NO08G03930, NO08G03930 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO08G03930 vs. NCBI_GenBank
Match: EWM26864.1 (plastid lipid associated protein [Nannochloropsis gaditana]) HSP 1 Score: 282.0 bits (720), Expect = 1.700e-72 Identity = 140/181 (77.35%), Postives = 162/181 (89.50%), Query Frame = 0 Query: 28 TLAFNFFPTRSS-GAALKAGGPLAKLKTDLLSKAEEVNRGLESTPEKEEAILSLIKTIEKKNPTXXXXXXPLITARWRLVYTTSESILGKTRPALFRPVGPIYQYIDLAKGTARNEEQIRPIPFLPAIDEAIDATIEPASPQRVNVFFQRLMIGPLNVKFQSSNYLDTTYLDQEMRISRGG 208 T FNFFPTRSS G A+KAGGP++K+KT+LL KAEEV+RGLE++ E++E+IL+LIK++EKKNPT LITARWRLV+TTSESILGKTRPA+FRPVGPIYQYI+LA+GTARNEEQIRPIPFLPAI+EAIDATIEP S QRVNVFFQRL +GPLN KFQS NYLDTTYLD++MRISR G Sbjct: 27 THGFNFFPTRSSAGTAVKAGGPVSKIKTELLRKAEEVSRGLEASQEQQESILALIKSLEKKNPTKSPTSSALITARWRLVFTTSESILGKTRPAVFRPVGPIYQYINLARGTARNEEQIRPIPFLPAIEEAIDATIEPVSSQRVNVFFQRLFLGPLNFKFQSENYLDTTYLDKDMRISRSG 207
BLAST of NO08G03930 vs. NCBI_GenBank
Match: XP_011397021.1 (putative plastid-lipid-associated protein 4, chloroplastic, partial [Auxenochlorella protothecoides] >KFM24135.1 putative plastid-lipid-associated protein 4, chloroplastic, partial [Auxenochlorella protothecoides]) HSP 1 Score: 129.4 bits (324), Expect = 1.400e-26 Identity = 70/172 (40.70%), Postives = 99/172 (57.56%), Query Frame = 0 Query: 50 AKLKTDLLSKAEEVNRGLESTPEKEEAILSLIKTIEKKNPTXXXXXXPLITARWRLVYTTSESILGKTRPALFRPVGPIYQYIDLAKGTARNEEQIRPIPFLPAIDEAIDATIEPASPQRVNVFFQRLMIG---PLNVKFQSSNYLDTTYLDQEMRISRGGRGNVFVLVRDD 219 A L+T LL E + RGL +TP E I L+ +E +NPT PL+ +W L+YTTS+SILG++RP+ RP GPIYQ +D +N E + A++A +EP S V V F+R + P+ + LDTTYLD+++RISRG +GN+FVL +D Sbjct: 11 AHLQTQLLEAIEPLQRGLTATPSDVERIEGLVVELEGRNPTAAPVNSPLLNGQWELLYTTSDSILGRSRPSFLRPKGPIYQTLDNESLRGKNRE-------TTPLFNAVEAELEPISDSEVAVQFKRFWLAGFIPVPAPASARGRLDTTYLDEDLRISRGDKGNLFVLRMND 175
BLAST of NO08G03930 vs. NCBI_GenBank
Match: CBJ31999.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 125.6 bits (314), Expect = 2.000e-25 Identity = 68/169 (40.24%), Postives = 98/169 (57.99%), Query Frame = 0 Query: 50 AKLKTDLLSKAEEVNRGLESTPEKEEAILSLIKTIEKKNPTXXXXXXPLITARWRLVYTTSESILGKTRPALFRPVGPIYQYIDLAKGTARNEEQIRPIPFLPAIDEAIDATIEPASPQRVNVFFQRLMIGPLNVKF--QSSNYLDTTYLDQEMRISRGGRGNVFVLVR 217 A K +LL + RGL ++ E + + L + +EK NP PL+ RW LVYTTS SIL K P + RP GPIYQ ID A N + I+PIPFL + + A + P + +V F+ +GPL +K ++ + +D TY+D E+R++RG +GN+FVLVR Sbjct: 62 ATAKQELLDAIVPLKRGLTASDEDKAVVEKLAQKVEKLNPNPKSLSSPLVNGRWELVYTTSMSILSKKNPVM-RPSGPIYQDIDAPGLRALNAQYIQPIPFL-KMPYQVSAELTPTTSSATDVQFKEFTVGPLKIKAPERAQSAIDITYVDDEVRVTRGSKGNLFVLVR 228
BLAST of NO08G03930 vs. NCBI_GenBank
