NO08G02930, NO08G02930 (gene) Nannochloropsis oceanica

Overview
NameNO08G02930
Unique NameNO08G02930
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1047
Alignment locationchr8:818674..819720 +

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Properties
Property NameValue
DescriptionArchease domain protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr8genomechr8:818674..819720 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR036820Archease_dom_sf
IPR023572Archease_dom
Homology
BLAST of NO08G02930 vs. NCBI_GenBank
Match: EWM26690.1 (Archease domain protein [Nannochloropsis gaditana])

HSP 1 Score: 315.5 bits (807), Expect = 1.600e-82
Identity = 172/263 (65.40%), Postives = 188/263 (71.48%), Query Frame = 0
Query:    1 MTDEWEPLPKRRKQKSYRQYPVIAENXXXXXXXXXXXXXXXXXXXXXXXXSAETPQLTRRAAPDKSQMQRVTAAVEERAAQHRPDRGEGMGNDGVAGEFYEYLDHTADVQLHAWGKNLKEAFEHIVPCMLNYMTDLSKVEVDPRLTQTFEVEGHDLSSLLFAWLDEVLFRFSSEAFVCKSVTILTFERPAAVMIGSAKDTPVGIAKVEGGERQGKYKIKVRAEGETFSLAKHPQGTEVKAITYSAMQIHEMEHRTDLYVIIDI 264
            M +EW+PLP+R  +K  R  P   EN                        S + PQ       D SQMQ+VTAAV  RAA+HRP+RGE MGNDGVAGEFYEYLDHTADVQLHAWGK+L  AFE+IVPCMLNYMTDLSKV+VDP  TQTFEVEGHDLSSLLFAWLDE LFRFSSEAFVCK   IL F RP      S+K T   + K+  GERQGKY IKV+AEGETF+L KHPQGTEVKAITYSAMQIHE E R DLYVIIDI
Sbjct:    1 MEEEWKPLPRRGTKKRRRVRP---EN--GGEGAPCQDTQEGHVKATCLGESGQPPQ----KPLDTSQMQQVTAAVRRRAAEHRPERGEDMGNDGVAGEFYEYLDHTADVQLHAWGKDLTHAFENIVPCMLNYMTDLSKVDVDPSQTQTFEVEGHDLSSLLFAWLDEFLFRFSSEAFVCKEAKILEFVRPLENANTSSKSTGGAVGKLNEGERQGKYTIKVQAEGETFTLTKHPQGTEVKAITYSAMQIHENEGRADLYVIIDI 254          
BLAST of NO08G02930 vs. NCBI_GenBank
Match: XP_004997297.1 (archease [Salpingoeca rosetta] >EGD80736.1 archease [Salpingoeca rosetta])

HSP 1 Score: 163.3 bits (412), Expect = 1.000e-36
Identity = 95/199 (47.74%), Postives = 117/199 (58.79%), Query Frame = 0
Query:   66 SQMQRVTAAVEERAAQHRPDRGEGMGNDGVAGEFYEYLDHTADVQLHAWGKNLKEAFEHIVPCMLNYMTDLSKVEVDPRLTQTFEVEGHDLSSLLFAWLDEVLFRFSSEAF-VCKSVTILTFERPAAVMIGSAKDTPVGIAKVEGGERQGKYKIKVRAEGETFSLAKHPQGTEVKAITYSAMQIHEMEHRTDLYVIIDI 264
            S+ + VTAA EE  A+              + + YEYLDHTAD+Q+HAWG +LKE+FE  V  M  YMT+L KV++D   T   EV G DL SLLFA LDE LFRFS+E F VCK V I+ F+                            +KI+VR  GE F LAKHPQGTE+KAITYS MQIH+ +   D+YVI+DI
Sbjct:    2 SEAKPVTAAAEEPKAE--------QDASAPSSKKYEYLDHTADIQVHAWGDSLKESFEQCVVAMFGYMTELDKVDIDTEKTSELEVSGTDLLSLLFALLDEFLFRFSAEDFLVCKRVEIVEFDTT-------------------------NWKIRVRGYGEPFDLAKHPQGTEIKAITYSNMQIHDDQPTHDVYVILDI 167          
BLAST of NO08G02930 vs. NCBI_GenBank
Match: PRW57244.1 (archease-like [Chlorella sorokiniana])

