NO08G03500, NO08G03500 (gene) Nannochloropsis oceanica

Overview
NameNO08G03500
Unique NameNO08G03500
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length741
Alignment locationchr8:975176..975916 -

Link to JBrowse

Properties
Property NameValue
DescriptionLight-harvesting protein
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr8genomechr8:975176..975916 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
PXD0160542021-01-14
PXD0166992021-01-08
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
PXD0100302020-03-16
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PXD0087212019-04-30
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
GO:0016020membrane
GO:0009579thylakoid
GO:0009507chloroplast
Vocabulary: Biological Process
TermDefinition
GO:0009765photosynthesis, light harvesting
GO:0015979photosynthesis
GO:0006464cellular protein modification process
GO:0006091generation of precursor metabolites and energy
Vocabulary: INTERPRO
TermDefinition
IPR001344Chloro_AB-bd_pln
IPR022796Chloroa_b-bind
Vocabulary: Molecular Function
TermDefinition
GO:0005488binding
Homology
BLAST of NO08G03500 vs. NCBI_GenBank
Match: XP_005854284.1 (light-harvesting protein [Nannochloropsis gaditana CCMP526] >EKU22075.1 light-harvesting protein [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 469.2 bits (1206), Expect = 8.100e-129
Identity = 232/246 (94.31%), Postives = 239/246 (97.15%), Query Frame = 0
Query:    1 MKVIALLSLASVASAFIAPAPLARRASRSVRMAADDDLSVALPFDKRPPNLDGSLAGDVGFDPVGFSNNPPRPWLIGGSGRSLKWYREAEIVHGRVAMLAALGWVFPNIYHLPGNEDVGVDAFANVNPLGALTTVPSAGLWQIAATVTAIELFRINRVIRGDKEAGDLGLGQGEGRWNPFGFNYSEEEYAEKQLQEIKNGRLAMVGILGLLLQASVTGKGIVQQLGGSFDVPEAVSKAGNYFPDGV 247
            M+VIALLSLAS+ASAFIAP PLARRA+ +VRMAADDDLS ALPFDKRPPNLDGSL GDVGFDPVGFSNNPPRPWLIGGSGRSLKWYREAEIVHGRVAMLAALGWVFPNIYHLPGNEDVGVDAFAN+NP GALTTVP+AGLWQIAATV AIELFR+NRVIRGDKEAGDLGLGQGEGRWNPFGFNYSEEEYAEKQLQEIKNGRLAMVGILGLLLQASVTGKGIVQQLGGSFDVPEAVSKAG YFPDGV
Sbjct:    1 MRVIALLSLASMASAFIAPTPLARRATGAVRMAADDDLSTALPFDKRPPNLDGSLPGDVGFDPVGFSNNPPRPWLIGGSGRSLKWYREAEIVHGRVAMLAALGWVFPNIYHLPGNEDVGVDAFANLNPFGALTTVPAAGLWQIAATVGAIELFRVNRVIRGDKEAGDLGLGQGEGRWNPFGFNYSEEEYAEKQLQEIKNGRLAMVGILGLLLQASVTGKGIVQQLGGSFDVPEAVSKAGYYFPDGV 246          
BLAST of NO08G03500 vs. NCBI_GenBank
Match: EWM26813.1 (light-harvesting protein [Nannochloropsis gaditana])

