NO08G03040, NO08G03040 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO08G03040 vs. NCBI_GenBank
Match: EWM26680.1 (rab1 family protein [Nannochloropsis gaditana]) HSP 1 Score: 365.5 bits (937), Expect = 1.500e-97 Identity = 191/213 (89.67%), Postives = 194/213 (91.08%), Query Frame = 0 Query: 74 MSKRDYDFLFKLVLIGDTGVGKSCLLLRFADDAFTDSYISTIGVDFRFRTVKIDKKTFKLQIWDTAGQERFRTITSAYYRGADGIIMVYDVTNEESFEHIQDWLNEVNRYASEGTCKLLVGNKSDREDKVVSTERAKKFADELGIPFLETSAKNASNVEEAFLTMAQELIRLREAKGAAAXXXXXXXXXXXXXXTVSVSNKNTEEKKVGKNCC 287 MSKRDYDFLFKLVLIGDTGVGKSCLLLRFADDAFTDSYISTIGVDFRFRTVKIDKKTFKLQIWDTAGQERFRTITSAYYRGADGIIMVYDVTNEESFEHIQDWLNEVNRYASEGTCKLLVGNKSDR DKVVSTERAKKFADELGIPFLETSAKNASNVEEAFLTMAQELIRLREAKGAAA TVS+S+KN +E V KNCC Sbjct: 1 MSKRDYDFLFKLVLIGDTGVGKSCLLLRFADDAFTDSYISTIGVDFRFRTVKIDKKTFKLQIWDTAGQERFRTITSAYYRGADGIIMVYDVTNEESFEHIQDWLNEVNRYASEGTCKLLVGNKSDRPDKVVSTERAKKFADELGIPFLETSAKNASNVEEAFLTMAQELIRLREAKGAAA-PGPGGAASGKSGDTVSLSSKNDKE-GVMKNCC 211
BLAST of NO08G03040 vs. NCBI_GenBank
Match: CBJ33128.1 (Rab1A, RAB family GTPase [Ectocarpus siliculosus]) HSP 1 Score: 313.9 bits (803), Expect = 5.100e-82 Identity = 155/178 (87.08%), Postives = 166/178 (93.26%), Query Frame = 0 Query: 74 MSKRDYDFLFKLVLIGDTGVGKSCLLLRFADDAFTDSYISTIGVDFRFRTVKIDKKTFKLQIWDTAGQERFRTITSAYYRGADGIIMVYDVTNEESFEHIQDWLNEVNRYASEGTCKLLVGNKSDREDKVVSTERAKKFADELGIPFLETSAKNASNVEEAFLTMAQELIRLREAKGA 252 MSKRDYD LFKLVLIGD+GVGKSCLLLRFADDAFTDSYISTIGVDFRFRTVKIDKKT KLQIWDTAGQERFRTITSAYYRGADGIIMVYDVT +ESF+H+ DWL+EVNRYASEGT KLL+GNKSDREDKVV + AK++A+ LGIPFLETSAKNASNVEEAFLTMA ELIR REA+ A Sbjct: 1 MSKRDYDHLFKLVLIGDSGVGKSCLLLRFADDAFTDSYISTIGVDFRFRTVKIDKKTVKLQIWDTAGQERFRTITSAYYRGADGIIMVYDVTGQESFDHVNDWLSEVNRYASEGTSKLLIGNKSDREDKVVDSAAAKEYAESLGIPFLETSAKNASNVEEAFLTMASELIRTREARAA 178
BLAST of NO08G03040 vs. NCBI_GenBank
Match: XP_009039314.1 (hypothetical protein AURANDRAFT_38219 [Aureococcus anophagefferens] >EGB06060.1 hypothetical protein AURANDRAFT_38219 [Aureococcus anophagefferens]) HSP 1 Score: 312.4 bits (799), Expect = 1.500e-81 Identity = 155/179 (86.59%), Postives = 166/179 (92.74%), Query Frame = 0 Query: 74 MSKRDYDFLFKLVLIGDTGVGKSCLLLRFADDAFTDSYISTIGVDFRFRTVKIDKKTFKLQIWDTAGQERFRTITSAYYRGADGIIMVYDVTNEESFEHIQDWLNEVNRYASEGTCKLLVGNKSDREDKVVSTERAKKFADELGIPFLETSAKNASNVEEAFLTMAQELIRLREAKGAA 