HSP 1 Score: 160.6 bits (405), Expect = 6.600e-36
Identity = 82/169 (48.52%), Postives = 108/169 (63.91%), Query Frame = 0
Query:   95 VAGEFYEYLDHTADVQLHAWGKNLKEAFEHIVPCMLNYMTDLSKVEVDPRLTQTFEVEGHDLSSLLFAWLDEVLFRFSSEAFVCKSVTILTFERPAAVMIGSAKDTPVGIAKVEGGERQGKYKIKVRAEGETFSLAKHPQGTEVKAITYSAMQIHEMEHRTDLYVIIDI 264
            V G+ +EYLDHTADVQLHAWG+ L+EAFE++  CM NYMT L  + +DP LT+T+E EGHDL SLLF +LDE+LF F++E FV K + I  F+R                           ++I    +GETF   +H  GTEVKAITYSAMQI+E +   +++VI+DI
Sbjct:  119 VNGQKFEYLDHTADVQLHAWGETLREAFENVGLCMFNYMTPLKGIGIDPALTRTYEAEGHDLQSLLFNFLDELLFAFATEFFVAKQLRITRFDR-------------------------DNWRIMAEGQGETFDRQRHVCGTEVKAITYSAMQINETQGDAEVFVIVDI 262          
BLAST of NO08G02930 vs. NCBI_GenBank
Match: XP_014245949.1 (protein archease isoform X1 [Cimex lectularius])

HSP 1 Score: 152.5 bits (384), Expect = 1.800e-33
Identity = 87/165 (52.73%), Postives = 101/165 (61.21%), Query Frame = 0
Query:  100 YEYLDHTADVQLHAWGKNLKEAFEHIVPCMLNYMTDLSKVEVDPRLTQTFEVEGHDLSSLLFAWLDEVLFRFSSEAFVCKSVTILT-FERPAAVMIGSAKDTPVGIAKVEGGERQGKYKIKVRAEGETFSLAKHPQGTEVKAITYSAMQIHEMEHRTDLYVIIDI 264
            YEYLDHTADVQLHAWGK+LKEAFE     M  Y+TDL  VE     TQT E EG DLSSLLF +LDE LF FS+E F    V ++T F R                          ++KIK    GETF++ KHPQG +VKAITYS MQIHE E + +L+VIIDI
Sbjct:   14 YEYLDHTADVQLHAWGKDLKEAFEQCAVAMFGYITDLEYVEFAE--TQTIEAEGEDLSSLLFHFLDEFLFMFSAEPFFIPRVVMITEFNRE-------------------------EFKIKAVGFGETFTIGKHPQGADVKAITYSNMQIHENEDKVELFVIIDI 151          
BLAST of NO08G02930 vs. NCBI_GenBank
Match: PSC70661.1 (archease-like [Micractinium conductrix])

HSP 1 Score: 152.5 bits (384), Expect = 1.800e-33
Identity = 79/169 (46.75%), Postives = 100/169 (59.17%), Query Frame = 0
Query:   95 VAGEFYEYLDHTADVQLHAWGKNLKEAFEHIVPCMLNYMTDLSKVEVDPRLTQTFEVEGHDLSSLLFAWLDEVLFRFSSEAFVCKSVTILTFERPAAVMIGSAKDTPVGIAKVEGGERQGKYKIKVRAEGETFSLAKHPQGTEVKAITYSAMQIHEMEHRTDLYVIIDI 264
            V G  +EYLDHTADVQLHAWG+ L EAFE+    M NYMT L  +  DP LT+ +E EGHDL SLLF +LDE+LF F++E FV K + I  F+                            ++I+   EGE F   +H  GTEVKAITYSAMQI+E     +++VI+DI
Sbjct:  115 VRGHKFEYLDHTADVQLHAWGQTLTEAFENCALAMFNYMTPLKGIGADPALTRRYEAEGHDLQSLLFNFLDELLFAFATEFFVAKQLRITRFDXXXXXXXXXXXXXXXXXXXXXXXXXXXXWRIEAEGEGEKFDRERHASGTEVKAITYSAMQINEKPGDAEVFVIVDI 283          
BLAST of NO08G02930 vs. NCBI_GenBank
Match: XP_001743676.1 (hypothetical protein, partial [Monosiga brevicollis MX1] >EDQ91254.1 predicted protein, partial [Monosiga brevicollis MX1])