HSP 1 Score: 469.2 bits (1206), Expect = 8.100e-129
Identity = 232/246 (94.31%), Postives = 239/246 (97.15%), Query Frame = 0
Query:    1 MKVIALLSLASVASAFIAPAPLARRASRSVRMAADDDLSVALPFDKRPPNLDGSLAGDVGFDPVGFSNNPPRPWLIGGSGRSLKWYREAEIVHGRVAMLAALGWVFPNIYHLPGNEDVGVDAFANVNPLGALTTVPSAGLWQIAATVTAIELFRINRVIRGDKEAGDLGLGQGEGRWNPFGFNYSEEEYAEKQLQEIKNGRLAMVGILGLLLQASVTGKGIVQQLGGSFDVPEAVSKAGNYFPDGV 247
            M+VIALLSLAS+ASAFIAP PLARRA+ +VRMAADDDLS ALPFDKRPPNLDGSL GDVGFDPVGFSNNPPRPWLIGGSGRSLKWYREAEIVHGRVAMLAALGWVFPNIYHLPGNEDVGVDAFAN+NP GALTTVP+AGLWQIAATV AIELFR+NRVIRGDKEAGDLGLGQGEGRWNPFGFNYSEEEYAEKQLQEIKNGRLAMVGILGLLLQASVTGKGIVQQLGGSFDVPEAVSKAG YFPDGV
Sbjct:   47 MRVIALLSLASMASAFIAPTPLARRATGAVRMAADDDLSTALPFDKRPPNLDGSLPGDVGFDPVGFSNNPPRPWLIGGSGRSLKWYREAEIVHGRVAMLAALGWVFPNIYHLPGNEDVGVDAFANLNPFGALTTVPAAGLWQIAATVGAIELFRVNRVIRGDKEAGDLGLGQGEGRWNPFGFNYSEEEYAEKQLQEIKNGRLAMVGILGLLLQASVTGKGIVQQLGGSFDVPEAVSKAGYYFPDGV 292          
BLAST of NO08G03500 vs. NCBI_GenBank
Match: CEL98288.1 (unnamed protein product [Vitrella brassicaformis CCMP3155])

HSP 1 Score: 315.8 bits (808), Expect = 1.100e-82
Identity = 161/259 (62.16%), Postives = 198/259 (76.45%), Query Frame = 0
Query:    1 MKVIALLSLASV-ASAFI------APAPLARRASR-SVRMAADDDLSVALPFDKRPPNLDGSLAGDVGFDPVGFSNNPPRPWLIGGSGRSLKWYREAEIVHGRVAMLAALGWVFPNIYHLPGNEDVGVDAFANVNPLGALTTVPSAGLWQIAATVTAIELFRINRVIRGDKEAGDLGLGQGEGRWNPFGFNYSEEEYAEKQLQEIKNGRLAMVGILGLLLQASVTGKGIVQQLGGSFDV-PEAVSKAG----NYFPDGV 247
            MKV+A ++L +V A+AF+        +PL +  +R S+    + D S+ALP DKRPPNLDGSL GD GFDPVGFSNN PR WLIGG  RSLKWYREAE+VH RVAMLAALGW+FP I+HLPGN  VGVDAFA  NP  ALTTVP  GLWQIA TV+AIE FR+ RV+RG+KEAGDLGLGQGEGRWNPFGF + E+EY   Q++EIKNGRLAM+ I+G++LQA+VTG+G+++Q+G  F + P     AG     +FP+G+
Sbjct:    2 MKVVAAVALLAVCANAFVPQGVLKRDSPLRKSLTRPSMAEMGESDRSLALPMDKRPPNLDGSLPGDFGFDPVGFSNNLPRTWLIGGDERSLKWYREAELVHSRVAMLAALGWIFPEIWHLPGNAAVGVDAFAETNPWKALTTVPKEGLWQIAGTVSAIEFFRLRRVVRGEKEAGDLGLGQGEGRWNPFGFAFDEDEYYRMQVREIKNGRLAMIAIIGMMLQAAVTGEGLLEQIGEGFGLGPGYRLPAGTGLQKFFPEGL 260          
BLAST of NO08G03500 vs. NCBI_GenBank
Match: CBJ31718.1 (Light harvesting complex protein [Ectocarpus siliculosus])

