NO08G03470, NO08G03470 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO08G03470 vs. NCBI_GenBank
Match: XP_005854283.1 (yip1 domain-containing protein [Nannochloropsis gaditana CCMP526] >EKU22074.1 yip1 domain-containing protein [Nannochloropsis gaditana CCMP526] >EWM26791.1 yip1 domain-containing protein [Nannochloropsis gaditana]) HSP 1 Score: 307.0 bits (785), Expect = 5.400e-80 Identity = 175/224 (78.12%), Postives = 186/224 (83.04%), Query Frame = 0 Query: 37 PGSNYYGQGMTG-GTXXXXXXXXV-----------GVGQWGGSMDSVGVEEDYSMEPPLLEELGINFRHIGEKTKTVFMPMRSMDEHIMDDADLAGPLFFLLCFGIFLLLTGKVHFGYIYGFGVSGCLAMYLVLNLLSVKEIDIWRVCSILGYGLLPVIVLSFLGIAVSLKGPVGQGIATFTIAWSTYSSTRLFEKALNMSQQRYLVAYPVALVYAIFVLITVF 249 PG +Y GM+G GTXXXXXXXX GQ EEDYSMEPPLL ELGINF+HI EKTKTV MP+ SMDEHIMDDADLAGPLFFLL FGIFLL+TGKVHFGYIYGFGVSGC+AMYLVLNLLS K+ID+WRVCSILGYGLLPVI L+FLGIAVSLKG VGQG+AT TIAWSTY+STRLFEKALNMSQQRYLVAYPVALVYAIFVLITVF Sbjct: 31 PGGSYPAPGMSGAGTXXXXXXXXXXXXXXXXXXNGXXGQXXXXXXXXXXEEDYSMEPPLLVELGINFQHIWEKTKTVLMPLGSMDEHIMDDADLAGPLFFLLSFGIFLLMTGKVHFGYIYGFGVSGCIAMYLVLNLLSPKDIDVWRVCSILGYGLLPVIGLAFLGIAVSLKGGVGQGLATLTIAWSTYASTRLFEKALNMSQQRYLVAYPVALVYAIFVLITVF 254
BLAST of NO08G03470 vs. NCBI_GenBank
Match: OQR82327.1 (hypothetical protein ACHHYP_16226 [Achlya hypogyna]) HSP 1 Score: 213.8 bits (543), Expect = 6.200e-52 Identity = 110/190 (57.89%), Postives = 146/190 (76.84%), Query Frame = 0 Query: 62 GQWGGSMDSVGVEEDYSMEPPLLEELGINFRHIGEKTKTVFMPMRSMDEHIMDDADLAGPLFFLLCFGIFLLLTGKVHFGYIYGFGVSGCLAMYLVLNLLS-VKEIDIWRVCSILGYGLLPVIVLSFLGIAVSLKG--PVGQGIATFTIAWSTYSSTRLFEKALNMSQQRYLVAYPVALVYAIFVLITVF 249 GQ+G VG +EDY EPPLLEELG+NF HI KT++V +P + + EHI+DD DLAGPL F FG LLL+GK+HFGYIYGFGV G + M+ ++NLLS + IDI+RVCS+LGY LLP+I L+ + I +S+KG +G +A ++AWST+++TR FEKAL+MS+QR+L+AYP A+VY+ FVLITVF Sbjct: 111 GQYG-----VGGDEDYENEPPLLEELGVNFGHIWMKTQSVLLPTKQITEHILDDTDLAGPLVFCFIFGTCLLLSGKIHFGYIYGFGVFGWVFMWAIMNLLSPTRTIDIYRVCSVLGYCLLPIIFLAAVNIIISVKGLNLIGFALAVLSVAWSTHTATRFFEKALHMSEQRFLIAYPTAMVYSCFVLITVF 295
BLAST of NO08G03470 vs. NCBI_GenBank
Match: CBJ30845.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 212.6 bits (540), Expect = 1.400e-51 Identity = 106/175 (60.57%), Postives = 130/175 (74.29%), Query Frame = 0 Query: 74 EEDYSMEPPLLEELGINFRHIGEKTKTVFMPMRSMDEHIMDDADLAGPLFFLLCFGIFLLLTGKVHFGYIYGFGVSGCLAMYLVLNLLSVKEIDIWRVCSILGYGLLPVIVLSFLGIAVSLKGPVGQGIATFTIAWSTYSSTRLFEKALNMSQQRYLVAYPVALVYAIFVLITVF 249 EEDY EPPLLEELGINF HI KT V +P + +D + +DD DLAGPL F LCFG+ LLLTGK HFGYIYGFG+ GC+A +VLNL+ K ID+W+ S+LGY LLPVI L+ +GI L+G +G + +AW T S+TRLFE+ L M +QRYLVAYPV L+YA FVLITV+ Sbjct: 171 EEDYENEPPLLEELGINFEHIWSKTLAVILPTKKIDINYLDDTDLAGPLVFCLCFGLCLLLTGKPHFGYIYGFGMFGCIATAMVLNLIGEKPIDLWKTTSVLGYCLLPVIGLAAMGIVTDLRGNLGHVLGFVAVAWCTISATRLFEEYLEMRRQRYLVAYPVGLLYACFVLITVY 345
