NO08G03790, NO08G03790 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO08G03790 vs. NCBI_GenBank
Match: EWM26846.1 (grip and coiled-coil domain-containing protein [Nannochloropsis gaditana]) HSP 1 Score: 218.4 bits (555), Expect = 9.600e-53 Identity = 288/918 (31.37%), Postives = 390/918 (42.48%), Query Frame = 0 Query: 74 LTSAPPRNKRLGTLSSFGKEIGSF-XXXXXXXXXXXXXXXXXXXXXXEKSPLAIEPDISREDLMHLCLKLNKCLRNLENNFTEQKKAQNEAAAQRDELLGFVVTEVL-RKGVPSEGLQISLPDLQREWAEREEERNMTLQSMQQQHRDYVQA-KEQEIRLLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVRQLVLEIEESRAAQVAKEKETESLRKELQEHIKALEEEKDVVISLQNQLATIKTQHETXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLQQDLDLKTQRIATLEEQLGASSVLLHQKELTLEELRLSLSHHQQQHHELASSLQTSQYALQ-----------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKNGIVQRLKEDLDKAEQLRANDATQMAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIWAQKEAFSLQHQQQREAHAAELTTLRRDNQKKTSLAQTLLQEKEAQLQQLTHQLTTLQADLSSGAHADSAIMILASKQSLRDTKQQAEVESFKISLKRLQEALAQKDLECAQLAAAHASLTRASVGRRQVQQREGCNLEYLKNVVVDYLSFPPGAVSEKESLERVLATLLVFTPQDQRKIKEGRERVRGGGLASWLLVPPGRPINYIAPMGRPRVAGXXXXXXXXXXXXXMVLT-------------GGQXXXXXXXXXXXXXXXXXXXXXXXXXREGREAGGRTISTCLDEGEGQGGIDASVGERSSLGS------------SSGSVSLSSSDFESLSGHATKGGXXXXXXXXGREGGVESPT-----QPRHVGLFLGG------------EEGGEGRR 936 LT++P RNK + LSSF K I + I PDIS EDLM C KL + ++ +E E K+A +RDE++ F+ +VL R+ VP G Q SLP L+REWA++EEER++TLQ+MQQQHR+YV A K L V+ E+E+++ A E+ D L+ ++ ++ H D LE++L ASS++L +K+ ++ L ++S Q + L SSL+ +Q + K G++ R++ DL+K EQ A QMA XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX AQ++ ++LA+ ++ +K+ QL + ++ L+ +++SG++ D IM LA+ QS RD+ +AE+ES K+SLK+LQEALA KDLE +L A A+L + V R+ QQREGCNLEYLKNVVVDYLSFPPGA+SEK SLERVLATLL F+PQD++KI EGRE +GGG+ WLL P RP+ +IAP G V+ G + +G+E G+ + + + G A VG GS S GS+SLS SDF+SLS HA GREGG + +PR+ GG EEGG +R Sbjct: 88 LTTSPLRNKGIEALSSFSKGILKISQHHQYASSLGKTSTSTAPDSPCQDEQRVIGPDISMEDLMLACTKLKRRVKVMETQTRELKEANGRTEVERDEMIDFLYRDVLQREDVPPHGTQASLPALRREWAQQEEERHLTLQAMQQQHREYVLANKAAPASTLAIALPSIPKPQEEHDESSLATVREQNVDDNELCRVQN---ELEDAKRALAQTEEXXXXXXXXXXXXXXXXXXXXDTARKLKLEVGKMQESHAKEVTRLRRQIRPQGEDGAPQAGPETPASEAGREGKTGAERERAEKTASFPR---------------------DRAMDEADELEKELAASSLILQEKDSAIDALHRAMSQDQSERLTLESSLRAAQSKVDSLTQEIASISGLLRGAEQEKENLRQRDAEQRAELDRGCQQLAEKTGVLLRVRSDLEKTEQSCALKTAQMAQLETGVQEMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEILRKEKEAWESGAQAQRDXXXXXXXXXXXXXXXXXXXXXXXXXXXSALAREIIADKDRQLGECVQKIMALEEEIASGSYTDRKIMELATVQSQRDSHHRAELESCKVSLKKLQEALATKDLEVGRLTALQATLNQERVALRRAQQREGCNLEYLKNVVVDYLSFPPGALSEKASLERVLATLLAFSPQDRKKIAEGREGGQGGGI-GWLLTAPRRPVKHIAP-GAHAVSVSLVDSRNHDHGVEAAKNKAGVHVGGRGGPLGDKGNGQSKLPSPLRVGRVEVVGGGKSGSDGKEECGKRDGGTMTKPQSAAGAVARVGFEQGFGSLSGSGGGKSVEGSVGSLSLSQSDFQSLSEHA----------DTGREGGRGRSSASFLGEPRYSTSSAGGLTTRSSGTESEDEEGGRPKR 969
