NO08G02960, NO08G02960 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO08G02960 vs. NCBI_GenBank
Match: EWM26599.1 (th1-like protein [Nannochloropsis gaditana]) HSP 1 Score: 704.9 bits (1818), Expect = 2.200e-199 Identity = 397/609 (65.19%), Postives = 450/609 (73.89%), Query Frame = 0 Query: 1 MNFIDEMMTWKGWRRTLMEIFAAHKESKLLGGYCMQHLSRAGHNTEMADLVSVDDYWSVARGVLTELLLQVPWADHVDLGRLVGTLTRICCGTAYLHSFSQEVLREVEVALMEEVGREGEGGREEGREQSLVAMTRKFRRIRQELERGSWEAAER---AGGGGSGKERVGRSRFVHRLSAWQAEAAPVNSAEKGDPMKAREGRKRLLGAILDVFSEGGLSDHTLAVLLDAYVDSSVLFKERKKEGXXXXXXXXXXXXXXXXXXXXXXXXXXXLAKVKGPLAYLRHPQLLDALVKAIFDPKKRLNTASRRASACQILTVASTALFDGSVDREEADALYQGLREASTLLADEEMLTWNMSTSSIPPSLKGLLRAHPVVAMGFLHWLRVTIQDPEFHNSRQFNEVMRVLMRLLQFLVSERPLHHPAIFEALKALLTLKPTESSFNIIKMKRQALQCFVFLMSRGFVLPVLAFFHQILPEMDHALVRFFVGVTLVAAQPPYSPVFARALASLLREMVVRKALKSSLDDGHQEALLRFIETVCAEEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLLDPAMRKGLRLVYSHMLKK 607 M FID+MM ++ WRRTLMEIFA HKESKLLGGYCMQHLSR GHNTEMADLVSV+DYWSVARGV+TELL +VPWADHV L RL L RICC TAYLH+FSQ+VL +E L+ + Q L+A R+FRRIRQELE +WEAAE+ A G G R RFVHRLSAWQAEA P+N E+ DPM+A E R+R++ ++ +FSEG L+D A LL+ YVD+++LF ER KE XXXXXXXXXXXXX+A+++GPLA+LRHP+LL+ LV+AIFDPK RL+T +RRASACQ+L VASTAL DGSVDREEADALY GLR+AS LLADEEML WNM TS +PP LKGLLRAHPVVAMGFLHWLRVTIQDPEFHNSRQFNEVM V MRLLQFLV ERPLHHPAIFEAL+ALLTLKPTESSFNIIKMKRQALQC VFLMS GFVLPV+AFFH+ L EMDHALVR F+G+TLVAAQPPYS VFA ALASLLRE VV KAL+SSLD+ + AL++FIETVC + LLDPAMRKGLRLVYS MLKK Sbjct: 58 MVFIDDMMGYRRWRRTLMEIFAQHKESKLLGGYCMQHLSRTGHNTEMADLVSVEDYWSVARGVVTELLAEVPWADHVHLSRLSANLKRICCSTAYLHAFSQDVLWGLESKLLVRADASRDTS-NISTAQGLMAANRRFRRIRQELESAAWEAAEQGIGAAGASQGGSWYNRCRFVHRLSAWQAEAPPLNLTEEDDPMEAVEKRRRVVDMLVVLFSEGRLTDVAAATLLETYVDANILFTER-KEARTGAGEIPGSTTGEXXXXXXXXXXXXXIAQIRGPLAFLRHPRLLEVLVRAIFDPKDRLDTETRRASACQVLAVASTALEDGSVDREEADALYGGLRQASALLADEEMLRWNMCTSGMPPVLKGLLRAHPVVAMGFLHWLRVTIQDPEFHNSRQFNEVMHVFMRLLQFLVLERPLHHPAIFEALEALLTLKPTESSFNIIKMKRQALQCCVFLMSHGFVLPVVAFFHENLAEMDHALVRHFLGLTLVAAQPPYSSVFACALASLLRETVVSKALRSSLDEAPKRALVKFIETVCEND--------------------TEAKSNGDYKQLQDIPGLSDGPAASKSMLLDPAMRKGLRLVYSDMLKK 644
BLAST of NO08G02960 vs. NCBI_GenBank