BLAST of NO08G03470 vs. NCBI_GenBank
Match: CCA20797.1 (conserved hypothetical protein [Albugo laibachii Nc14]) HSP 1 Score: 210.3 bits (534), Expect = 6.800e-51 Identity = 109/178 (61.24%), Postives = 140/178 (78.65%), Query Frame = 0 Query: 74 EEDYSMEPPLLEELGINFRHIGEKTKTVFMPMRSMDEHIMDDADLAGPLFFLLCFGIFLLLTGKVHFGYIYGFGVSGCLAMYLVLNLLS-VKEIDIWRVCSILGYGLLPVIVLSFLGIAVSLK--GPVGQGIATFTIAWSTYSSTRLFEKALNMSQQRYLVAYPVALVYAIFVLITVF 249 E DY EPPLLEELGI+F I KT++V +PM+ ++EHI+DDADLAGPL + FG+ LLL+ KVHFGYIYGFGV CL+MYL++NLLS + IDI+RVCS+LGY LLP+I L+ L I +S+K G VG +A+ WST++++R FEKAL MS+Q+YLVAYP+ LVY+ FVLITVF Sbjct: 50 ESDYDNEPPLLEELGIHFEQIWVKTQSVLLPMKQINEHILDDADLAGPLVYCFVFGMCLLLSAKVHFGYIYGFGVISCLSMYLLMNLLSPQRTIDIYRVCSVLGYCLLPIIALAALNIVLSIKDLGFVGFAVASVCAMWSTHTASRFFEKALFMSEQKYLVAYPIMLVYSCFVLITVF 227
BLAST of NO08G03470 vs. NCBI_GenBank
Match: GAX96646.1 (Hypothetical protein PINS_004528 [Pythium insidiosum]) HSP 1 Score: 210.3 bits (534), Expect = 6.800e-51 Identity = 108/178 (60.67%), Postives = 138/178 (77.53%), Query Frame = 0 Query: 74 EEDYSMEPPLLEELGINFRHIGEKTKTVFMPMRSMDEHIMDDADLAGPLFFLLCFGIFLLLTGKVHFGYIYGFGVSGCLAMYLVLNLLS-VKEIDIWRVCSILGYGLLPVIVLSFLGIAVSLK--GPVGQGIATFTIAWSTYSSTRLFEKALNMSQQRYLVAYPVALVYAIFVLITVF 249 +EDY EPPLLEELGINF HI KT++V +P + ++EHI+DDADLAGPL + FG LLL KVHFGYIYGFGV CL MYL++ LLS + IDI+RVCS+LGY LLP+I L+ + I +S+K G +G +A+ I WST++++R FEKAL MS+Q+YL+AYPV LVY+ FVLITVF Sbjct: 77 DEDYXNEPPLLEELGINFEHIWTKTQSVLLPTKQINEHILDDADLAGPLVYCFVFGFCLLLAAKVHFGYIYGFGVLSCLFMYLLMXLLSPERSIDIYRVCSVLGYCLLPIIALAAVNIFISVKDLGLIGFAMASLCILWSTHTASRFFEKALYMSEQKYLIAYPVGLVYSCFVLITVF 254
BLAST of NO08G03470 vs. NCBI_GenBank
Match: ETI44246.1 (hypothetical protein F443_11043 [Phytophthora parasitica P1569] >ETL90842.1 hypothetical protein L917_10556 [Phytophthora parasitica] >ETM44137.1 hypothetical protein L914_10600 [Phytophthora parasitica]) HSP 1 Score: 207.2 bits (526), Expect = 5.800e-50 Identity = 111/191 (58.12%), Postives = 140/191 (73.30%), Query Frame = 0 Query: 61 VGQWGGSMDSVGVEEDYSMEPPLLEELGINFRHIGEKTKTVFMPMRSMDEHIMDDADLAGPLFFLLCFGIFLLLTGKVHFGYIYGFGVSGCLAMYLVLNLLS-VKEIDIWRVCSILGYGLLPVIVLSFLGIAVSLK--GPVGQGIATFTIAWSTYSSTRLFEKALNMSQQRYLVAYPVALVYAIFVLITVF 