NO08G03490, NO08G03490 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO08G03490 vs. NCBI_GenBank
Match: EWM26807.1 (Prohibitin [Nannochloropsis gaditana]) HSP 1 Score: 457.2 bits (1175), Expect = 4.100e-125 Identity = 293/313 (93.61%), Postives = 304/313 (97.12%), Query Frame = 0 Query: 1 MNAAKKFAENLGSKIPKGAGMXXXXXXXXXXXXXXXXXXXXXXXXXXGLGVVAYAGYNSFYTVEGGHRALLFNRLLGVKEEVYIEGMHIMIPWFEMPVIYDIRPKPRMIQSLTGSKDMQMVNITIRVLSKPDASQLRWIFRTLGKDYDERVLPSIVNEVSKAVVAKYNAAELLTKREMVSSQIRLQLEKRAKEFRIVLDDVSITHLTFSREYTNAVEAKQVAQQEAERXXXXXXXXXXXXXXXXXXXXXXXXSAALVGKAIRENPAFIKLRKIDAARDIANVVSASGQKVYLSADSLLLNMYTGDEEKGAKRR 314 MNAAKKFAENLGSKIPKGAGMXXXXXXXXXXXXXXXXXXXXXXXXXX YAGYNSFYTVEGGHRALLFNRL+GVKEEVY+EGMH MIPWF+MP+IYDIRPKPRMIQSLTGSKDMQMVNITIRVLSKPD++QLRWIFRTLG+DYDERVLPSIVNEVSKAVVAKYNAAELLTKREMVS+QIRLQLEKRAKEFRIVLDDVSITHLTFSREYTNAVEAKQVAQQEAERXXXXXXXXXXXXXXXXXXXXXXXXSAALVGKAIRENPAFIKLRKIDAARDIANVVS+SGQKVYLSADSLLLNMY+GDEEK K+R Sbjct: 1 MNAAKKFAENLGSKIPKGAGMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLYAGYNSFYTVEGGHRALLFNRLIGVKEEVYMEGMHFMIPWFDMPIIYDIRPKPRMIQSLTGSKDMQMVNITIRVLSKPDSAQLRWIFRTLGRDYDERVLPSIVNEVSKAVVAKYNAAELLTKREMVSTQIRLQLEKRAKEFRIVLDDVSITHLTFSREYTNAVEAKQVAQQEAERXXXXXXXXXXXXXXXXXXXXXXXXSAALVGKAIRENPAFIKLRKIDAARDIANVVSSSGQKVYLSADSLLLNMYSGDEEKSGKKR 313
BLAST of NO08G03490 vs. NCBI_GenBank
Match: XP_005854286.1 (hypothetical protein NGA_0190001 [Nannochloropsis gaditana CCMP526] >EKU22077.1 hypothetical protein NGA_0190001 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 430.6 bits (1106), Expect = 4.100e-117 Identity = 247/266 (92.86%), Postives = 260/266 (97.74%), Query Frame = 0 Query: 48 GLGVVAYAGYNSFYTVEGGHRALLFNRLLGVKEEVYIEGMHIMIPWFEMPVIYDIRPKPRMIQSLTGSKDMQMVNITIRVLSKPDASQLRWIFRTLGKDYDERVLPSIVNEVSKAVVAKYNAAELLTKREMVSSQIRLQLEKRAKEFRIVLDDVSITHLTFSREYTNAVEAKQVAQQEAERXXXXXXXXXXXXXXXXXXXXXXXXSAALVGKAIRENPAFIKLRKIDAARDIANVVSASGQKVYLSADSLLLNMYTGDEEKGAKRR 314 G+ + YAGYNSFYTVEGGHRALLFNRL+GVKEEVY+EGMH MIPWF+MP+IYDIRPKPRMIQSLTGSKDMQMVNITIRVLSKPD++QLRWIFRTLG+DYDERVLPSIVNEVSKAVVAKYNAAELLTKREMVS+QIRLQLEKRAKEFRIVLDDVSITHLTFSREYTNAVEAKQVAQQEAERXXXXXXXXXXXXXXXXXXXXXXXXSAALVGKAIRENPAFIKLRKIDAARDIANVVS+SGQKVYLSADSLLLNMY+GDEEK K+R Sbjct: 12 GVTGILYAGYNSFYTVEGGHRALLFNRLIGVKEEVYMEGMHFMIPWFDMPIIYDIRPKPRMIQSLTGSKDMQMVNITIRVLSKPDSAQLRWIFRTLGRDYDERVLPSIVNEVSKAVVAKYNAAELLTKREMVSTQIRLQLEKRAKEFRIVLDDVSITHLTFSREYTNAVEAKQVAQQEAERXXXXXXXXXXXXXXXXXXXXXXXXSAALVGKAIRENPAFIKLRKIDAARDIANVVSSSGQKVYLSADSLLLNMYSGDEEKSGKKR 277
