NO08G03360, NO08G03360 (gene) Nannochloropsis oceanica

Overview
NameNO08G03360
Unique NameNO08G03360
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length3883
Alignment locationchr8:928707..932589 -

Link to JBrowse

Properties
Property NameValue
DescriptionUbiquitin-associated/translation elongation factor EF1B
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr8genomechr8:928707..932589 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO:0003746translation elongation factor activity
Vocabulary: INTERPRO
TermDefinition
IPR029071Ubiquitin-rel_dom
IPR009060UBA-like
IPR036339PUB-like_dom_sf
IPR000626Ubiquitin-like
IPR013536WLM
IPR018997PUB_domain
IPR015940UBA/transl_elong_EF1B_N_euk
Vocabulary: Biological Process
TermDefinition
GO:0006414translational elongation
Homology
BLAST of NO08G03360 vs. NCBI_GenBank
Match: EWM26815.1 (Ubiquitin-associated/translation elongation factor EF1B [Nannochloropsis gaditana])

HSP 1 Score: 507.3 bits (1305), Expect = 7.500e-140
Identity = 311/682 (45.60%), Postives = 404/682 (59.24%), Query Frame = 0
Query:    7 AAAKHLSLDLSFKNQHHVVTMPASTPLTDIQAMAEAKTGIALIHQKLIHKGKTLTDSTITLGQLGRGTDTVKLVLIGTSAAALSALADGPKLVGDVRIINDLGSTGGSDRGI------APILRSRRHGFQRVDVLPHLPEQDIARRILTELASDPGVLHVMEKYQWSVGALCEMYPEGLVGVSTVCVMGLNENKGQRILLRLRTDDLQGWRKILSIRKVLYHEMAHNVHSDHDDQFHILMRTIEREVNAFNQSGRVIGGSTYIQAASTSCGPAAFAGGFGRLGGASADLTQMLPARVMAGHAALKRLSEEEKEIEEACASGRHAAPTLPALPTPSQEVDNDSSCYSSSNYMVEXXXXXXXXXXXXXXXXXXXXELQVVEPPMPQATEEELRGLEKSSSVAIAPSTAPASPTAQAPPTLLSAIPWAETTPPPSVQNGKEITPAFSRQPPSSTSRPEEAVASISASVEKADLFPLAPPPDEITTSSIVAPPTADAAIHDATEQLLGLGFAEIEVRRALQESGGDVMQAADYLL-MSAEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGDSALSHPFNSRQARVMDAVQRLAQQTRGDREVAALAFTTLHSMLQSLLDHPQEPKYKRVRLTNVKFQRALGRLMPAMDLLRAVGFEERDGGAVLEYTRNDPGLLWWGKSAMEGVQD 682
            A    + ++LSFK Q  ++ +PAST L D+QA+AE KTGI   HQK+I KGK LTD +ITLGQL    + +KLVLIGT+ A+L+ALA+ P  + ++RIINDLG  G    GI      AP+LR R++GFQ ++VLPHLP+QD+ARRILT+LASDPGVL VME+Y+WSVGALCEMYPEGLVGVS+VCVMGLNENKGQRI LRLRTDDL GWRK LS+RKVL+HE+AHNVH+ HD  FH+LMR IER+VNAFN SGR +GG+ ++ A         F GG GRLGG  A  +    ARVMAG AA++RLS+EE+ I++AC SGR +        T   E D+D+   S    +                                QA E+     EK    + +P +            L++ +P       PS        P + + P  + S  + +V     S+  + L  +        + S     + D  + +A  QL+GLGF E +V  AL    GD+M+AADYLL ++A                                   + P +SRQARVM+A QRLA++     E +  AF TL SMLQ+LL+HPQE K++RVRL N KFQR +GR   A+DLLR VGF+ER+GG VLEYTR DPGLLWWGK  +E  ++
