NO08G03920, NO08G03920 (gene) Nannochloropsis oceanica

Overview
NameNO08G03920
Unique NameNO08G03920
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1833
Alignment locationchr8:1101926..1103758 -

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr8genomechr8:1101926..1103758 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR036705Ribosyl_crysJ1_sf
IPR005502Ribosyl_crysJ1
Homology
BLAST of NO08G03920 vs. NCBI_GenBank
Match: KXZ44235.1 (hypothetical protein GPECTOR_70g465 [Gonium pectorale])

HSP 1 Score: 191.8 bits (486), Expect = 6.200e-45
Identity = 168/477 (35.22%), Postives = 210/477 (44.03%), Query Frame = 0
Query:   57 LEAEADRLHKLAQRLNKEGKYEDAKITYKEMYAVEDETLRQAAAVGIARATAGRRGERSGKDEGHESCNTLQP--LPPFRRRQTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLGAVXXXXVGDAAAMGIHWIYAPEELQRLWEARXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGLEFYQPPQSPFFSYPHGRSSPYGEQTILLLSSLHRNCGLDPFLYAQAYARQYGKGWEGYRDASTKGFLRRWYEEGGAREGWRDGDRWGVRDWQANCFTRLPPLVVGFG----------------------------GGEEEGGEGE---RSMLRAVEDATRVTQDDDRAVMWGKGAAGVLSRIIFEGKTIEMAIREVLEAFGDPKTPLGERGREIEEERVVEGLKKEVTRAFEQVLFLGVQEEGRTDVGGTVKLLGKNCHLPNSLQTALHAALFYAH 501
            LE EA  +H+LAQRLNKEG++++A+  Y  M+ +EDE    AA VG      G  G+ S  D+    CN L P  L P+R                                 +GAV    + DAAAMG+HW+Y  E L+RL   R                XXXXXXXXXX                           GLEF  PP+SPF++YP GR+SPYGEQT++LL SL    GL+   YA+ +A  +G G+EGYRD STKGFLR +   G A          G  D QANC  RL PLV  FG                             GE EG   E     +L  VE ATRVTQ+ D AV W    A VL  I+  G T E A+REV+     P+  L    R    + +   L+             G      + V   V  LG+NCH+PN+L T L   L   H
Sbjct:   16 LEQEALDMHELAQRLNKEGRFQEAQAAYSAMHRLEDEASALAAKVGCVACVLGEPGQSS--DDQPSLCN-LDPATLLPYR-------------SLHPARKWPPRDAPLLARRSVGAVEGSALADAAAMGVHWVYDLETLRRLEVERRAASATSPSTDCPASTXXXXXXXXXXSHPYDF---------------------GLEFMDPPRSPFYAYPSGRNSPYGEQTLVLLRSLAECRGLEAEHYAELFAGMFGPGFEGYRDVSTKGFLRNY---GRA----MPPPLSGANDAQANCIARLAPLVAAFGSPSTADPSRGATASGSFSGPALARSASSAGEREGAGTEAQTSDLLCCVELATRVTQNTDAAVAWACVGAAVLELIVL-GATAEAAVREVIRDLESPEGRLAPYCRGPNADELAAQLR-------------GCLALRSSPVAEAVAALGRNCHMPNALTTPLQVVLHVEH 434          
BLAST of NO08G03920 vs. NCBI_GenBank
Match: XP_001748921.1 (hypothetical protein [Monosiga brevicollis MX1] >EDQ86251.1 predicted protein [Monosiga brevicollis MX1])

HSP 1 Score: 191.4 bits (485), Expect = 8.100e-45
Identity = 181/574 (31.53%), Postives = 238/574 (41.46%), Query Frame = 0
Query:   57 LEAEADRLHKLAQRLNKEGKYEDAKITYKEMYAVEDETLRQAAAVGIARATAGRRGERSGKDE------GHESCNTLQP---LPPFRRRQTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLGAVXXXXVGDAAAMGIHWIYAPEELQRLWEARXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGLEFYQPPQSPFFSYPHGRSSPYGEQTILLLSSLHRNCGLDPFLYAQAYARQYGKGWE----GYRDASTKGFLRRWYEEGGAREGWRDGDRWGVRDWQANCFTRLPPLVVGFGGGEEEGGEGERSMLRAVEDATRVTQDDDRAVMWGKGAAGVLSRIIFEGKTIEMAIREVLEAFGDPKTPLGERGREIEEERVVEGLKKEVTRAFEQVLFLGVQEEGRTDVGGTVKLLGKNCHLPNSLQTALHAALFYAHGRS---WPSPLSLVPLSWTTAAVCEXXXXXXXXXXXXXXXXXXXALFKRTIRAAIREGGCCASRAGWVGACLGGWLGLEC------VPVEWRKEVNGFDQIRKEVEEI--IRHRRRR 607