Match: XP_009523672.1 (hypothetical protein PHYSODRAFT_497217 [Phytophthora sojae] >EGZ20955.1 hypothetical protein PHYSODRAFT_497217 [Phytophthora sojae]) HSP 1 Score: 151.4 bits (381), Expect = 9.400e-33 Identity = 128/528 (24.24%), Postives = 228/528 (43.18%), Query Frame = 0 Query: 3 FIDEMMTWKGWRRTLMEIFAAHKESKLLGGYCMQHLSRAGHNTEMADLVSVDDYWSVARGVLTELLLQVPWADHVDLGRLVGTLTRICCGTAYLHSFSQEVLREVEVALMEEVGREGEGGREEGREQSLVAMTRKFRRIRQELERGSWEAAERAGGGGSGKERVGRSRFVHRLSAWQAEAAPVNSAEKGDPMKAREGRKRLLGAILDVFSEGGLSDHTLAVLLDAYVDSSVLFKERKKEGXXXXXXXXXXXXXXXXXXXXXXXXXXXLAKVKGPLAYLRHPQLLDALVKAIFDPKKRLNTASRRASACQILTVAST--------ALFDGSVDREEAD-----ALYQGLREASTLLADEEMLTWNMSTSSIPPSLKGLLRAHPVVAMGFLHWLRVTIQDPEFHNSRQFNEVMRVLMRLLQFLVSERPLHHPAIFEALKALLTLKPTESSFNIIKMKRQALQCFVFLMSRGFVLPVLAFFHQILPEMDHALVRFFVGVTLVAAQPPYSPVFARALASLLREMVVRKALKS 518 ++ +M+ + WR L+E+ HK LL Y ++ +S AG++ E+A + S + ++SV GVL + ++P+A+ ++ + L ++CC +++ + ++QE+L ++ L + + G + + + K R+R EL+ E A G + R R+++ + + AIL + S+ + + L KE +K P+ +LR P +L AL+ +F+ ++ A + + AST GS D E D + + L EAS + + L +NM+ S + L ++ PVV+MG LHWL V + P F +S + L+R+L+ + P F L L L P + +++KR+ L+C VF+++ G+VLPVL F E+D AL+R F+ + PP+SP F+ AL +L V+ A+KS Sbjct: 365 WLTQMLNDRKWRLMLIELAETHKTCTLL-QYAIRRISEAGYHKEIASITSANAFFSVFSGVLVDAFSRIPFANEEEVVEDIAALNKVCCQSSHSYVYAQELLCSMDDKLYT---MQRDAGADSAEYSHIRMVRSKLNRVRGELQ----ETASGRFGAKIVPFHILRRRYIY------------------------DANPKFCDAILSIVKSKTCSE----------LSAETLAKE------------------------------FQTSKAPPPVVHLRDPMVLSALLDRLFNRSDSISPAFVQNCVFLLAYAASTKDERSLLQTGVQGSSDHVEVDDDGVESTKKALVEASAICKSDHTLGYNMNQSGVVDRLISVMSV-PVVSMGVLHWLEVILTSPGFFSSTPLHICFPSLLRILKASIKLHVAQWPIAFSVLVTSLRLHPDINPVKALELKRETLRCMVFMITSGYVLPVLEFVFTNTLELDQALLRNFITMLFSRIAPPFSPKFSVALTKILTHPKVQTAIKS 819
BLAST of NO08G02960 vs. NCBI_GenBank
Match: OQS02908.1 (hypothetical protein THRCLA_04779 [Thraustotheca clavata]) HSP 1 Score: 151.4 bits (381), Expect = 9.400e-33 Identity = 139/541 (25.69%), Postives = 236/541 (43.62%), Query Frame = 0 Query: 2 NFIDEMMTWKGWRRTLMEIFAAHKESKLLGGYCMQHLSRAGHNTEMADLVSVDDYWSVARGVLTELLLQVPWADHVDLGRLVGTLTRICCGTAYLHSFSQEVLREVEVALMEEVGREGEGGREEGREQSLVAMTRKFRRIRQELERGSWEAAERAGGGGSGKERVGRSRFVHRLSAWQAEAAPVNSAEKGDPMKAREGRKRLLGAILDVFSEGGLSDHTLAVLLDAYVDSSVLFKERKKEGXXXXXXXXXXXXXXXXXXXXXXXXXXXLAKVKGPLAYLRHPQLLDALVKAIFDPKKRLNTASRRASACQILTVASTALFD-----------GSVDREEADALYQGLREASTLLADEEMLTWNMSTSSIPPSLKGLLRAHPVVAMGFLHWLRVTIQDPEFHNSRQFNEVMRVLMRLLQFLVSERPLHHPAIFEALKALLTLKPTESSFNIIKMKRQALQCFVFLMSRGFVLPVLAFFHQILPEMDHALVRFFVGVTLVAAQPPYSPVFARALASLLREMVVRKALKSSLDDG----HQEAL 528 +++ M+ + WR L+E+ H LL Y ++ +S AGH+ E+A + + + ++SV ++T++L ++P A + + L ++C AY + ++QEVL ++++ L ++ ++ + K +RQEL E K + + R H L AA PM A GLS +++ L +VD ++ ++RK A P+A+LR +L++L A+F P + + T S RAS IL A++A+ D S + + + + L+EAS + E L++NM S L + + PVV+MG LHWL ++ F+N + V ++L++ + + P +F L L +P + ++++KR+ L+C V LM+ G+VLPVL F L +D AL+R FV + PPYS F +L V ALKS D HQ AL Sbjct: 844 SWLKSMLQDQKWRMMLIELAEKHSSCGLL-QYAIRRISEAGHHKEIASITNANVFFSVFNAIVTDILQRIPTASVDEAREDLTALQKMCNHAAYSYIYTQEVLLQLDMRLQDD-------------DEQTKILRSKIDHLRQELHTSVIE-----------KHGIRKVRAFHVLKRANISAA--------FPMLA---------------EATGLSKIPMSITLQ-WVD--MMLRDRKCTAPCAELLKQVYE-----------------APSPPPVAHLREQLVLESLTDALFHPFESI-TESHRASCAYILAYAASAVDDRSLLDTTPHNSSSFELPSLEPITKALQEASLVCKSETTLSYNMHESEAVDKLVKTMDS-PVVSMGVLHWLGRLLESKSFYNGPFLHACFPVFLKLMRHGIELHTVQWPIVFNVLIKALMCQPESNPVKVLELKRETLRCMVHLMTCGYVLPVLHFIQNKLDSLDQALLRNFVQLVKSRISPPYSSRFLIEWTKILVHPKVLLALKSCPSDTKAKLHQFAL 1314
BLAST of NO08G02960 vs. NCBI_GenBank
Match: XP_024582081.1 (th1 family protein [Plasmopara halstedii] >CEG45712.1 th1 family protein [Plasmopara halstedii]) HSP 1 Score: 149.8 bits (377), Expect = 2.700e-32 Identity = 132/549 (24.04%), Postives = 236/549 (42.99%), Query Frame = 0 Query: 3 FIDEMMTWKGWRRTLMEIFAAHKESKLLGGYCMQHLSRAGHNTEMADLVSVDDYWSVARGVLTELLLQVPWADHVDLGRLVGTLTRICCGTAYLHSFSQEVLREVEVALMEEVGREGEGGREEGREQSLVAMTR-KFRRIRQELERGSWEAAERAGGGGSGKERVGRSRFVHRLSAWQAEAAPVNSAEKGDPMKAREGRKRLLGAILDVFSEGGLSDHTLAVLLDAYVDSSVLFKERKKEGXXXXXXXXXXXXXXXXXXXXXXXXXXXLAKVKGPLAYLRHPQLLDALVKAIFDPKKRLNTASRRASACQILTVAST--------ALFDGS-----VDREEADALYQGLREASTLLADEEMLTWNMSTSSIPPSLKGLLRAHPVVAMGFLHWLRVTIQDPEFHNSRQFNEVMRVLMRLLQFLVSERPLHHPAIFEALKALLTLKPTESSFNIIKMKRQALQCFVFLMSRGFVLPVLAFFHQILPEMDHALVRFFVGVTLVAAQPPYSPVFARALASLLREMVVRKALKSSLDDGHQEALLRFIETVCAE 538 ++ +M++ + WR L+E+ HK LL Y ++ +S AGH+ E+A + S + ++ V GVL + ++P+A ++ + L ++CC +++ + ++QE+L ++ +++ + + E + + M R K R+ EL+ E A G + R R+++ + AIL + S+ + L Y ++K P+A+LR +L +L+ +F+P + +A + + AST +GS VD E + + L EAS + + L +NM+ S + L ++ PVV+MG LHWL V + P F +S + L+R+L+ + P F L L L P + +++KR+ L C VF+++ G+VLPVL F E+D AL+R F+ + V PPYS FA AL +L V+ A+K+ + + L+ T CA+ Sbjct: 323 WLTQMLSDRKWRLMLIELAETHKTCTLL-QYAIRRISEAGHHKEIASITSANAFFPVFNGVLVDAFSRIPFATEEEVVEDLAALKKVCCQSSHSYLYAQELLCSMD----DKLYSIQKDMKATSNEYTHIRMVRSKLNRVHSELQ----ETASGRFGAKIVPYHILRRRYIY------------------------DKNSEFCDAILSIIKTKKCSELSAQALAKEY----------------------------------------QMSKDPPPVAHLRDTMVLSSLLDRLFNPSDLITSAFIQNCVFLLAYAASTKDERSLLQTGVEGSSKQVQVDNESVETTKKALIEASAICKSDHTLGYNMNQSGVVDKLISVMSV-PVVSMGVLHWLEVILTSPGFFSSTPLHICFPSLLRILKESIKLHSAQWPIAFGVLVTSLRLHPDINPVKALELKRETLGCMVFMITNGYVLPVLEFIFTNTLELDQALLRNFITMLFVRIAPPYSQKFALALTRILTHPKVQTAIKTCPRESKMK--LQGFVTYCAK 795