BLAST of NO08G03790 vs. NCBI_GenBank
Match: XP_005854407.1 (grip and coiled-coil domain-containing protein 1, partial [Nannochloropsis gaditana CCMP526] >EKU21954.1 grip and coiled-coil domain-containing protein 1, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 161.0 bits (406), Expect = 1.800e-35 Identity = 85/129 (65.89%), Postives = 103/129 (79.84%), Query Frame = 0 Query: 639 SSGAHADSAIMILASKQSLRDTKQQAEVESFKISLKRLQEALAQKDLECAQLAAAHASLTRASVGRRQVQQREGCNLEYLKNVVVDYLSFPPGAVSEKESLERVLATLLVFTPQDQRKIKEGRERVRGG 768 +SG++ D IM LA+ QS RD+ +AE+ES K+SLK+LQEALA KDLE +L A A+L + V R+ QQREGCNLEYLKNVVVDYLSFPPGA+SEK SLERVLATLL F+PQD++KI EGRE +GG Sbjct: 1 ASGSYTDRKIMELATVQSQRDSHHRAELESCKVSLKKLQEALATKDLEVGRLTALQATLNQERVALRRAQQREGCNLEYLKNVVVDYLSFPPGALSEKASLERVLATLLAFSPQDRKKIAEGREGGQGG 129
BLAST of NO08G03790 vs. NCBI_GenBank
Match: GAX09877.1 (hypothetical protein FisN_11Lh142 [Fistulifera solaris]) HSP 1 Score: 95.5 bits (236), Expect = 9.300e-16 Identity = 64/186 (34.41%), Postives = 110/186 (59.14%), Query Frame = 0 Query: 593 EAHAAELTTLRRDNQKKTSLAQTLLQEKEAQLQQLTHQLTTLQADLSSGAHADSAIMILASKQSLRDTKQQAEVESFKISLKRLQEALAQKDLECAQLAAAHASLTRASVGRRQVQQREGCNLEYLKNVVVDYLSFPPGAVSEKESLERVLATLLVFTPQDQRKIKEGRERVR-GGGLASWLLVPP 778 E+ EL +R+ KK++ AQ L+QEKE + +L + LQ ++ G+ +D I+ LA+KQS R+++Q A++ + +++ + E + ++D + A + + + R+V++RE NL+YLK VV YLS PPG+ SE+ L VLATLL F D + I++G+ ++ G +A L+ P Sbjct: 1299 ESLQKELQIVRQQMAKKSTAAQKLIQEKEQECVELRKANSALQQEVDQGSLSDRRILELAAKQSNRESQQLAQITARDKTIESMMEKVVERDNQLAFMENKVHEVEQQIEELRRVRRREDVNLDYLKTTVVKYLSLPPGS-SERAGLLPVLATLLQFDQNDYKVIEDGKSKISWWGSIAPTLISAP 1483
BLAST of NO08G03790 vs. NCBI_GenBank
Match: GAX14399.1 (hypothetical protein FisN_11Hh142 [Fistulifera solaris]) HSP 1 Score: 95.1 bits (235), Expect = 1.200e-15 Identity = 64/186 (34.41%), Postives = 110/186 (59.14%), Query Frame = 0 Query: 593 EAHAAELTTLRRDNQKKTSLAQTLLQEKEAQLQQLTHQLTTLQADLSSGAHADSAIMILASKQSLRDTKQQAEVESFKISLKRLQEALAQKDLECAQLAAAHASLTRASVGRRQVQQREGCNLEYLKNVVVDYLSFPPGAVSEKESLERVLATLLVFTPQDQRKIKEGRERVR-GGGLASWLLVPP 778 E+ EL +R+ KK++ AQ L+QEKE + +L + LQ ++ G+ +D I+ LA+KQS R+++Q A++ + +++ + E + ++D + A + + + R+V++RE NL+YLK VV YLS PPG+ SE+ L VLATLL F D + I++G+ ++ G +A L+ P Sbjct: 1301 ESLQKELQIVRQQMAKKSTAAQKLIQEKELECVELRKANSALQQEVDQGSLSDRRILELAAKQSNRESQQLAQITARDKTIESMMEKVVERDNQLALMENKVHEVEQQIEELRRVRRREDVNLDYLKTTVVKYLSLPPGS-SERAGLLPVLATLLQFDQNDYKVIEDGKSKMSWWGSIAPTLISAP 1485
BLAST of NO08G03790 vs. NCBI_GenBank