            LEAEAD LH+ AQRLNK  ++  +K  YK+  A +D+ +  A A+ IA   A  RG  +GKD+          C   QP   LP     +                              LGAV    VGDAAA G+ W+Y P+EL   +EAR                                                     GLE+  PP +  F Y  GR+SPYGEQ +LLL +L  + GLD + YAQ +A  +G  W     GYRDAS KGFLR +        G R  +  G +D Q NC  RL PL++ F G  +        + + VE  TRVTQ+ D AV W + +A VL  ++  G  ++ A++E L    D +    E      EE  +      V     QV  L    E    +   V+ LGKNCH PNS QT +HA L     R+    P+  SL P                             ALF   +R A+REGGCCASR G  GA LG +L   C      +P  WR     +   R+   +I  +RH   R
Sbjct:   21 LEAEADELHREAQRLNKLQQFAASKTAYKQFRARDDDAI--ALALEIANLAAQTRG--TGKDQEDALLAARGFCARPQPYASLPNVTEEE----------------------QASLRQRLLGAVLGAVVGDAAATGVQWVYDPDELAG-YEAR----------------------------------------------VQAQGGVGLEYLDPPANAHFEYEVGRNSPYGEQALLLLKALAGDEGLDTWSYAQRFADHFGGDWHVRTGGYRDASCKGFLRNY------ALGLRPPES-GAKDKQINCCARLAPLLLAFAGHPD--------LDQIVEACTRVTQNHDEAVAWARLSARVLEGVV-RGADVDQAVKEALL---DAQRLDAELDDPASEELYL------VAGHLYQVRTLSFSSE----IPDAVERLGKNCHTPNSYQTPVHAVLSVLRRRADCLSPTTESLAP-------------------------ERAQALFAECMRGAMREGGCCASRCGVAGALLGAYLAGRCGSFEEFLPPSWRARTLAYAAARRWALQIDALRHTAPR 467          
BLAST of NO08G03920 vs. NCBI_GenBank
Match: XP_013899668.1 (hypothetical protein MNEG_7312 [Monoraphidium neglectum] >KIZ00649.1 hypothetical protein MNEG_7312 [Monoraphidium neglectum])

HSP 1 Score: 186.4 bits (472), Expect = 2.600e-43
Identity = 166/534 (31.09%), Postives = 214/534 (40.07%), Query Frame = 0
Query:   57 LEAEADRLHKLAQRLNKEGKYEDAKITYKEMYAVEDETLRQAAAVG---IARATAGRRGER-SGKDEGHESCNTLQPLPPFRRRQTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLGAVXXXXVGDAAAMGIHWIYAPEELQRLWEARXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGLEFYQPPQSPFF-SYPHGRSSPYGEQTILLLSSLHRNCGLDPFLYAQAYARQYGKGWEGYRDASTKGFLRRWYEEGGAREGWRDGDRWGVRDWQANCFTRLPPLVVGFGGGEEEGGEGERSMLRAVEDATRVTQDDDRAVMWGKGAAGVLSRIIFEGKTIEMAIREVLE--AFGDPKTPLGERGREIEEERVVEGLKKEVTRAFEQVLFLGVQEEGRTDVGGTVKLLGKNCHLPNSLQTALHAALFYAHGRSWPSPLSLVPLSWTTAAVCEXXXXXXXXXXXXXXXXXXXALFKRTIRAAIREGGCCASRAGWVGACLGGWLGLECVPVEWR 584
            LEA A   H  AQ LNK  + E+A   Y EM  ++   L  A ++G     + ++G  G   +   +      +L P+ P+  +                               LGAV    VGDAAAMG+ WIY+ E L+ L  AR                                                    AGLEFY+PPQSPF   Y  GR SPYGE+  +LL SL R  GLD   YA+ YA  +G+G++GYR+AST GFLR  Y  G A          G  D QA+C  RL PLV  F         G   ++R V  ATR TQ+ D A  W    A VL  ++  G  +  A+    +  A G  + P  ER         +  L + V         L +++     V   V  LG+NCH+PN+  T LHAAL     + W                                     A F   IR A+  GGCCASRAG+ GACLG  LG   VP  WR