BLAST of NO08G02960 vs. NCBI_GenBank
Match: XP_002908372.1 (negative elongation factor, putative [Phytophthora infestans T30-4] >EEY61455.1 negative elongation factor, putative [Phytophthora infestans T30-4]) HSP 1 Score: 149.4 bits (376), Expect = 3.600e-32 Identity = 127/529 (24.01%), Postives = 229/529 (43.29%), Query Frame = 0 Query: 3 FIDEMMTWKGWRRTLMEIFAAHKESKLLGGYCMQHLSRAGHNTEMADLVSVDDYWSVARGVLTELLLQVPWADHVDLGRLVGTLTRICCGTAYLHSFSQEVLREVEVALMEEVGREGEGGREEGREQSLVAMTR-KFRRIRQELERGSWEAAERAGGGGSGKERVGRSRFVHRLSAWQAEAAPVNSAEKGDPMKAREGRKRLLGAILDVFSEGGLSDHTLAVLLDAYVDSSVLFKERKKEGXXXXXXXXXXXXXXXXXXXXXXXXXXXLAKVKGPLAYLRHPQLLDALVKAIFDPKKRLNTASRRASACQILTVAST--------ALFDGSVDREEAD-----ALYQGLREASTLLADEEMLTWNMSTSSIPPSLKGLLRAHPVVAMGFLHWLRVTIQDPEFHNSRQFNEVMRVLMRLLQFLVSERPLHHPAIFEALKALLTLKPTESSFNIIKMKRQALQCFVFLMSRGFVLPVLAFFHQILPEMDHALVRFFVGVTLVAAQPPYSPVFARALASLLREMVVRKALKS 518 ++ +M++ + WR L+E+ HK LL Y ++ +S AGH+ E+A + S + ++ V GVL + ++P+A+ ++ + L ++CC +++ + ++QE+L ++ +++ + E + + M R K R+ EL+ E A G + R R+++ + + AIL + S+ + L Y S K P+A+LR P +L +L+ +F+P ++ A + + AST GS D+ E D + + L EAS + + + +NM+ S + L ++ PVV+MG LHWL V + P +S + L+R+L+ + P F L L L P + +++KR+ L+C VF+++ G+VLPVL F E+D AL+R F+ + PP+SP F+ AL +L V+ A+KS Sbjct: 331 WLTQMLSDRKWRLMLIELAETHKTCTLL-QYAIRRISEAGHHKEIASITSANAFFPVFSGVLVDAFSRIPFANEEEMVEDIAALKKVCCQSSHSYVYAQELLCSMD----DKLYLMQKDADATSAEYTHIRMVRSKLNRVHGELQ----ETASTRFGAKIVPFHILRRRYIY------------------------DANTKFCDAILSIVKTKKCSELSAEALAKEYQTS----------------------------------------KTPPPVAHLRDPMVLSSLLDRLFNPSDSISPAFVQNCVFLLAYAASTKDDRSLLQTGVQGSSDQVEVDDDGVESTKKALVEASAICKSDHTIGYNMNQSGVVDKLISVMSV-PVVSMGVLHWLEVILTSPGLFSSTPLHICFPSLLRILKASIKLHVAQWPISFGVLVTSLRLHPDVNPVKALELKRETLRCMVFMITSGYVLPVLEFVFTNTLELDQALLRNFITMLFARIAPPFSPKFSVALTKILTHPKVQTAIKS 785
BLAST of NO08G02960 vs. NCBI_GenBank
