NO08G03780, NO08G03780 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO08G03780 vs. NCBI_GenBank
Match: EWM26845.1 (multidrug pheromone mdr abc transporter family [Nannochloropsis gaditana]) HSP 1 Score: 194.5 bits (493), Expect = 2.100e-46 Identity = 96/111 (86.49%), Postives = 104/111 (93.69%), Query Frame = 0 Query: 1 MSIRGVPQLRSLLLRYSDRDGSSRAIRDYIGSRLVAFAQAHEHVKVTTELKRNAHPVVQADYAFGEPKVVCVRTAETAEDVEAVILALRNTTGRKVKPLRKPVVSRLPSIQ 112 MS+RGVPQLRSLLLRYSDRDGSSRA+R+YIGSRLVAFAQAH HVK+TT+LKRN HPVVQADY FG+PKVVCVR A TAE+VE VILALRNTTGRKVKPL KPVVSRLPS+Q Sbjct: 1 MSVRGVPQLRSLLLRYSDRDGSSRAMREYIGSRLVAFAQAHGHVKITTQLKRNVHPVVQADYVFGDPKVVCVRRATTAEEVEKVILALRNTTGRKVKPLNKPVVSRLPSVQ 111
BLAST of NO08G03780 vs. NCBI_GenBank
Match: CBJ25772.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 109.4 bits (272), Expect = 8.800e-21 Identity = 55/129 (42.64%), Postives = 78/129 (60.47%), Query Frame = 0 Query: 1 MSIRGVPQLRSLLLRYSDRDGSSRAIRDYIGSRLVAFAQAHEHVKVTTELKRNAHPVVQADYAFGEPKVVCVRTAETAEDVEAVILALRNTTGRKVKPLRKPVVSRLPSIQGMWDPRMPLHKEKVTLEH 130 M+ RGV QLR L L+Y D GSS+ R++I R+V FA +V TEL+ HP + DY GE K + ++ E ++ ++ LRN++G KV+ +KPV SR PSIQG+WD PLH + +EH Sbjct: 1 MATRGVFQLRKLTLKYCDHSGSSKGAREFIRHRIVEFANNTPAAEVVTELRPGKHPYIMGDYVTGEVKTIGIKNIAPGEIMDYAMM-LRNSSGHKVRKFKKPVESRYPSIQGVWDIDAPLHTTDIHVEH 128
BLAST of NO08G03780 vs. NCBI_GenBank
Match: XP_009036903.1 (hypothetical protein AURANDRAFT_26234 [Aureococcus anophagefferens] >EGB08168.1 hypothetical protein AURANDRAFT_26234 [Aureococcus anophagefferens]) HSP 1 Score: 95.1 bits (235), Expect = 1.700e-16 Identity = 54/112 (48.21%), Postives = 69/112 (61.61%), Query Frame = 0 Query: 1 MSIRGVPQLRSLLLRYSDRDGSSRAIRDYIGSRLVAFAQAHEHVKVTTELKRNAHPVVQADYAFGEPKVVCVRTAETAEDVEAVILALRNTTGRKVKPLRKPVVSRLPSIQG 113 MS RGV QL+SL++RY GSSR R+++ + AFA+A+ V EL R HPVV+ Y +GE KV R AE + V LRNT+GRK+K KPV+S PSIQG Sbjct: 1 MSHRGVLQLKSLVVRYCPHGGSSRGAREFVRDKFAAFAEANASVDCRAELGRGKHPVVKGAYVWGEDKVADGRNLSAAE-ILKVAEGLRNTSGRKMKRFDKPVLSMTPSIQG 111
BLAST of NO08G03780 vs. NCBI_GenBank
Match: KFH63538.1 (hypothetical protein MVEG_10947 [Mortierella verticillata NRRL 6337]) HSP 1 Score: 93.6 bits (231), Expect = 5.000e-16 Identity = 44/111 (39.64%), Postives = 68/111 (61.26%), Query Frame = 0 Query: 6 VPQLRSLLLRYSDRDGSSRAIRDYIGSRLVAFAQAHEHVKVTTELKRNAHPVVQADYAFGEPKVVCVRTAETAEDVEAVILALRNTTGRKVKPLRKPVVSRLPSIQGMWDP 117 VPQ R L+ Y +R GSSR + +Y+ L+ FA+ H HV+V + + HPV++ Y G+ KVVCVR E D+ + L+ ++G K+K +KPV+S S++G+W P Sbjct: 18 VPQCRRLVFHYCERSGSSRGMIEYLKKDLIQFAKEHPHVEVIVTPRPSKHPVIRGLYLNGKDKVVCVRNMEPT-DIAGKVALLKESSGNKMKTFKKPVISTTESVRGIWSP 127