Sbjct:   29 LEAAAMSAHLEAQALNKLQRCEEANAKYDEMRRLDARALELANSLGCPSCRKPSSGAAGATPAAAGDAAADYISLHPVTPWPAQAA----------------------PGAAARALGAVLGAAVGDAAAMGVQWIYSLERLEDLLAAR---------------------------------------------REAEGPAAGLEFYEPPQSPFLPGYATGRHSPYGEEAAVLLRSLAREGGLDCGAYAELYAETFGEGFDGYRNASTTGFLRN-YSRGMAPPA------TGAEDAQADCVARLAPLVAAFA--------GHPRLMRLVAAATRTTQNTDDAEAWACAGAAVLEGLVLRGAGMADAVAAAADELAAGSGRLPACER------HAAIAALLRRV---------LALRDAPHAAV---VSDLGRNCHMPNAALTPLHAALH----QEW-------------------------LAQRRGGAAGGEAAFVDGIRGALAAGGCCASRAGFAGACLGAMLGPGAVPAGWR 433          
BLAST of NO08G03920 vs. NCBI_GenBank
Match: GAX80225.1 (hypothetical protein CEUSTIGMA_g7663.t1 [Chlamydomonas eustigma])

HSP 1 Score: 181.8 bits (460), Expect = 6.400e-42
Identity = 162/563 (28.77%), Postives = 225/563 (39.96%), Query Frame = 0
Query:   57 LEAEADRLHKLAQRLNKEGKYEDAKITYKEMYAVEDETLRQAAAVGIARATAGR-------------RGERSGKDEGHESCNTLQPLPPFRRRQTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLGAVXXXXVGDAAAMGIHWIYAPEELQRLWEARXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGLEFYQPPQSPFFSYPHGRSSPYGEQTILLLSSLHRNCG--LDPFLYAQAYARQYGK-GWEGYRDASTKGFLRRWYEEGGAREGWRDGDRWGVRDWQANCFTRLPPLVVGFGGGEEEGGEGERSMLRAVEDATRVTQDDDRAVMWGKGAAGVLSRIIFEGKTIEMAIREVLEAFGDPKTPLGERGREIEEERVVEGLKKEVTRAFEQVLFLGVQEEGRTDVGGTVKLLGKNCHLPNSLQTALHAALFYAHGRSWPSPLSLVPLSWTTAAVCEXXXXXXXXXXXXXXXXXXXALFKRTIRAAIREGGCCASRAGWVGACLGGWLGLECVPVEWRKEVNGFDQIRKEVEEIIRHR 604
            LE  A   H+ AQ LN +G Y+ A+  Y EM+ +EDE  + +  VG  +   G                + +   EG +S                                            +GA+    V DAAAMG+HWIY  + +++L   R                                                     GLEF  PP+SPF++Y  GR+SPYGEQ  LLL SL  +CG  LD   YA+A++  +G   ++GYRD S KGFLR  Y  G            G  D QANC  RL PLV  F         G+  +++ VE  TRVTQ+ D A  W    A +L  I+  G + E A+R  +           E G E  E R        V  A E  L L V E G +   G ++L G+NCH+PN+L T L   L     ++   P                                  A F   IR++++EGGCCASR+ +VGAC+G   G++ +P EW  +     ++ + +E I R R
Sbjct:   79 LEKAAAEAHQRAQELNIKGDYKAAQEAYAEMHKLEDEASQLSKQVGCVQCVLGAPTTTRPPPDGILLAVDGTAAQEGTDSSCPQYDERLIELYSQRYMPPPWPASPPTSGTSVPGHDLSVEQRAIGAMRGAAVADAAAMGVHWIYDLDLIRQLETER-----------------------------------------------REQGEQGLEFMNPPRSPFYTYQSGRNSPYGEQAFLLLKSL-ADCGGCLDCLAYAEAFSAHFGSDAFDGYRDVSCKGFLRN-YSRGLL------PPLTGADDAQANCTARLAPLVATF--------VGDPRLMQLVEMVTRVTQNTDAACAWASIGAAILEGIML-GSSAEHAVRSAVHDLEQ------EAGVERVEGRFKGLWGLSVKVAEELKLTLSVAESGVSVPEGVIQLGGRNCHMPNALTTPLLVVLATERKKNATQP---------------------------------EADFIEAIRSSLKEGGCCASRSSYVGACVGALSGVKAIPNEWSIKYLKLKELEESIERICRSR 538          
BLAST of NO08G03920 vs. NCBI_GenBank
Match: PNH12277.1 (Crystallin J1A [Tetrabaena socialis])

HSP 1 Score: 179.9 bits (455), Expect = 2.400e-41
Identity = 196/591 (33.16%), Postives = 245/591 (41.46%), Query Frame = 0
Query:   57 LEAEADRLHKLAQRLNKEGKYEDAKITYKEMYAVEDETLRQAAAVGIARATAGRRGERSGKDEGHESCNT----------LQPLPPFRRRQTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLGAVXXXXVGDAAAMGIHWIYAPEELQRLWEARXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGLEFYQPPQSPFFSYPHGRSSPYGEQTILLLSSLHRNCGLDPFLYAQAYARQYG--KGWEGYRDASTKGFLRRWYEEGGAREGWRDGDRWGVRDWQANCFTRLPPLVVGFG---------------------GGEEEGGEGERSMLRAVEDATRVTQDDDRAVMWGKGAAGVLSRIIFEGKTIEMAIREVLEAFGDPKTPLGERGREIEEERVVEGLKKEVTRAFEQVLFLGVQEEGRTDVGGTVKLLGKNCHLPNSLQTALHAALFYAHGRSWPSPLSLVPLSWTTAAVCEXXXXXXXXXXXXXXXXXXXALFKRTIRAAIREGGCCASRAGWVGACL---------GGWLGLECVPVEWRKEVNGFDQIRKEVEEIIRHRRR 606