Sbjct:    8 AETNSVEVNLSFKGQQDLLHLPASTTLADVQALAETKTGIHPAHQKIICKGKKLTDPSITLGQLRADVEVIKLVLIGTTTASLAALAEAPARLNNIRIINDLG--GNMSGGIKISTVAAPVLRPRKYGFQSIEVLPHLPDQDMARRILTDLASDPGVLLVMERYKWSVGALCEMYPEGLVGVSSVCVMGLNENKGQRIFLRLRTDDLLGWRKALSVRKVLFHELAHNVHAAHDQPFHLLMRNIERDVNAFNSSGRAVGGALHLPAEGGGMPGGLFEGGSGRLGGRGASTS----ARVMAGLAAIQRLSKEEQAIDDACGSGRQSGTMGLTGVTRPSERDSDNPNRSIKATL--------------------------------QAQEDAAHTEEKGEKDSKSPDS-----------ELVTVLP----AEDPSRSGRTASGPGYDQLPSPTPSPLKPSVPENPGSLGDSSLDEMRESALHFHSHSAGCCSSTD-RMDEAAAQLMGLGFGEAQVLEALHLYDGDLMRAADYLLELAAREERAGEGEGQIVGASSANLSDPSPRPPAAAIDTPTIPSDSRQARVMEAAQRLAREA---SEGSNAAFATLQSMLQALLEHPQELKFRRVRLNNAKFQRTVGRFPAAIDLLRDVGFQEREGGTVLEYTRGDPGLLWWGKCVVEQAKE 632          
BLAST of NO08G03360 vs. NCBI_GenBank
Match: CBJ49209.1 (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 251.5 bits (641), Expect = 7.400e-63
Identity = 224/721 (31.07%), Postives = 323/721 (44.80%), Query Frame = 0
Query:   12 LSLDLSFKNQHHVVT-MPASTPLTDIQAMAEAKTGIALIHQKLIHKGKTLTDSTITLGQLG---------------------RGTDTV---KLVLIGTSAAALSALADGPKLVGDVRIINDLGSTGGSDRGIAPILRSRRHG--------FQRVDVLPHLPEQDIARRILTELASDPGVLHVMEKYQWSVGALCEMYPEGLVGVSTVCVMGLNENKGQRILLRLRTDDLQGWRKILSIRKVLYHEMAHNVHSDHDDQFHILMRTIEREVNAFN----QSGRVIGGSTYIQAASTSCGPA----------AFAGGFGRLGGASADLTQMLPARVMAGHAALKRLSEEEKEIEEACASGRHAAPTLPALPTPSQEVDNDSSCYSSSNYMVEXXXXXXXXXXXXXXXXXXXXELQVVEPPMPQATEEELRGLEKSSSVAIAPSTAPASPTAQAPPTLLSAIPWAETTPPPSVQNGKEITPAFSRQPPSSTSRPEEAVASISASVEKADLFPLAPPPDEITTSSIVAPPTADAAIHDATEQLLGLGFAEIEVRRALQESGGDVMQAADYLL---MSAEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGDSALSHPFNSRQARVMDAVQRLAQQTRGDREVAALAFTTLHSMLQSLLDHPQEPKYKRVRLTNVKFQRALGRLMPAMDLLRAVGFEERDGGAVLEYTRNDPGLLWWGKSAMEGVQDQ 683
            + L +SF+ +   VT +  +T + +++   E  T + + +QKLI KGK L D   TL   G                     +G   V   KL+L+G+  + +  +    +    VR+ NDL     + +G   +  +   G        F+R++ LP LPE++ AR+IL  LA+DPGV  V+EK++W+VGALCE+YPEG VGVS  CV+GLN+N G +I LRLRTDDL+G+RKILSIRKVL+HE+AHN  SDHDD F++LMR +ERE    N      GR + G      A  +  P           AF GG GRLGG S   T++  A  MAG AA++RL+ EE+E+E+ C   +  A     +    +  + ++   S S   V                XXXXX              EE R  E+   +  A     A          +S  P    +PP                                          L P P    +SS+              ++LL +GF       AL  SGG +  AA  LL   M                                 + A+  P   R  R+  A  R+A     DR  A      L ++L+++++HP+E K+++VR +N KF+ ++G +   +DLL A GFEER G   LE  R DPGL+W  KS +E  Q++
Sbjct:    1 MELQVSFRGEPLTVTGVDHATAVENLKNKLEELTAVPVANQKLILKGKALRDEAGTLEAAGVLVPSPAQTATTTTATERHEEKGDTFVQKSKLMLVGSKPSEVEEVL---REQDRVRVRNDLNGQ-VTPKGYKKVALNYPPGPSDLSPYRFERIETLPGLPEEETARKILESLAADPGVRAVLEKHRWTVGALCELYPEGKVGVSDKCVLGLNQNHGMKIFLRLRTDDLRGFRKILSIRKVLFHELAHNDISDHDDNFYMLMRQVEREAAELNWMQQSGGRTVAGRPPAPRAEPAGLPGGGEGFILVKEAFEGGSGRLGGDSNAFTKIFSAGEMAGQAAVQRLTPEEQEVEDCCGHTKGVAAGAAEVEKEERLAETNAMASSVSEMSVTSDDLDDGVAPALTSAXXXXXXXXXXXXXXXXXXGEE-RQAERGQRLTGASEMNVAEEEGDG----ISVEP--VDSPPLEAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKLGPAPRTPESSSL--------------DELLAMGFPREAAVEALSASGGSIPDAAYRLLTPGMMESGRNNSSEAVGMTAAGGGAQGSREAGRDTGSEGAVRLP---RDVRLQQAADRVA--GHADRARAVQCLDVLAAVLRNIMEHPEEAKFRKVRRSNGKFKASVGAVAGGVDLLLAAGFEER-GDDQLELGRQDPGLIWLAKSTVEAWQER 690          