BLAST of NO08G03780 vs. NCBI_GenBank
Match: XP_002180261.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >EEC48452.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 92.8 bits (229), Expect = 8.600e-16 Identity = 49/122 (40.16%), Postives = 76/122 (62.30%), Query Frame = 0 Query: 1 MSIRGVPQLRSLLLRYSDRDGSSRAIRDYIGS-RLVAFAQAHEHVKVTTELKRNAHPVVQADY-AFGEPKVVCVRTAETAEDVEAVILALRNTTGRKVKPLRKPVVSRLPSIQGMWDPRMPL 121 M+ RGV QL L L Y + GSSRA+R Y+G+ +LV++A AH HV++ +++ HP V A+Y + + VR + +DV+ V+ L N +GRK+ + PV++ PSIQG+W P + L Sbjct: 1 MATRGVFQLTKLRLHYCEVGGSSRAMRTYLGNGKLVSWATAHPHVEIEVQVRNGHHPFVLAEYRSMAATHQISVRNVDRWQDVQDVLYLLSNRSGRKITKITTPVLTDTPSIQGVWTPFLTL 122
BLAST of NO08G03780 vs. NCBI_GenBank
Match: XP_021877766.1 (thioredoxin-like protein [Lobosporangium transversale] >ORZ06970.1 thioredoxin-like protein [Lobosporangium transversale]) HSP 1 Score: 91.7 bits (226), Expect = 1.900e-15 Identity = 42/111 (37.84%), Postives = 68/111 (61.26%), Query Frame = 0 Query: 6 VPQLRSLLLRYSDRDGSSRAIRDYIGSRLVAFAQAHEHVKVTTELKRNAHPVVQADYAFGEPKVVCVRTAETAEDVEAVILALRNTTGRKVKPLRKPVVSRLPSIQGMWDP 117 +PQ R L+ Y +R GSSR + +Y+ L+ FA+ H HV+V + + HPV++ Y G+ KVVCVR E +D+ + L+ + G ++K +KPV+S S++G+W P Sbjct: 18 IPQCRRLVFHYCERSGSSRGMIEYVKKDLIEFAKEHPHVEVIVTPRPSKHPVIRGLYLNGKDKVVCVRNME-PKDIAGKVQLLKESAGNRMKVFKKPVISTTESVRGIWSP 127
BLAST of NO08G03780 vs. NCBI_GenBank
Match: OAQ22455.1 (hypothetical protein K457DRAFT_143433 [Mortierella elongata AG-77]) HSP 1 Score: 91.3 bits (225), Expect = 2.500e-15 Identity = 42/111 (37.84%), Postives = 67/111 (60.36%), Query Frame = 0 Query: 6 VPQLRSLLLRYSDRDGSSRAIRDYIGSRLVAFAQAHEHVKVTTELKRNAHPVVQADYAFGEPKVVCVRTAETAEDVEAVILALRNTTGRKVKPLRKPVVSRLPSIQGMWDP 117 +PQ R L+ Y +R GSSR + +Y+ L+ FA+ H HV+V + + HPV++ Y G+ KVVCVR E D+ + L+ + G ++K +KPV+S S++G+W P Sbjct: 17 IPQCRRLVFHYCERSGSSRGMIEYLKKDLIQFAKEHPHVEVIVTPRPSKHPVIRGLYLNGKDKVVCVRNMEPT-DIAGKVALLKESAGNRMKVFKKPVISTTESVRGIWSP 126
BLAST of NO08G03780 vs. NCBI_GenBank
