NO08G02940, NO08G02940 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO08G02940 vs. NCBI_GenBank
Match: CBJ28342.1 (expressed unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 233.0 bits (593), Expect = 9.100e-58 Identity = 110/165 (66.67%), Postives = 130/165 (78.79%), Query Frame = 0 Query: 66 AAAKVPHTGLPGTDKERTFIAIKPDGVQRGLIAAIIARFENKGFKLVGMKMLWPTKAKAESHYSDLSTKPFFAGLVAYFSSGPIIAMVWEGKDAIKTGRVLLGATNPAAAVPGTIRGDMAISVGRNICHGSDGPESAVHEIGNWFTEAEISDYTRSLDEWIVADN 231 AA +TG PGT ER+FIAIKPDGVQR L+ +I+RFE KG+KLV MKM+WPTK A +HY+DLS KPFF+GLV YFSSGPI+AMVWEG + I TGR +LGATNP ++ PG++RGD I VGRN+ HGSDG ESA HEIG WFTE E S + R+LD WIVADN Sbjct: 73 AAPAFKYTGEPGTAHERSFIAIKPDGVQRQLVGEVISRFEKKGYKLVAMKMIWPTKEMAANHYADLSKKPFFSGLVDYFSSGPIVAMVWEGPEVILTGRKMLGATNPNSSEPGSLRGDYCIRVGRNLIHGSDGGESAQHEIGMWFTEEECSAWPRTLDAWIVADN 237
BLAST of NO08G02940 vs. NCBI_GenBank
Match: CCA19774.1 (nucleoside diphosphate kinase B putative [Albugo laibachii Nc14] >CCA26755.1 nucleoside diphosphate kinase B putative [Albugo laibachii Nc14]) HSP 1 Score: 229.6 bits (584), Expect = 1.000e-56 Identity = 118/225 (52.44%), Postives = 150/225 (66.67%), Query Frame = 0 Query: 7 RRCLQRT-AGVRAFSSSMARASAXXXXXXXXQALGGLALVAAGAAWAAQEMRFGAPAHCSAAAKVPHTGLPGTDKERTFIAIKPDGVQRGLIAAIIARFENKGFKLVGMKMLWPTKAKAESHYSDLSTKPFFAGLVAYFSSGPIIAMVWEGKDAIKTGRVLLGATNPAAAVPGTIRGDMAISVGRNICHGSDGPESAVHEIGNWFTEAEISDYTRSLDEWIVADN 231 +R L+RT A + ++A++ + L ++ A AW A ++ KVPHTG+P T ERTFIAIKPDGVQRGLI +IARFE KG+KLV M+ + ++ +A HY+DLS++PFF GLV YF+SGPI+ MVWEG D I TGR +LGATNP A PGT+RGD IS GRN+ HGSDGPESA HEI WF ++ DY+R+LD WIVADN Sbjct: 26 QRALKRTFARNLRTNCTVAQSPSFSKASSIATCLALTSITAGSIAWNVSN-----EAESKSSEKVPHTGIPRTQHERTFIAIKPDGVQRGLIHEVIARFEKKGYKLVAMRFMTASEQRAREHYADLSSRPFFPGLVDYFTSGPIVIMVWEGTDVILTGRKILGATNPNQAAPGTLRGDNCISTGRNLIHGSDGPESAKHEIAMWFPADQVQDYSRALDSWIVADN 245
BLAST of NO08G02940 vs. NCBI_GenBank
Match: XP_024586565.1 (nucleoside diphosphate kinase [Plasmopara halstedii] >CEG50196.1 nucleoside diphosphate kinase [Plasmopara halstedii]) HSP 1 Score: 228.4 bits (581), Expect = 2.300e-56 Identity = 112/186 (60.22%), Postives = 134/186 (72.04%), Query Frame = 0 Query: 45 VAAGAAWAAQEMRFGAPAHCSAAAKVPHTGLPGTDKERTFIAIKPDGVQRGLIAAIIARFENKGFKLVGMKMLWPTKAKAESHYSDLSTKPFFAGLVAYFSSGPIIAMVWEGKDAIKTGRVLLGATNPAAAVPGTIRGDMAISVGRNICHGSDGPESAVHEIGNWFTEAEISDYTRSLDEWIVADN 