BLAST of NO08G03360 vs. NCBI_GenBank
Match: XP_008618402.1 (hypothetical protein SDRG_14076 [Saprolegnia diclina VS20] >EQC28253.1 hypothetical protein SDRG_14076 [Saprolegnia diclina VS20])

HSP 1 Score: 184.9 bits (468), Expect = 8.500e-43
Identity = 130/331 (39.27%), Postives = 183/331 (55.29%), Query Frame = 0
Query:   16 LSFKNQHHVVTMPA---STPLTDIQAMAEAKTGIALIHQKLIHKGKTLTDSTITLGQLGRGTDTVKLVLIGTSAAALSALAD---GPKLVGDVRIINDLGSTGGSDRGIAPILRSRRHG-----FQRVDVLPHLPEQDIARRILTELASDPGVLHVMEKYQWSVGALCEMYPEGLVGVSTVCVMGLNENKGQRILLRLRTDDLQGWRKILSIRKVLYHEMAHNVHSDHDDQFHILMRTIEREVNAFNQSGRVIGGSTYIQAASTSCGPAAFAGGFGRLGGASADLTQMLPARVMAGHAALKRLSEEEKEIEEACASGRHAAPTLPALPTPS 336
            L  K+   V+++P     + + +++   EA T   +  Q+LI KGK L D  + +   GR      ++L+  SA A++A+ +     K + + R    L S    +     +L +R H      F  +  LP LP++  AR ILT LA D G+LHVM K++W+VGAL EM+P+G VGV  VCV+GLNENKGQRILLRLRTDDLQG+RK L+I+KVLYHE+ HN  SDH+++F+ LMR +E E N       V G +T IQ  +TS   AA     G    A+ D  Q+   R +    A +    E  +I  +  S     P LP  PTP+
Sbjct:    4 LRVKHAERVLSLPLGADGSSVAELKKQIEALTHAPVDQQRLIVKGKVLADDDVVVDD-GR----TAVLLVRPSAEAIAAMNEQEAALKKIEETRASRSLVSIQAKNE----VLSARAHAALAYRFHEIQTLPGLPDEAKARAILTSLAQDKGILHVMAKHKWTVGALAEMFPDGKVGVDPVCVLGLNENKGQRILLRLRTDDLQGFRKYLTIKKVLYHELTHNDVSDHNNEFYQLMRQVEAECNT------VPGTTTSIQVPTTSPTHAARGHVLGGSTPAAIDSRQLRAERALERFTAPQSAPAEAVDIVISLPSILENVP-LPR-PTPA 317          
BLAST of NO08G03360 vs. NCBI_GenBank
Match: XP_012204418.1 (hypothetical protein SPRG_09603 [Saprolegnia parasitica CBS 223.65] >KDO24959.1 hypothetical protein SPRG_09603 [Saprolegnia parasitica CBS 223.65])

HSP 1 Score: 180.3 bits (456), Expect = 2.100e-41
Identity = 125/327 (38.23%), Postives = 179/327 (54.74%), Query Frame = 0
Query:   16 LSFKNQHHVVTMPA---STPLTDIQAMAEAKTGIALIHQKLIHKGKTLTDSTITLGQLGRGTDTVKLVLIGTSAAALSALAD---GPKLVGDVRIINDLGSTGGSDRGI-APILRSRRHGFQRVDVLPHLPEQDIARRILTELASDPGVLHVMEKYQWSVGALCEMYPEGLVGVSTVCVMGLNENKGQRILLRLRTDDLQGWRKILSIRKVLYHEMAHNVHSDHDDQFHILMRTIEREVNAFNQSGRVIGGSTYIQAASTSCGPAAFAGGFGRLGGASADLTQMLPARVMAGHAALKRLSEEEKEIEEACASGRHAAPTLPALPTPS 336
            L  K+   V+++P     + + +++   EA T   +  Q+LI KGK L D  +     GR      ++L+  SA A++A+ +     K + + R    + S    +  + A    +R + F  +  LP LP++  A  ILT LA D G+LHVM K++WSVGAL EMYP+G VGV  VCV+GLNENKGQRILLRLRTDDLQG+RK L+I+KVLYHE+ HN  SDH+++F+ LMR +E E N       V G +T + A +TS  P   A G   LGG+       +P  +      ++R  E    ++       H   T P  P P+
Sbjct:    4 LRVKHAERVLSLPLGADGSSVAELKKQLEALTHAPVDQQRLIVKGKVLADDAVVADD-GR----TAVLLVRPSADAIAAMNEQEAALKKLEETRASRPIVSIQAKNEVLSARAHAARAYRFHEIQTLPGLPDEARATAILTSLAQDKGILHVMAKHKWSVGALAEMYPDGKVGVDPVCVLGLNENKGQRILLRLRTDDLQGFRKYLTIKKVLYHELTHNDVSDHNNEFYQLMRQVEAECNT------VPGTTTSLDAPTTS--PTVAARGH-VLGGS-------IPVAIEPRQLRVERALERFTALQSTPIEAAHHV-TSPLSPAPA 308          
BLAST of NO08G03360 vs. NCBI_GenBank