Match: XP_004510556.1 (PREDICTED: 54S ribosomal protein L51, mitochondrial-like [Cicer arietinum]) HSP 1 Score: 90.1 bits (222), Expect = 5.600e-15 Identity = 51/114 (44.74%), Postives = 72/114 (63.16%), Query Frame = 0 Query: 1 MSIRGVPQLRSLLLRYSDRDGSSRAIRDYIGSRLVAFAQAHEHVKVTTELKRNAHPVVQADYAFGEPKVVCVRTAETAEDVEAVILALRNTTGRKVKPLRKPVVSRLPSIQGMW 115 M++RGV QL+ L++ YSD GSSR IR ++ S L AF +++ ++V TE+ R HP ++A Y +VVCVR + AE+V LRN GRKV LR V++ PS+QG W Sbjct: 1 MALRGVWQLQKLIVSYSDWGGSSRGIRAFMESHLPAFKESNPQLEVVTEMIRGQHPHLKAFYKNHNERVVCVRNMD-AEEVLLHATRLRNALGRKVIKLRTRHVTKHPSVQGTW 113
BLAST of NO08G03780 vs. NCBI_GenBank
Match: GAX17464.1 (hypothetical protein FisN_5Hu114 [Fistulifera solaris]) HSP 1 Score: 90.1 bits (222), Expect = 5.600e-15 Identity = 47/125 (37.60%), Postives = 74/125 (59.20%), Query Frame = 0 Query: 1 MSIRGVPQLRSLLLRYSDRDGSSRAIRDYIGS-RLVAFAQAHEHVKVTTELKRNAHPVVQADYAFGEPK-VVCVRTAETAEDVEAVILALRNTTGRKVKPLRKPVVSRLPSIQGMWDPRMPLHKE 124 M+ RGV QL L L Y + GSS +R+YIG+ LVA+A+ H++V + ++ HP V+A+Y + +C++ + VE V LRN +GRK+ + +P+ + PSIQG+W P + L E Sbjct: 1 MATRGVFQLTKLRLNYCEFSGSSATVREYIGNGPLVAWARKHDNVAIEVVVRNGKHPYVEAEYQHNTTRHQICLKNKPDTKAVEKVFDTLRNRSGRKISKITQPIKTSTPSIQGVWTPFLNLQNE 125
BLAST of NO08G03780 vs. NCBI_GenBank
Match: XP_008616528.1 (hypothetical protein SDRG_12243 [Saprolegnia diclina VS20] >XP_012198849.1 hypothetical protein SPRG_04539 [Saprolegnia parasitica CBS 223.65] >EQC29961.1 hypothetical protein SDRG_12243 [Saprolegnia diclina VS20] >KDO30638.1 hypothetical protein SPRG_04539 [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 89.4 bits (220), Expect = 9.500e-15 Identity = 55/129 (42.64%), Postives = 72/129 (55.81%), Query Frame = 0 Query: 1 MSIRGVPQLRSLLLRYSDRDGSSRAIRDYI-GSRLVAFAQAHEHVKVTTELKRNAHPVVQADYAFGEPKVVCVRTAETAEDVEAVILALRNTTGRKVKPLRKPVVSRLPSIQGMWDPRMPLHKEKVTLE 129 M+ RGV QL L +RY GSSR +RD + R +AF + V TELK N HPV+ DY E KV V+ E V +I LR+T+GRK+ + PV+S+ P+IQG+W P EK T E Sbjct: 1 MATRGVWQLEKLTIRYCQYGGSSRYVRDLLKDQRFLAFVAENPQVTFETELKGNRHPVLIGDYITKEQKVCDVKNQE-IPFVMQMIQRLRDTSGRKMTKVNAPVLSKRPTIQGIWQPDTAELFEKTTFE 128 The following BLAST results are available for this feature:
BLAST of NO08G03780 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO08G03780 ID=NO08G03780|Name=NO08G03780|organism=Nannochloropsis oceanica|type=gene|length=1321bpback to top protein sequence of NO08G03780.1 >NO08G03780.1-protein ID=NO08G03780.1-protein|Name=NO08G03780.1|organism=Nannochloropsis oceanica|type=polypeptide|length=134bpback to top Synonyms
Publications
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