Match: ETI56327.1 (hypothetical protein F443_01077 [Phytophthora parasitica P1569] >ETL49528.1 hypothetical protein L916_00999 [Phytophthora parasitica] >ETM02585.1 hypothetical protein L917_00966 [Phytophthora parasitica] >ETM55835.1 hypothetical protein L914_01006 [Phytophthora parasitica] >ETO85056.1 hypothetical protein F444_01083 [Phytophthora parasitica P1976] >ETP54160.1 hypothetical protein F442_01022 [Phytophthora parasitica P10297]) HSP 1 Score: 148.7 bits (374), Expect = 6.100e-32 Identity = 128/529 (24.20%), Postives = 229/529 (43.29%), Query Frame = 0 Query: 3 FIDEMMTWKGWRRTLMEIFAAHKESKLLGGYCMQHLSRAGHNTEMADLVSVDDYWSVARGVLTELLLQVPWADHVDLGRLVGTLTRICCGTAYLHSFSQEVLREVEVALMEEVGREGEGGREEGREQSLVAMTR-KFRRIRQELERGSWEAAERAGGGGSGKERVGRSRFVHRLSAWQAEAAPVNSAEKGDPMKAREGRKRLLGAILDVFSEGGLSDHTLAVLLDAYVDSSVLFKERKKEGXXXXXXXXXXXXXXXXXXXXXXXXXXXLAKVKGPLAYLRHPQLLDALVKAIFDPKKRLNTASRRASACQILTVAST-----ALFDG--------SVDREEADALYQGLREASTLLADEEMLTWNMSTSSIPPSLKGLLRAHPVVAMGFLHWLRVTIQDPEFHNSRQFNEVMRVLMRLLQFLVSERPLHHPAIFEALKALLTLKPTESSFNIIKMKRQALQCFVFLMSRGFVLPVLAFFHQILPEMDHALVRFFVGVTLVAAQPPYSPVFARALASLLREMVVRKALKS 518 ++ +M+ + WR L+E+ HK LL Y ++ +S AGH+ E+A + S + ++ V GVL + ++P+A+ ++ + L ++CC +++ + ++QE+L ++ +++ + E + + M R K R+ EL+ E A G + R R+++ + + AIL + + + VL Y S K P+A+LR P +L +L+ +F+P ++ A + + AST L G VD + ++ + L EAS + + L +NM+ S + L ++ PVV+MG LHWL V + P F +S + L+R+L+ + P F L L L P + +++KR+ L+C VF+++ G+VLPVL F E+D AL+R F+ + PP+SP F+ AL +L V+ A+KS Sbjct: 329 WLTQMLNDRKWRLMLIELAETHKTCTLL-QYAIRRISEAGHHKEIASITSANAFFPVFSGVLLDAFSRIPFANEEEVVEDIAALKKVCCQSSHSYVYAQELLCSMD----DKLYLMQKDAVVTSAEYTHIRMVRSKLNRVHGELQ----ETASSRFGAKIVPFHILRRRYIY------------------------DSNSKFCDAILSIVKTKKCLELSAEVLAKEYQTS----------------------------------------KTPPPVAHLRDPMVLSSLLDRLFNPSDSISPAFVQNCVFLLAYAASTKDERSLLQTGVQGSSNQVEVDDDGVESTKKALVEASAICKSDHTLGYNMNQSGVVDKLISVMSV-PVVSMGVLHWLEVLLTSPGFFSSTPLHICFPSLLRILKASIKLHVAQWPISFGVLVTSLRLHPDVNPVKALELKRETLRCMVFMITSGYVLPVLEFVFTNTLELDQALLRNFITMLFARIAPPFSPKFSVALTKILTHPKVQTAIKS 783
BLAST of NO08G02960 vs. NCBI_GenBank
Match: ETK96152.1 (hypothetical protein L915_01016 [Phytophthora parasitica] >ETP26163.1 hypothetical protein F441_01050 [Phytophthora parasitica CJ01A1]) HSP 1 Score: 148.7 bits (374), Expect = 6.100e-32 Identity = 128/529 (24.20%), Postives = 229/529 (43.29%), Query Frame = 0 Query: 3 