Match: XP_009525314.1 (hypothetical protein PHYSODRAFT_249618 [Phytophthora sojae] >EGZ22597.1 hypothetical protein PHYSODRAFT_249618 [Phytophthora sojae])

HSP 1 Score: 177.2 bits (448), Expect = 1.800e-40
Identity = 114/295 (38.64%), Postives = 172/295 (58.31%), Query Frame = 0
Query:   13 SLDLSFKNQHHVVTMPASTP-LTDIQAMAEAKTGIALIHQKLIHKGKTL--TDSTITL-GQLGRGTDTVKLVLI-GTSAAALSALADGPKLV------GDVRIINDLGSTGGSDRGIAPILRSRRHGFQRVDVLPHLPEQDIARRILTELASDPGVLHVMEKYQWSVGALCEMYPEGLVGVSTVCVMGLNENKGQRILLRLRTDDLQGWRKILSIRKVLYHEMAHNVHSDHDDQFHILMRTIEREVNAF---NQSGRVIGGSTYIQAASTSCGPAAFAGGFGRLGGASADLTQML 294
            +L++ FK Q H +T+P+ +P ++D+Q   E  TG+    Q+L  K + +  +D+   L G      D   L+L+ G SAA +  +      V       + R + D+       +    +  S R  F  ++ L +  ++  A+ IL +LA+D G+L VM K++WSVG L EM P+G VGV  VCV+GLN+NKGQ+ILLRLRTDDL G+RK LSI+KVL+HE++HNVHS+HD +F+ LMR IE E N     +  G  +GGS  +    ++    + +G   RLGG SA  +++L
Sbjct:    3 TLNVQFKGQTHSLTLPSGSPTVSDLQEAIERATGVQQDAQRLFQKRRRVDCSDAARALAGVCNCSQDAAPLMLMAGASAAQIEDMKSTQNAVQKETRIRENRRVVDISKRNQGLQARDAVATSYR--FHAIEPLQNFADKHKAQEILEKLANDRGILAVMAKHKWSVGVLAEMPPDGKVGVDPVCVLGLNQNKGQKILLRLRTDDLLGFRKFLSIKKVLFHELSHNVHSEHDSKFYQLMRQIENECNELDWTSSGGAAVGGSQAMPHNESNSDSGSTSG--HRLGGGSAGTSRLL 293          
BLAST of NO08G03360 vs. NCBI_GenBank
Match: OQR88122.1 (hypothetical protein ACHHYP_07547 [Achlya hypogyna])

HSP 1 Score: 174.5 bits (441), Expect = 1.200e-39
Identity = 120/294 (40.82%), Postives = 166/294 (56.46%), Query Frame = 0
Query:   28 PASTPLTDIQAMAEAKTGIALIHQKLIHKGKTLTDSTITLGQLGRGTDTVKLVLIGTSAAALSALADGPKLVGDVRIINDLGSTGGSDRGIAPI------LRSRRHG-----FQRVDVLPHLPEQDIARRILTELASDPGVLHVMEKYQWSVGALCEMYPEGLVGVSTVCVMGLNENKGQRILLRLRTDDLQGWRKILSIRKVLYHEMAHNVHSDHDDQFHILMRTIEREVNAFNQSGRVIGGSTYIQAASTSCGPAAFAGGFGRLGGASADLTQMLPARVMAGHAALKRLSEE 311
            P    +  ++A  EA+  +    Q+LI KGK L D+     +L  G   V  +L+  SA AL+A+A     +           T  + R +  I      L +R H      F+ +  LP LP++  AR ILT LA D G+LHVM +++W VG+L EM+P+G VGV  VCV+GLNENKGQRILLRLRTDDL+G+RK L+I+KVL+HE+AHN  SDH++ F+ LMR +E E  A      V G +T +    T+  P   + GFG + G +AD T    AR +    AL RL  +
Sbjct:   17 PEGAAVGAVKAALEAQLHVPATEQRLIAKGKVLDDA----ARLAAGQTAV--LLVRPSADALAAMAAQETAI-------QQADTARAARPVISIHERNAALSARAHAALSYRFEAIAPLPGLPDEAKARAILTSLAQDKGILHVMAQHKWRVGSLAEMFPDGKVGVDPVCVLGLNENKGQRILLRLRTDDLRGFRKYLTIKKVLFHELAHNEVSDHNNDFYKLMRQVEAECTA------VPGTTTALPL--TNDAPDG-SPGFGHVLGGAADATD---ARELRAQRALDRLQAQ 285          
BLAST of NO08G03360 vs. NCBI_GenBank
Match: XP_016608111.1 (hypothetical protein SPPG_04414 [Spizellomyces punctatus DAOM BR117] >KND00072.1 hypothetical protein SPPG_04414 [Spizellomyces punctatus DAOM BR117])

HSP 1 Score: 172.9 bits (437), Expect = 3.300e-39
Identity = 125/346 (36.13%), Postives = 174/346 (50.29%), Query Frame = 0
