NO08G03690, NO08G03690 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
Homology
BLAST of NO08G03690 vs. NCBI_GenBank
Match: XP_005855052.1 (hypothetical protein NGA_2012310, partial [Nannochloropsis gaditana CCMP526] >EKU21305.1 hypothetical protein NGA_2012310, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 315.1 bits (806), Expect = 3.400e-82 Identity = 193/349 (55.30%), Postives = 232/349 (66.48%), Query Frame = 0 Query: 9 DPNAYHVFPGDEVGGGLGKDKDVNLEPSAAEREKEAYLHPCCQKELESTRARTKLMSKLRAVDITRQAMDRRKGVVG--LSEEQHQHEHGAGCCALMADYPALARLRVTRDGGVGTRQDYDDMEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRELEAGDDGGFLEIRRAELMRQAQEAAEIQYLGIGLHTELPPNRVLDLVYLRCCHLVVHCYDPYGETSAVLDLQLEGLAKMYPGTRFVRTPFG---------GGEG---LRQALRVPAPGSGSGYTKSVLLSLRDGSLVDSCYDYGRRFGEGREGRREGGEVYLEAVEQWLRHCQVLERERMDVERARKM 344 DPNA+H PGD K + E S ER KE YLHPCCQKELE+TRARTKLM+KL A DITR AM+RR+ V G + +QHQH HG GCC+L DYPAL+ LR + GG ++ XXXXXXXXXXXXXXXX RELE GDDGGF EIRRAE++R+A E AE+Q LG+GLHT + P R L +V C LV+HCYDPY SA LDL+LE LA YPGTRF+RT FG GG+G LR++LRVPAP Y KSV+L++++G LVDSCYD+GRRFG+ +EGR VY EAVEQWL+HC+VLER + V+ AR+M Sbjct: 10 DPNAFHQLPGDYASE--NKHDENGTEVSVVERVKEEYLHPCCQKELEATRARTKLMTKLTAADITRHAMERRRNVFGPEQANDQHQHVHGTGCCSLTVDYPALSDLREKQGGGSRAM----EVGMPVGSGDGDEQALLRQAXXXXXXXXXXXXXXXXWLRELEDGDDGGFQEIRRAEMVRRALEQAELQALGVGLHTYVAPARALKIVQRASCPLVMHCYDPYSPISAALDLELEVLAARYPGTRFLRTAFGANGGTRDGRGGQGSKVLRESLRVPAPAPTGEYRKSVVLAVKEGRLVDSCYDFGRRFGDVKEGR-----VYGEAVEQWLQHCRVLERASVCVDDARRM 347
BLAST of NO08G03690 vs. NCBI_GenBank
Match: EWM26796.1 (hypothetical protein Naga_100018g60 [Nannochloropsis gaditana]) HSP 1 Score: 308.1 bits (788), Expect = 4.100e-80 Identity = 187/338 (55.33%), Postives = 225/338 (66.57%), Query Frame = 0 Query: 9 DPNAYHVFPGDEVGGGLGKDKDVNLEPSAAEREKEAYLHPCCQKELESTRARTKLMSKLRAVDITRQAMDRRKGVV--GLSEEQHQHEHGAGCCALMADYPALARLRVTRDGGVGTRQDYDDMEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRELEAGDDGGFLEIRRAELMRQAQEAAEIQYLGIGLHTELPPNRVLDLVYLRCCHLVVHCYDPYGETSAVLDLQLEGLAKMYPGTRFVRTPFG---------GGEG---LRQALRVPAPGSGSGYTKSVLLSLRDGSLVDSCYDYGRRFGEGREGRREGGEVYLEAVEQWLRHCQVLER 333 DPNA+H PGD K + E S ER KE YLHPCCQKELE+TRARTKLM+KL A DITR AM+RR+ V G + +QHQH HG GCC+L DYPAL+ LR + GG ++ XXXXXXXXXXXXXXXX +ELE GDDGGF E+RRAE++R+A E AE+Q LG+GLHT + P R L +V C LV+HCYDPY SA LDL+LE LA YPGTRF+RT FG GG+G LR++LRVPAP Y KSV+L++++G LVDSCYD+GRRFG+ +EGR VY EAVEQWL+HC+VLER Sbjct: 29 DPNAFHQLPGDYASE--NKHDENGTEVSVVERVKEEYLHPCCQKELEATRARTKLMTKLTAADITRHAMERRRNVFGPGQANDQHQHVHGTGCCSLTVDYPALSDLRERQGGGSRAM----EVGMPVGSGDGDEQALLRQAXXXXXXXXXXXXXXXXWLQELEDGDDGGFQEVRRAEMVRRALEQAELQALGVGLHTYVAPARALKIVQRASCPLVMHCYDPYSPISAALDLELEVLAARYPGTRFLRTAFGANGGTRDGRGGQGSKVLRESLRVPAPAPTGEYRKSVVLAVKEGRLVDSCYDFGRRFGDVKEGR-----VYGEAVEQWLQHCRVLER 355