HSP 1 Score: 266.2 bits (679), Expect = 1.000e-67
Identity = 140/250 (56.00%), Postives = 174/250 (69.60%), Query Frame = 0
Query:    3 VIALLSLASV--ASAFI--APAPLA--RRASRSVRMAADDDLSVALPFDKRPPNLDGSLAGDVGFDPVGFSNNPPRPWLIG---GSGRSLKWYREAEIVHGRVAMLAALGWVFPNIYHLPGNEDVGVDAFANVNPLGALTTVPSAGLWQIAATVTAIELFRINRVIRGDK-EAGDLGLGQGEGRWNPFGFNYSEEEYAEKQLQEIKNGRLAMVGILGLLLQASVTGKGIVQQLGGSFDVPEAVSKAGNYF 243
            V A  SL ++  ASAF+  A  PLA  R A   + MAA  + S+++P D  P  LDG + GDVGFDP GF+NNPP  W+ G   G+   +KWYREAE+ HGRVAMLAA GW+FP IYH PGN  +G D FA +NPL A   +P+AG  QI  T+  +E  R+NR IR D   AGD+GLGQGEGRWNPF FNY+EEEYAEKQLQEIK+GR AM+GI G+  Q  V G+GI+ QLG +F  P++V+KAG +F
Sbjct:    5 VAAATSLCALAPASAFVPGASLPLAGVRSAPSKLAMAATPERSISIPIDPYPEGLDGEMVGDVGFDPAGFANNPP-SWVQGEGTGTAARVKWYREAELAHGRVAMLAAAGWIFPEIYHFPGNTVLGPDRFAEMNPLLAYDNIPNAGGIQIVVTILILETIRLNRSIRSDSGVAGDIGLGQGEGRWNPFNFNYTEEEYAEKQLQEIKHGRTAMIGITGMYFQTLVQGQGILHQLGEAFSTPDSVAKAGYFF 253          
BLAST of NO08G03500 vs. NCBI_GenBank
Match: XP_009034395.1 (hypothetical protein AURANDRAFT_71070 [Aureococcus anophagefferens] >EGB10808.1 hypothetical protein AURANDRAFT_71070 [Aureococcus anophagefferens])

HSP 1 Score: 237.3 bits (604), Expect = 5.200e-59
Identity = 133/253 (52.57%), Postives = 168/253 (66.40%), Query Frame = 0
Query:    1 MKVIALLSLASVASAF------IAPAPLARRASRSVRMAADDDLSVALPFDKRPPNLDGSLAGDVGFDPVGFSNNPPRPWLIGGSG-RSLKWYREAEIVHGRVAMLAALGWVFPNIYHLPGNEDVGVDAFANVNPLGALTTVPSAGLWQIAATVTAIELFRINRVIRGDKEAGDLGLGQGEGRWNPFGFNYSEEEYAEKQLQEIKNGRLAMVGILGLLLQASVTGKGIVQQLGGSFDVPEAVSKAGNYFPDGV 247
            MK+    +L   A+AF       APA  A   SR    +     S+ALP+ +   NLDGSL GDVGFDP+GFS   P  W  G  G  SLK +REAE++HGR+A LA LGW+FP +YH PG +    DAFA +NP  A+  +PSAG  QI A ++++E+ R+NR+       GDLGLGQGEGRWNPFGF+Y+ EEY +KQLQEIK+ RLAM+GI GL  ++S T  G++QQLG SF  PE VSKAG YFP+GV
Sbjct:    1 MKLALSATLIGSAAAFGGFGGKKAPAKAAAPVSRGTGPSIP---SIALPWTE--TNLDGSLVGDVGFDPLGFSKYAPGAWWQGDEGDGSLKIFREAELMHGRIAQLACLGWIFPELYHFPGKD----DAFAKMNPYEAVDAIPSAGWLQILAFMSSLEILRVNRLKDPAYIPGDLGLGQGEGRWNPFGFDYTAEEYYDKQLQEIKHSRLAMLGIAGLAAKSSGTDIGVLQQLGESFSRPEFVSKAGFYFPEGV 244          
BLAST of NO08G03500 vs. NCBI_GenBank
Match: XP_002287377.1 (fucoxanthin chl a/c protein, lhca clade [Thalassiosira pseudonana CCMP1335] >EED94820.1 fucoxanthin chl a/c protein, lhca clade [Thalassiosira pseudonana CCMP1335])

