NO08G03420, NO08G03420 (gene) Nannochloropsis oceanica

Overview
NameNO08G03420
Unique NameNO08G03420
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length3467
Alignment locationchr8:950673..954139 +

Link to JBrowse

Properties
Property NameValue
DescriptionGtpase activating protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr8genomechr8:950673..954139 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR035969Rab-GTPase_TBC_sf
IPR000195Rab-GTPase-TBC_dom
Homology
[Close]
BLAST of NO08G03420 vs. NCBI_GenBank
Match: EWM26781.1 (gtpase activating protein [Nannochloropsis gaditana])

HSP 1 Score: 576.2 bits (1484), Expect = 1.500e-160
Identity = 383/794 (48.24%), Postives = 435/794 (54.79%), Query Frame = 0 
Query:    1 MSERLSESGSSRESTASNP--FDPSKPQQLPPARTTPNIFQRLQLGKPKSRRTLRPASSTSAPRCIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDAWVGIGSSXXXTSQRISS--STFGHSMSLGMSSGLSSTIIGQPPRPSSNSNAVPGHLKMKARPIPLPSSPSSLPPPSKSVGGASIHGTGSGDPTPSKPRSSHQAMLGGTVSKLNAHLSPTRGISRGDGXXXXXXXXXANVQVSSDIAGGGLETGILGIDLTSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXELQHEDMWDFISXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLGDFLVKLGRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATAKSYTERKFEELMAAEIVDLNKLREQSWGGIPDRYRGTIWRLLLGYLPANRDRREATLKRKRREYAEILPLYFNIAPEERTTQEQEILRQILVDLPRTQPEMPLFHQEETQRCMERVLYVWAIRHPASGYVQGMNDLITPLILVFLAEQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEAQALDVSKVSAEILEQVEADTYWCITKLLDNIQDHYIFSQPGLQRMTFRLQALVERHDPSLHRHFEEEGLQYVQFAFRWMNCLLMRELSLDAIIRIWDTELAEETGGFEVFHVYLCAALLLRFSNHLSTLPFQDLVLFLQDLPTHDWTLHEIEPLLSQAHVLRALYPEFGQPGGARVLPPVGGG 791
            M++RLS+SG S   +  NP  F PS P Q+PPAR  PNIF+RLQLGKPK+RR LR  SS +    I                               D W+GIGSS   + ++ +   S    + +   S+ +S+++ G  PR  SN+ AVPGHLKM+       S+P+     S SV  A+I G   G  + S+ R                  SP       DG                                                                                                                                                                 A SY +RKF+ELM AE+VD+  LREQSWGGIPDR+RGT+WRLLLGYLPA+RDRR ATL+RKRREYAEILP YFN+  EERT QEQE+LRQILVDLPRTQP+MPLFHQEETQRCMERVLY+WA+RHPASGYVQGMNDLITP ILVFLAE+                                            XXXXXXXXXXXXXXXXXXXXXXXXXXX  EAQ+LDV+KV  ++LE+VEAD YWC+ KLLDNIQDHY FSQPGLQRM  RLQALVERHDP LHRH E EGLQYVQFAFRWMNCLLMRELSLDAIIR+WDTELAEE GGFE FHVYLCAA LLRF++HL TLPFQDLVLFLQDLPTH WTLHEIEPLLSQAHVLRALYP+FGQPGGARV+PP  GG
Sbjct:   57 MTQRLSDSGGSHRKSTGNPAVFAPSHPPQVPPARAVPNIFERLQLGKPKTRRALRSPSSPATSNSIAKEEDDAKKKALITGSSGDGNQAGSAANRNKDVWIGIGSSGAGSPRKDAKGLSEVSANQTNHRSTFISTSLAGPSPRKGSNTLAVPGHLKMRTH-----STPAFASSGSASVSTATIMGALGGGSSGSEGRLP----------------SPDPEEVEADG---------------------------------------------------------------------------------------------------------------------------------------------------------------RRALSYVDRKFDELMEAEVVDMALLREQSWGGIPDRHRGTVWRLLLGYLPAHRDRRAATLRRKRREYAEILPSYFNVPAEERTMQEQEMLRQILVDLPRTQPDMPLFHQEETQRCMERVLYLWAVRHPASGYVQGMNDLITPFILVFLAER---------LVHPSSSSLPPSASLSPPATHRGHHDRSLPSPTQVXXXXXXXXXXXXXXXXXXXXXXXXXXXAGEAQSLDVAKVPRQVLEEVEADVYWCMCKLLDNIQDHYTFSQPGLQRMMIRLQALVERHDPPLHRHLESEGLQYVQFAFRWMNCLLMRELSLDAIIRVWDTELAEELGGFEAFHVYLCAAFLLRFADHLRTLPFQDLVLFLQDLPTHSWTLHEIEPLLSQAHVLRALYPDFGQPGGARVMPPTRGG 661
[Close]
BLAST of NO08G03420 vs. NCBI_GenBank
Match: GBG32797.1 (TBC1 domain family member 22B [Aurantiochytrium sp. FCC1311])

HSP 1 Score: 369.4 bits (947), Expect = 2.800e-98
Identity = 187/393 (47.58%), Postives = 245/393 (62.34%), Query Frame = 0 