BLAST of NO08G03690 vs. NCBI_GenBank
Match: EJK71258.1 (hypothetical protein THAOC_07321, partial [Thalassiosira oceanica]) HSP 1 Score: 97.1 bits (240), Expect = 1.400e-16 Identity = 119/423 (28.13%), Postives = 166/423 (39.24%), Query Frame = 0 Query: 17 PGDEVGGGLGKDKDVNLEPSAAEREKEAYLHPCCQKELESTRARTKLMSKLRAVDITRQAMDRRKGVVGLSEEQHQH--------EHGAGCCALM------ADYPALARLRVTRDGGVGTRQDYDDMEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRELEAGDDGGFLEIRRAELMRQAQEAAEIQYLGIGLHTELPPNRVLDLV---------YLRCCHLVVHCYDPYGETSAVLDLQLEGLAKMYPGTRFVRTPFGGGEGLRQALRVPAPGSGSGYTKSVLLSLRDGSLVDSCYDYG-RRFGEGREGRREGGEVYLEAVEQWLRHCQVLERERMDVE---RARKMRLLLKAQMGRKGGKGGRTGVGMRMAITAGGQERDEEVEDGGEDEDEAEFYECGLEGCYKPFIHSHVGME 413 P ++ GLG DV P+ A + + L CCQ+E+ES R + + + LR D +A D R+ LS ++ E G GC +Y LA R R D + E G + RRAEL A+ Y G G+H +L P R L V R +H +D Y SA LDL LE LA +PGT+FVR+ G L A +P VLL+LR+G +V + G R F GR EV AVE WL VL + ++ R R +L + + KG G GM + G E++ ++E E E+Y+CG++GC K F H HVG++ Sbjct: 59 PNKQMFEGLGAPVDV--APTQASEDFDPTLDSCCQREIESNRKQNAVEAALRVHDRVAKAEDSRRHQQTLSSNWREYNPANLVRGEFGDGCRCCYDPNEDGGEYELLAEARRERTNARPDEPSELDGDGESKDPVGSASDSDSSDDEFDYLLD-----------EDLPGAHSEYDNSRRAELESLAKRVEVANYHGYGVHRQLHPKRALSAVGYGFDQKRETFRPRGAALHLFDAYSPLSASLDLCLEDLASKHPGTKFVRSI--GVSTLTYAEGSDSPADWRRGDLPVLLALREGRVV--AWSSGLRDFECGR------SEVDTRAVELWLESAGVLLTDVPPLDLLCRIRPEEEMLLESIRHERSKGRGFG-GMMSQL---GLEKEMDIE-------EDEYYDCGVKGCCKQFYHEHVGIQ 447
BLAST of NO08G03690 vs. NCBI_GenBank
Match: XP_002291859.1 (predicted protein [Thalassiosira pseudonana CCMP1335] >EED90710.1 predicted protein [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 85.1 bits (209), Expect = 5.700e-13 Identity = 77/248 (31.05%), Postives = 111/248 (44.76%), Query Frame = 0 Query: 180 RRAELMRQAQEAAEIQYLGIGLHTELPPNRVL---------DLVYLRCCHLVVHCYDPYGETSAVLDLQLEGLAKMYPGTRFVRTPFGGGEGLRQALRVPAPGSGSGYTKS---VLLSLRDGSLVDSCYDYGRRFGEGREGRREGGEVYLEAVEQWLRHCQVL--ERERMD-VERARKMRLLLKAQMGRKGGKGGRTGVGMRMAITAGGQERDEEVEDGGEDEDEAEFYECGLEGCYKPFIHSHVGME 413 RRAEL A I++ G G+H ++ P RV D + VVH YD Y S LDL LE +A YPGT+F+R G G+ L G + K ++++L++G +V + G R G + V AVEQWL H VL +MD V R R +L + + +GG A + R E++E+ + Y+CG+ GC K F H HVG++ Sbjct: 185 RRAELESMAHHYEVIRFHGYGVHRQMHPKRVFASAGYGSSTDRDRVTVKGSVVHLYDAYSPLSVSLDLCLEDMASRYPGTKFLR-----GLGVTSLLFAEGDGGDQKWKKGDLPMVVALKEGRVV--AFSSGLRDFYNAGGDQHNERVEPRAVEQWLEHAGVLFDTPPQMDAVCRIRPEEEMLLENLMKLNMQGGLINA------EAPTRSRVEDMEE--------QRYDCGVNGCNKSFFHEHVGVK 411
BLAST of NO08G03690 vs. NCBI_GenBank