HSP 1 Score: 152.1 bits (383), Expect = 2.300e-33
Identity = 81/162 (50.00%), Postives = 99/162 (61.11%), Query Frame = 0
Query:  103 LDHTADVQLHAWGKNLKEAFEHIVPCMLNYMTDLSKVEVDPRLTQTFEVEGHDLSSLLFAWLDEVLFRFSSE-AFVCKSVTILTFERPAAVMIGSAKDTPVGIAKVEGGERQGKYKIKVRAEGETFSLAKHPQGTEVKAITYSAMQIHEMEHRTDLYVIIDI 264
            LDHTAD+Q+HAWG+ LK++FE  V  M  YMT+L  +E+D   T  F VEGHDL SLL+A LDE LFRFS+E   VC+ V I+ F+                            +KI VR +GE F LAKHPQGTE+KAITYS MQIH      D+YVI+DI
Sbjct:    1 LDHTADIQVHAWGQTLKDSFEQTVVAMFGYMTELDAIEIDDSQTSEFSVEGHDLMSLLYALLDEFLFRFSAEDNLVCREVEIVEFD-------------------------TDNFKITVRGKGEVFDLAKHPQGTEIKAITYSNMQIHTERATHDVYVILDI 137          
BLAST of NO08G02930 vs. NCBI_GenBank
Match: XP_009035631.1 (hypothetical protein AURANDRAFT_16246, partial [Aureococcus anophagefferens] >EGB09577.1 hypothetical protein AURANDRAFT_16246, partial [Aureococcus anophagefferens])

HSP 1 Score: 149.8 bits (377), Expect = 1.200e-32
Identity = 73/164 (44.51%), Postives = 102/164 (62.20%), Query Frame = 0
Query:  100 YEYLDHTADVQLHAWGKNLKEAFEHIVPCMLNYMTDLSKVEVDPRLTQTFEVEGHDLSSLLFAWLDEVLFRFSSEAFVCKSVTILTFERPAAVMIGSAKDTPVGIAKVEGGERQGKYKIKVRAEGETFSLAKHPQGTEVKAITYSAMQIHEMEHRTDLYVIIDI 264
            +E+LDHTADVQ HAWG ++  A  ++  C  +Y+T+L  ++VDP   Q FEV G D+   +F +LDE+L+RF+++   C+SV +   +RPAA                   +  G +   V   GE F LAKHPQGTEVKAITYSAMQIHE + + +L+VI+DI
Sbjct:    1 WEHLDHTADVQFHAWGADMDAALANLGMCFFDYVTELGAIDVDPDCAQAFEVTGVDMHKFVFRFLDELLYRFAADGVACRSVAVRLTQRPAA-------------------DGSGHFVASVTTAGEKFDLAKHPQGTEVKAITYSAMQIHENDDKAELFVIVDI 145          
BLAST of NO08G02930 vs. NCBI_GenBank
Match: XP_019615670.1 (PREDICTED: protein archease-like [Branchiostoma belcheri])