231 VAA +A + A A P G+PGT ERTFIAIKPDGVQRGLI+ +I RFE KG+KLV +K + T+ +A++HY+DLS +PFF GLV YF+SGPI+ MVWEG D I TGR +LGATNP A PGT+RGD IS GRN+ HGSDGPESA HEI WFT EIS+Y R+LD WIV+DN Sbjct: 39 VAATVGVSAFALTAAPIAENKAKPTTPLAGVPGTSTERTFIAIKPDGVQRGLISEVIGRFEKKGYKLVALKQMTATEERAKAHYADLSARPFFPGLVKYFTSGPIVCMVWEGTDVILTGRKILGATNPNQAAPGTLRGDNCISTGRNLVHGSDGPESAKHEITMWFTPEEISNYERALDTWIVSDN 224
BLAST of NO08G02940 vs. NCBI_GenBank
Match: XP_002902842.1 (nucleoside diphosphate kinase B [Phytophthora infestans T30-4] >EEY56012.1 nucleoside diphosphate kinase B [Phytophthora infestans T30-4]) HSP 1 Score: 228.0 bits (580), Expect = 2.900e-56 Identity = 105/163 (64.42%), Postives = 128/163 (78.53%), Query Frame = 0 Query: 68 AKVPHTGLPGTDKERTFIAIKPDGVQRGLIAAIIARFENKGFKLVGMKMLWPTKAKAESHYSDLSTKPFFAGLVAYFSSGPIIAMVWEGKDAIKTGRVLLGATNPAAAVPGTIRGDMAISVGRNICHGSDGPESAVHEIGNWFTEAEISDYTRSLDEWIVADN 231 + P G+PGT KERTFIAIKPDGVQRGLI+ +I RFE KG+KLV +K++ T+A+A++HY+DLS + FF GLV YF+SGPI+ MVWEG D I TGR +LGATNP A PGT+RGD IS GRN+ HGSDGP+SA HEI WFT E S+Y R+LD WIV+DN Sbjct: 59 SSTPLGGVPGTSKERTFIAIKPDGVQRGLISEVIGRFEKKGYKLVALKLMTATEARAKAHYADLSERSFFPGLVKYFTSGPIVCMVWEGTDVILTGRKILGATNPNQAAPGTLRGDNCISTGRNLVHGSDGPDSAKHEITMWFTPEEASNYERALDTWIVSDN 221
BLAST of NO08G02940 vs. NCBI_GenBank
Match: OWZ20159.1 (Nucleoside diphosphate kinase B [Phytophthora megakarya]) HSP 1 Score: 227.3 bits (578), Expect = 5.000e-56 Identity = 104/153 (67.97%), Postives = 124/153 (81.05%), Query Frame = 0 Query: 78 TDKERTFIAIKPDGVQRGLIAAIIARFENKGFKLVGMKMLWPTKAKAESHYSDLSTKPFFAGLVAYFSSGPIIAMVWEGKDAIKTGRVLLGATNPAAAVPGTIRGDMAISVGRNICHGSDGPESAVHEIGNWFTEAEISDYTRSLDEWIVADN 231 T KERTFIAIKPDGVQRGLI+ +IARFE KG+KLV +KM+ T+ +A++HY+DLS +PFF GLV YFSSGPI+ MVWEG D I TGR +LGATNP A PGT+RGD IS GRN+ HGSDGP+SA HEI WFT E+S+Y R+LD WIV+DN Sbjct: 73 TSKERTFIAIKPDGVQRGLISEVIARFEKKGYKLVALKMMTATEERAKNHYADLSARPFFPGLVKYFSSGPIVCMVWEGTDVILTGRKILGATNPNQAAPGTLRGDNCISTGRNLVHGSDGPDSAKHEINMWFTNEEVSNYERALDTWIVSDN 225
BLAST of NO08G02940 vs. NCBI_GenBank