Query:  382 ATAKSYTERKFEELMAAEIVDLNKLREQSWGGIPDRYRGTIWRLLLGYLPANRDRREATLKRKRREYAEILPLYFNIAPEERTTQEQEILRQILVDLPRTQPEMPLFHQEETQRCMERVLYVWAIRHPASGYVQGMNDLITPLILVFLAEQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEAQALDVSKVSAEILEQVEADTYWCITKLLDNIQDHYIFSQPGLQRMTFRLQALVERHDPSLHRHFEEEGLQYVQFAFRWMNCLLMRELSLDAIIRIWDTELAEETGGFEVFHVYLCAALLLRFSNHLSTLPFQDLVLFLQDLPTHDWTLHEIEPLLSQAHVLRALYPE 775
            A A S  +  F+ L+ A  +DL+KLR  SW  +PDR RG +W+LLLGYLP  R+RR+ATL+RKR+EY + LP+Y+N A  ER+ ++Q++LRQIL+D+PRT P MPLFH +E +R +ER+LY+WAIRHPASGYVQGMNDL+TP  +VFLA+                                                                             A D S V ++IL  VEAD+YWC+TKLLD IQDHY   QPGLQRM +RLQ +++R D  LH H + E + + QFAFRWMNCLL+REL L++I+R+WDT LAEE  GF+ FHVY+CAALL+ +SN L  + FQDL++FLQ+LPT DW +  IE LL QA +L+ L+ E
Sbjct:   32 ARATSSKDVLFDALLQAADLDLDKLRAASWTRVPDRVRGPVWQLLLGYLPTKRERRDATLRRKRQEYFDCLPMYYNNADAERSEEDQKMLRQILLDIPRTNPGMPLFHCDEVRRSLERMLYIWAIRHPASGYVQGMNDLVTPFYVVFLADH------------------------------------------------------------------LSDGEIKTINAYDASIVDSDILRAVEADSYWCLTKLLDGIQDHYTMLQPGLQRMFYRLQGIIQRIDQPLHDHLQNEHVDFNQFAFRWMNCLLVRELELNSIVRLWDTYLAEEREGFDSFHVYVCAALLVTWSNELQRMSFQDLLMFLQNLPTSDWDVVRIEELLGQAFILKTLFNE 358
[Close]
BLAST of NO08G03420 vs. NCBI_GenBank
Match: XP_008894548.1 (hypothetical protein PPTG_03624 [Phytophthora parasitica INRA-310] >XP_008894549.1 hypothetical protein, variant 1 [Phytophthora parasitica INRA-310] >ETK81125.1 hypothetical protein L915_13338 [Phytophthora parasitica] >ETK81126.1 hypothetical protein, variant 1 [Phytophthora parasitica] >ETL34539.1 hypothetical protein L916_13220 [Phytophthora parasitica] >ETL34540.1 hypothetical protein, variant 1 [Phytophthora parasitica] >ETL87800.1 hypothetical protein L917_13044 [Phytophthora parasitica] >ETL87801.1 hypothetical protein, variant 1 [Phytophthora parasitica] >ETN20669.1 hypothetical protein PPTG_03624 [Phytophthora parasitica INRA-310] >ETN20670.1 hypothetical protein, variant 1 [Phytophthora parasitica INRA-310])

HSP 1 Score: 368.2 bits (944), Expect = 6.300e-98
Identity = 192/385 (49.87%), Postives = 242/385 (62.86%), Query Frame = 0 
Query:  391 KFEELMAAEIVDLNKLREQSWGGIPDRYRGTIWRLLLGYLPANRDRREATLKRKRREYAEILPLYFNIAPEERTTQEQEILRQILVDLPRTQPEMPLFHQEETQRCMERVLYVWAIRHPASGYVQGMNDLITPLILVFLAEQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEAQALDVSKVSAEILEQVEADTYWCITKLLDNIQDHYIFSQPGLQRMTFRLQALVERHDPSLHRHF-EEEGLQYVQFAFRWMNCLLMRELSLDAIIRIWDTELAEETGGFEVFHVYLCAALLLRFSNHLSTLPFQDLVLFLQDLPTHDWTLHEIEPLLSQAHVLRALYPE 775
            +FE+L+  E+VDL++LR+ SWGGIP  YR T+WRLLLGY+P+ +DRR A L+RKR+EY E+L  Y+ I   +R T+EQ  LRQILVD+PRT  ++ LF  E   +CMERVLY+WAIRHPASGYVQG+NDL+TP ++VFL+                                                                           + Q  D+SKVS E L+ VEAD+YWC+TKLLD+IQDHY F+QPGLQRM  R++ LV R D  L  H  E E +Q+VQFAFRWMNCLLMREL LD I+RIWDT L E++ GFE FHVY+CAA+L+ F   L TL FQDLVLFLQ LPT DW  +EIEPLLS+A +L+  + +
Sbjct:  190 QFEQLLEKEVVDLDQLRKLSWGGIPTNYRPTVWRLLLGYMPSKKDRRAAMLERKRQEYVELLQQYYYIPDTDRGTREQTTLRQILVDIPRTNADVRLFQNERIHQCMERVLYIWAIRHPASGYVQGINDLMTPFLVVFLS-----------------------------------------------------------------------AFVDDPQRCDLSKVSDENLQIVEADSYWCLTKLLDDIQDHYTFAQPGLQRMVQRMEELVHRCDTELFEHIVERENVQFVQFAFRWMNCLLMRELPLDGIVRIWDTYLCEDS-GFESFHVYVCAAILMTFGEKLKTLEFQDLVLFLQSLPTKDWVENEIEPLLSRAFILQTYFAD 502
[Close]
BLAST of NO08G03420 vs. NCBI_GenBank