HSP 1 Score: 149.4 bits (376), Expect = 1.500e-32
Identity = 93/201 (46.27%), Postives = 117/201 (58.21%), Query Frame = 0
Query:   64 DKSQMQRVTAAVEERAAQHRPDRGEGMGNDGVAGEFYEYLDHTADVQLHAWGKNLKEAFEHIVPCMLNYMTDLSKVEVDPRLTQTFEVEGHDLSSLLFAWLDEVLFRFSSEA-FVCKSVTILTFERPAAVMIGSAKDTPVGIAKVEGGERQGKYKIKVRAEGETFSLAKHPQGTEVKAITYSAMQIHEMEHRTDLYVIIDI 264
            DKS+++     +EE  A++ P   E  G D V    YEYLDHTADVQLH+WG++LKEAFE     M  YMT++  VE  P  T   E EG D+ SLL+ +LDE LF FS+E  F+ + V I+ F+R                           +KIK    GETF L+KHPQGTEVKAITYSAMQIHE     D+YV++DI
Sbjct:   50 DKSRLK-----MEEEEAEYDP---EWEGGDYVCK--YEYLDHTADVQLHSWGEDLKEAFEQCAVGMFGYMTEIETVE--PLDTHEIEAEGDDMESLLYQFLDEWLFAFSAEPFFIARDVKIVEFDRE-------------------------NFKIKSVGYGETFDLSKHPQGTEVKAITYSAMQIHEEVETNDVYVVLDI 213          
BLAST of NO08G02930 vs. NCBI_GenBank
Match: XP_015928388.1 (protein archease-like [Parasteatoda tepidariorum])

HSP 1 Score: 149.1 bits (375), Expect = 2.000e-32
Identity = 79/165 (47.88%), Postives = 103/165 (62.42%), Query Frame = 0
Query:  100 YEYLDHTADVQLHAWGKNLKEAFEHIVPCMLNYMTDLSKVEVDPRLTQTFEVEGHDLSSLLFAWLDEVLFRFSSEA-FVCKSVTILTFERPAAVMIGSAKDTPVGIAKVEGGERQGKYKIKVRAEGETFSLAKHPQGTEVKAITYSAMQIHEMEHRTDLYVIIDI 264
            YEYLDH ADVQLH+WG  ++EAFE I   M  YMT++  V++   ++Q  E EGHD+ SLLF +LDE L+ FS+E  F+ + V IL+F+R                           +K++ R  GE F L KHPQGTEVKAITYS MQ+HE E +T+L+VIIDI
Sbjct:   35 YEYLDHPADVQLHSWGSTIEEAFEQIAVSMFGYMTEIETVDI--TMSQDIEAEGHDMLSLLFHFLDEFLYIFSAEPYFIARKVKILSFDR-------------------------ANFKVRARGYGEIFDLDKHPQGTEVKAITYSNMQVHENEGKTELFVIIDI 172          
BLAST of NO08G02930 vs. NCBI_GenBank
Match: XP_021948810.1 (protein archease-like [Folsomia candida] >OXA56735.1 Protein archease [Folsomia candida])