HSP 1 Score: 197.6 bits (501), Expect = 4.600e-47
Identity = 117/257 (45.53%), Postives = 159/257 (61.87%), Query Frame = 0
Query:    1 MKVIALLSLASVASAFIAPAPLARRASRSVRMAADDDLSVALPFDKRPPNLDGSLAGDVGFDPVGFS-------NNPPRPWLIGGSGRSLKWYREAEIVHGRVAMLAALGWVFPNIY-HLPGNEDV-GVDAFANVNPLGALTTVPSAGLWQIAATVTAIELFRINRVIRGDKE--AGDLGLGQGEGRWNPFGFNYSEEEYAEKQLQEIKNGRLAMVGILGLLLQASVTGKGIVQQLGGSFDVPEAVSKAGNYFPDGV 247
            M  +A LSL + ASAF   AP A+   +S  + + ++   ALPF   PP LDGSL GDVGFDP+GFS       NNP   +  G     ++W REAE+ HGR+A LA +G+++P ++   PGNE+  G DA++ VNPL A+  +PS  ++QI   +  +E  R+ R+    K+  +GD+GL    G WNPF  NYS EEYAEKQLQEIK+ RLAM+G  GL  QA  +G+ IV QL  +F  PE  +KAG + P G+
Sbjct:    1 MYKLACLSLIASASAF---AP-AQTGKQSTSLNSWNEAPRALPFGSAPPTLDGSLVGDVGFDPIGFSTAPFASFNNP--IYQEGNFMTDVQWLREAELTHGRIAQLAVVGFIWPALFGTFPGNENFGGADAYSYVNPLEAINHIPSLAIYQIVGGMAWVEYQRVQRIKEQGKDRISGDIGLAY-PGGWNPFNINYSPEEYAEKQLQEIKHCRLAMLGAFGLFFQALNSGEDIVSQLSPAFAAPEYAAKAGYFLPQGI 250          
BLAST of NO08G03500 vs. NCBI_GenBank
Match: OEU09133.1 (fucoxanthin chl a/c protein [Fragilariopsis cylindrus CCMP1102])

HSP 1 Score: 195.3 bits (495), Expect = 2.300e-46
Identity = 119/258 (46.12%), Postives = 160/258 (62.02%), Query Frame = 0
Query:    1 MKVIALLSLASVASAFIAPAPLARR-ASRSVRMAADDDLSVALPFDKR--PPNLDGSLAGDVGFDPVGFSNNPPRPWL-----IGGSGRSLKWYREAEIVHGRVAMLAALGWVFPNIY-HLPGNEDVGVDAFANVNPLGALTTVPSAGLWQIAATVTAIELFRINRVIR--GDKEAGDLGLGQGEG-RWNPFGFNYSEEEYAEKQLQEIKNGRLAMVGILGLLLQASVTGKGIVQQLGGSFDVPEAVSKAGNYFPDGV 247
            MK+   LSL + ASAF   AP A+   S ++   A D  S ALPF +   P  LDGSL GDVGFDPVGFS  P + W       G S   +KW REAE+ HGR+A LA +G+++P++    PGN+  GVDA++  NP+  ++ VP   + QI   ++ IE  R+  + R   D+  GDLGLGQG   R NPF  +YS EE+ EKQ+QEIK+ RLAM+G  GL  QA+ +G  I  Q+GG+   PEAV+KAG + P+G+
Sbjct:    1 MKLTLALSLLASASAF---APAAKTGVSTALGPVAFDRPSAALPFAENGCPATLDGSLPGDVGFDPVGFSTTPIQSWFDSKTAPGNSMSDVKWLREAEVTHGRIAQLAVVGFIYPSVAGTFPGNDWTGVDAYSYKNPIEEISHVPGEAVAQIIFAMSLIEFRRVILISREGPDRLPGDLGLGQGPNERINPFNLDYSPEEFYEKQVQEIKHCRLAMLGAFGLFCQAANSGVDIGTQIGGALVRPEAVAKAGYFLPEGI 255          
BLAST of NO08G03500 vs. NCBI_GenBank
Match: GAX18319.1 (light-harvesting complex II chlorophyll a/b binding protein 4 [Fistulifera solaris])

HSP 1 Score: 188.7 bits (478), Expect = 2.100e-44
Identity = 101/219 (46.12%), Postives = 134/219 (61.19%), Query Frame = 0
Query:   39 SVALPFDKRPPNLDGSLAGDVGFDPVGFSNN-----PPRPWLIGGSGR--SLKWYREAEIVHGRVAMLAALGWVFPNIYHLPGNEDVGVDAFANVNPLGALTTVPSAGLWQIAATVTAIELFRINRVIRGDKEAGDLGL----GQGEGRWNPFGFNYSEEEYAEKQLQEIKNGRLAMVGILGLLLQASVTGKGIVQQLGGSFDVPEAVSKAGNYFPDGV 247
            S A+P +  P  LDGSL GDVGFDP   S       P    L  G      L WYREAE++HGR+ M+A LG++ P      GNE  GVDA++  NPL A++  P A L+QI A ++ +E  RI R+I  +      G     GQ EG WNPF FNY+ EEYAEKQLQE+K+ RLAM+G+LGL+ QA+ +G  +V QL  +F  P+  +KAG + P+G+
Sbjct:  128 STAIPGESAPALLDGSLPGDVGFDPCFLSTKADLMAPYFNNLFAGQANIDGLTWYREAELMHGRICMIAVLGFIAPGFGTFGGNEWTGVDAYSETNPLAAISAAPGAALFQIFAFMSILEFRRI-RIIFAEGSNYVAGASQKWGQTEGSWNPFNFNYTPEEYAEKQLQEVKHARLAMIGLLGLIFQANASGVSVVDQLSAAFVTPDYYAKAGYFLPEGI 345          
BLAST of NO08G03500 vs. NCBI_GenBank
Match: GAX16656.1 (light-harvesting complex II chlorophyll a/b binding protein 4 [Fistulifera solaris])