Match: XP_008894550.1 (hypothetical protein, variant 2 [Phytophthora parasitica INRA-310] >XP_008894551.1 hypothetical protein, variant 3 [Phytophthora parasitica INRA-310] >XP_008894552.1 hypothetical protein, variant 6 [Phytophthora parasitica INRA-310] >XP_008894553.1 hypothetical protein, variant 7 [Phytophthora parasitica INRA-310] >XP_008894554.1 hypothetical protein, variant 4 [Phytophthora parasitica INRA-310] >XP_008894555.1 hypothetical protein, variant 5 [Phytophthora parasitica INRA-310] >ETK81127.1 hypothetical protein, variant 2 [Phytophthora parasitica] >ETK81128.1 hypothetical protein, variant 3 [Phytophthora parasitica] >ETK81129.1 hypothetical protein, variant 4 [Phytophthora parasitica] >ETK81130.1 hypothetical protein, variant 5 [Phytophthora parasitica] >ETK81131.1 hypothetical protein, variant 6 [Phytophthora parasitica] >ETK81132.1 hypothetical protein, variant 7 [Phytophthora parasitica] >ETL34541.1 hypothetical protein, variant 2 [Phytophthora parasitica] >ETL34542.1 hypothetical protein, variant 3 [Phytophthora parasitica] >ETL34543.1 hypothetical protein, variant 4 [Phytophthora parasitica] >ETL34544.1 hypothetical protein, variant 5 [Phytophthora parasitica] >ETL34545.1 hypothetical protein, variant 6 [Phytophthora parasitica] >ETL34546.1 hypothetical protein, variant 7 [Phytophthora parasitica] >ETL87802.1 hypothetical protein, variant 2 [Phytophthora parasitica] >ETL87803.1 hypothetical protein, variant 3 [Phytophthora parasitica] >ETL87804.1 hypothetical protein, variant 4 [Phytophthora parasitica] >ETL87805.1 hypothetical protein, variant 5 [Phytophthora parasitica] >ETL87806.1 hypothetical protein, variant 6 [Phytophthora parasitica] >ETL87807.1 hypothetical protein, variant 7 [Phytophthora parasitica] >ETN20671.1 hypothetical protein, variant 2 [Phytophthora parasitica INRA-310] >ETN20672.1 hypothetical protein, variant 3 [Phytophthora parasitica INRA-310] >ETN20673.1 hypothetical protein, variant 4 [Phytophthora parasitica INRA-310] >ETN20674.1 hypothetical protein, variant 5 [Phytophthora parasitica INRA-310] >ETN20675.1 hypothetical protein, variant 6 [Phytophthora parasitica INRA-310] >ETN20676.1 hypothetical protein, variant 7 [Phytophthora parasitica INRA-310] >ETO69716.1 hypothetical protein, variant 2 [Phytophthora parasitica P1976] >ETO69717.1 hypothetical protein, variant 3 [Phytophthora parasitica P1976] >ETO69718.1 hypothetical protein, variant 4 [Phytophthora parasitica P1976] >ETO69719.1 hypothetical protein, variant 5 [Phytophthora parasitica P1976] >ETO69720.1 hypothetical protein, variant 6 [Phytophthora parasitica P1976] >ETO69721.1 hypothetical protein, variant 7 [Phytophthora parasitica P1976])

HSP 1 Score: 368.2 bits (944), Expect = 6.300e-98
Identity = 192/385 (49.87%), Postives = 242/385 (62.86%), Query Frame = 0 
Query:  391 KFEELMAAEIVDLNKLREQSWGGIPDRYRGTIWRLLLGYLPANRDRREATLKRKRREYAEILPLYFNIAPEERTTQEQEILRQILVDLPRTQPEMPLFHQEETQRCMERVLYVWAIRHPASGYVQGMNDLITPLILVFLAEQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEAQALDVSKVSAEILEQVEADTYWCITKLLDNIQDHYIFSQPGLQRMTFRLQALVERHDPSLHRHF-EEEGLQYVQFAFRWMNCLLMRELSLDAIIRIWDTELAEETGGFEVFHVYLCAALLLRFSNHLSTLPFQDLVLFLQDLPTHDWTLHEIEPLLSQAHVLRALYPE 775
            +FE+L+  E+VDL++LR+ SWGGIP  YR T+WRLLLGY+P+ +DRR A L+RKR+EY E+L  Y+ I   +R T+EQ  LRQILVD+PRT  ++ LF  E   +CMERVLY+WAIRHPASGYVQG+NDL+TP ++VFL+                                                                           + Q  D+SKVS E L+ VEAD+YWC+TKLLD+IQDHY F+QPGLQRM  R++ LV R D  L  H  E E +Q+VQFAFRWMNCLLMREL LD I+RIWDT L E++ GFE FHVY+CAA+L+ F   L TL FQDLVLFLQ LPT DW  +EIEPLLS+A +L+  + +
