NO08G03820, NO08G03820 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO08G03820 vs. NCBI_GenBank
Match: EWM26852.1 (iojap-like protein [Nannochloropsis gaditana]) HSP 1 Score: 356.3 bits (913), Expect = 1.500e-94 Identity = 249/416 (59.86%), Postives = 278/416 (66.83%), Query Frame = 0 Query: 70 SPAWPPSRKELAQMFEAGYESYEKNDKKGLGRGAMSWKECEDEGGHHDGEGEKEREGGAKGSTSLSPHHEGYDAEVVARQRRELLKATTAAAAARTGPTYLEQDELKARSEERGKDGVPAMGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSLENWTWAKPSRLSQXXXXXXXXXXXXXXXXXXXXTKSRLGHIPVVLRTLLTPAEVVQSLTELGGGGVTSVDIRGKGNFDAEAMIFASGRSGGHLRRMADALVGALKARGVEEERAPGVTGAEGYECDDWMIVDGGNVIVHLMEPSQRKALELEQFWGGAAEGMEEAKGGSVGEVVMPVVAGTSEAAWNQAHDELLERFPCDEGYAPENEGHSGRERELRRVLG-GQRGFTGR 485 SP+WPPSR+E+A+MFEAGYESYEKN++KG+GR AM+WKE HD G +E SLSPHH+GYDA + RQR EL KATTAA ART YL ++E KA E + G XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX SLE WTWA+PSRL+Q SR G IPV+ RTLL PAEVV++L LGG V SVDIRGKGNF+AEAMIFASGRSGGHLRRMAD +VGALKARG+EE APGVTGAEGY+C+DWMIVDGGNVIVHLMEPSQR AL LE FWG EG E KGG VG++VMPV A SE AW+QAHD LLER+P DE YAPE RVLG G +G R Sbjct: 58 SPSWPPSRQEMARMFEAGYESYEKNERKGMGRSAMAWKE-----DGHDEAGGQEXXXXXXXXXSLSPHHDGYDATEMTRQRMELSKATTAATLARTDAKYLNEEERKAHDAEMKALHAGIVAG----------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVAKAQAGSNSDPEKSLEKWTWARPSRLAQ--------------EEAQGRKTSRAGAIPVLPRTLLRPAEVVEALVALGGEDVASVDIRGKGNFNAEAMIFASGRSGGHLRRMADTVVGALKARGIEEMEAPGVTGAEGYDCEDWMIVDGGNVIVHLMEPSQRAALGLEGFWG---EGEEGRKGGRVGDLVMPVAATASEEAWSQAHDALLERYPADEEYAPEXXXXXXXXXXXXRVLGPGGKGMGER 441
BLAST of NO08G03820 vs. NCBI_GenBank
Match: CBN77191.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 97.1 bits (240), Expect = 1.700e-16 Identity = 58/140 (41.43%), Postives = 81/140 (57.86%), Query Frame = 0 Query: 295 IPVVLRTLLTPAEVVQSLTELGGGGVTSVDIRGKGNFDAEAMIFASGRSGGHLRRMADALVGALKARGVEEERAPGVTGAEGYECDDWMIVDGGNVIVHLMEPSQRKALELEQFWGGAAEGM---EEAKGGSVGEVVMPV 432 I V+ R LT EVV+++ GG V ++D+RGKG + M+F + + +RR+A+ +V ALK R + A G+TGAEG +CDDWM+VD N+IVH M R+ L+LE W A G + K G G V PV Sbjct: 84 IAVIPRVNLTVDEVVKAVEAQGGTDVRAIDLRGKGAGMGDFMVFCTAATPLQMRRLANMVVQALKQRKL--VNAMGITGAEGIDCDDWMLVDCDNLIVHFMTAEARQELDLETHWETVASGTALGSKRKKGEEGHVEDPV 221
BLAST of NO08G03820 vs. NCBI_GenBank
Match: GAX96126.1 (iojap-like ribosome-associated protein [Pythium insidiosum]) HSP 1 Score: 92.4 bits (228), Expect = 4.100e-15 Identity = 55/133 (41.35%), Postives = 77/133 (57.89%), Query Frame = 0 Query: 295 IPVVLRTLLTPAEVVQSLTELGGGGVTSVDIRGKGNFDAEAMIFASGRSGGHLRRMADALVGALKARGVEEERAPGVTGAEGYECDDWMIVDGGNVIVHLMEPSQRKALELEQFWGGAAEGMEEAKGGSVGEV 428 IP + +T LT EV+ +L V +VD+ GK + A+ M+F +GRS H+RRMAD L+ ++KAR +E+E V EG +CDDWMI D N++VH M R+ L LE W E ME K G++ Sbjct: 117 IPPIPQTYLTLDEVLAALEREKAIDVYTVDLAGKSSL-ADFMVFTTGRSQAHMRRMADMLIQSMKARNIEDEFDYSV---EGRDCDDWMIADCNNIVVHFMREDTRRILNLEHHW----EHMENDKHKVYGDM 241
BLAST of NO08G03820 vs. NCBI_GenBank