Match: XP_005651947.1 (plastid fibrillin 3 [Coccomyxa subellipsoidea C-169] >EIE27403.1 plastid fibrillin 3 [Coccomyxa subellipsoidea C-169]) HSP 1 Score: 119.4 bits (298), Expect = 1.400e-23 Identity = 69/167 (41.32%), Postives = 98/167 (58.68%), Query Frame = 0 Query: 56 LLSKAEEVNRGLESTPEKEEAILSLIKTIEKKNPTXXXXXXPLITARWRLVYTTSESILGKTRPALFRPVGPIYQYIDLAKGTARNEEQIRPIPFLPAIDEAIDATIEPASPQRVNVFFQRL-MIGPLNVKFQSS--NYLDTTYLDQEMRISRGGRGNVFVLVRDDP 220 LL ++RG ++ ++ + L + +E+ NP PL++A+WRL+YTTS SILG T+P RP GPIYQ ID TA+N+E PF + AT+ P + RV V F+ ++G + VK S LDTTYLD+++RISRG +GN+FVL R P Sbjct: 7 LLELISRLDRGASASTSEKSEVDQLAQKLERVNPNKKALASPLLSAKWRLLYTTSASILGTTKPPFLRPQGPIYQTIDAQNLTAQNQE---TWPFF----NQVKATLTPETASRVAVQFREFKILGLIPVKAPPSARGKLDTTYLDEDLRISRGDKGNLFVLERAGP 166
BLAST of NO08G03930 vs. NCBI_GenBank
Match: CEL92460.1 (unnamed protein product [Vitrella brassicaformis CCMP3155]) HSP 1 Score: 117.5 bits (293), Expect = 5.500e-23 Identity = 73/172 (42.44%), Postives = 96/172 (55.81%), Query Frame = 0 Query: 50 AKLKTDLLSKAEEVNRGLESTPEKEEAILSLIKTIEKKNPTXXXXXXPLITARWRLVYTTSESILGKTRPALFRPV-GPIYQYIDLAKGTARNEEQIRPIPFLPAIDEAIDATIEPASPQRVNVFFQRLMIGPLNVKFQSS--NYLDTTYLDQEMRISRGGRGNVFVLVRDD 219 A K D L +A + RGL + +L+ ++ +EK NP PL++ +WRL++TTSESI G R FRPV I+Q ID TA N E I PIP + I ++A + P S V+V F +G L +K + LD TYLD EMRISRG +GN FVLVR D Sbjct: 61 ATKKKDALREA--IRRGL-----SDSEVLTAVEQVEKLNPNRRALKSPLLSGKWRLIWTTSESIKGTRRLPPFRPVKDEIFQTIDAKALTAENRETISPIPGV-RITNRVEAELTPTSDSAVDVKFTYFYLGSLRIKAPDTARGALDVTYLDDEMRISRGDKGNTFVLVRAD 224
BLAST of NO08G03930 vs. NCBI_GenBank
Match: XP_005847116.1 (hypothetical protein CHLNCDRAFT_134838 [Chlorella variabilis] >EFN55014.1 hypothetical protein CHLNCDRAFT_134838 [Chlorella variabilis]) HSP 1 Score: 116.3 bits (290), Expect = 1.200e-22 Identity = 67/169 (39.64%), Postives = 94/169 (55.62%), Query Frame = 0 Query: 49 LAKLKTDLLSKAEEVNRGLESTPEKEEAILSLIKTIEKKNPTXXXXXXPLITARWRLVYTTSESILGKTRPALFRPVGPIYQYIDLAKGTARNEEQIRPIPFLPAIDEAIDATIEPASPQRVNVFFQR---LMIGPLNVKFQSSNYLDTTYLDQEMRISRGGRGNVFVL 215 +A+ K +LL + RGL +T E + + L +E+ NPT LI +W L+YTTS+SILG ++PA RP GPIYQ ID TARN+E P ++ + A + P S +V V F+ L + P+ + L TYLD E+R+SRG RGN+FVL Sbjct: 15 VAEAKQELLEAIAPLKRGLTATDEDRQQVERLASKLERMNPTKRPLASDLINGQWELLYTTSDSILGMSKPAFLRPSGPIYQVIDAKALTARNKET------APLFNQ-VSAELIPESDSKVKVQFKEFKILGLVPIKAPPSAVGELAVTYLDDELRVSRGNRGNLFVL 176
BLAST of NO08G03930 vs. NCBI_GenBank
Match: XP_002505051.1 (predicted protein, partial [Micromonas commoda] >ACO66309.1 predicted protein, partial [Micromonas commoda]) HSP 1 Score: 115.9 bits (289), Expect = 1.600e-22 Identity = 70/184 (38.04%), Postives = 92/184 (50.00%), Query Frame = 0 Query: 40 GAALKAGGPLAK--LKTDLLSKAEEVNRGLESTPEKEEAILSLIKTIEKKNPTXXXXXXPLITARWRLVYTTSESILGKTRPALFRPVGPIYQYIDLAKGTARNEEQIRPIPFLPAIDEAIDATIEPASPQRVNVFFQRLMI---GPLNVKFQSSNYLDTTYLDQEMRISRGGRGNVFVLVRDD 219 G GG + K LL E RG+ ++ E A+ + +E+ NP PL+ W L+YTTS SILG +P RP GPIYQ ID+ + ARN E PF A+DA + P S VNV F + I P++ + LD TYLD + R+SRG RGN+FVL D Sbjct: 4 GGIFNGGGSKRREAAKAALLEAIEGTQRGVAASEEDVAAVEAAASALERLNPNRQPLASPLVNGEWELLYTTSASILGANKPWFLRPSGPIYQAIDVGRLRARNRE---TFPFF----NAVDADLTPTSRSAVNVQFVKFFIFGVAPVDAPPSARGALDVTYLDDDTRVSRGDRGNLFVLRMHD 180