Match: XP_012195222.1 (hypothetical protein SPRG_19023 [Saprolegnia parasitica CBS 223.65] >KDO34173.1 hypothetical protein SPRG_19023 [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 89.0 bits (219), Expect = 8.700e-14 Identity = 66/175 (37.71%), Postives = 100/175 (57.14%), Query Frame = 0 Query: 589 QQQREAHAAELTTLRRDNQKKTSLAQTLLQEKEAQLQQLTHQLTTLQADLSSGAHADSAIMILASKQSLRDTKQQAEVESFKISLKRLQEALAQKDLECAQLAAAHASLTRASVGRRQVQQREGCNLEYLKNVVVDYLSFPPGAVSEKESLERVLATLLVFTPQDQRKIKEGRER 764 Q + AHAAE+ L D + K+ LA+ L+ EKE Q+ L+ QLT L+ D+ SG I LA+ Q+ RD Q++ F+++ L A+A K E L A + + ++REG N+EYLKNVVV ++SF PG+ S++ L VL+TLL F+P D +++ +R Sbjct: 527 QALQAAHAAEVDRLESDARAKSKLARQLVLEKEEQVASLSAQLTQLEHDVKSGDADHRRIFELANVQAQRDAVQRS--RDFEVA--ELTNAVAAKQAEIESLKAQIKVMEDEIAVLVRTERREGVNMEYLKNVVVQFMSFRPGS-SQQAKLIPVLSTLLQFSPHDVDEVRAATKR 696
BLAST of NO08G03790 vs. NCBI_GenBank
Match: EJK69193.1 (hypothetical protein THAOC_09577 [Thalassiosira oceanica]) HSP 1 Score: 87.4 bits (215), Expect = 2.500e-13 Identity = 62/175 (35.43%), Postives = 104/175 (59.43%), Query Frame = 0 Query: 597 AELTTLRRDNQKKTSLAQTLLQEKEAQLQQLTHQLTTLQADLSSGAHADSAIMILASKQSLRDTKQQAEVESFKISLKRLQEALAQKDLECAQLAAAHASLTRASVGRR--QVQQREGCNLEYLKNVVVDYLSFPPGAVSEKESLERVLATLLVFTPQDQRKIKEGRERVRGGGL 770 A++ L+ K++ AQ +++E+E++ +L LQ+++ G+ +D I LA++QS R+T AE+E ++ L + L + D + A A HA L + +V +REG N++YLK++VV YL+ PPG+ SE+ +L VLATLL F D R I+EG+++V G+ Sbjct: 1629 AQVDNLQXXXXXKSAAAQKMIKERESECVELRKTNKYLQSEVDKGSLSDRRIFELAAQQSNRETAAVAEIEIRNKLIQSLTQKLEEGDGDLAN--AEHAVLKKDDQVEELSRVHRREGVNMDYLKSIVVQYLAKPPGS-SERTALLPVLATLLQFDADDYRAIEEGKQKVDWWGM 1800
BLAST of NO08G03790 vs. NCBI_GenBank
Match: XP_008612058.1 (hypothetical protein SDRG_07972 [Saprolegnia diclina VS20] >EQC34652.1 hypothetical protein SDRG_07972 [Saprolegnia diclina VS20]) HSP 1 Score: 86.3 bits (212), Expect = 5.700e-13 Identity = 63/172 (36.63%), Postives = 94/172 (54.65%), Query Frame = 0 Query: 592 REAHAAELTTLRRDNQKKTSLAQTLLQEKEAQLQQLTHQLTTLQADLSSGAHADSAIMILASKQSLRDTKQQAEVESFKISLKRLQEALAQKDLECAQLAAAHASLTRASVGRRQVQQREGCNLEYLKNVVVDYLSFPPGAVSEKESLERVLATLLVFTPQDQRKIKEGRER 764 R +HAAE+ L D + K+ LA+ L+ EKE Q+ L+ QL L+ D+ SG I LA+ Q+ RD Q+ S + L A+A K E L + + ++REG N+EYLKNVVV ++SF PG+ S++ L VL+TLL F+P D +++ +R Sbjct: 545 RTSHAAEVDRLESDARAKSKLARQLVLEKEEQVASLSAQLAQLEHDVKSGDADHRRIFELANVQAQRDAMQR----SRDSEVAELSNAVATKQAEVESLKGQIKIMEDEIAVLVRTERREGVNMEYLKNVVVQFMSFRPGS-SQQAKLIPVLSTLLQFSPHDMDEVRAATKR 711
BLAST of NO08G03790 vs. NCBI_GenBank
Match: XP_009823710.1 (hypothetical protein H257_01942 [Aphanomyces astaci] >ETV86911.1 hypothetical protein H257_01942 [Aphanomyces astaci]) HSP 1 Score: 85.9 bits (211), Expect = 7.400e-13 Identity = 67/199 (33.67%), Postives = 105/199 (52.76%), Query Frame = 0 Query: 592 REAHAAELTTLRRDNQKKTSLAQTLLQEKEAQLQQLTHQLTTLQADLSSGAHADSAIMILASKQSLRDTKQQAEVESFKISLKRLQEALAQKDLECAQLAAAHASLTRASVGRRQVQQREGCNLEYLKNVVVDYLSFPPGAVSEKESLERVLATLLVFTPQDQRKIKEGRERVRGGGLASWLLVPPGRPINYIAPMGRP 