BLAST of NO08G03490 vs. NCBI_GenBank
Match: XP_009033207.1 (hypothetical protein AURANDRAFT_59857 [Aureococcus anophagefferens] >EGB12121.1 hypothetical protein AURANDRAFT_59857 [Aureococcus anophagefferens]) HSP 1 Score: 299.7 bits (766), Expect = 1.100e-77 Identity = 156/269 (57.99%), Postives = 199/269 (73.98%), Query Frame = 0 Query: 48 GLGVVAYAGYNSFYTVEGGHRALLFNRLLGVKEEVYIEGMHIMIPWFEMPVIYDIRPKPRMIQSLTGSKDMQMVNITIRVLSKPDASQLRWIFRTLGKDYDERVLPSIVNEVSKAVVAKYNAAELLTKREMVSSQIRLQLEKRAKEFRIVLDDVSITHLTFSREYTNAVEAKQVAQQEAERXXXXXXXXXXXXXXXXXXXXXXXXSAALVGKAIRENPAFIKLRKIDAARDIANVVSASGQKVYLSADSLLLNMYTGD---EEKGAKRR 314 G+ V + GYNS +TV+GG RA+L++R+ GVK+ VY EGMH +P E PV +D+R +PR +QSLTGSKD+QMVNIT+RVLSKP+ S+L WI++ LG DYD+RVLPSIVNEV+KAVVA YNA+ELLTKRE VS++IR +L RA +FRI+LDDVSITHL+FS EYT AVEAKQVAQQ++ER SA L+GKAI+ NP F+KLRKID A++IA V+ S KVYL+ADSLL+N+ + E+ AK+R Sbjct: 44 GISAVGFLGYNSVFTVQGGQRAVLWSRISGVKDAVYAEGMHPRVPLIEYPVPFDVRTRPRNVQSLTGSKDLQMVNITLRVLSKPNTSELAWIYKRLGHDYDDRVLPSIVNEVTKAVVACYNASELLTKREQVSNEIRHRLVVRAADFRIILDDVSITHLSFSHEYTAAVEAKQVAQQDSERARYIVEKAIQEKKSIIVKAEGEAQSARLIGKAIQNNPGFVKLRKIDTAKEIAGTVARSQGKVYLNADSLLINILGNEQLGEDTSAKKR 312
BLAST of NO08G03490 vs. NCBI_GenBank
Match: GAX20499.1 (hypothetical protein FisN_24Hu251 [Fistulifera solaris]) HSP 1 Score: 298.5 bits (763), Expect = 2.400e-77 Identity = 150/258 (58.14%), Postives = 195/258 (75.58%), Query Frame = 0 Query: 51 VVAYAGYNSFYTVEGGHRALLFNRLLGVKEEVYIEGMHIMIPWFEMPVIYDIRPKPRMIQSLTGSKDMQMVNITIRVLSKPDASQLRWIFRTLGKDYDERVLPSIVNEVSKAVVAKYNAAELLTKREMVSSQIRLQLEKRAKEFRIVLDDVSITHLTFSREYTNAVEAKQVAQQEAERXXXXXXXXXXXXXXXXXXXXXXXXSAALVGKAIRENPAFIKLRKIDAARDIANVVSASGQKVYLSADSLLLNMYTGDEEK 309 V++Y YNS YTV+GGHRA++FNR +G+K+ VY EG++ IPWFE PVI+DIR +P +Q+LTGS D+QMV I IRVL KPD ++L WI+R LG++YDERVLPSI+NE +KAVVA+YNA ELLTKR+ VS +I L L+KRA F I+L+DV+ITHL FS EY AVEAKQVAQQ+AER SA L+G+A+R+NP F+KLR+IDAARDIA++V++SG K+YL+AD+LLLN+ +EK Sbjct: 50 VLSYGAYNSVYTVQGGHRAVVFNRFVGMKDTVYGEGLNFNIPWFEHPVIFDIRTRPVNLQTLTGSMDLQMVTIAIRVLHKPDPNKLVWIYRFLGENYDERVLPSIMNECAKAVVARYNANELLTKRDEVSREISLDLQKRAANFNIILEDVAITHLAFSPEYAKAVEAKQVAQQDAERGKYIVMGAQQEKKTIITKARGEAESAELIGQAVRKNPGFMKLRRIDAARDIADIVASSGNKIYLNADTLLLNLLKDKDEK 307
