTTITTTLLAHGH--LQAALQLIHDTHSSISSVPSDQYHPPSPALEVHRASLPDPDVVDTTGTGEKVSFGAQHTKKHTGPSVTSYLEISLPTKSGISLHDITPQLRQAVRESGVVEGWVHIVSRHTTTAVTINECESRLMDDIRQFLLKLAPPQYPYLHNDIHLRPASEEDKRRVAAGGEWESVEEWRAQEPQNCHAHLLSMLLGNTLVVPVSGGKLKIGRWQSVMMVELDGERERTVGIQVVGYE 287
BLAST of NO08G03960 vs. NCBI_GenBank
Match: XP_002500372.1 (predicted protein [Micromonas commoda] >ACO61630.1 predicted protein [Micromonas commoda]) HSP 1 Score: 205.3 bits (521), Expect = 2.500e-49 Identity = 101/164 (61.59%), Postives = 123/164 (75.00%), Query Frame = 0 Query: 118 AITNYVEISLSTKEGISLHDITPQLHQAIREAKIQEGWVNVVSRHTTTAVTINECESRLMDDIRQYCLKLAPPSHPYLHNDIHLRPATEEDRRRVMGGGEWRDVEEWRAQEPKNCHAHLLSMLVGNSVSVPVSRGRLRIGRWQSVMMVELDGERERTVGIQVVG 282 ++ Y ++SL T GISLHDITPQ+ +AIRE+ + G VNV+SRHTTTAVTINE E RLMDDIRQY LKLAPP PYLHNDIHLR + GG + WRAQEP+N H+HLLS+L+GN+++VPV G L IG WQS+M+VELDG R+RTVG+QV G Sbjct: 17 SVFEYTQLSLDTSLGISLHDITPQVRRAIRESGVTNGTVNVLSRHTTTAVTINEAEGRLMDDIRQYMLKLAPPGDPYLHNDIHLRDGPPD-----WPGGN----DAWRAQEPRNAHSHLLSILIGNTLAVPVVDGELAIGTWQSLMLVELDGPRKRTVGVQVCG 171
BLAST of NO08G03960 vs. NCBI_GenBank
Match: PRW58497.1 (secondary thiamine-phosphate synthase enzyme isoform B [Chlorella sorokiniana] >PRW58498.1 secondary thiamine-phosphate synthase enzyme isoform A [Chlorella sorokiniana]) HSP 1 Score: 191.0 bits (484), Expect = 4.900e-45 Identity = 92/161 (57.14%), Postives = 118/161 (73.29%), Query Frame = 0 Query: 119 ITNYVEISLSTKEGISLHDITPQLHQAIREAKIQEGWVNVVSRHTTTAVTINECESRLMDDIRQYCLKLAPPSHPYLHNDIHLRPATEEDRRRVMGGGEWRDVEEWRAQEPKNCHAHLLSMLVGNSVSVPVSRGRLRIGRWQSVMMVELDGERERTVGIQV 280 + +Y E+ L TK GI + DITPQ+ + +QEG+VNV+SRHTTTAVTINECE RL+DDIRQ+ +LAPP+ PYLHND+ R A G W E W AQEP+N H+HLLSM++GNS +VPV+ G+L +G+WQSVM+VELDG R+RTVG+QV Sbjct: 1176 VFHYTELQLDTKPGIHIVDITPQIRAEVERLGVQEGFVNVLSRHTTTAVTINECEPRLLDDIRQFLRRLAPPNEPYLHNDLQYREAPPN------WPGGW---EAWAAQEPENAHSHLLSMVLGNSETVPVTGGKLALGQWQSVMLVELDGARKRTVGVQV 1327
BLAST of NO08G03960 vs. NCBI_GenBank
Match: XP_005822519.1 (hypothetical protein GUITHDRAFT_79753, partial [Guillardia theta CCMP2712] >EKX35539.1 hypothetical protein GUITHDRAFT_79753, partial [Guillardia theta CCMP2712]) HSP 1 Score: 188.3 bits (477), Expect = 3.200e-44 Identity = 91/153 (59.48%), Postives = 120/153 (78.43%), Query Frame = 0 Query: 133 ISLHDITPQLHQAIREAKIQEGWVNVVSRHTTTAVTINECESRLMDDIRQYCLKLAPPSHPYLHNDIHLRPATEEDRRRV-MGGGEWRD---VEEWRAQEPKNCHAHLLSMLVGNSVSVPVSRGRLRIGRWQSVMMVELDGERERTVGIQVVG 282 IS+ DITP++ + I+ + ++ G+VNV+SRHTTTAV INE ESRL+ D++ Y LK+APP YLHN+IHLRP T+ED+RRV + + D +E WR+QEP N H+HLLSM++GNS S+PVS G L IG+WQSVM+V+LDG R+RTVGIQV G Sbjct: 1 ISVWDITPEIKELIKTSGMKNGFVNVISRHTTTAVMINEYESRLIKDLKDYFLKIAPPDAKYLHNEIHLRPETQEDKRRVLLNNWDINDPAVLEAWRSQEPFNAHSHLLSMMLGNSESIPVSNGELAIGQWQSVMLVDLDGPRKRTVGIQVFG 153