Sbjct:   91 QFEQLLEKEVVDLDQLRKLSWGGIPTNYRPTVWRLLLGYMPSKKDRRAAMLERKRQEYVELLQQYYYIPDTDRGTREQTTLRQILVDIPRTNADVRLFQNERIHQCMERVLYIWAIRHPASGYVQGINDLMTPFLVVFLS-----------------------------------------------------------------------AFVDDPQRCDLSKVSDENLQIVEADSYWCLTKLLDDIQDHYTFAQPGLQRMVQRMEELVHRCDTELFEHIVERENVQFVQFAFRWMNCLLMRELPLDGIVRIWDTYLCEDS-GFESFHVYVCAAILMTFGEKLKTLEFQDLVLFLQSLPTKDWVENEIEPLLSRAFILQTYFAD 403
[Close]
BLAST of NO08G03420 vs. NCBI_GenBank
Match: ETO69714.1 (hypothetical protein F444_13731 [Phytophthora parasitica P1976] >ETO69715.1 hypothetical protein, variant 1 [Phytophthora parasitica P1976])

HSP 1 Score: 368.2 bits (944), Expect = 6.300e-98
Identity = 192/385 (49.87%), Postives = 242/385 (62.86%), Query Frame = 0 
Query:  391 KFEELMAAEIVDLNKLREQSWGGIPDRYRGTIWRLLLGYLPANRDRREATLKRKRREYAEILPLYFNIAPEERTTQEQEILRQILVDLPRTQPEMPLFHQEETQRCMERVLYVWAIRHPASGYVQGMNDLITPLILVFLAEQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEAQALDVSKVSAEILEQVEADTYWCITKLLDNIQDHYIFSQPGLQRMTFRLQALVERHDPSLHRHF-EEEGLQYVQFAFRWMNCLLMRELSLDAIIRIWDTELAEETGGFEVFHVYLCAALLLRFSNHLSTLPFQDLVLFLQDLPTHDWTLHEIEPLLSQAHVLRALYPE 775
            +FE+L+  E+VDL++LR+ SWGGIP  YR T+WRLLLGY+P+ +DRR A L+RKR+EY E+L  Y+ I   +R T+EQ  LRQILVD+PRT  ++ LF  E   +CMERVLY+WAIRHPASGYVQG+NDL+TP ++VFL+                                                                           + Q  D+SKVS E L+ VEAD+YWC+TKLLD+IQDHY F+QPGLQRM  R++ LV R D  L  H  E E +Q+VQFAFRWMNCLLMREL LD I+RIWDT L E++ GFE FHVY+CAA+L+ F   L TL FQDLVLFLQ LPT DW  +EIEPLLS+A +L+  + +
Sbjct:  190 QFEQLLEKEVVDLDQLRKLSWGGIPTNYRPTVWRLLLGYMPSKKDRRAAMLERKRQEYVELLQQYYYIPDTDRGTREQTTLRQILVDIPRTNADVRLFQNERIHQCMERVLYIWAIRHPASGYVQGINDLMTPFLVVFLS-----------------------------------------------------------------------AFVDDPQRCDLSKVSDENLQIVEADSYWCLTKLLDDIQDHYTFAQPGLQRMVQRMEELVHRCDTELFEHIVERENVQFVQFAFRWMNCLLMRELPLDGIVRIWDTYLCEDS-GFESFHVYVCAAILMTFGEKLKTLEFQDLVLFLQSLPTKDWVENEIEPLLSRAFILQTYFAD 502
[Close]
BLAST of NO08G03420 vs. NCBI_GenBank
Match: XP_024576166.1 (gtpase-activating protein gyp1-like [Plasmopara halstedii] >CEG39797.1 gtpase-activating protein gyp1-like [Plasmopara halstedii])

HSP 1 Score: 367.5 bits (942), Expect = 1.100e-97
Identity = 191/385 (49.61%), Postives = 242/385 (62.86%), Query Frame = 0 
Query:  391 KFEELMAAEIVDLNKLREQSWGGIPDRYRGTIWRLLLGYLPANRDRREATLKRKRREYAEILPLYFNIAPEERTTQEQEILRQILVDLPRTQPEMPLFHQEETQRCMERVLYVWAIRHPASGYVQGMNDLITPLILVFLAEQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEAQALDVSKVSAEILEQVEADTYWCITKLLDNIQDHYIFSQPGLQRMTFRLQALVERHDPSLHRHF-EEEGLQYVQFAFRWMNCLLMRELSLDAIIRIWDTELAEETGGFEVFHVYLCAALLLRFSNHLSTLPFQDLVLFLQDLPTHDWTLHEIEPLLSQAHVLRALYPE 775
            +FE L+A E+VD+++LR+ SWGGIP  YR T+WRLLLGY+P+ +DRREA LKRKR+EY E+L  Y+ I   +R T+EQ  LRQILVD+PRT  ++ LF  E   + MERVLY+WAIRHPASGYVQG+NDL+TP ++VFL+                                                                           + Q  D+S VS E L+ +EAD+YWC+TKLLD+IQDHY F+QPGLQRM  R++ LV R D  L  H  E E +Q+VQFAFRWMNCLLMREL LD I+RIWDT L E++ GFE FHVY+CAA+L+ F + L TL FQDLVLFLQ LPT DW  +EIEPLLS+A +L+  + +
Sbjct:  171 QFERLLAKEVVDIDQLRKLSWGGIPTNYRPTVWRLLLGYMPSKKDRREAMLKRKRQEYVELLQQYYYIPDTDRGTREQTTLRQILVDIPRTNADVRLFQNERIHQSMERVLYIWAIRHPASGYVQGINDLMTPFLVVFLS-----------------------------------------------------------------------AFIDDPQMCDLSSVSDETLQIIEADSYWCLTKLLDDIQDHYTFAQPGLQRMVQRMEELVHRCDSDLFEHIVERENVQFVQFAFRWMNCLLMRELPLDGIVRIWDTYLCEDS-GFESFHVYVCAAILMTFGDKLKTLEFQDLVLFLQSLPTKDWVENEIEPLLSRAFILQTYFAD 483
[Close]