HSP 1 Score: 188.7 bits (478), Expect = 2.100e-44
Identity = 101/219 (46.12%), Postives = 134/219 (61.19%), Query Frame = 0
Query:   39 SVALPFDKRPPNLDGSLAGDVGFDPVGFSNN-----PPRPWLIGGSGR--SLKWYREAEIVHGRVAMLAALGWVFPNIYHLPGNEDVGVDAFANVNPLGALTTVPSAGLWQIAATVTAIELFRINRVIRGDKEAGDLGL----GQGEGRWNPFGFNYSEEEYAEKQLQEIKNGRLAMVGILGLLLQASVTGKGIVQQLGGSFDVPEAVSKAGNYFPDGV 247
            S A+P +  P  LDGSL GDVGFDP   S       P    L  G      L WYREAE++HGR+ M+A LG++ P      GNE  GVDA++  NPL A++  P A L+QI A ++ +E  RI R+I  +      G     GQ EG WNPF FNY+ EEYAEKQLQE+K+ RLAM+G+LGL+ QA+ +G  +V QL  +F  P+  +KAG + P+G+
Sbjct:  142 STAIPGESAPALLDGSLPGDVGFDPCFLSTKADLMAPYFNNLFAGQANIDGLTWYREAELMHGRICMIAVLGFIAPGFGTFGGNEWTGVDAYSETNPLAAISAAPGAALFQIFAFMSILEFRRI-RIIFAEGSNYVAGASQKWGQTEGSWNPFNFNYTPEEYAEKQLQEVKHARLAMIGLLGLIFQANASGVSVVDQLSAAFVTPDYYAKAGYFLPEGI 359          
BLAST of NO08G03500 vs. NCBI_GenBank
Match: XP_002182909.1 (predicted protein, partial [Phaeodactylum tricornutum CCAP 1055/1] >EEC45645.1 predicted protein, partial [Phaeodactylum tricornutum CCAP 1055/1])

HSP 1 Score: 178.7 bits (452), Expect = 2.200e-41
Identity = 96/198 (48.48%), Postives = 126/198 (63.64%), Query Frame = 0
Query:   39 SVALPFDKRPPNLDGSLAGDVGFDPVGFS---NNPPRPWLIG-----GSGRSLKWYREAEIVHGRVAMLAALGWVFPNIYHLPGNEDVGVDAFANVNPLGALTTVPSAGLWQIAATVTAIELFRINRVIR--GDKEAGD-LGLGQGEGRWNPFGFNYSEEEYAEKQLQEIKNGRLAMVGILGLLLQASVTGKGIVQQL 226
            S+A+P++  P  LDGSL GDVGFDP   S   +    P+  G      S   L WYREAE++HGR+ M+A +G++ P      GN   G DAF+N NPL AL   PSA ++QI A + A+E  RIN + +   + + GD    GQG+GRWNP G NYS EEY EKQLQE+K+ RLAMVG+LGLL QA+ +G  ++ QL
Sbjct:    1 SIAIPYEGAPALLDGSLVGDVGFDPCFLSTKADTVAAPYFNGIFNNEVSIDGLTWYREAELMHGRICMIAVVGFIAPGFGTFEGNAWTGADAFSNTNPLEALGAAPSASIFQIFAFMAALEFRRINIIFQQGNNYQPGDSQRWGQGDGRWNPLGLNYSPEEYEEKQLQEVKHARLAMVGLLGLLFQANASGVNVIDQL 198          
The following BLAST results are available for this feature:
BLAST of NO08G03500 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
XP_005854284.18.100e-12994.31light-harvesting protein [Nannochloropsis gaditana... [more]
EWM26813.18.100e-12994.31light-harvesting protein [Nannochloropsis gaditana... [more]
CEL98288.11.100e-8262.16unnamed protein product [Vitrella brassicaformis C... [more]
CBJ31718.11.000e-6756.00Light harvesting complex protein [Ectocarpus silic... [more]
XP_009034395.15.200e-5952.57hypothetical protein AURANDRAFT_71070 [Aureococcus... [more]
XP_002287377.14.600e-4745.53fucoxanthin chl a/c protein, lhca clade [Thalassio... [more]
OEU09133.12.300e-4646.12fucoxanthin chl a/c protein [Fragilariopsis cylind... [more]
GAX18319.12.100e-4446.12light-harvesting complex II chlorophyll a/b bindin... [more]
GAX16656.12.100e-4446.12light-harvesting complex II chlorophyll a/b bindin... [more]
XP_002182909.12.200e-4148.48predicted protein, partial [Phaeodactylum tricornu... [more]