FIDEMMTWKGWRRTLMEIFAAHKESKLLGGYCMQHLSRAGHNTEMADLVSVDDYWSVARGVLTELLLQVPWADHVDLGRLVGTLTRICCGTAYLHSFSQEVLREVEVALMEEVGREGEGGREEGREQSLVAMTR-KFRRIRQELERGSWEAAERAGGGGSGKERVGRSRFVHRLSAWQAEAAPVNSAEKGDPMKAREGRKRLLGAILDVFSEGGLSDHTLAVLLDAYVDSSVLFKERKKEGXXXXXXXXXXXXXXXXXXXXXXXXXXXLAKVKGPLAYLRHPQLLDALVKAIFDPKKRLNTASRRASACQILTVAST-----ALFDG--------SVDREEADALYQGLREASTLLADEEMLTWNMSTSSIPPSLKGLLRAHPVVAMGFLHWLRVTIQDPEFHNSRQFNEVMRVLMRLLQFLVSERPLHHPAIFEALKALLTLKPTESSFNIIKMKRQALQCFVFLMSRGFVLPVLAFFHQILPEMDHALVRFFVGVTLVAAQPPYSPVFARALASLLREMVVRKALKS 518 ++ +M+ + WR L+E+ HK LL Y ++ +S AGH+ E+A + S + ++ V GVL + ++P+A+ ++ + L ++CC +++ + ++QE+L ++ +++ + E + + M R K R+ EL+ E A G + R R+++ + + AIL + + + VL Y S K P+A+LR P +L +L+ +F+P ++ A + + AST L G VD + ++ + L EAS + + L +NM+ S + L ++ PVV+MG LHWL V + P F +S + L+R+L+ + P F L L L P + +++KR+ L+C VF+++ G+VLPVL F E+D AL+R F+ + PP+SP F+ AL +L V+ A+KS Sbjct: 328 WLTQMLNDRKWRLMLIELAETHKTCTLL-QYAIRRISEAGHHKEIASITSANAFFPVFSGVLLDAFSRIPFANEEEVVEDIAALKKVCCQSSHSYVYAQELLCSMD----DKLYLMQKDAVVTSAEYTHIRMVRSKLNRVHGELQ----ETASSRFGAKIVPFHILRRRYIY------------------------DSNSKFCDAILSIVKTKKCLELSAEVLAKEYQTS----------------------------------------KTPPPVAHLRDPMVLSSLLDRLFNPSDSISPAFVQNCVFLLAYAASTKDERSLLQTGVQGSSNQVEVDDDGVESTKKALVEASAICKSDHTLGYNMNQSGVVDKLISVMSV-PVVSMGVLHWLEVLLTSPGFFSSTPLHICFPSLLRILKASIKLHVAQWPISFGVLVTSLRLHPDVNPVKALELKRETLRCMVFMITSGYVLPVLEFVFTNTLELDQALLRNFITMLFARIAPPFSPKFSVALTKILTHPKVQTAIKS 782
BLAST of NO08G02960 vs. NCBI_GenBank
Match: XP_008890736.1 (hypothetical protein PPTG_00914 [Phytophthora parasitica INRA-310] >ETN24692.1 hypothetical protein PPTG_00914 [Phytophthora parasitica INRA-310]) HSP 1 Score: 148.7 bits (374), Expect = 6.100e-32 Identity = 128/529 (24.20%), Postives = 229/529 (43.29%), Query Frame = 0 Query: 3 FIDEMMTWKGWRRTLMEIFAAHKESKLLGGYCMQHLSRAGHNTEMADLVSVDDYWSVARGVLTELLLQVPWADHVDLGRLVGTLTRICCGTAYLHSFSQEVLREVEVALMEEVGREGEGGREEGREQSLVAMTR-KFRRIRQELERGSWEAAERAGGGGSGKERVGRSRFVHRLSAWQAEAAPVNSAEKGDPMKAREGRKRLLGAILDVFSEGGLSDHTLAVLLDAYVDSSVLFKERKKEGXXXXXXXXXXXXXXXXXXXXXXXXXXXLAKVKGPLAYLRHPQLLDALVKAIFDPKKRLNTASRRASACQILTVAST-----ALFDG--------SVDREEADALYQGLREASTLLADEEMLTWNMSTSSIPPSLKGLLRAHPVVAMGFLHWLRVTIQDPEFHNSRQFNEVMRVLMRLLQFLVSERPLHHPAIFEALKALLTLKPTESSFNIIKMKRQALQCFVFLMSRGFVLPVLAFFHQILPEMDHALVRFFVGVTLVAAQPPYSPVFARALASLLREMVVRKALKS 518 ++ +M+ + WR L+E+ HK LL Y ++ +S AGH+ E+A + S + ++ V GVL + ++P+A+ ++ + L ++CC +++ + ++QE+L ++ +++ + E + + M R K R+ EL+ E A G + R R+++ + + AIL + + + VL Y S K P+A+LR P +L +L+ +F+P ++ A + + AST L G VD + ++ + L EAS + + L +NM+ S + L ++ PVV+MG LHWL