BLAST of NO08G03960 vs. NCBI_GenBank
Match: PNW78452.1 (hypothetical protein CHLRE_09g396850v5 [Chlamydomonas reinhardtii]) HSP 1 Score: 183.7 bits (465), Expect = 7.800e-43 Identity = 105/229 (45.85%), Postives = 142/229 (62.01%), Query Frame = 0 Query: 57 LQLMQGASSSPSASVSD--PYTPPAVAQSVHRASLPDPDAADLTGTGDSVRVVTQQMKKNDGPAITNYVEISL-STKEGISLHDITPQLHQAIREAKIQEGWVNVVSRHTTTAVTINECESRLMDDIRQYCLKLAPPSHPYLHNDIHLRPATEEDRRRVMGGGEWRDVEEWRAQEPKNCHAHLLSMLVGNSVSVPVSRGRLRIGRWQSVMMVELDGERERTVGIQVVGY 283 L G +P +D P+ PP + V R S P A V T ++ I NY ++ + +T GI+L D+TPQ+ + + ++ + EG VNV+SRHTTTAVTINE E+RLMDD+RQ+ KLAP S PYLHND+HLRPA E+ G W W QEP+N H+HLLSM++GN++++PVS RL +G WQSV++VELDG R RTVG+Q+ GY Sbjct: 25 LHAFGGERLAPRLVAADALPHEPPGTSTEV-RISASQPPA---------VSAATHRL-------IFNYHQLEVAATPPGIALVDVTPQIRELVSQSGLVEGTVNVLSRHTTTAVTINENETRLMDDVRQFLSKLAPASAPYLHNDLHLRPAPED------WPGGW---AAWAGQEPQNAHSHLLSMVLGNTLAIPVSGSRLALGTWQSVLLVELDGPRPRTVGVQLTGY 227
BLAST of NO08G03960 vs. NCBI_GenBank
Match: XP_002955236.1 (hypothetical protein VOLCADRAFT_106701 [Volvox carteri f. nagariensis] >EFJ43755.1 hypothetical protein VOLCADRAFT_106701 [Volvox carteri f. nagariensis]) HSP 1 Score: 182.2 bits (461), Expect = 2.300e-42 Identity = 88/164 (53.66%), Postives = 121/164 (73.78%), Query Frame = 0 Query: 117 PAITNYVEISL-STKEGISLHDITPQLHQAIREAKIQEGWVNVVSRHTTTAVTINECESRLMDDIRQYCLKLAPPSHPYLHNDIHLRPATEEDRRRVMGGGEWRDVEEWRAQEPKNCHAHLLSMLVGNSVSVPVSRGRLRIGRWQSVMMVELDGERERTVGIQV 280 P NY ++ + T GI+L DITPQ+ + + +A + EG V+V+SRHTTTA+TINE E+RL+DD+RQ+ +LAPP+ PYLHND+HLRPA + G W W AQEP+N H+HLLSML+GN+++VPV+ G+L +G WQSVM+VELDG R R+VG+Q+ Sbjct: 20 PVTYNYHQLEVPQTPPGIALIDITPQIRELVAQAGLMEGCVHVLSRHTTTALTINENEARLLDDVRQFLARLAPPTDPYLHNDLHLRPAPDS------WPGGW---AAWAAQEPRNAHSHLLSMLLGNTLTVPVTGGKLALGTWQSVMLVELDGPRPRSVGVQL 174
BLAST of NO08G03960 vs. NCBI_GenBank
Match: XP_005851746.1 (hypothetical protein CHLNCDRAFT_18455 [Chlorella variabilis] >EFN59644.1 hypothetical protein CHLNCDRAFT_18455 [Chlorella variabilis]) HSP 1 Score: 177.2 bits (448), Expect = 7.300e-41 Identity = 90/161 (55.90%), Postives = 115/161 (71.43%), Query Frame = 0 Query: 123 VEISLSTKEGISLHDITPQLH--QAIREAKIQEGWVNVVSRHTTTAVTINECESRLMDDIRQYCLKLAPPSHPYLHNDIHLRPATEEDRRRVMGGGEWRDVEEWRAQEPKNCHAHLLSMLVGNSVSVPVSRGRLRIGRWQSVMMVELDGERERTVGIQVVG 282 +++ L TK GI + DITPQ QA R + EG+VN++SRHTTTA+ INECE+RL+DDIRQ+ KLAPP+ PYLHND+ R A +W E AQEP+N H+HLLSM++GNS +VP++ GRL +G WQSVM+VELDG R RTVG+QVVG Sbjct: 1 MQLELETKPGIHIVDITPQARGLQAAR-LGVAEGFVNILSRHTTTAIAINECEARLLDDIRQFLRKLAPPNEPYLHNDLQYREAPP----------DWPGGWEAAAQEPENAHSHLLSMVLGNSETVPITGGRLALGTWQSVMLVELDGARTRTVGVQVVG 150
BLAST of NO08G03960 vs. NCBI_GenBank