Match: ETI44970.1 (iojap-like ribosome-associated protein [Phytophthora parasitica P1569] >ETL38319.1 iojap-like ribosome-associated protein [Phytophthora parasitica] >ETL91433.1 iojap-like ribosome-associated protein [Phytophthora parasitica] >ETM44752.1 iojap-like ribosome-associated protein [Phytophthora parasitica] >ETP14724.1 iojap-like ribosome-associated protein [Phytophthora parasitica CJ01A1] >KUF87287.1 hypothetical protein AM588_10001548 [Phytophthora nicotianae]) HSP 1 Score: 92.0 bits (227), Expect = 5.400e-15 Identity = 57/143 (39.86%), Postives = 79/143 (55.24%), Query Frame = 0 Query: 295 IPVVLRTLLTPAEVVQSLTELGGGGVTSVDIRGKGNFDAEAMIFASGRSGGHLRRMADALVGALKARGVEEERAPGVTGAEGYECDDWMIVDGGNVIVHLMEPSQRKALELEQFWGGAAEGMEEAKGGSVGEVVMPVVAGTSE 438 IP + +T LT EV Q+L V +VD+ GK + A+ M+FA+GRS H+RRMAD L+ ++KAR + ++ V EG +CDDWMI D N++VHLM R+ L LE W + G + M GTSE Sbjct: 153 IPAIPQTYLTIDEVQQALEREKAIDVYTVDLAGKSSL-ADFMVFATGRSQAHMRRMADLLIKSMKARELVDDFDYAV---EGRDCDDWMIADCNNIVVHLMRADTRRILNLEDHWENMVDDKHSVYGDMSEDEYMDKF-GTSE 290
BLAST of NO08G03820 vs. NCBI_GenBank
Match: XP_008893492.1 (iojap-like ribosome-associated protein [Phytophthora parasitica INRA-310] >ETK84896.1 iojap-like ribosome-associated protein [Phytophthora parasitica] >ETN21733.1 iojap-like ribosome-associated protein [Phytophthora parasitica INRA-310] >ETP42792.1 iojap-like ribosome-associated protein [Phytophthora parasitica P10297]) HSP 1 Score: 92.0 bits (227), Expect = 5.400e-15 Identity = 57/143 (39.86%), Postives = 79/143 (55.24%), Query Frame = 0 Query: 295 IPVVLRTLLTPAEVVQSLTELGGGGVTSVDIRGKGNFDAEAMIFASGRSGGHLRRMADALVGALKARGVEEERAPGVTGAEGYECDDWMIVDGGNVIVHLMEPSQRKALELEQFWGGAAEGMEEAKGGSVGEVVMPVVAGTSE 438 IP + +T LT EV Q+L V +VD+ GK + A+ M+FA+GRS H+RRMAD L+ ++KAR + ++ V EG +CDDWMI D N++VHLM R+ L LE W + G + M GTSE Sbjct: 153 IPAIPQTYLTIDEVQQALEREKAIDVYTVDLAGKSSL-ADFMVFATGRSQAHMRRMADLLIKSMKARELVDDFDYAV---EGRDCDDWMIADCNNIVVHLMRADTRRILNLEDHWENMVDDKHSVYGDMSEDEYMDKF-GTSE 290
BLAST of NO08G03820 vs. NCBI_GenBank
Match: ETO73543.1 (iojap-like ribosome-associated protein [Phytophthora parasitica P1976]) HSP 1 Score: 92.0 bits (227), Expect = 5.400e-15 Identity = 57/143 (39.86%), Postives = 79/143 (55.24%), Query Frame = 0 Query: 295 IPVVLRTLLTPAEVVQSLTELGGGGVTSVDIRGKGNFDAEAMIFASGRSGGHLRRMADALVGALKARGVEEERAPGVTGAEGYECDDWMIVDGGNVIVHLMEPSQRKALELEQFWGGAAEGMEEAKGGSVGEVVMPVVAGTSE 438 IP + +T LT EV Q+L V +VD+ GK + A+ M+FA+GRS H+RRMAD L+ ++KAR + ++ V EG +CDDWMI D N++VHLM R+ L LE W + G + M GTSE Sbjct: 153 IPAIPQTYLTIDEVQQALEREKAIDVYTVDLAGKSSL-ADFMVFATGRSQAHMRRMADLLIKSMKARELVDDFDYAV---EGRDCDDWMIADCNNIVVHLMRADTRRILNLEDHWENMVDDKHSVYGDMSEDEYMDKF-GTSE 290
BLAST of NO08G03820 vs. NCBI_GenBank