Match: GAX09601.1 (nucleoside-diphosphate kinase [Fistulifera solaris]) HSP 1 Score: 219.2 bits (557), Expect = 1.400e-53 Identity = 99/165 (60.00%), Postives = 126/165 (76.36%), Query Frame = 0 Query: 62 AHCSAAAKVPHTGLPGTDKERTFIAIKPDGVQRGLIAAIIARFENKGFKLVGMKMLWPTKAKAESHYSDLSTKPFFAGLVAYFSSGPIIAMVWEGKDAIKTGRVLLGATNPAAAVPGTIRGDMAISVGRNICHGSDGPESAVHEIGNWFTEAEISDYTRSLDEWI 227 A + A +P G+PGT++ERTFIA KPD VQRGL+ AIIARFE +G+KLVG+KM+WPTK AE+HY DLS KPFF GLV +FSSGPI+ M WEG D I+ GR +LG T P A+ PG+IRGD +I +GRNICHGSD PE A HE+ WF E ++D+ +++D W+ Sbjct: 54 AFTNCAETIPVYGVPGTNQERTFIACKPDAVQRGLVGAIIARFETRGYKLVGLKMVWPTKEMAETHYKDLSKKPFFPGLVEFFSSGPIVCMCWEGLDVIRQGRQMLGETQPLASKPGSIRGDYSIDLGRNICHGSDSPEGAEHELKMWFPEG-VNDWAKTIDAWV 217
BLAST of NO08G02940 vs. NCBI_GenBank
Match: GAX28484.1 (nucleoside-diphosphate kinase [Fistulifera solaris]) HSP 1 Score: 218.8 bits (556), Expect = 1.800e-53 Identity = 103/182 (56.59%), Postives = 133/182 (73.08%), Query Frame = 0 Query: 45 VAAGAAWAAQEMRFGAPAHCSAAAKVPHTGLPGTDKERTFIAIKPDGVQRGLIAAIIARFENKGFKLVGMKMLWPTKAKAESHYSDLSTKPFFAGLVAYFSSGPIIAMVWEGKDAIKTGRVLLGATNPAAAVPGTIRGDMAISVGRNICHGSDGPESAVHEIGNWFTEAEISDYTRSLDEWI 227 +A G A + F A + A +P G+PGT++ERTFIA KPD VQRGL+ AIIARFE +G+KLVG+KM+WPTK AE+HY DL+ KPFF GLV +FSSGPI+ M WEGKD I+ GR +LG T P A+ PG+IRGD +I +GRNICHGSD PE A HE+ WF E ++D+ +++D W+ Sbjct: 40 MATGLVVATSTIGF---ASTNCAEPIPVYGVPGTNQERTFIACKPDAVQRGLVGAIIARFETRGYKLVGLKMVWPTKEMAETHYKDLAKKPFFPGLVEFFSSGPIVCMCWEGKDVIRQGRQMLGETQPLASKPGSIRGDYSIDLGRNICHGSDSPEGAEHELKMWFPEG-VNDWGKTIDAWV 217
BLAST of NO08G02940 vs. NCBI_GenBank
Match: EJK49021.1 (hypothetical protein THAOC_32138 [Thalassiosira oceanica]) HSP 1 Score: 217.2 bits (552), Expect = 5.200e-53 Identity = 102/183 (55.74%), Postives = 135/183 (73.77%), Query Frame = 0 Query: 44 LVAAGAAWAAQEMRFGAPAHCSAAAKVPHTGLPGTDKERTFIAIKPDGVQRGLIAAIIARFENKGFKLVGMKMLWPTKAKAESHYSDLSTKPFFAGLVAYFSSGPIIAMVWEGKDAIKTGRVLLGATNPAAAVPGTIRGDMAISVGRNICHGSDGPESAVHEIGNWFTEAEISDYTRSLDEWI 227 L A GAA A + R PA C K+P G+ GT++ERTF+A+KPDGVQRGL+ IIARFE +G+KLVG+K++WPT A++HY+DLS KPF+ GL +FSSGPI+ M WEGKD I GR +LG T P A+ PG+IRGD +I +GRNICHGSD PE+A HE+ WF E ++D+ +++D W+ Sbjct: 42 LSATGAAVTAYQFR-QPPASCD---KLPVHGIAGTNQERTFLAVKPDGVQRGLVGDIIARFEKRGYKLVGLKLVWPTLEMAQNHYADLSKKPFYPGLCKFFSSGPIVCMCWEGKDIINQGRQMLGETQPLASKPGSIRGDFSIDLGRNICHGSDSPEAAAHELAMWFPEG-VNDWAKTVDAWV 219
BLAST of NO08G02940 vs. NCBI_GenBank
