NO08G03880, NO08G03880 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO08G03880 vs. NCBI_GenBank
Match: EWM26850.1 (urease accessory protein [Nannochloropsis gaditana]) HSP 1 Score: 326.6 bits (836), Expect = 8.100e-86 Identity = 181/301 (60.13%), Postives = 223/301 (74.09%), Query Frame = 0 Query: 15 VSSSPPSPALAWCVWQMMDSNLPTGGFAHSYGLEAAMQMGQFELKGGASGDKEARVAGLLVFARQTVQQQAMLLLPLVRAAYAAAEAMEVPGRPGSSPPSAQPLVMAWASLDRQCHALLTTEGGRRASVSQGQALLRLACDNFPTISPQNRRWLCHARDQVRGRPPAK----AAGGSEGRNGAVPPQLLPVKGHQAPLFGWLCRALGVDVITTSRMFCYLVLRDLMAAATRLGLVGPLQAVRLQMLMYQDAEAIVTRCLEEGAR------REERREPRQDNPLLDILQGAHEKLYSRLFIS 306 + S PS ++W +WQ++DSNLPTGGFAHSYGLEAA+Q+ F+L+ S D+E RV GLL FARQT++QQA LLLP+V AA+ AA+ + + S+ +V WA+LD++CHAL+TTEGGRRAS +QG ALLRLACDN P++S Q+ +WL ARD +RGR + AAG SE + +L +GHQAP+FGWLC+ALGVD +T RMFCYLVLRDLMAAATRLGLVGPL AVRLQM +Y DAEA+V R LE+ A +E R PRQ+NPLLDILQGAHEKLYSRLFIS Sbjct: 1 MESYAPS-TVSWVIWQLLDSNLPTGGFAHSYGLEAALQLKHFDLQ---SVDEEMRVTGLLAFARQTMEQQASLLLPMVSAAHHAAKDATALLK-CTDAGSSVSMVSRWATLDKECHALITTEGGRRASTAQGLALLRLACDNIPSLSSQHCQWLRTARDLIRGRVGYRYRDDAAGESESLGVSHDMSILSARGHQAPVFGWLCQALGVDAVTCFRMFCYLVLRDLMAAATRLGLVGPLAAVRLQMTLYGDAEAVVGRFLEQEASERATGGKEGGRGPRQENPLLDILQGAHEKLYSRLFIS 296
BLAST of NO08G03880 vs. NCBI_GenBank
Match: EFJ26720.1 (hypothetical protein SELMODRAFT_97029 [Selaginella moellendorffii] >EFJ27010.1 hypothetical protein SELMODRAFT_96579 [Selaginella moellendorffii]) HSP 1 Score: 151.4 bits (381), Expect = 4.600e-33 Identity = 106/280 (37.86%), Postives = 136/280 (48.57%), Query Frame = 0 Query: 26 WCVWQMMDSNLPTGGFAHSYGLEAAMQMGQFELKGGASGDKEARVAGLLVFARQTVQQQAMLLLPLVRAAYAAAEAMEVPGRPGSSPPSAQPLVMAWASLDRQCHALLTTEGGRRASVSQGQALLRLACDNFPTISPQNRRWLCHARDQVRGRPPAKAAGGSEGRNGAVPPQLLPVKGHQAPLFGWLCRALGVDVITTSRMFCYLVLRDLMAAATRLGLVGPLQAVRLQMLMYQDAEAIVTRCLEEGARREERREPRQDNPLLDILQGAHEKLYSRLFIS 306 W VWQ++DS PTGGFAHSYGLEAA+Q G S K L F + T++ LLLP V A++ P V W LDR +A L+ RRAS SQG ALLR A +P ++ L R VR GR GH A +FG +C L +D +T R + YL LRD+++AATRL LVGPLQA +Q + EA+V +C + G + Q +PLLD Q H+ L+SRLF S Sbjct: 13 WVVWQLVDSFFPTGGFAHSYGLEAAVQAGL------VSDSK-----SLDTFIKSTLENSGSLLLPFVSASFKL------------------PDVAGWIELDRLLNATLSNHVARRASSSQGSALLRTAATVYPDLAE-----LGELRGVVRA-----------GR----------ASGHHAGVFGIVCGLLKLDALTCQRAYLYLTLRDVLSAATRLNLVGPLQAAAMQQSLRGFGEAVVRKCADRGV-----EDACQVSPLLDTAQACHDHLFSRLFCS 232
BLAST of NO08G03880 vs. NCBI_GenBank