Match: KUF85182.1 (Ribosomal silencing factor RsfS [Phytophthora nicotianae]) HSP 1 Score: 92.0 bits (227), Expect = 5.400e-15 Identity = 57/143 (39.86%), Postives = 79/143 (55.24%), Query Frame = 0 Query: 295 IPVVLRTLLTPAEVVQSLTELGGGGVTSVDIRGKGNFDAEAMIFASGRSGGHLRRMADALVGALKARGVEEERAPGVTGAEGYECDDWMIVDGGNVIVHLMEPSQRKALELEQFWGGAAEGMEEAKGGSVGEVVMPVVAGTSE 438 IP + +T LT EV Q+L V +VD+ GK + A+ M+FA+GRS H+RRMAD L+ ++KAR + ++ V EG +CDDWMI D N++VHLM R+ L LE W + G + M GTSE Sbjct: 153 IPAIPQTYLTIDEVQQALEREKAIDVYTVDLAGKSSL-ADFMVFATGRSQAHMRRMADLLIKSMKARELVDDFDYAV---EGRDCDDWMIADCNNIVVHLMRADTRRILNLEDHWENMVDDKHSVYGDMSEDEYMDKF-GTSE 290
BLAST of NO08G03820 vs. NCBI_GenBank
Match: KUG01419.1 (Ribosomal silencing factor RsfS [Phytophthora nicotianae]) HSP 1 Score: 92.0 bits (227), Expect = 5.400e-15 Identity = 57/143 (39.86%), Postives = 79/143 (55.24%), Query Frame = 0 Query: 295 IPVVLRTLLTPAEVVQSLTELGGGGVTSVDIRGKGNFDAEAMIFASGRSGGHLRRMADALVGALKARGVEEERAPGVTGAEGYECDDWMIVDGGNVIVHLMEPSQRKALELEQFWGGAAEGMEEAKGGSVGEVVMPVVAGTSE 438 IP + +T LT EV Q+L V +VD+ GK + A+ M+FA+GRS H+RRMAD L+ ++KAR + ++ V EG +CDDWMI D N++VHLM R+ L LE W + G + M GTSE Sbjct: 16 IPAIPQTYLTIDEVQQALEREKAIDVYTVDLAGKSSL-ADFMVFATGRSQAHMRRMADLLIKSMKARELVDDFDYAV---EGRDCDDWMIADCNNIVVHLMRADTRRILNLEDHWENMVDDKHSVYGDMSEDEYMDKF-GTSE 153
BLAST of NO08G03820 vs. NCBI_GenBank
Match: XP_002903347.1 (conserved hypothetical protein [Phytophthora infestans T30-4] >EEY55771.1 conserved hypothetical protein [Phytophthora infestans T30-4]) HSP 1 Score: 90.1 bits (222), Expect = 2.000e-14 Identity = 55/133 (41.35%), Postives = 77/133 (57.89%), Query Frame = 0 Query: 295 IPVVLRTLLTPAEVVQSLTELGGGGVTSVDIRGKGNFDAEAMIFASGRSGGHLRRMADALVGALKARGVEEERAPGVTGAEGYECDDWMIVDGGNVIVHLMEPSQRKALELEQFWGGAAEGMEEAKGGSVGEV 428 IP + + LT EV Q+L V +VD+ GK + A+ M+FA+GRS H+RRMAD L+ ++KAR + ++ V EG +CDDWMI D N++VHLM R+ L LE W E M + K GE+ Sbjct: 152 IPAISQIYLTIDEVQQALEREKAIDVYTVDLAGKTSL-ADFMVFATGRSQAHMRRMADLLIKSMKAREIVDDFDYAV---EGRDCDDWMIADCNNIVVHLMRADTRRILNLEDHW----EKMVDDKHSVYGEM 276
BLAST of NO08G03820 vs. NCBI_GenBank
Match: OWZ12087.1 (Iojap-like ribosome-associated protein [Phytophthora megakarya]) HSP 1 Score: 88.6 bits (218), Expect = 5.900e-14 Identity = 55/143 (38.46%), Postives = 78/143 (54.55%), Query Frame = 0 Query: 295 IPVVLRTLLTPAEVVQSLTELGGGGVTSVDIRGKGNFDAEAMIFASGRSGGHLRRMADALVGALKARGVEEERAPGVTGAEGYECDDWMIVDGGNVIVHLMEPSQRKALELEQFWGGAAEGMEEAKGGSVGEVVMPVVAGTSE 438 IP + ++ LT EV +L V +VD+ GK + A+ M+FA+GRS H+RRMAD L+ ++KAR + ++ V EG +CDDWMI D N++VHLM R+ L LE W + G + M GTSE Sbjct: 153 IPPIPQSYLTIEEVKDALEREKAIDVYTVDLAGKTSL-ADFMVFATGRSQAHMRRMADLLIKSMKAREIVDDFDYAV---EGRDCDDWMIADCNNIVVHLMRADTRRILALEDHWENMVDDKHSVYGDMTEDEYMDKY-GTSE 290 The following BLAST results are available for this feature:
BLAST of NO08G03820 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO08G03820 ID=NO08G03820|Name=NO08G03820|organism=Nannochloropsis oceanica|type=gene|length=2765bpback to top protein sequence of NO08G03820.1 >NO08G03820.1-protein ID=NO08G03820.1-protein|Name=NO08G03820.1|organism=Nannochloropsis oceanica|type=polypeptide|length=491bpback to top Synonyms
Publications
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