BLAST of NO08G03930 vs. NCBI_GenBank
Match: PRW57178.1 (putative plastid-lipid-associated chloroplastic [Chlorella sorokiniana]) HSP 1 Score: 115.2 bits (287), Expect = 2.700e-22 Identity = 62/165 (37.58%), Postives = 94/165 (56.97%), Query Frame = 0 Query: 57 LSKAEEVNRGLESTPEKEEAILSLIKTIEKKNPTXXXXXXPLITARWRLVYTTSESILGKTRPALFRPVGPIYQYIDLAKGTARNEEQIRPIPFLPAIDEAIDATIEPASPQRVNVFFQR---LMIGPLNVKFQSSNYLDTTYLDQEMRISRGGRGNVFVLVRDD 219 L + + RGL ++ E ++ I L + +E++NPT L++ +W L+YTTS SILG RPAL RP GP YQ +D A TARN+E P + A + P + + V V F+ L + P+ ++ L+ TYLD+E+R+SRG +GN+F+L D Sbjct: 21 LEAIKPLKRGLAASEEDQQRIDRLARQLERRNPTKKPLASDLLSGQWELLYTTSGSILGANRPALLRPTGPTYQVLDTATLTARNKEG-------PPFFNQVSAELIPQNDRSVKVQFKEFKILGLIPIKAPANAAGALEVTYLDEELRVSRGDKGNLFILRMQD 178
BLAST of NO08G03930 vs. NCBI_GenBank
Match: XP_009035800.1 (hypothetical protein AURANDRAFT_63175 [Aureococcus anophagefferens] >EGB09762.1 hypothetical protein AURANDRAFT_63175 [Aureococcus anophagefferens]) HSP 1 Score: 114.4 bits (285), Expect = 4.700e-22 Identity = 69/165 (41.82%), Postives = 97/165 (58.79%), Query Frame = 0 Query: 56 LLSKAEEVNRGLESTPEKEEAILSLIKTIEKKNPTXXXXXXPLITARWRLVYTTSESILGKTRPALFRPVGPIYQYIDLAKGTARNEEQIRPIPFLPAIDEAIDATIEPASPQR-VNVFFQRLMIGPLNVKFQSS--NYLDTTYLDQEMRISRGGRGNVFVLVRD 218 L+ + EE + G + ++ +LS ++ +E NPT P + ARWRL+YTTS+SILG R LFRP I Q+++ A A NEE + + ++ AT+EP R V+V F+R IG L + S L+TTYLD E+RISRG +GN+FVLVRD Sbjct: 469 LVQECEEADMGRDL--KRRGVVLSHVEALEASNPTPEPLASPDLNARWRLIYTTSDSILGTNRMRLFRPRPRILQHVNAATLAAYNEEWV----LGGLLRNSVKATLEPRGDGRTVDVQFKRFGIGWLKIPAPKSARGVLETTYLDPELRISRGDKGNIFVLVRD 627
BLAST of NO08G03930 vs. NCBI_GenBank
Match: OSX69588.1 (hypothetical protein BU14_1367s0002 [Porphyra umbilicalis]) HSP 1 Score: 114.0 bits (284), Expect = 6.100e-22 Identity = 66/185 (35.68%), Postives = 98/185 (52.97%), Query Frame = 0 Query: 35 PTRSSGAALKAGGPLAKLKTDLLS--KAEEVNRGLESTPEKEEAILSLIKTIEKKNPTXXXXXXPLITARWRLVYTTSESILGKTRPALFRPVGPIYQYIDLAKGTARNEEQIRPIPFLPAIDEAIDATIEPASPQRVNVFFQRLMIGPLNVKFQSS--NYLDTTYLDQEMRISRGGRGNVFVLV 216 P + + P +K +L++ + + R + S +E I ++++ +E NPT + A W+LVYTTS SILG +RP RP I+Q +D+ GT N EQ+ + + AT P RV V FQR GPL+VK +S +LD TYLD E+R+SRG + N+FVL+ Sbjct: 50 PNGTPTMVFSSASPTTAVKAELMTAIASTRLGRSVASDRRAQEKIDAIVRRLEALNPTPVPVESAELGAVWKLVYTTSASILGTSRPPPLRPNDEIFQSVDVGAGTITNSEQLAG----GLLTNKVHATFGVKPPMRVQVQFQRFQFGPLSVKAPASAKGFLDVTYLDDEVRVSRGNKDNLFVLL 230 The following BLAST results are available for this feature:
BLAST of NO08G03930 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO08G03930 ID=NO08G03930|Name=NO08G03930|organism=Nannochloropsis oceanica|type=gene|length=1671bpback to top protein sequence of NO08G03930.1 >NO08G03930.1-protein ID=NO08G03930.1-protein|Name=NO08G03930.1|organism=Nannochloropsis oceanica|type=polypeptide|length=227bpback to top Synonyms
Publications
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