Match: XP_024532835.1 (urease accessory protein F [Selaginella moellendorffii] >XP_002972093.2 urease accessory protein F [Selaginella moellendorffii] >XP_002972634.2 urease accessory protein F [Selaginella moellendorffii]) HSP 1 Score: 151.4 bits (381), Expect = 4.600e-33 Identity = 106/280 (37.86%), Postives = 136/280 (48.57%), Query Frame = 0 Query: 26 WCVWQMMDSNLPTGGFAHSYGLEAAMQMGQFELKGGASGDKEARVAGLLVFARQTVQQQAMLLLPLVRAAYAAAEAMEVPGRPGSSPPSAQPLVMAWASLDRQCHALLTTEGGRRASVSQGQALLRLACDNFPTISPQNRRWLCHARDQVRGRPPAKAAGGSEGRNGAVPPQLLPVKGHQAPLFGWLCRALGVDVITTSRMFCYLVLRDLMAAATRLGLVGPLQAVRLQMLMYQDAEAIVTRCLEEGARREERREPRQDNPLLDILQGAHEKLYSRLFIS 306 W VWQ++DS PTGGFAHSYGLEAA+Q G S K L F + T++ LLLP V A++ P V W LDR +A L+ RRAS SQG ALLR A +P ++ L R VR GR GH A +FG +C L +D +T R + YL LRD+++AATRL LVGPLQA +Q + EA+V +C + G + Q +PLLD Q H+ L+SRLF S Sbjct: 30 WVVWQLVDSFFPTGGFAHSYGLEAAVQAGL------VSDSK-----SLDTFIKSTLENSGSLLLPFVSASFKL------------------PDVAGWIELDRLLNATLSNHVARRASSSQGSALLRTAATVYPDLAE-----LGELRGVVRA-----------GR----------ASGHHAGVFGIVCGLLKLDALTCQRAYLYLTLRDVLSAATRLNLVGPLQAAAMQQSLRGFGEAVVRKCADRGV-----EDACQVSPLLDTAQACHDHLFSRLFCS 249
BLAST of NO08G03880 vs. NCBI_GenBank
Match: XP_015626164.1 (PREDICTED: urease accessory protein F isoform X1 [Oryza sativa Japonica Group] >XP_015626166.1 PREDICTED: urease accessory protein F isoform X1 [Oryza sativa Japonica Group] >BAF07923.1 Os02g0168000 [Oryza sativa Japonica Group] >BAG97786.1 unnamed protein product [Oryza sativa Japonica Group] >BAS77169.1 Os02g0168000 [Oryza sativa Japonica Group]) HSP 1 Score: 142.5 bits (358), Expect = 2.200e-30 Identity = 111/299 (37.12%), Postives = 146/299 (48.83%), Query Frame = 0 Query: 6 PLPPASLNQVSSSPPSPALAWCVWQMMDSNLPTGGFAHSYGLEAAMQMGQFELKGGASGDKEARVAGLLVFARQTVQQQAMLLLPLVRAAYAAAEAMEVPGRPGSSPPSAQPLVMAWASLDRQCHALLTTEGGRRASVSQGQALLRLACDNFPTI-SPQNRRWLCHARDQVRGRPPAKAAGGSEGRNGAVPPQLLPVKGHQAPLFGWLCRALGVDVITTSRMFCYLVLRDLMAAATRLGLVGPLQAVRLQMLMYQDAEAIVTRCLEEGARREERREPRQDNPLLDILQGAHEKLYSRLF 304 P AS+NQ S W WQ++DS LPTGGFAHSYGLEAAMQ + +E R F Q ++ LLLP V A SP +A W LD+ A+LT E R+AS+SQG ALLR+A F I S Q+ R + GS+ V H AP+FG +C +G D TT R + ++ +RD+++AATRL L+GPL A LQ + +DAE +V + + G E Q +PLLD LQG H ++SRLF Sbjct: 60 PTNAASMNQHS--------LWSQWQLLDSILPTGGFAHSYGLEAAMQSRM------VNNPEELR-----SFVVQVLENTGSLLLPFVCCA-------------NKSPDAA-----TWVKLDQLLEAMLTNEVSRKASMSQGSALLRVAASVFTEIQSLQDLR---------------QTFLGSK-----------IVSFHHAPIFGLICGLVGFDSETTQRAYMFVTMRDVISAATRLNLIGPLAASVLQHQVAEDAERMVQKWKDRGV-----EEATQTSPLLDALQGCHAYMFSRLF 290
BLAST of NO08G03880 vs. NCBI_GenBank