Query:    3 SDDSAAAKHLSLDLSFKNQHHVVTMPASTPLTDIQAMAEAKTGIAL--IHQKLIHKGKTLTDSTITLGQLGRGTDTVKLVLIGTSAAALSALADGPKLVGDVRIINDLGSTGGSDRGIAPILRSRRHG--------FQRVDVLPHLPEQDIARRILTELASDPGVLHVMEKYQWSVGALCEMYPEGLVGVSTVCVMGLNENKGQRILLRLRTDDLQGWRKILSIRKVLYHEMAHNVHSDHDDQFHILMRTIEREVNAFNQSGRVIG--GSTYIQAASTSCGPAAFAGGFGRLGGASADLTQMLPARVMAGHAALKRLSEEEKEIEEACASGRHAAPTLPALPTPSQ 337
            SD +     +S  ++ K     +T      ++D++A   +   I +    QKL+ KGK+      TL  +G  T+  KL+LIG+SAA + A+ +  K   + +      +   S R + P    R  G        F  +  LP   ++  A  +L  L  D G+  +M  ++WSVGAL E++P      S   ++G NENKGQRI LRLRTDDL G+R   SIRKVL HE+AH VHSDH+  FH L R + RE +A  + GR +G  G  Y      +    AF GG  RLGG S          ++A  AALKRL+ EE E+ E C SG HA  +  A    SQ
Sbjct:   10 SDQNGGDNVISFSVTHKGTVVPLTFALLATISDVKAHLASLPSINIPPHAQKLLFKGKSSYAENATLASIGVKTN-AKLLLIGSSAAEIHAVQEATKRKQEAQ------ARAASQRPVRPSQPIRSIGSVDDANYTFHSIRPLPGFSDEKQATLLLKRLRDDAGIQSIMRNHKWSVGALVELHP------SERTILGYNENKGQRIALRLRTDDLDGFRYYDSIRKVLLHELAHMVHSDHNADFHALNRQLNRECDAVTRGGRTLGAKGEYYNSGEEEAVDAPAFMGGTFRLGGGSQSRDNKSQREILA-EAALKRLTREEVELVEGCGSGIHADDSDDAHQAASQ 341          
BLAST of NO08G03360 vs. NCBI_GenBank
Match: ETI43078.1 (hypothetical protein F443_11902 [Phytophthora parasitica P1569])

HSP 1 Score: 172.6 bits (436), Expect = 4.400e-39
Identity = 112/295 (37.97%), Postives = 171/295 (57.97%), Query Frame = 0
Query:   13 SLDLSFKNQHHVVTMP--ASTPLTDIQAMAEAKTGIALIHQKLIHKGKTLTDSTITLGQLGRGTD--TVKLVLIGTSAAALSAL------ADGPKLVGDVRIINDLGSTGGSDRGI-APILRSRRHGFQRVDVLPHLPEQDIARRILTELASDPGVLHVMEKYQWSVGALCEMYPEGLVGVSTVCVMGLNENKGQRILLRLRTDDLQGWRKILSIRKVLYHEMAHNVHSDHDDQFHILMRTIEREVNAF---NQSGRVIGGSTYIQAASTSCGPAAFAGGFGRLGGASADLTQML 294
            +L +++K Q + ++ P  +S  + ++QA  E   G+    Q+L  K + + D +  L  L    D  T  L+++G S A +  +       +    + + R + D+      ++GI A    S  + F  ++ L +  ++D A+ IL  LA+D G+L VM K++WSVG L EM P+G VGV  VCV+GLN+NKGQ+ILLRLRTDDL G+RK LSI+KVL+HE++HNVHS+HD++F+ LMR +E+E N     N  G  +GGS        S      +G   RLGG SA  +++L
Sbjct:    3 TLSVNYKGQTYALSFPDESSPTIAELQAQIELVVGVQKDAQRLFQKRRRV-DCSDELKLLRDVCDEATPLLLMVGASTAQIEGMKATQTAVEREMKIRESRRVVDISK---RNQGIQARDAVSTNYRFHAIEPLKNFADKDKAQEILERLANDRGILAVMAKHKWSVGVLAEMPPDGKVGVDPVCVLGLNQNKGQKILLRLRTDDLLGFRKFLSIKKVLFHELSHNVHSEHDNKFYQLMRQVEKECNELDWTNSGGAAVGGSPAALHDDDSTSRNVSSG--HRLGGGSAGTSRLL 291          
BLAST of NO08G03360 vs. NCBI_GenBank
Match: ETM42995.1 (hypothetical protein L914_11448 [Phytophthora parasitica])

HSP 1 Score: 172.6 bits (436), Expect = 4.400e-39
Identity = 112/295 (37.97%), Postives = 171/295 (57.97%), Query Frame = 0
Query:   13 SLDLSFKNQHHVVTMP--ASTPLTDIQAMAEAKTGIALIHQKLIHKGKTLTDSTITLGQLGRGTD--TVKLVLIGTSAAALSAL------ADGPKLVGDVRIINDLGSTGGSDRGI-APILRSRRHGFQRVDVLPHLPEQDIARRILTELASDPGVLHVMEKYQWSVGALCEMYPEGLVGVSTVCVMGLNENKGQRILLRLRTDDLQGWRKILSIRKVLYHEMAHNVHSDHDDQFHILMRTIEREVNAF---NQSGRVIGGSTYIQAASTSCGPAAFAGGFGRLGGASADLTQML 294