BLAST of NO08G03420 vs. NCBI_GenBank
Match: ETI41075.1 (hypothetical protein F443_13664 [Phytophthora parasitica P1569] >ETI41076.1 hypothetical protein, variant 1 [Phytophthora parasitica P1569] >ETP10813.1 hypothetical protein F441_13597 [Phytophthora parasitica CJ01A1] >ETP10814.1 hypothetical protein, variant 1 [Phytophthora parasitica CJ01A1] >ETP38954.1 hypothetical protein F442_13531 [Phytophthora parasitica P10297] >ETP38955.1 hypothetical protein, variant 1 [Phytophthora parasitica P10297])

HSP 1 Score: 366.3 bits (939), Expect = 2.400e-97
Identity = 191/385 (49.61%), Postives = 242/385 (62.86%), Query Frame = 0 
Query:  391 KFEELMAAEIVDLNKLREQSWGGIPDRYRGTIWRLLLGYLPANRDRREATLKRKRREYAEILPLYFNIAPEERTTQEQEILRQILVDLPRTQPEMPLFHQEETQRCMERVLYVWAIRHPASGYVQGMNDLITPLILVFLAEQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEAQALDVSKVSAEILEQVEADTYWCITKLLDNIQDHYIFSQPGLQRMTFRLQALVERHDPSLHRHF-EEEGLQYVQFAFRWMNCLLMRELSLDAIIRIWDTELAEETGGFEVFHVYLCAALLLRFSNHLSTLPFQDLVLFLQDLPTHDWTLHEIEPLLSQAHVLRALYPE 775
            +FE+L+  E+VDL++LR+ SWGGIP  YR T+WRLLLGY+P+ +DRR A L+RKR+EY E+L  Y+ I   +R T+EQ  LRQILVD+PRT  ++ LF  E   +CMERVLY+WAIRHPASGYVQG+NDL+TP ++VFL+                                                                           + Q  D+SKVS E L+ VEAD+YWC+TKLLD+IQDHY F+QPGLQRM  R++ LV R D  L  H  E E +Q+VQFAFRWMNCLLMREL LD I+RIWDT L E++ GFE FHVY+CAA+L+ F   L TL FQDLVLFLQ LPT +W  +EIEPLLS+A +L+  + +
Sbjct:  190 QFEQLLEKEVVDLDQLRKLSWGGIPTNYRPTVWRLLLGYMPSKKDRRAAMLERKRQEYVELLQQYYYIPDTDRGTREQTTLRQILVDIPRTNADVRLFQNERIHQCMERVLYIWAIRHPASGYVQGINDLMTPFLVVFLS-----------------------------------------------------------------------AFVDDPQRCDLSKVSDENLQIVEADSYWCLTKLLDDIQDHYTFAQPGLQRMVQRMEELVHRCDTELFEHIVERENVQFVQFAFRWMNCLLMRELPLDGIVRIWDTYLCEDS-GFESFHVYVCAAILMTFGEKLKTLEFQDLVLFLQSLPTKNWVENEIEPLLSRAFILQTYFAD 502
[Close]
BLAST of NO08G03420 vs. NCBI_GenBank
Match: ETI41077.1 (hypothetical protein, variant 2 [Phytophthora parasitica P1569] >ETI41078.1 hypothetical protein, variant 3 [Phytophthora parasitica P1569] >ETI41079.1 hypothetical protein, variant 4 [Phytophthora parasitica P1569] >ETI41080.1 hypothetical protein, variant 5 [Phytophthora parasitica P1569] >ETI41081.1 hypothetical protein, variant 6 [Phytophthora parasitica P1569] >ETI41082.1 hypothetical protein, variant 7 [Phytophthora parasitica P1569] >ETP10815.1 hypothetical protein, variant 2 [Phytophthora parasitica CJ01A1] >ETP10816.1 hypothetical protein, variant 3 [Phytophthora parasitica CJ01A1] >ETP10817.1 hypothetical protein, variant 4 [Phytophthora parasitica CJ01A1] >ETP10818.1 hypothetical protein, variant 5 [Phytophthora parasitica CJ01A1] >ETP10819.1 hypothetical protein, variant 6 [Phytophthora parasitica CJ01A1] >ETP10820.1 hypothetical protein, variant 7 [Phytophthora parasitica CJ01A1] >ETP38956.1 hypothetical protein, variant 2 [Phytophthora parasitica P10297] >ETP38957.1 hypothetical protein, variant 3 [Phytophthora parasitica P10297] >ETP38958.1 hypothetical protein, variant 4 [Phytophthora parasitica P10297] >ETP38959.1 hypothetical protein, variant 5 [Phytophthora parasitica P10297] >ETP38960.1 hypothetical protein, variant 6 [Phytophthora parasitica P10297] >ETP38961.1 hypothetical protein, variant 7 [Phytophthora parasitica P10297])

HSP 1 Score: 366.3 bits (939), Expect = 2.400e-97
Identity = 191/385 (49.61%), Postives = 242/385 (62.86%), Query Frame = 0 