Match: XP_015626167.1 (PREDICTED: urease accessory protein F isoform X2 [Oryza sativa Japonica Group] >E0ZS46.1 RecName: Full=Urease accessory protein F; Short=AtUREF >Q0E3L5.2 RecName: Full=Urease accessory protein F; Short=AtUREF >ADK73997.1 UreF [Oryza sativa Indica Group] >BAS77170.1 Os02g0168000 [Oryza sativa Japonica Group]) HSP 1 Score: 142.5 bits (358), Expect = 2.200e-30 Identity = 111/299 (37.12%), Postives = 146/299 (48.83%), Query Frame = 0 Query: 6 PLPPASLNQVSSSPPSPALAWCVWQMMDSNLPTGGFAHSYGLEAAMQMGQFELKGGASGDKEARVAGLLVFARQTVQQQAMLLLPLVRAAYAAAEAMEVPGRPGSSPPSAQPLVMAWASLDRQCHALLTTEGGRRASVSQGQALLRLACDNFPTI-SPQNRRWLCHARDQVRGRPPAKAAGGSEGRNGAVPPQLLPVKGHQAPLFGWLCRALGVDVITTSRMFCYLVLRDLMAAATRLGLVGPLQAVRLQMLMYQDAEAIVTRCLEEGARREERREPRQDNPLLDILQGAHEKLYSRLF 304 P AS+NQ S W WQ++DS LPTGGFAHSYGLEAAMQ + +E R F Q ++ LLLP V A SP +A W LD+ A+LT E R+AS+SQG ALLR+A F I S Q+ R + GS+ V H AP+FG +C +G D TT R + ++ +RD+++AATRL L+GPL A LQ + +DAE +V + + G E Q +PLLD LQG H ++SRLF Sbjct: 29 PTNAASMNQHS--------LWSQWQLLDSILPTGGFAHSYGLEAAMQSRM------VNNPEELR-----SFVVQVLENTGSLLLPFVCCA-------------NKSPDAA-----TWVKLDQLLEAMLTNEVSRKASMSQGSALLRVAASVFTEIQSLQDLR---------------QTFLGSK-----------IVSFHHAPIFGLICGLVGFDSETTQRAYMFVTMRDVISAATRLNLIGPLAASVLQHQVAEDAERMVQKWKDRGV-----EEATQTSPLLDALQGCHAYMFSRLF 259
BLAST of NO08G03880 vs. NCBI_GenBank
Match: XP_020150594.1 (urease accessory protein F [Aegilops tauschii subsp. tauschii] >XP_020150595.1 urease accessory protein F [Aegilops tauschii subsp. tauschii] >XP_020150596.1 urease accessory protein F [Aegilops tauschii subsp. tauschii] >XP_020150597.1 urease accessory protein F [Aegilops tauschii subsp. tauschii]) HSP 1 Score: 142.1 bits (357), Expect = 2.800e-30 Identity = 110/298 (36.91%), Postives = 142/298 (47.65%), Query Frame = 0 Query: 10 ASLNQVSSSPPS--PALAWCVWQMMDSNLPTGGFAHSYGLEAAMQMGQFELKGGASGDKEARVAGLLVFARQTVQQQAMLLLPLVRAAYAAAEAMEVPGRPGSSPPSAQPLVMAWASLDRQCHALLTTEGGRRASVSQGQALLRLACDNFPTISPQNRRWLCHARDQVRGRPPAKAAGGSEGRNGAVPPQLLPVKGHQAPLFGWLCRALGVDVITTSRMFCYLVLRDLMAAATRLGLVGPLQAVRLQMLMYQDAEAIVTRCLEEGARREERREPRQDNPLLDILQGAHEKLYSRLFIS 306 ++++QV ++ S L W WQ++DS LPTGGFAHSYGLEAAMQ ++E L +F Q V LLLP V A S P AW LD+ A LT E GR+AS SQG ALLR+A F I P L R G V H AP+FG +C +G D TT R + ++ +RD+++AATRL L+GPL A LQ + DAE ++ + R + E Q PLLD LQG H ++SRLF S Sbjct: 19 SAISQVPATASSMHQQLFWSQWQLLDSILPTGGFAHSYGLEAAMQ-------SRIVNNQE----DLRLFLIQVVDNIGSLLLPFVFCA------------------SRSPDAAAWVKLDQLLDATLTNEVGRKASTSQGSALLRVAASVFTEIQP-----LQDLRRTFLGS--------------------TSVSFHHAPIFGLICGLVGFDSETTQRAYMFVAMRDVISAATRLNLIGPLAASVLQHQVAPDAEKMLQKW-----RDRDVSEASQTAPLLDALQGCHAYMFSRLFCS 257