            LE +A  +H  AQ LNKEG++ +A+  Y  M+ +EDE    AA VG      G   ++    E    C T          LQP  P+    T      XXXXXXXXXXXXX          +G V    + DAAAMG+HW+Y    L+ L   R                                                     GLEF  PP+SPF++Y  GR+SPYGEQT+ LL SL    GL    YA  +A  +G   G++GYRD STKGFLR                  G  D QANC  RL PL                           G + GG     +LR VE ATRVTQ+ D AV W    A VL R++  G  +  A+ + L     P+  L               L  E+     +VL L       T V   V  LG+NCH+PN+LQT L   L+  H  +                   XXXXXXXXXXXX         F   +R A+REGGCCASRA +VGACL         GG  G E +P  W  +    +Q+R    +I   R R
Sbjct:   20 LEQQALDMHDRAQLLNKEGRFTEAQEAYAAMHRLEDEASELAATVGCVVCVLGDAPQQDASAE-PSLCTTDPAVFKPYYQLQPALPWPTAAT----AAXXXXXXXXXXXXXLPEAALRGRAVGCVLGSALADAAAMGVHWMYDLGALEELAAERRPQEAGREEEAGSPGPHTGLRREHPYGW-------------------------GLEFMDPPRSPFYAYASGRNSPYGEQTLALLRSLADQGGLHGGAYADTFAAVFGPDSGFDGYRDVSTKGFLRNHVR-------GMPPPLSGANDAQANCIARLAPLAAXXXXXXXXXXXXXXXXXXXXXXXRDGADAGGPA-AGLLRCVELATRVTQNTDAAVAWACVGAAVLERMLLGGSAL-AAVEQTLAELEGPQGRLAPH---------CGPLAPELAGHLRRVLQLRT-----TPVPEAVAELGRNCHMPNALQTPLLVVLYVEHLAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQAAVLPAEAFVWGVRLAVREGGCCASRAAYVGACLGALTAGGGVGGAGGGEDLPARWVAKYTAAEQVRSWALQICEARSR 557          
BLAST of NO08G03920 vs. NCBI_GenBank
Match: PNW85660.1 (hypothetical protein CHLRE_03g196950v5 [Chlamydomonas reinhardtii])

HSP 1 Score: 179.1 bits (453), Expect = 4.100e-41
Identity = 188/571 (32.92%), Postives = 247/571 (43.26%), Query Frame = 0
Query:   57 LEAEADRLHKLAQRLNKEGKYEDAKITYKEMYAVEDETLRQAAAVGIARATAGRRGERSGKDEGHESCN----------TLQPLPPFRRRQTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLGAVXXXXVGDAAAMGIHWIYAPEELQRLWEARXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGLEFYQPPQSPFFSYPHGRSSPYGEQTILLLSSLHRNCGLDPFLYAQAYARQY--GKGWEGYRDASTKGFLRRWYEEGGAREGWRDGDRWGVRDWQANCFTRLPPLVVGFGGGEEEGGEGE-----RSMLRAVEDATRVTQDDDRAVMWGKGAAGVLSRIIFEGKTIEMAIREVLEAFGDPKTPLGERGREIEEERVVEGLKKEVTRAFEQVLFLGVQEEGRTDVGGTVKLLGKNCHLPNSLQTALHAALFYAHGRSWPSPLSLVPLSWTTAAVCEXXXXXXXXXXXXXXXXXXXALFKRTIRAAIREGGCCASRAGWVGACLGGW-------LGLECVPVEWRKEVNGFDQIRKEVEEIIRHR 604
            LEAEA  +H  AQR NKEG++ +A+  Y  M+ +EDE    AA VG      G   + + +D     CN           L P  P++               XXXXXXXXXXXXXXXXXX  AV    + DAAAMG+HW+Y    + + +EA                                                      G EF +PP+SPF++Y  GR+SPYGEQT++LL SL  + GL+   YA  +   +  G G++GYRD STKGFLR +     AR         G  D QAN   RL PLV  FG G +  G GE       +L+ VE ATRVTQ+   AV W    A VL  ++  G   E A+REV+     P+  L      +  E + + L K             V E     V      LG+NCH+PN+LQT L   +   H       L              XXXX                 +   +R A+REGGCCASRA +VGACLG         +G   +P +W  +     Q +   E ++  R