Query:  391 KFEELMAAEIVDLNKLREQSWGGIPDRYRGTIWRLLLGYLPANRDRREATLKRKRREYAEILPLYFNIAPEERTTQEQEILRQILVDLPRTQPEMPLFHQEETQRCMERVLYVWAIRHPASGYVQGMNDLITPLILVFLAEQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEAQALDVSKVSAEILEQVEADTYWCITKLLDNIQDHYIFSQPGLQRMTFRLQALVERHDPSLHRHF-EEEGLQYVQFAFRWMNCLLMRELSLDAIIRIWDTELAEETGGFEVFHVYLCAALLLRFSNHLSTLPFQDLVLFLQDLPTHDWTLHEIEPLLSQAHVLRALYPE 775
            +FE+L+  E+VDL++LR+ SWGGIP  YR T+WRLLLGY+P+ +DRR A L+RKR+EY E+L  Y+ I   +R T+EQ  LRQILVD+PRT  ++ LF  E   +CMERVLY+WAIRHPASGYVQG+NDL+TP ++VFL+                                                                           + Q  D+SKVS E L+ VEAD+YWC+TKLLD+IQDHY F+QPGLQRM  R++ LV R D  L  H  E E +Q+VQFAFRWMNCLLMREL LD I+RIWDT L E++ GFE FHVY+CAA+L+ F   L TL FQDLVLFLQ LPT +W  +EIEPLLS+A +L+  + +
Sbjct:   91 QFEQLLEKEVVDLDQLRKLSWGGIPTNYRPTVWRLLLGYMPSKKDRRAAMLERKRQEYVELLQQYYYIPDTDRGTREQTTLRQILVDIPRTNADVRLFQNERIHQCMERVLYIWAIRHPASGYVQGINDLMTPFLVVFLS-----------------------------------------------------------------------AFVDDPQRCDLSKVSDENLQIVEADSYWCLTKLLDDIQDHYTFAQPGLQRMVQRMEELVHRCDTELFEHIVERENVQFVQFAFRWMNCLLMRELPLDGIVRIWDTYLCEDS-GFESFHVYVCAAILMTFGEKLKTLEFQDLVLFLQSLPTKNWVENEIEPLLSRAFILQTYFAD 403
[Close]
BLAST of NO08G03420 vs. NCBI_GenBank
Match: KUG00451.1 (TBC1 domain family member 22B [Phytophthora nicotianae])

HSP 1 Score: 365.5 bits (937), Expect = 4.100e-97
Identity = 191/385 (49.61%), Postives = 241/385 (62.60%), Query Frame = 0 
Query:  391 KFEELMAAEIVDLNKLREQSWGGIPDRYRGTIWRLLLGYLPANRDRREATLKRKRREYAEILPLYFNIAPEERTTQEQEILRQILVDLPRTQPEMPLFHQEETQRCMERVLYVWAIRHPASGYVQGMNDLITPLILVFLAEQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEAQALDVSKVSAEILEQVEADTYWCITKLLDNIQDHYIFSQPGLQRMTFRLQALVERHDPSLHRHF-EEEGLQYVQFAFRWMNCLLMRELSLDAIIRIWDTELAEETGGFEVFHVYLCAALLLRFSNHLSTLPFQDLVLFLQDLPTHDWTLHEIEPLLSQAHVLRALYPE 775
            +FE+L+  E+VDL++LR+ SWGGIP  YR T+WRLLLGY+P+ +DRR A L+RKR+EY E+L  Y+ I   +R T+EQ  LRQILVD+PRT  ++ LF  E   +CMERVLY+WAIRHPASGYVQG+NDL+TP ++VFL+                                                                           + Q  D+SKVS E L+ VEAD+YWC+TKLLD+IQDHY F+QPGLQRM  R++ LV R D  L  H  E E +Q+VQFAFRWMNCLLMREL LD I+RIWDT L E++ GFE FHVY+CAA+L+ F   L TL FQDLVLFLQ LPT  W  +EIEPLLS+A +L+  + +
Sbjct:  124 QFEQLLEKEVVDLDQLRKLSWGGIPTNYRPTVWRLLLGYMPSKKDRRAAMLERKRQEYVELLQQYYYIPDTDRGTREQTTLRQILVDIPRTNADVRLFQNERIHQCMERVLYIWAIRHPASGYVQGINDLMTPFLVVFLS-----------------------------------------------------------------------AFVDDPQRCDLSKVSDENLQIVEADSYWCLTKLLDDIQDHYTFAQPGLQRMVQRMEELVHRCDTELFEHIVERENVQFVQFAFRWMNCLLMRELPLDGIVRIWDTYLCEDS-GFESFHVYVCAAILMTFGEKLKTLEFQDLVLFLQSLPTKXWVENEIEPLLSRAFILQTYFAD 436
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BLAST of NO08G03420 vs. NCBI_GenBank
Match: ETM41045.1 (hypothetical protein L914_13132 [Phytophthora parasitica] >ETM41046.1 hypothetical protein, variant 1 [Phytophthora parasitica])

HSP 1 Score: 364.8 bits (935), Expect = 7.000e-97
Identity = 191/385 (49.61%), Postives = 241/385 (62.60%), Query Frame = 0 
Query:  391 KFEELMAAEIVDLNKLREQSWGGIPDRYRGTIWRLLLGYLPANRDRREATLKRKRREYAEILPLYFNIAPEERTTQEQEILRQILVDLPRTQPEMPLFHQEETQRCMERVLYVWAIRHPASGYVQGMNDLITPLILVFLAEQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEAQALDVSKVSAEILEQVEADTYWCITKLLDNIQDHYIFSQPGLQRMTFRLQALVERHDPSLHRHF-EEEGLQYVQFAFRWMNCLLMRELSLDAIIRIWDTELAEETGGFEVFHVYLCAALLLRFSNHLSTLPFQDLVLFLQDLPTHDWTLHEIEPLLSQAHVLRALYPE 775
            +FE L+  E+VDL++LR+ SWGGIP  YR T+WRLLLGY+P+ +DRR A L+RKR+EY E+L  Y+ I   +R T+EQ  LRQILVD+PRT  ++ LF  E   +CMERVLY+WAIRHPASGYVQG+NDL+TP ++VFL+                                                                           + Q  D+SKVS E L+ VEAD+YWC+TKLLD+IQDHY F+QPGLQRM  R++ LV R D  L  H  E E +Q+VQFAFRWMNCLLMREL LD I+RIWDT L E++ GFE FHVY+CAA+L+ F   L TL FQDLVLFLQ LPT +W  +EIEPLLS+A +L+  + +