            +L +++K Q + ++ P  +S  + ++QA  E   G+    Q+L  K + + D +  L  L    D  T  L+++G S A +  +       +    + + R + D+      ++GI A    S  + F  ++ L +  ++D A+ IL  LA+D G+L VM K++WSVG L EM P+G VGV  VCV+GLN+NKGQ+ILLRLRTDDL G+RK LSI+KVL+HE++HNVHS+HD++F+ LMR +E+E N     N  G  +GGS        S      +G   RLGG SA  +++L
Sbjct:    3 TLSVNYKGQTYALSFPDESSPTIAELQAQIELVVGVQKDAQRLFQKRRRV-DCSDELKLLRDVCDEATPLLLMVGASTAQIEGMKATQTAVEREMKIRESRRVVDISK---RNQGIQARDAVSTNYRFHAIEPLKNFADKDKAQEILERLANDRGILAVMAKHKWSVGVLAEMPPDGKVGVDPVCVLGLNQNKGQKILLRLRTDDLLGFRKFLSIKKVLFHELSHNVHSEHDNKFYQLMRQVEKECNELDWTNSGGAAVGGSPAALHDDDSTSRNVSSG--HRLGGGSAGTSRLL 291          
BLAST of NO08G03360 vs. NCBI_GenBank
Match: ETP40924.1 (hypothetical protein, variant 1 [Phytophthora parasitica P10297])

HSP 1 Score: 172.6 bits (436), Expect = 4.400e-39
Identity = 112/295 (37.97%), Postives = 171/295 (57.97%), Query Frame = 0
Query:   13 SLDLSFKNQHHVVTMP--ASTPLTDIQAMAEAKTGIALIHQKLIHKGKTLTDSTITLGQLGRGTD--TVKLVLIGTSAAALSAL------ADGPKLVGDVRIINDLGSTGGSDRGI-APILRSRRHGFQRVDVLPHLPEQDIARRILTELASDPGVLHVMEKYQWSVGALCEMYPEGLVGVSTVCVMGLNENKGQRILLRLRTDDLQGWRKILSIRKVLYHEMAHNVHSDHDDQFHILMRTIEREVNAF---NQSGRVIGGSTYIQAASTSCGPAAFAGGFGRLGGASADLTQML 294
            +L +++K Q + ++ P  +S  + ++QA  E   G+    Q+L  K + + D +  L  L    D  T  L+++G S A +  +       +    + + R + D+      ++GI A    S  + F  ++ L +  ++D A+ IL  LA+D G+L VM K++WSVG L EM P+G VGV  VCV+GLN+NKGQ+ILLRLRTDDL G+RK LSI+KVL+HE++HNVHS+HD++F+ LMR +E+E N     N  G  +GGS        S      +G   RLGG SA  +++L
Sbjct:    3 TLSVNYKGQTYALSFPDESSPTIAELQAQIELVVGVQKDAQRLFQKRRRV-DCSDELKLLRDVCDEATPLLLMVGASTAQIEGMKATQTAVEREMKIRESRRVVDISK---RNQGIQARDAVSTNYRFHAIEPLKNFADKDKAQEILERLANDRGILAVMAKHKWSVGVLAEMPPDGKVGVDPVCVLGLNQNKGQKILLRLRTDDLLGFRKFLSIKKVLFHELSHNVHSEHDNKFYQLMRQVEKECNELDWTNSGGAAVGGSPAALHDDDSTSRNVSSG--HRLGGGSAGTSRLL 291          
The following BLAST results are available for this feature:
BLAST of NO08G03360 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM26815.17.500e-14045.60Ubiquitin-associated/translation elongation factor... [more]
CBJ49209.17.400e-6331.07conserved unknown protein [Ectocarpus siliculosus][more]
XP_008618402.18.500e-4339.27hypothetical protein SDRG_14076 [Saprolegnia dicli... [more]
XP_012204418.12.100e-4138.23hypothetical protein SPRG_09603 [Saprolegnia paras... [more]
XP_009525314.11.800e-4038.64hypothetical protein PHYSODRAFT_249618 [Phytophtho... [more]
OQR88122.11.200e-3940.82hypothetical protein ACHHYP_07547 [Achlya hypogyna... [more]
XP_016608111.13.300e-3936.13hypothetical protein SPPG_04414 [Spizellomyces pun... [more]
ETI43078.14.400e-3937.97hypothetical protein F443_11902 [Phytophthora para... [more]
ETM42995.14.400e-3937.97hypothetical protein L914_11448 [Phytophthora para... [more]