Match: XP_002291860.1 (predicted protein [Thalassiosira pseudonana CCMP1335] >EED90711.1 predicted protein [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 83.2 bits (204), Expect = 2.200e-12 Identity = 78/251 (31.08%), Postives = 115/251 (45.82%), Query Frame = 0 Query: 180 RRAELMRQAQEAAEIQYLGIGLHTELPPNRVL----------DLVYLRCCHLVVHCYDPYGETSAVLDLQLEGLAKMYPGTRFVRTPFGGGEGLRQALRVPAPGSGSGYTKS---VLLSLRDGSLVDSCYDYGRRFGEGREGRREGGEVYLEAVEQWLRHCQVLERERMDVERARKMRLLLKAQMGRK-GGKGGRTGVGMRMAITAGGQERDEEVEDGGEDEDEAEFYECGLEGCYKPFIHSHVGME-GIQ 416 RRAEL +A++ ++ G G+H ++ P+RVL D V R VVH YD Y S LDL LEG+A YPGT+FVR G G L V + + +LL+L++G++V F G G+V AVEQWL VL + ++R + ++ GG + GM ++D E+ + + Y CG++GC K F H HVG++ G+Q Sbjct: 154 RRAELEAKAEQYQILRQYGYGVHRQIHPSRVLASAGFGGSCEDGVVPR--GAVVHLYDAYSPLSVSLDLCLEGMASRYPGTKFVR-----GLGKASLLSVNDDDTSHRWKNGHLPMLLALKEGAVVS--------FSSGLRDFNNAGQVESGAVEQWLGIAGVLSDTPPPMGAVCRVRSEEELRLDNVINLHGGLSCDGM------ASTDKDAEIVN--------DRYNCGVDGCNKSFFHQHVGVKNGVQ 375
BLAST of NO08G03690 vs. NCBI_GenBank
Match: CBN74357.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 73.6 bits (179), Expect = 1.700e-9 Identity = 133/382 (34.82%), Postives = 172/382 (45.03%), Query Frame = 0 Query: 47 HPCCQKELESTRARTKLMSKLRAVDITRQAMDRRKGVV--GLSEEQHQHEHGAGCCALMADYPALARLRVTRDGGVGTRQDYDDMEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRELEAGDDGGFLEIRRAELMRQAQEAAEIQYLGIGLHTELPPNRVLDLV--YLRCCHLVVHCYDPYGETSAVLDLQLEGLAKMYPGTRFVRTPFGGGEGLRQALRVPAPGSGSGYTKSVLLSLRDGSLVDSCYDYGRRFGEGREGRREGGEVYLEAVEQWLRHCQVLERERMDVERARKMRLLLKAQMGRKGGKGGRTGVGMRMAITAGGQERDEEVEDG-GEDEDEAEF-YECGLEGCYKPFIHSH-VGMEGIQMPKEFG 422 HPCCQK+ E+ KL S L VD+++ A RK GL+ G DYPAL XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX L+ + ++R + A ++ LG GLH E+P + V + R +V+H YD E A LDL LE A Y GTRFVR G + +R+ + L+ G + + + +FG +G G AVE+WL LE + D A +GG G G +DG G+DE+ AE Y+CGL+GC+K F H H + G +PK FG Sbjct: 38 HPCCQKDSEAKARALKLRSALDKVDLSQIAERARKAAFSSGLAGPPASRSGG-------GDYPALREAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYLLDDPEITRMAQMRVEAMHADATRLQNLRALGFGLHIEVPESGVEEASRGQFRGAGVVLHLYDADSELGASLDLLLEAKAGSYMGTRFVRCRLGPESAVAATMRI---------RRVPALACYKGGVRTAYTEQLSQFGNS-DGVDPG------AVERWLVASGTLEFDPPD------------ANALCEGGGLGVVG------------------DDGDGDDEESAEARYDCGLDGCHKAFKHDHFLAAGGGGLPKGFG 366 The following BLAST results are available for this feature:
BLAST of NO08G03690 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 6
Relationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO08G03690 ID=NO08G03690|Name=NO08G03690|organism=Nannochloropsis oceanica|type=gene|length=1370bpback to top protein sequence of NO08G03690.1 >NO08G03690.1-protein ID=NO08G03690.1-protein|Name=NO08G03690.1|organism=Nannochloropsis oceanica|type=polypeptide|length=427bpback to top Synonyms
Publications
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