Match: XP_008898584.1 (hypothetical protein PPTG_06420 [Phytophthora parasitica INRA-310] >ETI31328.1 hypothetical protein F443_21701 [Phytophthora parasitica P1569] >ETK71706.1 hypothetical protein L915_21101 [Phytophthora parasitica] >ETL25142.1 hypothetical protein L916_20977 [Phytophthora parasitica] >ETL78353.1 hypothetical protein L917_20836 [Phytophthora parasitica] >ETN16237.1 hypothetical protein PPTG_06420 [Phytophthora parasitica INRA-310] >ETO60031.1 hypothetical protein F444_21733 [Phytophthora parasitica P1976] >ETP01133.1 hypothetical protein F441_21591 [Phytophthora parasitica CJ01A1] >ETP29285.1 hypothetical protein F442_21557 [Phytophthora parasitica P10297] >KUF75804.1 Nucleoside diphosphate kinase [Phytophthora nicotianae]) HSP 1 Score: 216.5 bits (550), Expect = 8.900e-53 Identity = 99/148 (66.89%), Postives = 120/148 (81.08%), Query Frame = 0 Query: 83 TFIAIKPDGVQRGLIAAIIARFENKGFKLVGMKMLWPTKAKAESHYSDLSTKPFFAGLVAYFSSGPIIAMVWEGKDAIKTGRVLLGATNPAAAVPGTIRGDMAISVGRNICHGSDGPESAVHEIGNWFTEAEISDYTRSLDEWIVADN 231 TFIAIKPDGVQRGLI+ +I RFE KG+KLV +K++ T+A+A++HY+DLS +PFF GLV YF+SGPI+ MVWEG D I TGR +LGATNP A PGT+RGD IS GRN+ HGSDGP+SA HEI WFT EIS+Y R+LD WIV+DN Sbjct: 78 TFIAIKPDGVQRGLISEVIGRFEKKGYKLVALKLMTATEARAKAHYADLSERPFFPGLVKYFTSGPIVCMVWEGTDVILTGRKILGATNPNQAAPGTLRGDNCISTGRNLVHGSDGPDSAKHEITMWFTPEEISNYERALDSWIVSDN 225
BLAST of NO08G02940 vs. NCBI_GenBank
Match: PRP84299.1 (nucleoside diphosphate kinase B [Planoprotostelium fungivorum]) HSP 1 Score: 215.7 bits (548), Expect = 1.500e-52 Identity = 104/166 (62.65%), Postives = 122/166 (73.49%), Query Frame = 0 Query: 60 APAHCSAAAKVPHTGLPGTDKERTFIAIKPDGVQRGLIAAIIARFENKGFKLVGMKMLWPTKAKAESHYSDLSTKPFFAGLVAYFSSGPIIAMVWEGKDAIKTGRVLLGATNPAAAVPGTIRGDMAISVGRNICHGSDGPESAVHEIGNWFTEAEISDYTRSLDEW 226 A + + VPH G GT KERTFIAIKPDGV RGLIA IIARFE KGFKLVG+K++ PT+ A HY DL +PFF LV YF+SGP++AMVWEGKD I TGR L+GATNPA A GTIRGD I +GRNI HGSDG +SA HEI WF E EI+D+ ++ +W Sbjct: 68 ATVEAAETSSVPHYGAAGTQKERTFIAIKPDGVNRGLIADIIARFEKKGFKLVGLKLVHPTEDFAAEHYDDLKARPFFPALVKYFASGPVVAMVWEGKDVILTGRKLIGATNPADAAVGTIRGDYCIIMGRNIIHGSDGADSAKHEISLWFKENEIADWESAVHKW 233 The following BLAST results are available for this feature:
BLAST of NO08G02940 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO08G02940 ID=NO08G02940|Name=NO08G02940|organism=Nannochloropsis oceanica|type=gene|length=2466bpback to top protein sequence of NO08G02940.1 >NO08G02940.1-protein ID=NO08G02940.1-protein|Name=NO08G02940.1|organism=Nannochloropsis oceanica|type=polypeptide|length=231bpback to top Synonyms
Publications
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