BLAST of NO08G03880 vs. NCBI_GenBank
Match: EEC72566.1 (hypothetical protein OsI_06004 [Oryza sativa Indica Group] >EEE56386.1 hypothetical protein OsJ_05531 [Oryza sativa Japonica Group]) HSP 1 Score: 141.7 bits (356), Expect = 3.700e-30 Identity = 105/279 (37.63%), Postives = 139/279 (49.82%), Query Frame = 0 Query: 26 WCVWQMMDSNLPTGGFAHSYGLEAAMQMGQFELKGGASGDKEARVAGLLVFARQTVQQQAMLLLPLVRAAYAAAEAMEVPGRPGSSPPSAQPLVMAWASLDRQCHALLTTEGGRRASVSQGQALLRLACDNFPTI-SPQNRRWLCHARDQVRGRPPAKAAGGSEGRNGAVPPQLLPVKGHQAPLFGWLCRALGVDVITTSRMFCYLVLRDLMAAATRLGLVGPLQAVRLQMLMYQDAEAIVTRCLEEGARREERREPRQDNPLLDILQGAHEKLYSRLF 304 W WQ++DS LPTGGFAHSYGLEAAMQ + +E R F Q ++ LLLP V A SP +A W LD+ A+LT E R+AS+SQG ALLR+A F I S Q+ R + GS+ V H AP+FG +C +G D TT R + ++ +RD+++AATRL L+GPL A LQ + +DAE +V + + G E Q +PLLD LQG H ++SRLF Sbjct: 7 WSQWQLLDSILPTGGFAHSYGLEAAMQSRM------VNNPEELR-----SFVVQVLENTGSLLLPFVCCA-------------NKSPDAA-----TWVKLDQLLEAMLTNEVSRKASMSQGSALLRVAASVFTEIQSLQDLR---------------QTFLGSK-----------IVSFHHAPIFGLICGLVGFDSETTQRAYMFVTMRDVISAATRLNLIGPLAASVLQHQVAEDAERMVQKWKDRGV-----EEATQTSPLLDALQGCHAYMFSRLF 225
BLAST of NO08G03880 vs. NCBI_GenBank
Match: PAN04215.1 (hypothetical protein PAHAL_A00431 [Panicum hallii] >PAN04216.1 hypothetical protein PAHAL_A00431 [Panicum hallii]) HSP 1 Score: 141.7 bits (356), Expect = 3.700e-30 Identity = 104/285 (36.49%), Postives = 131/285 (45.96%), Query Frame = 0 Query: 23 ALAWCVWQMMDSNLPTGGFAHSYGLEAAMQMGQFELKGGASGDKEARVAGLLVFARQTVQQQAMLLLPLVRAAYAAAEAMEVPGRPGSSPPSAQPLVMAWASLDRQCHALLTTEGGRRASVSQGQALLRLACDNFPTISPQN--RRWLCHARDQVRGRPPAKAAGGSEGRNGAVPPQLLPVKGHQAPLFGWLCRALGVDVITTSRMFCYLVLRDLMAAATRLGLVGPLQAVRLQMLMYQDAEAIVTRCLEEGARREERREPRQDNPLLDILQGAHEKLYSRLFIS 306 +L W WQ++DS LPTGGFAHSYGLEAAMQ L F Q ++ LLLP V A S P AW LD+ A LT E GR+AS SQG ALLR+A F I RR L +++ V H AP+FG +C +G D T R + ++ +RD+ +AATRL L+GPL A LQ + DAE +V + R + E Q PLLD LQG H ++SRLF S Sbjct: 36 SLHWTQWQVLDSILPTGGFAHSYGLEAAMQSRMVN-----------NQEDLRSFVIQVLENTGSLLLPFVYCA------------------SKSPDTAAWVKLDQLLEATLTNEVGRKASTSQGSALLRVAASVFIEIQALQDLRRTLLSSKN---------------------------VSFHHAPIFGLICGLVGFDSETVQRAYMFVTMRDVFSAATRLNLIGPLAASVLQHQVAADAERMVQKW-----RDRDVSEASQTAPLLDALQGCHAYMFSRLFCS 259
BLAST of NO08G03880 vs. NCBI_GenBank