Sbjct:  190 QFEVLLEKEVVDLDQLRKLSWGGIPTNYRPTVWRLLLGYMPSKKDRRAAMLERKRQEYVELLQQYYYIPDTDRGTREQTTLRQILVDIPRTNADVRLFQNERIHQCMERVLYIWAIRHPASGYVQGINDLMTPFLVVFLS-----------------------------------------------------------------------AFVDDPQRCDLSKVSDENLQIVEADSYWCLTKLLDDIQDHYTFAQPGLQRMVQRMEELVHRCDTELFEHIVERENVQFVQFAFRWMNCLLMRELPLDGIVRIWDTYLCEDS-GFESFHVYVCAAILMTFGEKLKTLEFQDLVLFLQSLPTKNWVENEIEPLLSRAFILQTYFAD 502
The following BLAST results are available for this feature:
BLAST of NO08G03420 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM26781.11.500e-16048.24gtpase activating protein [Nannochloropsis gaditan... [more]
GBG32797.12.800e-9847.58TBC1 domain family member 22B [Aurantiochytrium sp... [more]
XP_008894548.16.300e-9849.87hypothetical protein PPTG_03624 [Phytophthora para... [more]
XP_008894550.16.300e-9849.87hypothetical protein, variant 2 [Phytophthora para... [more]
ETO69714.16.300e-9849.87hypothetical protein F444_13731 [Phytophthora para... [more]
XP_024576166.11.100e-9749.61gtpase-activating protein gyp1-like [Plasmopara ha... [more]
ETI41075.12.400e-9749.61hypothetical protein F443_13664 [Phytophthora para... [more]
ETI41077.12.400e-9749.61hypothetical protein, variant 2 [Phytophthora para... [more]
KUG00451.14.100e-9749.61TBC1 domain family member 22B [Phytophthora nicoti... [more]
ETM41045.17.000e-9749.61hypothetical protein L914_13132 [Phytophthora para... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL109nonsL109Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR083ncniR083Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR141ngnoR141Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK008673NSK008673Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO08G03420.1NO08G03420.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|622871gene_3673Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100018g31gene3726Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO08G03420.1NO08G03420.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO08G03420 ID=NO08G03420|Name=NO08G03420|organism=Nannochloropsis oceanica|type=gene|length=3467bp
CAATACTTTGCATAGCTTCATTCTTTCGCTAGCCCTCGACCCTTCCCCAA
CGAAGAACACTCGCCGAATGTGTGCTTGAAGCAGAGAAATCACACCCGGC
AGAAGCAAGGGACCTCAAGAATAAATAGACTATCGTTTACTCAGCGCTTA
GCTCACCTCATACCAACCCTCCACCACCACCGACTCCTCATACAGGAGTA
GGACCCGCGAATAAGGAGCGATCGGGTAAACTTGCAGCATCTGGCCACGA
GAACAGACACAGCCATTGCCTCCAGCGACGGGCCGTTGGGCAGCGAGGAG
GCAAGGCATGAGTGAAAGGgtaagtgtttaaggcctcgtttctccgtcag
tgcccctctcttgcgtctcccacatcaaatcttcatccatgatattcaca
tatccttatcgaagCTCTCCGAAAGTGGCAGCAGTAGAGAAAGCACTGCC
AGCAACCCCTTCGACCCTTCGAAGCCGCAGCAGCTACCGCCCGCACGGAC
GACCCCCAACATCTTCCAGCGCCTGCAGCTAGGCAAGCCCAAGAGTCGGC
GCACTTTACGCCCCGCCTCCTCTACTTCAGCCCCAAGGTGCATCAAGAAG
GAGGAAGAAGAGGAGAAGACAAAGCAGGAGATCACCGCCAACAGCAGCAG
CAGCAGCAGCAGCAGCAGCATCACCACCACCACCATTGATGCCTGGGTGG
GGATCGGCAGCAGCGGAAGCGGGACGTCGCAAAGGATAAGCAGCAGCACC
TTTGGACATAGCATGAGTCTGGGCATGAGCAGCGGCCTCAGCAGCACTAT
CATCGGGCAACCACCACGCCCCAGTAGCAACAGCAACGCCGTGCCGGGTC
ACCTCAAGATGAAGGCCCGACCTATCCCTCTGCCCTCTTCTCCATCCTCC
CTTCCCCCTCCGTCCAAATCGGTAGGTGGCGCCTCGATACACGGGACAGG
CAGCGGTGACCCTACTCCATCAAAGCCACGCTCTTCGCACCAAGCCATGC
TGGGAGGGACGGTCTCGAAGCTTAACGCACACTTGTCGCCGACCCGGGGA
ATCAGCCGAGGAGACGGAGGAGGCGGAGAAGGAGGGAGGGGAAGAGCAAA
TGTGCAAGTCAGTAGTGATATTGCAGGTGGGGGGTTGGAAACGGGCATCC