ETP40924.14.400e-3937.97hypothetical protein, variant 1 [Phytophthora para... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL109nonsL109Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR083ncniR083Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR141ngnoR141Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK008681NSK008681Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO08G03360.1NO08G03360.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|553126gene_3668Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100018g26gene3731Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO08G03360.1NO08G03360.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO08G03360 ID=NO08G03360|Name=NO08G03360|organism=Nannochloropsis oceanica|type=gene|length=3883bp
CTTTCGTGTCATCATAAGACATTTCTCGTCACTTAAAACAAATGAGGGCA
TTTGGCTTCTGCAGCTGCTTTGCAATGATTGAAATATCAGCATACATTGC
ACAAAGGCCTCGTACATTGAAGAATCGTAAAGTTCAGATGTTTTACGAGG
CCATCTCTCGAATGATGATTCCAGACCTTGATGTGGCAGACAATATATTC
ATTTTAAGTGGATCGTAAAAGATGTGGTGCATCATCTCAACGGCTCACTG
AACTTCCCCCTTTCATGCTCCACGTCCCTTTTTTCACACGCTCAATCGCG
TCCAAACCTCGCCCTTCATTTACAGCATTGCTGCCACCAGAGCCATGGGA
TCGGATGATTCTGCCGCAGCCAAGCATTTAAGCCTGGACCTAAGCTTTAA
GAACCAACATCACGTCGTGACAATGCCCGCAAGCACTCCCCTCACTGACA
TTCAAGCGATGGCGGAGGCCAAGACCGGCATTGCACTTATCCACCAGAAA
CTAATTCACAAGGGAAAGACCCTCACAGATTCAACCATCACCCTGGGTCA
GCTTGGCAGGGGGACGGACACCGTCAAGCTTGTGCTCATTGGGACTAGCG
CTGCTGCCCTCTCTGCGCTGGCGGACGGCCCCAAGCTGGTTGGCGACGTG
CGCATCATCAATGACCTAGGCAGTACGGGTGGGAGTGACAGGGGCATAGC
TCCCATTTTGCGATCTCGTCGCCACGGGTTCCAGCGCGTGGACGTCTTGC
CCCACTTGCCAGAGCAGGACATAGCGCGGCGCATTCTGACTGAGTTGGCG
TCGGACCCGGGAGTGCTACATGTGATGGAAAAGTACCAGTGGAGCGTGGG
CGCCCTGTGCGAGATGTATCCCGAAGGCTTGGTTGGGGTCAGTACTGTGT
GTGTCATGGgtacgtgctcgtagttttctctccttcctcgcggctatctc
agaaccctaacttctgcgacctcttccctgcctttgtccatgtccagcat
gctcgagcttcaaatttgaacctcaattggaattagaaatccgccgaccc
attcaaattcttttcgtgttctcccccctcttctcagGTCTCAACGAAAA
CAAAGGCCAACGCATCCTCCTACGCCTCCGTACCGACGACCTCCAAGGTT
GGCGCAAGATCCTCAGTATCCGCAAAGTACTCTACCACGAAATGGCGCAT
AATGTCCACTCAGACCACGACGATCAATTTCACATCCTGATGCGTACCAT
CGAACGAGAAGTGAATGCTTTCAACCAGAGCGGGCGTGTCATCGGGGGTT
CGACCTACATTCAAGCTGCCTCGACATCGTGTGGTCCTGCGGCTTTCGCC
GGGGGGTTTGGACGGCTTGGGGGGGCAAGCGCGGATCTGACGCAAATGCT
CCCAGCTAGGGTTATGGCAGGGCACGCAGCTTTGAAGCGACTGTCCGAGG
AGGAGAAAGAGATTGAGGAAGCTTGTGCCTCAGGGCGACATGCTGCACCG
ACGCTTCCGGCTCTTCCTACTCCGTCTCAGGAGGTGGACAATGACAGTAG
TTGCTATAGCAGCAGTAACTATATGGTAGAGTCGGGCGAGGAAGAGGGGA
GGAGATACCCACCCTCGCCGCTCTCACACCATCACCATCCAGAGCTGCAA
GTTGTGGAACCGCCAATGCCGCAGGCGACAGAGGAGGAGCTACGTGGTTT
GGAGAAATCGTCCTCGGTAGCAATTGCACCATCCACCGCACCAGCATCAC
CAACCGCACAAGCGCCGCCCACGCTCCTCTCTGCCATTCCATGGGCTGAG
ACCACTCCCCCCCCTTCTGTTCAAAACGGAAAGGAGATCACCCCGGCTTT
TTCGCGTCAACCACCATCCTCCACATCGCGGCCAGAAGAGGCAGTTGCGT
CCATATCAGCGTCAGTGGAGAAAGCAGACCTCTTTCCACTTGCCCCCCCC
CCTGATGAAATCACTACCAGTAGCATTGTCGCTCCTCCCACTGCTGATGC
AGCAATTCATGACGCAACCGAGCAACTCCTGGGACTAGGATTCGCGGAAA
TAGAGGTACGACGGGCATTGCAGGAATCTGGCGGTGACGTGATGCAAGCC