253 MSKRDYD LFKLVLIGDTGVGKSCLLLRFADDAFT+SYISTIGVDFRFRTVK+D KT KLQIWDTAGQERFRTITSAYYRGADGIIMVYDVT+ ESF+H+ DWL EVNRYA+EGTCKLLVGNK D EDKVV+TE AK++AD LGIPFLETSAKNA+NVEEAFLTMA ELIRLREA +A Sbjct: 1 MSKRDYDHLFKLVLIGDTGVGKSCLLLRFADDAFTESYISTIGVDFRFRTVKVDGKTVKLQIWDTAGQERFRTITSAYYRGADGIIMVYDVTSSESFDHVSDWLTEVNRYANEGTCKLLVGNKCDMEDKVVTTEAAKEYADGLGIPFLETSAKNATNVEEAFLTMAGELIRLREASQSA 179
BLAST of NO08G03040 vs. NCBI_GenBank
Match: XP_008877927.1 (hypothetical protein H310_12581 [Aphanomyces invadans] >ETV93585.1 hypothetical protein H310_12581 [Aphanomyces invadans]) HSP 1 Score: 298.1 bits (762), Expect = 2.900e-77 Identity = 150/177 (84.75%), Postives = 160/177 (90.40%), Query Frame = 0 Query: 77 RDYDFLFKLVLIGDTGVGKSCLLLRFADDAFTDSYISTIGVDFRFRTVKIDKKTFKLQIWDTAGQERFRTITSAYYRGADGIIMVYDVTNEESFEHIQDWLNEVNRYASEGTCKLLVGNKSDRE-DKVVSTERAKKFADELGIPFLETSAKNASNVEEAFLTMAQELIRLREAKGAA 253 RDYD LFKLVLIGD+GVGKSCLLLRFADDAFT+SYI+TIGVDFRFRTVKIDKKT KLQIWDTAGQERFRTITSAYYRGADGIIMVYDVT++ESF+H+ DWLNEVNRYASEGTCKLLVGNKSD KVVS E AK FAD L IPFLETSAKNA NVEEAFLTMA ELI +RE G++ Sbjct: 3 RDYDHLFKLVLIGDSGVGKSCLLLRFADDAFTESYITTIGVDFRFRTVKIDKKTVKLQIWDTAGQERFRTITSAYYRGADGIIMVYDVTSQESFDHVNDWLNEVNRYASEGTCKLLVGNKSDMSTKKVVSFESAKAFADSLAIPFLETSAKNAQNVEEAFLTMASELITIREMVGSS 179
BLAST of NO08G03040 vs. NCBI_GenBank
Match: CCI41724.1 (unnamed protein product [Albugo candida]) HSP 1 Score: 298.1 bits (762), Expect = 2.900e-77 Identity = 149/177 (84.18%), Postives = 160/177 (90.40%), Query Frame = 0 Query: 77 RDYDFLFKLVLIGDTGVGKSCLLLRFADDAFTDSYISTIGVDFRFRTVKIDKKTFKLQIWDTAGQERFRTITSAYYRGADGIIMVYDVTNEESFEHIQDWLNEVNRYASEGTCKLLVGNKSD-REDKVVSTERAKKFADELGIPFLETSAKNASNVEEAFLTMAQELIRLREAKGAA 253 +DYD LFKLVLIGD+GVGKSCLLLRFADDAFT+SYI+TIGVDFRFRTV+IDKKT KLQIWDTAGQERFRTITSAYYRGADGIIMVYDVTN+ESF+H+ DWLNEVNRYASEGTCKLLVGNKSD E++ VS E AK FAD L IPFLETSAKNA NVEEAFLTMA ELI +RE G A Sbjct: 3 KDYDHLFKLVLIGDSGVGKSCLLLRFADDAFTESYITTIGVDFRFRTVRIDKKTIKLQIWDTAGQERFRTITSAYYRGADGIIMVYDVTNQESFDHVNDWLNEVNRYASEGTCKLLVGNKSDIAENRAVSYETAKAFADSLSIPFLETSAKNAQNVEEAFLTMASELITIREMLGDA 179
BLAST of NO08G03040 vs. NCBI_GenBank