249 VG G D G E++++ EPPLLEELGINF HI KT +V +P + ++EHI+DDADLAGPL F FG+ LLL KVHFGYIYGFGV CL MYL++NLLS + IDI+RVCS+LGY LLP+I L+ + I VS+K G G +A+ WST++++R FEKAL M++Q+YLV YP LVYA FVLI VF Sbjct: 54 VGSSAGYYDDDGDEDEFANEPPLLEELGINFEHIWAKTVSVLLPTKQINEHILDDADLAGPLVFCFLFGMCLLLAAKVHFGYIYGFGVLSCLFMYLLMNLLSPERTIDIYRVCSVLGYCLLPIIGLAAINIVVSIKDLGIAGFLLASVCTLWSTHTASRFFEKALYMTEQKYLVMYPTMLVYACFVLIAVF 244
BLAST of NO08G03470 vs. NCBI_GenBank
Match: XP_008607901.1 (hypothetical protein SDRG_04029 [Saprolegnia diclina VS20] >EQC38309.1 hypothetical protein SDRG_04029 [Saprolegnia diclina VS20]) HSP 1 Score: 205.7 bits (522), Expect = 1.700e-49 Identity = 104/178 (58.43%), Postives = 137/178 (76.97%), Query Frame = 0 Query: 74 EEDYSMEPPLLEELGINFRHIGEKTKTVFMPMRSMDEHIMDDADLAGPLFFLLCFGIFLLLTGKVHFGYIYGFGVSGCLAMYLVLNLLS-VKEIDIWRVCSILGYGLLPVIVLSFLGIAVSLK--GPVGQGIATFTIAWSTYSSTRLFEKALNMSQQRYLVAYPVALVYAIFVLITVF 249 +EDY EPPLLEELG+NF HI KT++V +P + + EHI+DD DLAGPL F FG LLL+GK+HFGYIYGFGV G + M+ ++NLLS + IDI+RVCS+LGY LLP+I+L+ + I VS+K +G +A ++AWST ++TR FEKAL+M QR+L+AYP A+VY+ FVLITVF Sbjct: 121 DEDYENEPPLLEELGVNFGHIWMKTQSVLLPTKEITEHILDDTDLAGPLVFCFVFGTCLLLSGKIHFGYIYGFGVFGWVFMWAIMNLLSPTRTIDIYRVCSVLGYCLLPIILLAAVNIVVSVKSLNYIGLALAFLSVAWSTQTATRFFEKALHMHDQRFLIAYPTAMVYSCFVLITVF 298
BLAST of NO08G03470 vs. NCBI_GenBank
Match: OQR91251.1 (hypothetical protein THRCLA_09057 [Thraustotheca clavata]) HSP 1 Score: 205.7 bits (522), Expect = 1.700e-49 Identity = 112/216 (51.85%), Postives = 150/216 (69.44%), Query Frame = 0 Query: 37 PGSNYYGQ-GMTGGTXXXXXXXXVGVGQWGGSMDSVGVEEDYSMEPPLLEELGINFRHIGEKTKTVFMPMRSMDEHIMDDADLAGPLFFLLCFGIFLLLTGKVHFGYIYGFGVSGCLAMYLVLNLLS-VKEIDIWRVCSILGYGLLPVIVLSFLGIAVSLKG--PVGQGIATFTIAWSTYSSTRLFEKALNMSQQRYLVAYPVALVYAIFVLITVF 249 P SN G TGG +G + + G EEDY EPPLLEELG+NF HI KT +V +P + ++E+I+DD DLAGPL F FG LLL+GK+HFGYIYGFG+ G M+ ++NLLS + ID++RVCS+LGY LLP+I+L+ + I +S+KG VG +A ++ WST+++TR FEKAL+MS QR+L+AYP A+VY+ FVLITVF Sbjct: 114 PNSNGGGSPWFTGGDAQGDMAGTMGRMGDNSTSNQYGGEEDYDNEPPLLEELGVNFNHIWTKTLSVLLPTKQINENILDDTDLAGPLVFCFIFGTCLLLSGKIHFGYIYGFGLFGWAFMWAIMNLLSPTRTIDVYRVCSVLGYCLLPIILLAAINIVISIKGLNYVGFLLAMLSVIWSTHTATRFFEKALHMSDQRFLIAYPTAMVYSCFVLITVF 329
BLAST of NO08G03470 vs. NCBI_GenBank