Pages

back to top
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL109nonsL109Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR083ncniR083Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR141ngnoR141Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK008660NSK008660Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO08G03500.1NO08G03500.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|583033gene_3684Nannochloropsis oceanica (N. oceanica CCMP1779)gene
LHCP31gene3715Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO08G03500.1NO08G03500.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO08G03500 ID=NO08G03500|Name=NO08G03500|organism=Nannochloropsis oceanica|type=gene|length=741bp
ATGAAGGTTATTGCCCTCTTGTCCCTGGCCTCGGTAGCGAGCGCCTTCAT
TGCCCCTGCGCCCCTGGCCCGCCGTGCCTCCCGCTCTGTGCGCATGGCCG
CCGACGACGACCTCTCCGTCGCCCTGCCTTTCGACAAGCGCCCCCCTAAC
CTGGATGGTAGCCTTGCCGGTGATGTTGGATTTGACCCGGTGGGTTTCTC
CAACAATCCCCCCCGCCCTTGGTTGATTGGCGGCTCTGGCCGTTCCCTCA
AGTGGTACCGCGAGGCAGAGATCGTCCACGGCCGCGTGGCCATGCTTGCC
GCCCTCGGATGGGTTTTCCCCAACATCTACCACTTGCCCGGTAATGAGGA
TGTGGGCGTAGATGCCTTTGCAAACGTGAACCCCCTGGGCGCCTTGACCA
CAGTCCCGTCCGCGGGCCTCTGGCAGATTGCGGCCACCGTCACTGCCATT
GAGCTTTTCCGCATCAACCGCGTCATTCGTGGAGATAAGGAGGCAGGGGA
CCTCGGCCTCGGCCAAGGTGAGGGACGTTGGAACCCGTTTGGCTTCAACT
ATTCGGAGGAGGAGTACGCCGAGAAGCAGTTGCAGGAGATCAAGAATGGC
CGACTGGCCATGGTGGGCATCCTCGGCCTCCTCCTCCAGGCGTCGGTGAC
GGGCAAGGGGATCGTCCAACAGCTCGGCGGCTCGTTCGACGTGCCCGAGG
CTGTTTCTAAGGCTGGAAACTACTTCCCGGACGGCGTCTAA
back to top

protein sequence of NO08G03500.1

>NO08G03500.1-protein ID=NO08G03500.1-protein|Name=NO08G03500.1|organism=Nannochloropsis oceanica|type=polypeptide|length=247bp
MKVIALLSLASVASAFIAPAPLARRASRSVRMAADDDLSVALPFDKRPPN
LDGSLAGDVGFDPVGFSNNPPRPWLIGGSGRSLKWYREAEIVHGRVAMLA
ALGWVFPNIYHLPGNEDVGVDAFANVNPLGALTTVPSAGLWQIAATVTAI
ELFRINRVIRGDKEAGDLGLGQGEGRWNPFGFNYSEEEYAEKQLQEIKNG
RLAMVGILGLLLQASVTGKGIVQQLGGSFDVPEAVSKAGNYFPDGV*
back to top
Synonyms
Publications