791 ++ AAE+ + D + K+ LA+ ++ EKE + LT +L L+ D+ SG I LAS Q+ RD ++ + F L A Q L+ AQL +L + ++REG N+EYLKNVVV ++SF PG+ S++ L VL+ LL FTP+D +++ ++ +SW P R IN +P+ P Sbjct: 1193 QQKFAAEVEKVEADGRAKSKLARQMVLEKEELIASLTTKLAKLEEDVRSGDADHRRIFELASMQANRDATSRSREQEF----AELTAAFEQVRLQNAQLIQDKEALEDDIAHLVRTERREGVNMEYLKNVVVQFMSFRPGS-SQQLKLIPVLSMLLQFTPEDMDEVQASTKQA-SSWTSSWSEKKPVRNINAPSPIVIP 1385
BLAST of NO08G03790 vs. NCBI_GenBank
Match: XP_008865388.1 (hypothetical protein H310_03348 [Aphanomyces invadans] >ETW05611.1 hypothetical protein H310_03348 [Aphanomyces invadans]) HSP 1 Score: 85.9 bits (211), Expect = 7.400e-13 Identity = 70/196 (35.71%), Postives = 99/196 (50.51%), Query Frame = 0 Query: 596 AAELTTLRRDNQKKTSLAQTLLQEKEAQLQQLTHQLTTLQADLSSGAHADSAIMILASKQSLRDTKQQAEVESFKISLKRLQEALAQKDLECAQLAAAHASLTRASVGRRQVQQREGCNLEYLKNVVVDYLSFPPGAVSEKESLERVLATLLVFTPQDQRKIKEGRERVRGGGLASWLLVPPGRPINYIAPMGRPR 792 A EL L D + K+ LA+ ++ EKE + LT +L L+ D+ SG I LAS Q+ RD A S + L + AL Q E QL +L + ++REG N+EYLKNVVV Y+SF PG+ S++ L VL+TLL FTP+D ++ + + SW P R I P+ P+ Sbjct: 1268 AIELEKLEADGRAKSKLARQVVLEKEELIASLTAKLAKLEEDVRSGDADHRRIFELASMQANRD----AAARSREQELAEVMTALEQLRAENVQLTNDKVALEEDIAHLVRTERREGVNMEYLKNVVVQYMSFRPGS-SQQLKLIPVLSTLLQFTPEDMDEVHSSTK--QASSWTSWSEKKPVRNITAPPPIVIPQ 1456
BLAST of NO08G03790 vs. NCBI_GenBank
Match: XP_008865389.1 (hypothetical protein, variant [Aphanomyces invadans] >ETW05612.1 hypothetical protein, variant [Aphanomyces invadans]) HSP 1 Score: 85.9 bits (211), Expect = 7.400e-13 Identity = 70/196 (35.71%), Postives = 99/196 (50.51%), Query Frame = 0 Query: 596 AAELTTLRRDNQKKTSLAQTLLQEKEAQLQQLTHQLTTLQADLSSGAHADSAIMILASKQSLRDTKQQAEVESFKISLKRLQEALAQKDLECAQLAAAHASLTRASVGRRQVQQREGCNLEYLKNVVVDYLSFPPGAVSEKESLERVLATLLVFTPQDQRKIKEGRERVRGGGLASWLLVPPGRPINYIAPMGRPR 792 A EL L D + K+ LA+ ++ EKE + LT +L L+ D+ SG I LAS Q+ RD A S + L + AL Q E QL +L + ++REG N+EYLKNVVV Y+SF PG+ S++ L VL+TLL FTP+D ++ + + SW P R I P+ P+ Sbjct: 1252 AIELEKLEADGRAKSKLARQVVLEKEELIASLTAKLAKLEEDVRSGDADHRRIFELASMQANRD----AAARSREQELAEVMTALEQLRAENVQLTNDKVALEEDIAHLVRTERREGVNMEYLKNVVVQYMSFRPGS-SQQLKLIPVLSTLLQFTPEDMDEVHSSTK--QASSWTSWSEKKPVRNITAPPPIVIPQ 1440 The following BLAST results are available for this feature:
BLAST of NO08G03790 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO08G03790 ID=NO08G03790|Name=NO08G03790|organism=Nannochloropsis oceanica|type=gene|length=3133bpback to top protein sequence of NO08G03790.1 >NO08G03790.1-protein ID=NO08G03790.1-protein|Name=NO08G03790.1|organism=Nannochloropsis oceanica|type=polypeptide|length=947bpback to top Synonyms
Publications
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