Sbjct:   16 LEAEAMEMHDQAQRFNKEGRFAEAQAAYAAMHKLEDEASALAAKVGCVACVLG--DDVAQQDAEPSLCNLDPDTLLAYQCLHPALPWQ---------------XXXXXXXXXXXXXXXXXXXSAVVGSSLADAAAMGVHWVYDLGIMDQ-YEAERRAAAGEASMSGVGHSGHPFTY-------------------------------GCEFMEPPRSPFYAYASGRNSPYGEQTLVLLRSLAESGGLECGHYADTFEATFGPGSGFDGYRDVSTKGFLRNY-----ARA--MPPPLSGANDAQANAIARLAPLVAAFGLGMQSPGGGEDDEQPAGLLKCVELATRVTQNTAAAVAWACAGARVL-ELVLGGWRAEAAVREVVADLRSPQGLLVPYCGPLAAE-LADHLAK-------------VHELRGVPVPEATAALGRNCHMPNALQTPLQVVMHVEH-------LVEQQXXXXXXXXXXXXXXKGGASAARAGAQLPAEAYVWGVRLAVREGGCCASRAAYVGACLGAMVAGAEEGVGAGALPADWLAKYTSAAQAQAWAELVVAAR 508          
BLAST of NO08G03920 vs. NCBI_GenBank
Match: XP_002956131.1 (hypothetical protein VOLCADRAFT_97046 [Volvox carteri f. nagariensis] >EFJ42871.1 hypothetical protein VOLCADRAFT_97046 [Volvox carteri f. nagariensis])

HSP 1 Score: 174.5 bits (441), Expect = 1.000e-39
Identity = 153/503 (30.42%), Postives = 197/503 (39.17%), Query Frame = 0
Query:   57 LEAEADRLHKLAQRLNKEGKYEDAKITYKEMYAVEDETLRQAAAVGIARATAGRRGERSGKDEGHESCNTLQP--LPPFRRRQTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLGAVXXXXVGDAAAMGIHWIYAPEELQRLWEARXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGLEFYQPPQSPFFSYPHGRSSPYGEQTILLLSSLHR-----------------------NCGLDPFLYAQAYARQYGKGWEGYRDASTKGFLRRWYEEGGAREGWRDGDRWGVRDWQANCFTRLPPLVVGFGGG--------------------------------------EEEGGEGERSMLRAVEDATRVTQDDDRAVMWGKGAAGVLSRIIFEGKTIEMAIREVLEAFGDPKTPLGERGREIEEERVVEGLKKEVTRAFEQVLFLGVQEEGRTDVGGTVKLLGKNCHLPNSLQTALHAAL 497
            LEAEA  +H+LAQRLNKEG++E+A+  Y  M+ +EDE    AA VG      G       +D+   S  TL P  L P+ +                                LG V    + DAAAMG+HW+Y    L  L + R                                                     GLEF  PP+SPF+SY  GR+SPYGEQT++LL SL                         +CG    L+AQ +    G G++GYRD STKGFLR  Y  G            G  D QANC  RL PLV  F  G                                      + +GG  +  +LR VE ATRVTQ+ D AV W    A VL +++  G T E A+R V+     P+  L            V G+  E+     + L L  +      V   V  LG+NCH+PN+LQT LH  L
Sbjct:   16 LEAEAIAMHELAQRLNKEGRFEEAQAAYASMHRLEDEASELAARVGCVACVLG----EPSQDQDQPSLCTLDPAVLVPYEQ----------LIAVPPWRSLSSPGSEALEARALGCVVGSALADAAAMGVHWVYDMTVLDDLEQDRRQQQLTATAITLDVSQSVSPPSSSSAISASCLPSHPFTF--------------GLEFMDPPRSPFYSYTSGRNSPYGEQTLVLLRSLAESAGGGGSEDGSPRGSAVAGPVGLHCGQYAALFAQTFGP--GSGFDGYRDVSTKGFLRN-YSRG------LPPPLSGANDAQANCVARLAPLVAAFAAGPTAASSSPSSYPCDDATEGNAAAGNTEYGTAGSGAAVADVDGGTAD-PLLRCVELATRVTQNTDAAVAWATAGAAVLEQLLL-GSTAEAAVRHVIHDLRSPQGRLAP---------FVWGMGSEIAGHLARALELRTE-----PVPVAVAALGRNCHMPNALQTPLHVVL 465          
BLAST of NO08G03920 vs. NCBI_GenBank
Match: XP_001693293.1 (predicted protein [Chlamydomonas reinhardtii])

HSP 1 Score: 172.6 bits (436), Expect = 3.900e-39
Identity = 187/561 (33.33%), Postives = 241/561 (42.96%), Query Frame = 0