Match: GAX85464.1 (hypothetical protein CEUSTIGMA_g12880.t1 [Chlamydomonas eustigma]) HSP 1 Score: 174.9 bits (442), Expect = 3.600e-40 Identity = 87/159 (54.72%), Postives = 115/159 (72.33%), Query Frame = 0 Query: 122 YVEISLSTKEGISLHDITPQLHQAIREAKIQEGWVNVVSRHTTTAVTINECESRLMDDIRQYCLKLAPPSHPYLHNDIHLRPATEEDRRRVMGGGEWRDVEEWRAQEPKNCHAHLLSMLVGNSVSVPVSRGRLRIGRWQSVMMVELDGERERTVGIQVV 281 + +I T GIS+ DITP++ I I+EG V+V+S+HTTTAVTINE E RLM+DI+Q+ LKLAPP PYLHND+HLR A + GG W AQEP N H+HLLS+L+GN++SVPVS G+L +G WQS+++V+LDG R+RTVG+Q+V Sbjct: 49 FFQIGKETGPGISITDITPEIKHEIEVLNIREGTVHVLSQHTTTAVTINESEPRLMNDIKQWLLKLAPPGEPYLHNDLHLREAP-----KGWPGGH----AAWVAQEPINAHSHLLSILIGNTLSVPVSDGKLCLGTWQSILLVDLDGPRKRTVGVQLV 198
BLAST of NO08G03960 vs. NCBI_GenBank
Match: XP_007513371.1 (protein of unknown function UPF0047 [Bathycoccus prasinos] >CCO16929.1 protein of unknown function UPF0047 [Bathycoccus prasinos]) HSP 1 Score: 174.5 bits (441), Expect = 4.700e-40 Identity = 88/164 (53.66%), Postives = 117/164 (71.34%), Query Frame = 0 Query: 120 TNYVEISL-STKEGISLHDITPQLHQAIREAKIQEGWVNVVSRHTTTAVTINECESRLMDDIRQYCLKLAPPSHPYLHNDIHLRPATEEDRRRVMGGGEWR-DVEEWRAQEPKNCHAHLLSMLVGNSVSVPVSRGRLRIGRWQSVMMVELDGERERTVGIQVVG 282 T+Y ++L T+ GI+ D+ ++ I + I+ G V V SRHTTTAVTINE E RL+DD RQ+ LKL PP +PYLHND+H+R ++DR W+ VEEWRAQEP N H+HL++ML+G SV+VP+ G++ +G WQS++ VELDGERERTVGIQV G Sbjct: 69 TSYETVNLGKTQHGIAFTDLNNICNEMIAKNGIKNGQVVVHSRHTTTAVTINEYEERLVDDARQFLLKLVPPLYPYLHNDLHVRFPPDDDR--------WKGTVEEWRAQEPLNAHSHLIAMLLGQSVTVPICDGKMTLGTWQSILFVELDGERERTVGIQVSG 224
BLAST of NO08G03960 vs. NCBI_GenBank
Match: XP_022839135.1 (Uncharacterised protein family UPF0047 [Ostreococcus tauri] >CEF98202.1 Uncharacterised protein family UPF0047 [Ostreococcus tauri]) HSP 1 Score: 172.9 bits (437), Expect = 1.400e-39 Identity = 93/165 (56.36%), Postives = 113/165 (68.48%), Query Frame = 0 Query: 119 ITNYVEISL-STKEGISLHDITPQLHQAIREAKIQEGWVNVVSRHTTTAVTINECESRLMDDIRQYCLKLAPPSHPYLHNDIHLRPATEEDRRRVMGGGEWRDVEE-WRAQEPKNCHAHLLSMLVGNSVSVPVSRGRLRIGRWQSVMMVELDGERERTVGIQVVG 282 + Y I L +T GI D++ + +AI A ++EG V+V+SRHTTTAVTINE E RL+DD R Y +LAP YLHND+ DRRR G +W +E WRAQEP+NCH+HLLSML+GNS VPVS G+ +G WQSVM VELDG RERTVGIQVVG Sbjct: 48 VYRYETIDLGTTLGGIDFKDLSEHIDRAIERAGVREGAVHVISRHTTTAVTINENEERLIDDARMYLSRLAPADDFYLHNDL--------DRRR--GPADWPGGDEAWRAQEPRNCHSHLLSMLIGNSAVVPVSEGKTTLGTWQSVMFVELDGPRERTVGIQVVG 202 The following BLAST results are available for this feature:
BLAST of NO08G03960 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO08G03960 ID=NO08G03960|Name=NO08G03960|organism=Nannochloropsis oceanica|type=gene|length=1331bpback to top protein sequence of NO08G03960.1 >NO08G03960.1-protein ID=NO08G03960.1-protein|Name=NO08G03960.1|organism=Nannochloropsis oceanica|type=polypeptide|length=284bpback to top Synonyms
Publications
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