TGGGCATTGATTTGACGTCGGATGACGAGGCAGTGTACCATCAGCAAGAA
CAACAGCAGCAACAAAGGCAGCAGCAACGAGAGCACCAGCAGCAGCAGCC
AAGGAAGGGGAGCGGCCGTGAGCTACAGCACGAGGACATGTGGGATTTCA
TATCACCAGATGAGGATAGCTCAGCGAGCACCCTTCAGCAAGAGCAACAA
CACAGCAGCGGAAACAGCAACAGGACAAGCAGCAAGAGCAAAGACAGTGG
TTCCGCTGGGCGACGACGCGGCCTGGGCGACTTTCTCGTCAAGCTTGGAA
GAGGTGGTAACATCGGAGGAGGAGGTGGAGGAGAAAACAAGCCCCAGAGC
CTCTACCCCACTACCACTGCCGTCGCTGCCGCAGCCGCTGTTGAAGCCAC
GGCCAAGTCGTACACGGAGCGGAAATTCGAAGAGCTCATGGCCGCAGAAA
TTGTGGATCTGAACAAGCTACGAGAGCAGAGTTGGGGAGGCATTCCGGAT
CGGTATCGAGGGACGATCTGGCGATTGCTGTTGGGCTATTTACCTGCCAA
TCGCGATAGAAGGGAGGCGACGCTGAAGAGGAAACGGAGGGAGTATGCAG
AGATATTGCCCTTGTATTTTAATATTGCCCCGGAGGAGAGGACGACGCAG
GAACAGGAGATATTGAGGCAGATTTTGGTGGATTTGCCGAGAACACAGCC
AGAAATGCCATTGTTCCACCAGGAGGAAACGCAGAGATGCATGGAGAGGG
TGTTGTATGTGTGGGCGATTCGACATCCGGCTAGCGGATATGTACAGGGG
ATGAATGACCTGATCACACCCTTGATCTTGGTGTTTTTGGCAGAGCAGCT
GATGCATCCACCGGCCTCGTCGTCTTCCTCGTCCTCCACGCCATCGTCCC
CGTCCTCCTCCTCTTCCTCCTCATTGGAGCGTGGCTCACCCGCCGCAGAA
TCATCCTACCTCTCCTCCTCCATCTCCACCTCCCACCACGCCCCCACTTC
CTTCATCTCCCCCTCCTCCTCAACCCCACGCCGCAGCGGTCGGACCGCCA
GCGGTGCTGCCGCCGCGGAAGCGCAAGCGCTGGACGTGTCAAAAGTGTCA
GCTGAAATCCTAGAGCAAGTAGAAGCAGATACTTATTGGTGCATCACCAA
GCTATTGGATAACATTCAGGACCATTACATTTTCAGCCAACCGGGCTTAC
AACGGATGACTTTTCGATTGCAGGCGCTTGTGGAACGCCATGACCCCTCC
CTGCACCGACACTTCGAGGAGGAGGGGCTGCAGTATGTGCAGTTCGCGTT
CCGGTGGATGAATTGTTTGTTGATGCGCGAGTTGTCTTTGGATGCAATTA
TAAGAATATGGGACACGGAGTTGGCCGAAGAAACGGGGGGATTTGAGGTC
TTTCATGTATACTTATGCGCTGCCTTACTGCTTCGGTTTTCCAATCACTT
GAGCACGCTACCTTTTCAGGACTTGGTTTTGTTTTTGCAGGACCTGCCAA
CGCATGACTGGACATTGCATGAGATTGAGCCATTGTTGTCGCAGGCTCAC
GTGCTTCGGGCGCTTTACCCTGAGTTTGGGCAGCCGGGGGGGGCAAGGGT
GTTGCCGCCTGTAGGGGGGGGAGGAAGGAGAGAACGAGGAAGGTAGGGGA
GAGGGAGGGGGGGAGGGAGGAAAGGAAAGAGAAAAAGAATATAGTGGAGT
TAGATCGTAAACTGTTCGCAATAGGCAAACAAATGAAGTACCACAATCCC
AAAAGTATTTGCGTGATTCGCGATGAGCACGTATGCTCCGTCGATTCCTT
CCCTTTGGAGTTTGATCACACATTCTCTCATGGCCAATTTTTCTATCATT
TCGTTTTTACAGCTTTATTCATATGTTACCCTTCTTGTCTTTTTTTTGGC
GCCCTCAGCTGTACCGCCACATTCCTTCTGCCTTCTCCTCGGTGTCAAAT
AGTTGTTTGGAGGGTGTGCCAGCTCGGATGGGGCCCCAGTCACGGTTCCG
GGCTGCAGGCGTCGATATTGAGAACTGGCCATAAGTGAAATCGATAGAAT
CGTAGAAAGTGAGGAGTGAATGGATGGATGAGTGAGTAGAGGGTCGACGA
GTGCATCATTCCAAGCTAGGCCATTGGAACATACAGGAAGAAGACTCCGT
CGTCAACAAATGCTCACGAGTAAGTAAGTGACCATCATACACTGCTTATG
ATGAAGTGCGGCGCACATACACACGTGAATTCATACATGAAAACGCACCC
AAACATCCACCCACAACCACGTACAAGAACAACGCAGCAGCCGGGGGGGT
GATAAGCAATCAATCGG
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protein sequence of NO08G03420.1

>NO08G03420.1-protein ID=NO08G03420.1-protein|Name=NO08G03420.1|organism=Nannochloropsis oceanica|type=polypeptide|length=798bp
MSERLSESGSSRESTASNPFDPSKPQQLPPARTTPNIFQRLQLGKPKSRR
TLRPASSTSAPRCIKKEEEEEKTKQEITANSSSSSSSSSITTTTIDAWVG
IGSSGSGTSQRISSSTFGHSMSLGMSSGLSSTIIGQPPRPSSNSNAVPGH
LKMKARPIPLPSSPSSLPPPSKSVGGASIHGTGSGDPTPSKPRSSHQAML
GGTVSKLNAHLSPTRGISRGDGGGGEGGRGRANVQVSSDIAGGGLETGIL
GIDLTSDDEAVYHQQEQQQQQRQQQREHQQQQPRKGSGRELQHEDMWDFI
SPDEDSSASTLQQEQQHSSGNSNRTSSKSKDSGSAGRRRGLGDFLVKLGR
GGNIGGGGGGENKPQSLYPTTTAVAAAAAVEATAKSYTERKFEELMAAEI
VDLNKLREQSWGGIPDRYRGTIWRLLLGYLPANRDRREATLKRKRREYAE
ILPLYFNIAPEERTTQEQEILRQILVDLPRTQPEMPLFHQEETQRCMERV
LYVWAIRHPASGYVQGMNDLITPLILVFLAEQLMHPPASSSSSSSTPSSP
SSSSSSSLERGSPAAESSYLSSSISTSHHAPTSFISPSSSTPRRSGRTAS
GAAAAEAQALDVSKVSAEILEQVEADTYWCITKLLDNIQDHYIFSQPGLQ
RMTFRLQALVERHDPSLHRHFEEEGLQYVQFAFRWMNCLLMRELSLDAII
RIWDTELAEETGGFEVFHVYLCAALLLRFSNHLSTLPFQDLVLFLQDLPT
HDWTLHEIEPLLSQAHVLRALYPEFGQPGGARVLPPVGGGGRRERGR*
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Synonyms
Publications