NO08G03110, NO08G03110 (gene) Nannochloropsis oceanica

Overview
NameNO08G03110
Unique NameNO08G03110
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1578
Alignment locationchr8:858220..859797 -

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr8genomechr8:858220..859797 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO08G03110 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL109nonsL109Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR083ncniR083Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR141ngnoR141Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO08G03110.1NO08G03110.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO08G03110.1NO08G03110.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO08G03110 ID=NO08G03110|Name=NO08G03110|organism=Nannochloropsis oceanica|type=gene|length=1578bp
ATGGACGCTGCTGCCAAGAAGGGCGAAGCACCCCCTCCGGCCCCGGCCAC
AACCACGgtacgcaaagccaggttatcagcaagggtctgtgatagttttg
gatacctgggaaagggcaagcggggtgggtgagaattgattgtagatgtg
tcctggctcccgtcctgctggcctcgaggcttgttatgtcctccttccac
tacgtctcgtttggacaccttttgctcacctcatccctcgcgatcctcac
cccgtcgcacacagGCGGAAGTATCCCCTAGTATAGGGATTCGCGAGGCG
GAAGCGGGAAGCGGGGGGAAAGGAGCCGGAGGCCGGTCCAGCAAGGAAGA
GGGAGTGGAGAACCCGTTGTCGTTGGCCATCGAGGAAGGAGGCGAAGGAG
AAGGCATGGCACGGGGCGAGCAGCAGCAGCAGCAGGAGCCGCCACCGCCG
CAGGATGTTGTAGAGGAAAAATGGGCAGAGGAGCGGAAGGAGGGTGGTGA
ATCGATTGCCGGCGGTATTCGCAGCCGTGTCAACAGTGGCGGGAGGGACG
AAGTCCTGAAAGGCGATGGAGGGGGCGTCAGAGCAGACCCATCATGTGCG
TTGCCTCGTGGACCATCATCACAGGTAGAGCTCCCGGAGCAGCAGCCGCA
GCCATCATCAATGCAACCGCCCATGCGTCCTCCCCCGCCCCCTCAACAAC
CACAACATCAACACCACCAACCACCACCACCACCACAACCACAACAGCAC
CATTATCAACAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCCACAAGAACT
AAGTCGCCACCCCATCGCGCAGCAACATGAGGCCCACGCCCCCATGCGGC
CTTATGAGCAGCAGGAGAGACAAGGAGGAGAACAACAAGTTCACCTACAG
CAACAGCAGCAACAGCAGCAACAGCAACTCCTCAACCTTCAAAGGCAACT
CCAAGCTCACCGCGCCCAGCAAGAAGCAGCAGCAGCAGCAGCACAACAAC
AACAACAGCAGCACCAGCAGCAGCAGGCCGCTCGATTCAATAACCACTCC
TCTTCCTCTCAACTGTATCAGTACCACCACCAGCAGCAGCAGCAGCAGCA
GCCGCAGCCGCAACGAATTCTTCCTCACTCGTCGATTTTACCCACAGACG
CCCAACAGCTACAACAGCCGCCACAACAATCTTCCGTGCAGTCAGTTCCT
CCCCCCTTCTCCCAGAGCTATTTTCCCCCTCCCTCGCATGTGGTGGCGGC
CGCGCGTACCCAAAGCGCGAGCAATCGTTACTTCCCCCCTCCCTCCCACG
TCGTTGCAGCCGCACGTGCCCAAAGCAATAGCGCCAACGGAGGAGGAGAA
AACGGGAGCAGCAGTAGCATCAGCAGCAGCAGCAGTGGTGGTAATAGCGG
TCCTCATGAAGGCGAAGTCTACATCTCTGTTCGTGATCGATATGGCAGTG
GCGGAGGAGGAGGAGAAGGGGGGGGGGGGGAGGGAATGGAGGAAGAGGGG
GGTTCCACCATCCCATGTCTTCTCATCATCAGGCTTACCCCCAGCATCCG
CACCACCAGCCTTCGCATACACATGTGA
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protein sequence of NO08G03110.1

>NO08G03110.1-protein ID=NO08G03110.1-protein|Name=NO08G03110.1|organism=Nannochloropsis oceanica|type=polypeptide|length=457bp
MDAAAKKGEAPPPAPATTTAEVSPSIGIREAEAGSGGKGAGGRSSKEEGV
ENPLSLAIEEGGEGEGMARGEQQQQQEPPPPQDVVEEKWAEERKEGGESI
AGGIRSRVNSGGRDEVLKGDGGGVRADPSCALPRGPSSQVELPEQQPQPS
SMQPPMRPPPPPQQPQHQHHQPPPPPQPQQHHYQQQQQQQQQQQPQELSR
HPIAQQHEAHAPMRPYEQQERQGGEQQVHLQQQQQQQQQQLLNLQRQLQA
HRAQQEAAAAAAQQQQQQHQQQQAARFNNHSSSSQLYQYHHQQQQQQQPQ
PQRILPHSSILPTDAQQLQQPPQQSSVQSVPPPFSQSYFPPPSHVVAAAR
TQSASNRYFPPPSHVVAAARAQSNSANGGGENGSSSSISSSSSGGNSGPH
EGEVYISVRDRYGSGGGGGEGGGGEGMEEEGGSTIPCLLIIRLTPSIRTT
SLRIHM*
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Synonyms
Publications