Query:   57 LEAEADRLHKLAQRLNKEGKYEDAKITYKEMYAVEDETLRQAAAVGIARATAGRRGERSGKDEGHESCNTLQPLPPFRRRQTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLGAVXXXXVGDAAAMGIHWIYAPEELQRLWEARXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGLEFYQPPQSPFFSYPHGRSSPYGEQTILLLSSLHRNCGLDPFLYAQAYARQY--GKGWEGYRDASTKGFLRRWYEEGGAREGWRDGDRWGVRDWQANCFTRLPPLVVGFGGGEEEGGEGE-----RSMLRAVEDATRVTQDDDRAVMWGKGAAGVLSRIIFEGKTIEMAIREVLEAFGDPKTPLGERGREIEEERVVEGLKKEVTRAFEQVLFLGVQEEGRTDVGGTVKLLGKNCHLPNSLQTALHAALFYAHGRSWPSPLSLVPLSWTTAAVCEXXXXXXXXXXXXXXXXXXXALFKRTIRAAIREGGCCASRAGWVGACLGGW-------LGLECVPVEWRKEVNGFDQIRKEVEEIIRHR 604
            LEAEA  +H  AQR NKEG++ +A+  Y  M+ +EDE    AA VG      G                                   XXXXXXXXXXXXXXXXXXXXXXX  AV    + DAAAMG+HW+Y    + + +EA                                                      G EF +PP+SPF++Y  GR+SPYGEQT++LL SL  + GL+   YA  +   +  G G++GYRD STKGFLR +     AR         G  D QAN   RL PLV  FG G +  G GE       +L+ VE ATRVTQ+   AV W    A VL  ++  G   E A+REV+     P+  L      +  E + + L K             V E     V      LG+NCH+PN+LQT L   +   H       L              XXXX                 +   +R A+REGGCCASRA +VGACLG         +G   +P +W  +     Q +   E ++  R
Sbjct:   16 LEAEAMEMHDQAQRFNKEGRFAEAQAAYAAMHKLEDEASALAAKVGCVACVLG----------------------------------DXXXXXXXXXXXXXXXXXXXXXXXXSAVVGSSLADAAAMGVHWVYDLGIMDQ-YEAERRAAAGEASMSGVGHSGHPFTY-------------------------------GCEFMEPPRSPFYAYASGRNSPYGEQTLVLLRSLAESGGLECGHYADTFEATFGPGSGFDGYRDVSTKGFLRNY-----ARA--MPPPLSGANDAQANAIARLAPLVAAFGLGMQSPGGGEDDEQPAGLLKCVELATRVTQNTAAAVAWACAGARVL-ELVLGGWRAEAAVREVVADLRSPQGLLVPYCGPLAAE-LADHLAK-------------VHELRGVPVPEATAALGRNCHMPNALQTPLQVVMHVEH-------LVEQQXXXXXXXXXXXXXXKGGASAARAGAQLPAEAYVWGVRLAVREGGCCASRAAYVGACLGAMVAGAEEGVGAGALPADWLAKYTSAAQAQAWAELVVAAR 481          
BLAST of NO08G03920 vs. NCBI_GenBank
Match: XP_004993983.1 (hypothetical protein PTSG_05409 [Salpingoeca rosetta] >EGD73702.1 hypothetical protein PTSG_05409 [Salpingoeca rosetta])

HSP 1 Score: 151.8 bits (382), Expect = 7.100e-33
Identity = 114/340 (33.53%), Postives = 151/340 (44.41%), Query Frame = 0
Query:  168 LGAVXXXXVGDAAAMGIHWIYAPEELQRLWEARXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGLEFYQPPQSPFFSYPHGRSSPYGEQTILLLSSLHRNCGLDPFLYAQAYARQYGKGW----EGYRDASTKGFLRRWYEEGGAREGWRDGDRWGVRDWQANCFTRLPPLVVGFGGGEEEGGEGERSMLRAVEDATRVTQDDDRAVMWGKGAAGVLSRIIFEGKTIEMAIREVLEAFGDPKTPLGERGREIEEERVVEGLKKEVTRAFEQVLFLG-----VQEEGRTDVGGTVKLLGKNCHLPNSLQTALHAALFY 499
            LGAV    VGDA+A G+ W+Y+PE+L+R +EA+                                                    AGLEF  PP +  F+Y  GR+SPYGEQ ++LL +L ++  LD FLYA+ +A  +G  W     GYRDAS KGFLR W        G R  +  G RD Q NC TRL PL+  F G +        ++   VE  TRVTQ+   AV W    A VL  ++  G     A++  L+               +EE     G  +E   A E  L  G     ++     DV   V  LG+NCH PNS QT +HA L +
Sbjct:  314 LGAVLGAVVGDASANGVQWVYSPEKLRR-FEAQ---------------------------------------------QVRRHGHAGLEFMDPPANEHFTYEVGRNSPYGEQALVLLEALAKDGKLDTFLYARRFAAAFGGNWHVRCNGYRDASCKGFLRNW------ALGKRPPES-GARDKQINCITRLAPLLCAFSGAD------TGTLHAVVEQTTRVTQNMPEAVAWATLGAYVLDPVLARGTHPHDAVQGALQ--------------RVEERVARAGTAREEVAADELYLVAGHMYQPLRWSVWADVREAVDELGRNCHTPNSYQTPVHAVLHH 580          