GCAGATTATCTCCTTATGTCGGCAGAAGCGGAGAAAGATCGAGGGGGGGG
AGGAGAAGAGGGAAGAGGAGAGGGAATGGACAGCGAGGAAGGCGCAGCAG
CAGCAGCGGCAGTTGGTGACTCGGCTTTATCCCACCCATTCAATAGTCGG
CAAGCGCGTGTAATGGATGCTGTCCAACGCCTGGCGCAGCAAACAAGGGG
CGACCGGGAGGTGGCGGCGTTGGCATTCACCACGCTCCACAGTATGCTTC
AATCGCTACTCGACCACCCACAGGAACCGAAATATAAACGCGTACGGTTG
ACGAATGTGAAGTTTCAACGGGCCTTGGGACGGCTCATGCCGGCAATGGA
TTTGTTGAGGGCTGTTGGGTTTGAGGAGCGGGATGGGGGCGCTGTGTTGG
AATACACGAGAAATGACCCCGGGTTGTTGTGGTGGGGGAAGAGTGCTATG
GAAGGAGTACAAGATCAAGCAAGTAAGTTTCTATGACGCGACATCTATGT
GGAAATATTTCTTCGTTGATAGTAGAGTTGATGTAAAGATGGTAACGGGT
GATATGACACAAAAAGAACTATGTACAACGTCGCGCCCTTCTCTCCCTCT
GGTTGCTCGACGCTCGTTTCTGGCTTCACATCTCGTCCATTTTGTCGAGC
CATTAAGACGGACGTGTATCGGTCGTGGAATCGTTTACCATTTAACCTGC
CGGCGGCGTTGCTCGGGTGGGCAGGGCGGAGGAGACGGAGGCTGCAGCCC
ACGAGGGTGGGGTTGGGAGAAAAGCCACGTCGCGCCTAGTGCAAGCGGCG
TGAGCACAAAGCCACCCACCCATACCCTGCCACCACGCTTTGTTTTCCAG
GTCCAAGCTAATGGCCAGAATGCCATGATTCGATTGCCACCTGTTAACTG
CGGCGGCCGTAGTGCGGCCTTTGACACAGAAAGTACGTCGGGGAGGGTGG
GGAGGTTAATGTAGTATATATATGTTTGTATGTTACGTGTCATATTGTTA
TGTTATATGGGCATATAGTTATAGTAATGGTTGCACATTATATAATTATG
CTGAGAAACGGGCTCCAGGCCCGAAGGTAATCCCTATTTTGTCCATAATC
AAGACGCGCTCGTGTGTTTTTTGTGTTCTTACATCACACTACGTGTAGTG
CTACACAGGCCACAATAAGGCTCTAACACCTGCCCGATGGCGTCCAACAT
CCTCAACCTTCTACGGAGTGCCGAGCTTGTCCGTGTGGGTGGCGCTTCGC
ATTCTGCCTCCCCTTTACTAGGTTTTGATGGCATCAAAGGCAAGCTCCTC
CTCATCTATTTCTCTGCAAGATGGTGCCCGCCCTGCCGTGGTTTCACGCC
CAAGCTCAAAAACTTCTATGAGAGAGTTGCAAACGAGAGCCCAATGGAGG
TGGTGTGGGTGTCGTCGGATGACTCTCAAACGGAATGGAATGAGTACGGA
AGCCAGATGGCACCTTACTTGGCAGTGCCTTACGCAAACGACGCCCTCCG
AACGAGGCTCAAGCAAGAGCTGGGTGTATGCGCGGGCAAAGAGCAGGAAA
GTGTGGGGGTGAAGGATAGGAAACGGGGCATCCCTACATTAGCTGTCATT
AAGCTGGACGGAACGCTTGTGACGTTGGAAGGCGCCGAGGAACTGGAGAA
GAGGGGCTTTGATGTGATTAAGGAGTGGGGCGCGTGAAGGAGCGTCAAAG
GAACCATTTCGTATGGTGAAGGAAAATTTAGAGGCGATGAAGGATTGACA
TGTTTTGATATTCTAGTAAAGACGCATTCGTAG
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protein sequence of NO08G03360.1

>NO08G03360.1-protein ID=NO08G03360.1-protein|Name=NO08G03360.1|organism=Nannochloropsis oceanica|type=polypeptide|length=688bp
MGSDDSAAAKHLSLDLSFKNQHHVVTMPASTPLTDIQAMAEAKTGIALIH
QKLIHKGKTLTDSTITLGQLGRGTDTVKLVLIGTSAAALSALADGPKLVG
DVRIINDLGSTGGSDRGIAPILRSRRHGFQRVDVLPHLPEQDIARRILTE
LASDPGVLHVMEKYQWSVGALCEMYPEGLVGVSTVCVMGLNENKGQRILL
RLRTDDLQGWRKILSIRKVLYHEMAHNVHSDHDDQFHILMRTIEREVNAF
NQSGRVIGGSTYIQAASTSCGPAAFAGGFGRLGGASADLTQMLPARVMAG
HAALKRLSEEEKEIEEACASGRHAAPTLPALPTPSQEVDNDSSCYSSSNY
MVESGEEEGRRYPPSPLSHHHHPELQVVEPPMPQATEEELRGLEKSSSVA
IAPSTAPASPTAQAPPTLLSAIPWAETTPPPSVQNGKEITPAFSRQPPSS
TSRPEEAVASISASVEKADLFPLAPPPDEITTSSIVAPPTADAAIHDATE
QLLGLGFAEIEVRRALQESGGDVMQAADYLLMSAEAEKDRGGGGEEGRGE
GMDSEEGAAAAAAVGDSALSHPFNSRQARVMDAVQRLAQQTRGDREVAAL
AFTTLHSMLQSLLDHPQEPKYKRVRLTNVKFQRALGRLMPAMDLLRAVGF
EERDGGAVLEYTRNDPGLLWWGKSAMEGVQDQASKFL*
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Synonyms
Publications