V + P F +S + L+R+L+ + P F L L L P + +++KR+ L+C VF+++ G+VLPVL F E+D AL+R F+ + PP+SP F+ AL +L V+ A+KS Sbjct: 329 WLTQMLNDRKWRLMLIELAETHKTCTLL-QYAIRRISEAGHHKEIASITSANAFFPVFSGVLLDAFSRIPFANEEEVVEDIAALKKVCCQSSHSYVYAQELLCSMD----DKLYLMQKDAVVTSAEYTHIRMVRSKLNRVHGELQ----ETASSRFGAKIVPFHILRRRYIY------------------------DSNSKFCDAILSIVKTKKCLELSAEVLAKEYQTS----------------------------------------KTPPPVAHLRDPMVLSSLLDRLFNPSDSISPAFVQNCVFLLAYAASTKDERSLLQTGVQGSSNQVEVDDDGVESTKKALVEASAICKSDHTLGYNMNQSGVVDKLISVMSV-PVVSMGVLHWLEVLLTSPGFFSSTPLHICFPSLLRILKASIKLHVAQWPISFGVLVTSLRLHPDVNPVKALELKRETLRCMVFMITSGYVLPVLEFVFTNTLELDQALLRNFITMLFARIAPPFSPKFSVALTKILTHPKVQTAIKS 783
BLAST of NO08G02960 vs. NCBI_GenBank
Match: XP_012207212.1 (hypothetical protein SPRG_12055 [Saprolegnia parasitica CBS 223.65] >KDO22068.1 hypothetical protein SPRG_12055 [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 144.4 bits (363), Expect = 1.200e-30 Identity = 138/548 (25.18%), Postives = 233/548 (42.52%), Query Frame = 0 Query: 3 FIDEMMTWKGWRRTLMEIFAAHKESKLLGGYCMQHLSRAGHNTEMADLVSVDDYWSVARGVLTELLLQVPWADHVDLGRLVGTLTRICCGTAYLHSFSQEVLREVEVALMEEVGREGEGGREEGREQSLVAMTRKFRRIRQELERGSWEAAERAGGGGSGKERVGRSRFVHRLSAWQAEAAPVNSAEKGDPMKAREGRKRLLGAILDVFSEGGLSDHTLAVLLDAYVDSSVLFKERKKEGXXXXXXXXXXXXXXXXXXXXXXXXXXXLAKVKGPLAYLRHPQLLDALVKAIFDPKKRLNTASRRASACQILTVASTALFDGSVDREEA---------DALYQGLREASTLLADEEMLTWNMSTSSIPPSLKGLLRA--HPVVAMGFLHWLRVTIQDPEFHNSRQFNEVMRVLMRLLQFLVSERPLHHPAIFEALKALLTLKPTESSFNIIKMKRQALQCFVFLMSRGFVLPVLAFFHQILPEMDHALVRFFVGVTLVAAQPPYSPVFARALASLLREMVVRKALKSSLDDGHQEALLRFIETVCAEEG 540 ++ M+ + WR L+E+ H LL Y ++ +S AGH+ E+A + + + ++SV ++T++L ++P A + + L ++C AY H ++QEVL +++ L + G + +A+ K R+RQEL G K V + + H L Q + A+ AI ++ E S +L Y S P+A++R +L+ L A+F P + + T S R++ +L A++ + D S+ A +A+ L+E S + E L++NM S +++ +LR PVVAMG LHWL ++ F N + V ++LL+ + P +F L L +P + ++++KR+ L+C V LM+ G+VLPVL F Q +D AL+R FV + L PP+S F ++L V ALKS D +A L+ CA+ G Sbjct: 336 WLKAMLQDQQWRLMLIELAEKHSTCGLL-QYAIRRISEAGHHKEIASITNANVFFSVFNAIVTDMLQRMPSASVEEARDDLHALQKMCAHAAYSHVYTQEVLLQLDTHLRAQDG-------------AAMALRTKLDRLRQELH-----------GSVLAKHGVRKVQAFHVLKRAQLTQTFPDLAQ----------------AIDMLYRERKCSAACAELLKHVYAQPS-----------------------------------------PPPVAHVREHLVLEYLTDALFHPYESI-TESHRSACAHVLAYAASVVDDRSLLDTHAISAQACPPFEAIATALQETSVVCKSETTLSYNMHESE---AIEKVLRTMETPVVAMGVLHWLGRLLESKSFLNGPFLHACFPVFLKLLRHDIELHMAQWPTVFNVLVKALMCQPESNPVKVLELKRETLRCMVHLMTVGYVLPVLHFISQSTDALDQALLRNFVQLVLSRIAPPFSERFVTEWTTVLVHPKVLLALKSCPTD--TKAKLQQYAVYCADLG 795