BLAST of NO08G03920 vs. NCBI_GenBank
Match: PRW20969.1 (crystallin J1A-like [Chlorella sorokiniana])

HSP 1 Score: 128.6 bits (322), Expect = 6.400e-26
Identity = 112/352 (31.82%), Postives = 138/352 (39.20%), Query Frame = 0
Query:  168 LGAVXXXXVGDAAAMGIHWIYAPEELQRLWEARXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGLEFYQPPQSPFFSYPHGRSSPYGEQTILLLSSLHRNCGLDPFLYAQAYARQYGKGWEGYRDASTKGFLRRWYEEGGAREGWRDGDRWGVRDWQANCFTRLPPLVVGFGGGEEEGGEGERSMLRAVEDATRVTQDDDRAVMWGKGAAGVLSRIIFEGKTIEMAIREVLE------AFGDPKTPLGERGREIEEERVVEGLKKEVTRAFE-----------------QVLFLGVQEEGRTDVGGTVKLLGKNCHLPNSLQTALHAAL 497
            L AV    +GDAAA    W+Y+  +LQ L + R                                                    AGLEF+ PPQ PFF Y  G +SPYGEQT  L  SL +  G D   YA      +G G+ GYRD STK FLRR Y  G            G  D QAN FTRLPPLV  + G       G   +L AVE   RVTQ+D  AV +G  AA VL  ++  G ++  A+   +E            +P    G+ ++ E   E    +   A E                     L   E            LG+NCHLPNSLQT L   L
Sbjct:  123 LHAVLGYALGDAAACSCQWVYSEAQLQTLAQGR----------------------------------------------------AGLEFFHPPQCPFFDYCLGSASPYGEQTAALAESLVKAGGFDCCRYAADLFAAFGPGFGGYRDRSTKSFLRR-YAAGALPPD------TGSPDDQANAFTRLPPLVALYAGA------GRGRLLAAVECMIRVTQNDPVAVAYGCAAALVLEAVLL-GASVAAAVAGTVEWLHRRAGLVPEASPADTAGQPLQAETAQEAATDDFLAALEVGALAKPVVPPALWGEVADRLLQAAELAPLPPLEVATRLGRNCHLPNSLQTPLQILL 408          
The following BLAST results are available for this feature:
BLAST of NO08G03920 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
KXZ44235.16.200e-4535.22hypothetical protein GPECTOR_70g465 [Gonium pector... [more]
XP_001748921.18.100e-4531.53hypothetical protein [Monosiga brevicollis MX1] >E... [more]
XP_013899668.12.600e-4331.09hypothetical protein MNEG_7312 [Monoraphidium negl... [more]
GAX80225.16.400e-4228.77hypothetical protein CEUSTIGMA_g7663.t1 [Chlamydom... [more]
PNH12277.12.400e-4133.16Crystallin J1A [Tetrabaena socialis][more]
PNW85660.14.100e-4132.92hypothetical protein CHLRE_03g196950v5 [Chlamydomo... [more]
XP_002956131.11.000e-3930.42hypothetical protein VOLCADRAFT_97046 [Volvox cart... [more]
XP_001693293.13.900e-3933.33predicted protein [Chlamydomonas reinhardtii][more]
XP_004993983.17.100e-3333.53hypothetical protein PTSG_05409 [Salpingoeca roset... [more]
PRW20969.16.400e-2631.82crystallin J1A-like [Chlorella sorokiniana][more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL109nonsL109Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR083ncniR083Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR141ngnoR141Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK008606NSK008606Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO08G03920.1NO08G03920.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|553198gene_3729Nannochloropsis oceanica (N. oceanica CCMP1779)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO08G03920.1NO08G03920.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO08G03920 ID=NO08G03920|Name=NO08G03920|organism=Nannochloropsis oceanica|type=gene|length=1833bp