Match: XP_008907006.1 (hypothetical protein PPTG_13047 [Phytophthora parasitica INRA-310] >ETK84252.1 hypothetical protein L915_10767 [Phytophthora parasitica] >ETL37692.1 hypothetical protein L916_10657 [Phytophthora parasitica] >ETN07721.1 hypothetical protein PPTG_13047 [Phytophthora parasitica INRA-310] >ETO72907.1 hypothetical protein F444_11112 [Phytophthora parasitica P1976] >ETP17296.1 hypothetical protein F441_08305 [Phytophthora parasitica CJ01A1] >ETP42123.1 hypothetical protein F442_10944 [Phytophthora parasitica P10297]) HSP 1 Score: 204.9 bits (520), Expect = 2.900e-49 Identity = 110/191 (57.59%), Postives = 139/191 (72.77%), Query Frame = 0 Query: 61 VGQWGGSMDSVGVEEDYSMEPPLLEELGINFRHIGEKTKTVFMPMRSMDEHIMDDADLAGPLFFLLCFGIFLLLTGKVHFGYIYGFGVSGCLAMYLVLNLLS-VKEIDIWRVCSILGYGLLPVIVLSFLGIAVSLK--GPVGQGIATFTIAWSTYSSTRLFEKALNMSQQRYLVAYPVALVYAIFVLITVF 249 VG D G E++++ EPPLLEELGINF HI KT +V +P + ++EHI+DDADLAGPL F FG+ LLL KVHFGYIYGFGV CL MYL++NLLS + IDI+RVCS+LGY LLP+I L+ + I VS+K G G +A+ WST++++R FEKAL M++Q+YLV YP LVYA FVLI VF Sbjct: 54 VGSSASYYDDDGDEDEFANEPPLLEELGINFEHIWAKTVSVLLPTKQINEHILDDADLAGPLVFCFLFGMCLLLAAKVHFGYIYGFGVLSCLFMYLLMNLLSPERTIDIYRVCSVLGYCLLPIIGLAAINIVVSIKDLGIAGFLLASVCTLWSTHTASRFFEKALYMTEQKYLVMYPTMLVYACFVLIAVF 244
BLAST of NO08G03470 vs. NCBI_GenBank
Match: XP_012198410.1 (hypothetical protein SPRG_04610 [Saprolegnia parasitica CBS 223.65] >KDO30707.1 hypothetical protein SPRG_04610 [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 204.9 bits (520), Expect = 2.900e-49 Identity = 111/210 (52.86%), Postives = 146/210 (69.52%), Query Frame = 0 Query: 47 TGGTXXXXXXXXVGVGQWGGSMDSVG-----VEEDYSMEPPLLEELGINFRHIGEKTKTVFMPMRSMDEHIMDDADLAGPLFFLLCFGIFLLLTGKVHFGYIYGFGVSGCLAMYLVLNLLS-VKEIDIWRVCSILGYGLLPVIVLSFLGIAVSLK--GPVGQGIATFTIAWSTYSSTRLFEKALNMSQQRYLVAYPVALVYAIFVLITVF 249 TGG +G+ G S G +EDY EPPLLEELG+NF HI KT++V +P + + EHI+DD DLAGPL F FG LLL+GK+HFGYIYGFGV G + M+ ++NLLS + IDI+RVCS+LGY LLP+I+L+ + I VS+K +G +A ++AWST ++TR FEKAL+M QR+L+AYP A+VY+ FVLITVF Sbjct: 97 TGGDSAPTSDLTGSMGRMGDGPPSSGRYGDRDDEDYENEPPLLEELGVNFGHIWMKTQSVLLPTKEITEHILDDTDLAGPLVFCFVFGTCLLLSGKIHFGYIYGFGVFGWVFMWAIMNLLSPTRTIDIYRVCSVLGYCLLPIILLAAVNIVVSVKSLNYIGLALAFLSVAWSTQTATRFFEKALHMHDQRFLIAYPTAMVYSCFVLITVF 306 The following BLAST results are available for this feature:
BLAST of NO08G03470 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO08G03470 ID=NO08G03470|Name=NO08G03470|organism=Nannochloropsis oceanica|type=gene|length=2389bpback to top protein sequence of NO08G03470.1 >NO08G03470.1-protein ID=NO08G03470.1-protein|Name=NO08G03470.1|organism=Nannochloropsis oceanica|type=polypeptide|length=249bpback to top Synonyms
Publications
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