Match: XP_008611371.1 (Ras-like protein Rab-1A [Saprolegnia diclina VS20] >EQC35087.1 Ras-like protein Rab-1A [Saprolegnia diclina VS20]) HSP 1 Score: 297.7 bits (761), Expect = 3.800e-77 Identity = 151/177 (85.31%), Postives = 159/177 (89.83%), Query Frame = 0 Query: 77 RDYDFLFKLVLIGDTGVGKSCLLLRFADDAFTDSYISTIGVDFRFRTVKIDKKTFKLQIWDTAGQERFRTITSAYYRGADGIIMVYDVTNEESFEHIQDWLNEVNRYASEGTCKLLVGNKSD-REDKVVSTERAKKFADELGIPFLETSAKNASNVEEAFLTMAQELIRLREAKGAA 253 RDYD LFKLVLIGD+GVGKSCLLLRFADDAFT+SYI+TIGVDFRFRTVKIDKKT KLQIWDTAGQERFRTITSAYYRGADGIIMVYDVT++ESF+H+ DWLNEVNRYASEGTCKLLVGNKSD KVVS E AK FAD L IPFLETSAKNA NVEEAFLTMA ELI +RE G A Sbjct: 3 RDYDHLFKLVLIGDSGVGKSCLLLRFADDAFTESYITTIGVDFRFRTVKIDKKTVKLQIWDTAGQERFRTITSAYYRGADGIIMVYDVTSQESFDHVNDWLNEVNRYASEGTCKLLVGNKSDITSRKVVSYETAKAFADSLAIPFLETSAKNAQNVEEAFLTMASELITIRELVGNA 179
BLAST of NO08G03040 vs. NCBI_GenBank
Match: XP_009843908.1 (hypothetical protein H257_16979 [Aphanomyces astaci] >ETV66537.1 hypothetical protein H257_16979 [Aphanomyces astaci]) HSP 1 Score: 297.7 bits (761), Expect = 3.800e-77 Identity = 150/177 (84.75%), Postives = 160/177 (90.40%), Query Frame = 0 Query: 77 RDYDFLFKLVLIGDTGVGKSCLLLRFADDAFTDSYISTIGVDFRFRTVKIDKKTFKLQIWDTAGQERFRTITSAYYRGADGIIMVYDVTNEESFEHIQDWLNEVNRYASEGTCKLLVGNKSD-REDKVVSTERAKKFADELGIPFLETSAKNASNVEEAFLTMAQELIRLREAKGAA 253 RDYD LFKLVLIGD+GVGKSCLLLRFADDAFT+SYI+TIGVDFRFRTVKIDKKT KLQIWDTAGQERFRTITSAYYRGADGIIMVYDVT++ESF+H+ DWLNEVNRYASEGTCKLLVGNKSD KVVS E AK FAD L IPFLETSAKNA NVEEAFLTMA ELI +RE G++ Sbjct: 3 RDYDHLFKLVLIGDSGVGKSCLLLRFADDAFTESYITTIGVDFRFRTVKIDKKTVKLQIWDTAGQERFRTITSAYYRGADGIIMVYDVTSQESFDHVNDWLNEVNRYASEGTCKLLVGNKSDMTTKKVVSFESAKAFADSLAIPFLETSAKNAQNVEEAFLTMASELITIRELVGSS 179
BLAST of NO08G03040 vs. NCBI_GenBank
Match: XP_002909255.1 (Rab1 family GTPase, putative [Phytophthora infestans T30-4] >EEY58069.1 Rab1 family GTPase, putative [Phytophthora infestans T30-4]) HSP 1 Score: 297.7 bits (761), Expect = 3.800e-77 Identity = 150/178 (84.27%), Postives = 160/178 (89.89%), Query Frame = 0 Query: 77 RDYDFLFKLVLIGDTGVGKSCLLLRFADDAFTDSYISTIGVDFRFRTVKIDKKTFKLQIWDTAGQERFRTITSAYYRGADGIIMVYDVTNEESFEHIQDWLNEVNRYASEGTCKLLVGNKSDRED-KVVSTERAKKFADELGIPFLETSAKNASNVEEAFLTMAQELIRLREAKGAAA 254 RDYD LFKLVLIGD+GVGKSCLLLRFADDAFT+SYI+TIGVDFRFRTVKID KT KLQIWDTAGQERFRTITSAYYRGADGIIMVYDVT++ESF+H+ DWLNEVNRYASEGTCKLLVGNKSD D KVVS E AK FAD L IPFLETSAKNA NVEEAFLTMA ELI +RE G ++ Sbjct: 3 RDYDHLFKLVLIGDSGVGKSCLLLRFADDAFTESYITTIGVDFRFRTVKIDNKTVKLQIWDTAGQERFRTITSAYYRGADGIIMVYDVTSQESFDHVNDWLNEVNRYASEGTCKLLVGNKSDISDNKVVSYETAKAFADSLSIPFLETSAKNAQNVEEAFLTMASELITIREMVGESS 180