ATGTCATCGACCGTCATTTCGTCGTCATCTTTCTGTTCCTGCTCCTCACT
CTTACCCGCCGACTCCTCCATCCTTCCCAAACCACCAACCTCCTCTCCCC
ATCCGTCCTCCTGCTCCTCCTGCTGCTGCTCCTCCTCCTCCTTCTCATCC
TCCTCTTCCATTGCCGTGCTCGAAGCAGAAGCCGACAGGCTGCACAAACT
GGCTCAACGCCTCAATAAGGAAGGAAAATACGAAGATGCTAAAATTACGT
ACAAGGAGATGTATGCGGTGGAAGACGAGACGCTGCGGCAAGCAGCGGCA
GTGGGTATAGCACGAGCAACAGCAGGACGTCGAGGGGAGAGGAGCGGAAA
GGATGAGGGTCACGAGTCCTGTAATACTCTGCAGCCTCTTCCACCTTTTC
GAAGACGACAAACACAAAGGGAGAAAGGGCGATCGAGAGAAAAGGAAGAA
GAAGAGGTAGCTCAAGAAAATAAAGAGGAGGAGCAAATAGTTTCCCGTGC
GTTGGGCGCCGTCTTGGGGAGTGTGGTGGGGGACGCAGCAGCTATGGGCA
TTCACTGGATCTATGCTCCGGAGGAACTGCAGAGACTATGGGAGGCAAGA
CAAGAGGAGGAGAGGGAGAAGAAAAAGAAGGCGGAAGGGAGGAGGAACGA
AGCAGAGCAGCAGAAATCGGGTGAGGAAAAGGAGCAAAGTGCTCATACCC
TTGCCACCATCACAACTACAACTACCACCATCGCCGAAGACGACACAATT
GACGACGCAGGCCTCGAGTTTTATCAGCCGCCCCAATCACCCTTCTTCTC
CTACCCTCACGGTCGGTCCTCGCCCTACGGAGAACAGACAATCCTCCTCC
TCAGCTCCCTACATCGAAACTGCGGCCTCGATCCCTTCCTTTACGCTCAG
GCATATGCCAGGCAATATGGAAAAGGGTGGGAGGGTTATAGAGATGCGTC
GACGAAGGGATTTTTGAGGCGATGGTATGAAGAAGGAGGGGCTAGGGAGG
GATGGAGGGATGGGGATAGGTGGGGGGTGCGGGATTGGCAAGCTAATTGC
TTCACCAGGTTGCCGCCATTGGTGGTAGGATTTGGAGGAGGAGAGGAAGA
AGGGGGAGAGGGGGAGAGATCAATGTTGCGAGCGGTGGAAGATGCGACCC
GGGTGACTCAAGACGATGATCGGGCGGTGATGTGGGGGAAGGGAGCAGCA
GGAGTGCTGTCTAGGATTATTTTTGAGGGAAAAACCATTGAGATGGCCAT
AAGGGAGGTATTGGAGGCGTTCGGAGATCCAAAGACGCCGCTGGGGGAGA
GAGGGAGGGAAATAGAGGAGGAAAGGGTGGTGGAGGGGTTGAAAAAGGAG
GTGACAAGGGCGTTCGAACAAGTGCTTTTTTTGGGTGTGCAAGAGGAGGG
CAGGACGGACGTGGGAGGGACCGTTAAATTGTTGGGGAAGAATTGTCACT
TGCCGAATAGCCTACAGACGGCTTTGCATGCCGCATTGTTTTATGCGCAT
GGACGTTCGTGGCCGTCGCCCCTCTCTCTGGTCCCTCTGTCGTGGACAAC
AGCAGCGGTCTGTGAGCAGCAGCAACAGCAGGAGCAGGAGCAGGAGCAGG
AGAGGGATCGGAGGGAGAAACAGGCGTTGTTCAAGAGAACCATTCGTGCT
GCCATTCGGGAGGGAGGTTGCTGTGCGTCACGGGCGGGATGGGTGGGTGC
TTGTTTGGGCGGGTGGCTGGGTTTGGAATGTGTGCCGGTCGAGTGGCGGA
AGGAGGTAAATGGATTCGACCAGATCAGGAAGGAGGTGGAGGAGATCATA
AGGCATAGGAGGAGGAGAAGGATGCAGGCCTAA
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protein sequence of NO08G03920.1

>NO08G03920.1-protein ID=NO08G03920.1-protein|Name=NO08G03920.1|organism=Nannochloropsis oceanica|type=polypeptide|length=611bp
MSSTVISSSSFCSCSSLLPADSSILPKPPTSSPHPSSCSSCCCSSSSFSS
SSSIAVLEAEADRLHKLAQRLNKEGKYEDAKITYKEMYAVEDETLRQAAA
VGIARATAGRRGERSGKDEGHESCNTLQPLPPFRRRQTQREKGRSREKEE
EEVAQENKEEEQIVSRALGAVLGSVVGDAAAMGIHWIYAPEELQRLWEAR
QEEEREKKKKAEGRRNEAEQQKSGEEKEQSAHTLATITTTTTTIAEDDTI
DDAGLEFYQPPQSPFFSYPHGRSSPYGEQTILLLSSLHRNCGLDPFLYAQ
AYARQYGKGWEGYRDASTKGFLRRWYEEGGAREGWRDGDRWGVRDWQANC
FTRLPPLVVGFGGGEEEGGEGERSMLRAVEDATRVTQDDDRAVMWGKGAA
GVLSRIIFEGKTIEMAIREVLEAFGDPKTPLGERGREIEEERVVEGLKKE
VTRAFEQVLFLGVQEEGRTDVGGTVKLLGKNCHLPNSLQTALHAALFYAH
GRSWPSPLSLVPLSWTTAAVCEQQQQQEQEQEQERDRREKQALFKRTIRA
AIREGGCCASRAGWVGACLGGWLGLECVPVEWRKEVNGFDQIRKEVEEII
RHRRRRRMQA*
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Synonyms
Publications