Match: NP_001339368.1 (urease accessory protein F [Zea mays] >XP_008643580.1 urease accessory protein F isoform X1 [Zea mays] >XP_008643581.1 urease accessory protein F isoform X1 [Zea mays] >ACF86859.1 unknown [Zea mays] >AQK68715.1 Urease accessory protein F [Zea mays]) HSP 1 Score: 141.4 bits (355), Expect = 4.800e-30 Identity = 111/297 (37.37%), Postives = 146/297 (49.16%), Query Frame = 0 Query: 9 PASLNQVSSSPPSPALAWCVWQMMDSNLPTGGFAHSYGLEAAMQMGQFELKGGASGDKEARVAGLLVFARQTVQQQAMLLLPLVRAAYAAAEAMEVPGRPGSSPPSAQPLVMAWASLDRQCHALLTTEGGRRASVSQGQALLRLACDNFPTISPQNRRWLCHARDQVRGRPPAKAAGGSEGRNGAVPPQLLPVKGHQAPLFGWLCRALGVDVITTSRMFCYLVLRDLMAAATRLGLVGPLQAVRLQMLMYQDAEAIVTRCLEEGARREERREPRQDNPLLDILQGAHEKLYSRLFIS 306 P+S N ++ + +L W WQ++DS LPTGGFAHSYGLEAAMQ D+E L F Q + LLLP V A A G SP A AWA LDR A LT E R+AS +QG ALLR+A F + A ++R + GS+ V H AP+FG +C +G D T R + ++ +RD+++AATRL L+GPL A LQ + DAE +V + R + E Q PLLD +QG H ++SRLF S Sbjct: 27 PSSSN--AAGGVNQSLHWTQWQILDSILPTGGFAHSYGLEAAMQ-------SRVVNDQE----DLRSFVVQVLDSAGSLLLPFVHCACA-----------GKSPGDA----AAWAKLDRLLDATLTNEVARKASAAQGSALLRVAASVFAEVP---------ALQELR-----RTLLGSKS-----------VSFHHAPVFGLVCGLVGFDGETAQRAYMFVTMRDVLSAATRLNLIGPLAASVLQHQLAPDAERMVRKW-----RDRDVSEASQTAPLLDAVQGCHAYMFSRLFCS 265
BLAST of NO08G03880 vs. NCBI_GenBank
Match: BAK02553.1 (predicted protein, partial [Hordeum vulgare subsp. vulgare]) HSP 1 Score: 140.6 bits (353), Expect = 8.200e-30 Identity = 111/295 (37.63%), Postives = 143/295 (48.47%), Query Frame = 0 Query: 16 SSSPPSPALAWCVWQMMDSNLPTGGFAHSYGLEAAMQMGQFELKGGASGDKEARVAG----LLVFARQTVQQQAMLLLPLVRAAYAAAEAMEVPGRPGSSPPSAQPLVMAWASLDRQCHALLTTEGGRRASVSQGQALLRLACDNFPTI-SPQNRRWLCHARDQVRGRPPAKAAGGSEGRNGAVPPQLLPVKGHQAPLFGWLCRALGVDVITTSRMFCYLVLRDLMAAATRLGLVGPLQAVRLQMLMYQDAEAIVTRCLEEGARREERREPRQDNPLLDILQGAHEKLYSRLFIS 306 +SS + L W WQ++DS LPTGGFAHSYGLEAAMQ +R+ L +F Q + LLLP V A G SP +A AW LD+ A LT E GR+AS SQG ALLR+A F I S Q+ R + GS V H AP+FG +C +G D TT R + ++ +RD+++AATRL L+GPL A LQ + DAE ++ + R + E Q PLLD LQG H ++SRLF S Sbjct: 38 ASSSMNQQLFWSQWQLLDSILPTGGFAHSYGLEAAMQ---------------SRIVNNPEDLWLFLIQVLDNIGSLLLPFVYCA-------------GRSPDAA-----AWVKLDQLLDATLTNEVGRKASTSQGSALLRVAASVFTEIQSLQDLR---------------RTFLGSTS-----------VSFHHAPIFGLICGLVGFDSETTQRAYMFVAMRDVISAATRLNLIGPLAASVLQHQVAPDAEKMLQKW-----RDRDVSEASQTAPLLDALQGCHAYMFSRLFCS 268 The following BLAST results are available for this feature:
BLAST of NO08G03880 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO08G03880 ID=NO08G03880|Name=NO08G03880|organism=Nannochloropsis oceanica|type=gene|length=918bpback to top protein sequence of NO08G03880.1 >NO08G03880.1-protein ID=NO08G03880.1-protein|Name=NO08G03880.1|organism=Nannochloropsis oceanica|type=polypeptide|length=306bpback to top Synonyms
Publications
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