BLAST of NO08G03040 vs. NCBI_GenBank
Match: XP_012197705.1 (Ras-like protein ORAB-1 [Saprolegnia parasitica CBS 223.65] >KDO31826.1 Ras-like protein ORAB-1 [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 297.7 bits (761), Expect = 3.800e-77 Identity = 151/177 (85.31%), Postives = 159/177 (89.83%), Query Frame = 0 Query: 77 RDYDFLFKLVLIGDTGVGKSCLLLRFADDAFTDSYISTIGVDFRFRTVKIDKKTFKLQIWDTAGQERFRTITSAYYRGADGIIMVYDVTNEESFEHIQDWLNEVNRYASEGTCKLLVGNKSD-REDKVVSTERAKKFADELGIPFLETSAKNASNVEEAFLTMAQELIRLREAKGAA 253 RDYD LFKLVLIGD+GVGKSCLLLRFADDAFT+SYI+TIGVDFRFRTVKIDKKT KLQIWDTAGQERFRTITSAYYRGADGIIMVYDVT++ESF+H+ DWLNEVNRYASEGTCKLLVGNKSD KVVS E AK FAD L IPFLETSAKNA NVEEAFLTMA ELI +RE G A Sbjct: 3 RDYDHLFKLVLIGDSGVGKSCLLLRFADDAFTESYITTIGVDFRFRTVKIDKKTVKLQIWDTAGQERFRTITSAYYRGADGIIMVYDVTSQESFDHVNDWLNEVNRYASEGTCKLLVGNKSDITSRKVVSYETAKAFADSLAIPFLETSAKNAQNVEEAFLTMASELITIRELVGNA 179
BLAST of NO08G03040 vs. NCBI_GenBank
Match: OQR93783.1 (Rab1 family GTPase [Achlya hypogyna]) HSP 1 Score: 297.4 bits (760), Expect = 4.900e-77 Identity = 150/177 (84.75%), Postives = 159/177 (89.83%), Query Frame = 0 Query: 77 RDYDFLFKLVLIGDTGVGKSCLLLRFADDAFTDSYISTIGVDFRFRTVKIDKKTFKLQIWDTAGQERFRTITSAYYRGADGIIMVYDVTNEESFEHIQDWLNEVNRYASEGTCKLLVGNKSD-REDKVVSTERAKKFADELGIPFLETSAKNASNVEEAFLTMAQELIRLREAKGAA 253 RDYD LFKLVLIGD+GVGKSCLLLRFADDAFT+SYI+TIGVDFRFRTVKIDKKT KLQIWDTAGQERFRTITSAYYRGADGIIMVYDVT++ESF+H+ DWLNEVNRYASEGTCKLLVGNKSD KVVS E AK FAD L IPFLETSAKNA NVEEAFLTMA ELI +RE G + Sbjct: 3 RDYDHLFKLVLIGDSGVGKSCLLLRFADDAFTESYITTIGVDFRFRTVKIDKKTVKLQIWDTAGQERFRTITSAYYRGADGIIMVYDVTSQESFDHVNDWLNEVNRYASEGTCKLLVGNKSDITSRKVVSYETAKAFADSLAIPFLETSAKNAQNVEEAFLTMASELITIRELVGTS 179 The following BLAST results are available for this feature:
BLAST of NO08G03040 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO08G03040 ID=NO08G03040|Name=NO08G03040|organism=Nannochloropsis oceanica|type=gene|length=2319bpback to top protein sequence of NO08G03040.1 >NO08G03040.1-protein ID=NO08G03040.1-protein|Name=NO08G03040.1|organism=Nannochloropsis oceanica|type=polypeptide|length=287bpback to top Synonyms
Publications
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