BLAST of NO08G03490 vs. NCBI_GenBank
Match: GAX13506.1 (hypothetical protein FisN_27Lu002 [Fistulifera solaris]) HSP 1 Score: 298.5 bits (763), Expect = 2.400e-77 Identity = 149/258 (57.75%), Postives = 195/258 (75.58%), Query Frame = 0 Query: 51 VVAYAGYNSFYTVEGGHRALLFNRLLGVKEEVYIEGMHIMIPWFEMPVIYDIRPKPRMIQSLTGSKDMQMVNITIRVLSKPDASQLRWIFRTLGKDYDERVLPSIVNEVSKAVVAKYNAAELLTKREMVSSQIRLQLEKRAKEFRIVLDDVSITHLTFSREYTNAVEAKQVAQQEAERXXXXXXXXXXXXXXXXXXXXXXXXSAALVGKAIRENPAFIKLRKIDAARDIANVVSASGQKVYLSADSLLLNMYTGDEEK 309 V++Y YNS YTV+GGHRA++FNR +G+K+ VY EG++ IPWFE PVI+DIR +P +Q+LTGS D+QMV I IRVL KPD ++L WI+R LG++YDERVLPS++NE +KAVVA+YNA ELLTKR+ VS +I L L+KRA F I+L+DV+ITHL FS EY AVEAKQVAQQ+AER SA L+G+A+R+NP F+KLR+IDAARDIA++V++SG K+YL+AD+LLLN+ +EK Sbjct: 35 VLSYGAYNSVYTVQGGHRAVVFNRFVGMKDTVYGEGLNFNIPWFEHPVIFDIRTRPVNLQTLTGSMDLQMVTIAIRVLHKPDPNKLVWIYRFLGENYDERVLPSVMNECAKAVVARYNANELLTKRDEVSREISLDLQKRASNFNIILEDVAITHLAFSPEYAKAVEAKQVAQQDAERGKYIVMGAQQEKKTIITKARGEAESAELIGQAVRKNPGFMKLRRIDAARDIADIVASSGNKIYLNADTLLLNLLKDKDEK 292
BLAST of NO08G03490 vs. NCBI_GenBank
Match: OEU16482.1 (prohibitin 2 [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 293.9 bits (751), Expect = 5.900e-76 Identity = 147/262 (56.11%), Postives = 194/262 (74.05%), Query Frame = 0 Query: 50 GVVAYAGYNSFYTVEGGHRALLFNRLLGVKEEVYIEGMHIMIPWFEMPVIYDIRPKPRMIQSLTGSKDMQMVNITIRVLSKPDASQLRWIFRTLGKDYDERVLPSIVNEVSKAVVAKYNAAELLTKREMVSSQIRLQLEKRAKEFRIVLDDVSITHLTFSREYTNAVEAKQVAQQEAERXXXXXXXXXXXXXXXXXXXXXXXXSAALVGKAIRENPAFIKLRKIDAARDIANVVSASGQKVYLSADSLLLNMYTGDEEKGAK 312 G +AY YNS YTV GGHRA++FNR+ G+K+ VY EG++ IPWFE P+IYDIR +P +Q+LTGSKD+QMV I +RVL KP+ ++L WI++TLG +YDER+LPS++NE +KA+VA+YNA ELLTKR++VS I L++RA +F IVLDDV+ITHL+FS EY AVEAKQVAQQ+AE+ SA L+G A+++NP F+KLR+ID ARDIA++V+ SG KVYL+ADSLLLN+ +EK K Sbjct: 46 GGLAYGTYNSIYTVPGGHRAVMFNRVTGMKDSVYGEGLNFNIPWFERPIIYDIRTRPVNLQTLTGSKDLQMVTIAVRVLHKPNPNKLVWIYQTLGMNYDERILPSVMNESAKAIVARYNANELLTKRDLVSRAISEDLQRRASQFNIVLDDVAITHLSFSPEYARAVEAKQVAQQDAEKAKYVVLGAQQEKKTIITRARGEAESAELIGLAVKKNPGFMKLRRIDVARDIADIVAKSGNKVYLNADSLLLNLVGDADEKFEK 307
BLAST of NO08G03490 vs. NCBI_GenBank