BLAST of NO08G02960 vs. NCBI_GenBank
Match: GAY02632.1 (negative elongation factor, putative [Pythium insidiosum]) HSP 1 Score: 142.5 bits (358), Expect = 4.400e-30 Identity = 130/540 (24.07%), Postives = 240/540 (44.44%), Query Frame = 0 Query: 3 FIDEMMTWKGWRRTLMEIFAAHKESKLLGGYCMQHLSRAGHNTEMADLVSVDDYWSVARGVLTELLLQVPWADHVDLGRLVGTLTRICCGTAYLHSFSQEVLREVEVALMEEVGREGEGGREEGREQSLVAMTRKFRRIRQELERGSWEAAERAGGGGSGKERVGRSRFVHRLSAWQAEAAPVNSAEKGDPMKAREGRKRLLGAILDVFSEGGLSDHTLAVLLDAYVDSSVLFKERKKEGXXXXXXXXXXXXXXXXXXXXXXXXXXXLAKVKGPLAYLRHP----------QLLDALVKAIFDPKKRLNTASRRASACQILTVASTALFDGSV---------------DREEADALYQGLREASTLLADEEMLTWNMSTSSIPPSLKGLLRAHPVVAMGFLHWLRVTIQDPEFHNSRQFNEVMRVLMRLLQFLVSERPLHHPAIFEALKALLTLKPTESSFNIIKMKRQALQCFVFLMSRGFVLPVLAFFHQILPEMDHALVRFFVGVTLVAAQPPYSPVFARALASLLREMVVRKALKS 518 ++ +M++ + R L+E+ HK Y ++ +S AGH+ E+A + + + ++SV G+L + ++P++ D + L +ICC +AY +++E+L ++ L G + E G E+ V++ +R +R +L R ++ + +F + A+ P+ R+R L + FS+ LS ++ D VL KE + + P+A+LR+P + +L+ +F+P L T + A+ +L A+ A + S+ D E + L+EAST+ + L++NMS+S + L G + P+ ++G LHW+ VT++ P F+NS N L+R+L+ + P F L L + P + +++KR++L+C VF+++ G+VLPVL F ++D +L+R F+ + + PPYS F AL +L V+ A+KS Sbjct: 402 WLSDMLSDRKSRLMLIELAEKHK-------YAVRRISGAGHHKELASIATANAFFSVFNGILLDAFCRIPFSSDDDAQEDLAALQKICCHSAYSFVYAEELLDTLDHKL---AGLQDEVGVEQ------VSVRAHYRMVRSKLSRVRFDL-----------QATAIDKFGPLVEAFH-------------PL-----RRRSLMDLNPKFSQAILSIVKSRHCSESAAD--VLVKEYRS------------------------------PETAPPVAHLRNPLVSSATVMKNNIFRSLLDPMFNPALPL-TEAHAANCIHLLGYAACAKDERSILRSSTAPASKNTVSLDIGELEKTKLALQEASTVCRSDHTLSYNMSSSGVFEKL-GEVMEVPLASIGVLHWVEVTLRSPTFYNSSLLNVCFPSLLRILKGSIRRHVSQWPIAFRVLVVALRMHPDINPVKALELKRESLRCMVFMITSGYVLPVLEFILSNTVDLDQSLLRSFITLLMAQIAPPYSAKFVLALTKILTHPKVQSAIKS 862 The following BLAST results are available for this feature:
BLAST of NO08G02960 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO08G02960 ID=NO08G02960|Name=NO08G02960|organism=Nannochloropsis oceanica|type=gene|length=1863bpback to top protein sequence of NO08G02960.1 >NO08G02960.1-protein ID=NO08G02960.1-protein|Name=NO08G02960.1|organism=Nannochloropsis oceanica|type=polypeptide|length=621bpback to top Synonyms
Publications
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