Match: CEO94790.1 (hypothetical protein PBRA_003603 [Plasmodiophora brassicae]) HSP 1 Score: 291.6 bits (745), Expect = 2.900e-75 Identity = 143/254 (56.30%), Postives = 188/254 (74.02%), Query Frame = 0 Query: 48 GLGVVAYAGYNSFYTVEGGHRALLFNRLLGVKEEVYIEGMHIMIPWFEMPVIYDIRPKPRMIQSLTGSKDMQMVNITIRVLSKPDASQLRWIFRTLGKDYDERVLPSIVNEVSKAVVAKYNAAELLTKREMVSSQIRLQLEKRAKEFRIVLDDVSITHLTFSREYTNAVEAKQVAQQEAERXXXXXXXXXXXXXXXXXXXXXXXXSAALVGKAIRENPAFIKLRKIDAARDIANVVSASGQKVYLSADSLLLNM 302 G G +AY GYNS +T GGHRA+++NR++GVK+ VY EGMH MIPWFE P I+D+R KP+ I S TG++DMQMVNI++RVL KPD SQL IFR G DYD+R+LPSIVNE KAV+A+YNA++L+TKRE +S +IR L++RAK+F I+LDDVSITHL+F EYT AVE+KQVAQQEAER SA ++GKA+ NP F++LR+++AA+ I+ +S+S KVYL+A+ LLLN+ Sbjct: 27 GAGAIAYGGYNSLFTCPGGHRAVMYNRVVGVKDAVYPEGMHFMIPWFETPTIFDVRTKPKKISSPTGTRDMQMVNISLRVLYKPDISQLPTIFRRFGSDYDDRILPSIVNETLKAVIAQYNASQLITKREQISREIRNHLQERAKDFYILLDDVSITHLSFGSEYTAAVESKQVAQQEAERAKFIVERALQDKRSNIIHAEGEAQSAEMIGKALARNPGFVELRRMEAAKKISGALSSSPNKVYLNAEGLLLNL 280
BLAST of NO08G03490 vs. NCBI_GenBank
Match: XP_002180691.1 (prohibitin-like protein, partial [Phaeodactylum tricornutum CCAP 1055/1] >EEC48099.1 prohibitin-like protein, partial [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 290.8 bits (743), Expect = 5.000e-75 Identity = 149/244 (61.07%), Postives = 186/244 (76.23%), Query Frame = 0 Query: 58 NSFYTVEGGHRALLFNRLLGVKEEVYIEGMHIMIPWFEMPVIYDIRPKPRMIQSLTGSKDMQMVNITIRVLSKPDASQLRWIFRTLGKDYDERVLPSIVNEVSKAVVAKYNAAELLTKREMVSSQIRLQLEKRAKEFRIVLDDVSITHLTFSREYTNAVEAKQVAQQEAERXXXXXXXXXXXXXXXXXXXXXXXXSAALVGKAIRENPAFIKLRKIDAARDIANVVSASGQKVYLSADSLLLNM 302 NS YTV+GGHRA++FNRL+G+KE VY EG++ IPW E P+IYDIR +P +Q+LTGSKD+QMV I IRVL KP+ +QL WI+R LG +YDERVLPSI+NE +KAVVA+YNA ELLTKR++VS +I LEKRA+ F I L+DV+ITHL FS EY AVEAKQVAQQ+AER SA L+G A+R+NP F+KLR+IDAARDIA++V++SG KVYL+ADSLLLN+ Sbjct: 1 NSVYTVQGGHRAVVFNRLVGMKETVYGEGLNFNIPWLERPIIYDIRTRPVNLQTLTGSKDLQMVTIAIRVLHKPNPNQLVWIYRMLGINYDERVLPSIMNECAKAVVARYNANELLTKRDVVSKEISFDLEKRARIFNIQLEDVAITHLAFSPEYARAVEAKQVAQQDAERAKYIVLGAQQEKKTIITKARGEAESAELIGTAVRQNPGFMKLRRIDAARDIADIVASSGNKVYLNADSLLLNL 244
BLAST of NO08G03490 vs. NCBI_GenBank
Match: EJK74458.1 (hypothetical protein THAOC_03860 [Thalassiosira oceanica]) HSP 1 Score: 290.4 bits (742), Expect = 6.600e-75 Identity = 144/262 (54.96%), Postives = 191/262 (72.90%), Query Frame = 0 Query: 50 GVVAYAGYNSFYTVEGGHRALLFNRLLGVKEEVYIEGMHIMIPWFEMPVIYDIRPKPRMIQSLTGSKDMQMVNITIRVLSKPDASQLRWIFRTLGKDYDERVLPSIVNEVSKAVVAKYNAAELLTKREMVSSQIRLQLEKRAKEFRIVLDDVSITHLTFSREYTNAVEAKQVAQQEAERXXXXXXXXXXXXXXXXXXXXXXXXSAALVGKAIRENPAFIKLRKIDAARDIANVVSASGQKVYLSADSLLLNMYTGDEEKGAK 312 G + Y YNS +TV+GGHRA+++NR++G+K+ VY EG++ +PWFE PV+YDIR +P +Q+LTGSKD+QMV + +RVL KPD SQL W++R LGK+YDER+LPS++NE +KAVVA+YNA ELLTKRE VS+ I +L R F ++L+DV+ITHL FS EY AVEAKQVAQQEAER SA L+G A++ NP F+KLR+IDAA+DIA++VS SG ++YL+ADSLLLN+ +EK K Sbjct: 49 GGLGYGAYNSVFTVDGGHRAVVYNRIIGMKDVVYGEGLNFNVPWFERPVVYDIRTRPVNLQTLTGSKDLQMVTMGVRVLHKPDPSQLVWMYRHLGKNYDERILPSLMNECAKAVVARYNANELLTKREEVSASISRELSARCAGFHVLLEDVAITHLAFSPEYAKAVEAKQVAQQEAERAKYIVLGAVQEKKTIITRARGEAESAELIGTAVKRNPGFMKLRRIDAAKDIADIVSGSGNRIYLNADSLLLNLLGDADEKFTK 310
BLAST of NO08G03490 vs. NCBI_GenBank
Match: XP_004360579.1 (prohibitin [Cavenderia fasciculata] >EGG22728.1 prohibitin [Cavenderia fasciculata]) HSP 1 Score: 288.1 bits (736), Expect = 3.300e-74 Identity = 147/262 (56.11%), Postives = 188/262 (71.76%), Query Frame = 0 Query: 50 GVVAYAGYNSFYTVEGGHRALLFNRLLGVKEEVYIEGMHIMIPWFEMPVIYDIRPKPRMIQSLTGSKDMQMVNITIRVLSKPDASQLRWIFRTLGKDYDERVLPSIVNEVSKAVVAKYNAAELLTKREMVSSQIRLQLEKRAKEFRIVLDDVSITHLTFSREYTNAVEAKQVAQQEAERXXXXXXXXXXXXXXXXXXXXXXXXSAALVGKAIRENPAFIKLRKIDAARDIANVVSASGQKVYLSADSLLLNMYTGDEEKGAK 312 GV YNS VEGGHRA++FNR +G+K++VY EG H ++PWFE P IYD+R KPR I SLTGSKD+QMVNITIRVLSKP + L I+R+LGKDYDERVLPSIVNEV K+VVA++NA++L+T+RE VS I +L RA++F I LDDVSITHL F +EY A+E+KQVAQQ+AER SA L+ +I++NPAF++LRKI+AARDIA V+S S KV++ +++LLLN+ DE AK Sbjct: 30 GVALVGAYNSLLNVEGGHRAIVFNRFVGIKQKVYTEGTHFIVPWFERPEIYDVRAKPRNIASLTGSKDLQMVNITIRVLSKPSVAHLPTIYRSLGKDYDERVLPSIVNEVLKSVVAQFNASQLITQREQVSRLIYKRLSDRARDFHIELDDVSITHLNFGKEYAAAIESKQVAQQDAERARFMVEKAQQDKRSIIVKAEGESQSAKLISDSIKQNPAFLQLRKIEAARDIAQVISKSQNKVFVDSENLLLNLNFSDEAPPAK 291 The following BLAST results are available for this feature:
BLAST of NO08G03490 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO08G03490 ID=NO08G03490|Name=NO08G03490|organism=Nannochloropsis oceanica|type=gene|length=1477bpback to top protein sequence of NO08G03490.1 >NO08G03490.1-protein ID=NO08G03490.1-protein|Name=NO08G03490.1|organism=Nannochloropsis oceanica|type=polypeptide|length=314bpback to top Synonyms
Publications
|