HSP 1 Score: 149.1 bits (375), Expect = 2.000e-32
Identity = 81/165 (49.09%), Postives = 101/165 (61.21%), Query Frame = 0
Query:  100 YEYLDHTADVQLHAWGKNLKEAFEHIVPCMLNYMTDLSKVEVDPRLTQTFEVEGHDLSSLLFAWLDEVLFRFSSEA-FVCKSVTILTFERPAAVMIGSAKDTPVGIAKVEGGERQGKYKIKVRAEGETFSLAKHPQGTEVKAITYSAMQIHEMEHRTDLYVIIDI 264
            YEYLDHTADVQ+HAWG NL+EAFE     M  YMTD+    VD + TQT E  GHD+ SLLF +LDE LF F+++  F+ + +TI +F+R                           +KIK    GETF ++KHPQGTEVKAITYS MQ HE E   +++VIIDI
Sbjct:   66 YEYLDHTADVQIHAWGFNLQEAFEQCAMGMFGYMTDID--TVDNKGTQTIEANGHDMLSLLFGFLDEFLFIFNADPFFIARKITITSFDR-------------------------DNFKIKAVGHGETFDISKHPQGTEVKAITYSNMQFHEAEDYAEVFVIIDI 203          
The following BLAST results are available for this feature:
BLAST of NO08G02930 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM26690.11.600e-8265.40Archease domain protein [Nannochloropsis gaditana][more]
XP_004997297.11.000e-3647.74archease [Salpingoeca rosetta] >EGD80736.1 archeas... [more]
PRW57244.16.600e-3648.52archease-like [Chlorella sorokiniana][more]
XP_014245949.11.800e-3352.73protein archease isoform X1 [Cimex lectularius][more]
PSC70661.11.800e-3346.75archease-like [Micractinium conductrix][more]
XP_001743676.12.300e-3350.00hypothetical protein, partial [Monosiga brevicolli... [more]
XP_009035631.11.200e-3244.51hypothetical protein AURANDRAFT_16246, partial [Au... [more]
XP_019615670.11.500e-3246.27PREDICTED: protein archease-like [Branchiostoma be... [more]
XP_015928388.12.000e-3247.88protein archease-like [Parasteatoda tepidariorum][more]
XP_021948810.12.000e-3249.09protein archease-like [Folsomia candida] >OXA56735... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL109nonsL109Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
nonsL108nonsL108Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR083ncniR083Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR141ngnoR141Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR140ngnoR140Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK008747NSK008747Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO08G02930.1NO08G02930.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|582814gene_3625Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100001g190gene3784Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO08G02930.1NO08G02930.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO08G02930 ID=NO08G02930|Name=NO08G02930|organism=Nannochloropsis oceanica|type=gene|length=1047bp
TGTTTCTTTGTTGCTCTCCGAGCTTGTGCTCTGCTGATTTAATGAGCTGG
CCCTGCGATAACGGGCGGAGGAGCTCTGTTCTCGCTCTCTGCTTTTCTAA
CTAGCTAAAAATACATAACGCCACTGGCGCATTCAAGCGAGTGAAACGCG
CCTTGCAGGGCGCCGCCTCCCAAACCAACCTCCTCACCCACCAAACCACC
CAACCCATCTACCCCTACAAAGAGATTCCCATGACAGACGAATGGGAACC
TCTACCCAAGCGGCGCAAACAGAAGAGCTATCGACAGTACCCTGTCATTG
CCGAGAATGCGCCACAGCCACCCGAACAGCAGCAGCAACAACAGGAGCCC
CAACAGCCCAATCACCTGGAGGAGGAGGCATCGGCCGAGACACCACAGCT
GACCCGTCGCGCCGCACCCGACAAGTCGCAGATGCAGAGAGTGACGGCCG
CTGTAGAGGAGCGGGCAGCACAACACCGCCCTGATCGGGGAGAAGGCATG
GGTAATGACGGCGTTGCTGGTGAGTTTTACGAGTACTTGGATCATACGGC
GGACGTGCAGCTCCATGCGTGGGGCAAGAACCTGAAGGAGGCATTTGAGC
ATATTGTGCCGTGCATGCTGAATTACATGACGGACCTGTCCAAGGTCGAA
GTGGACCCCAGGCTCACACAGACGTTTGAGGTAGAGGGTCATGACTTGTC
CTCCTTGCTCTTTGCCTGGTTGGATGAGGTTTTGTTTCGGTTTAGCTCCG
AAGCGTTCGTGTGCAAGTCGGTCACCATCCTGACTTTCGAACGCCCTGCT
GCTGTGATGATAGGTTCGGCCAAAGACACTCCTGTGGGGATCGCCAAGGT
CGAAGGTGGAGAAAGACAAGGGAAGTACAAGATTAAGGTAAGGGCGGAGG
GGGAGACGTTCAGCCTGGCTAAGCATCCGCAGGGGACGGAGGTAAAAGCA
ATTACTTATTCGGCAATGCAGATCCACGAGATGGAGCATAGAACAGATCT
GTACGTCATAATCGACATTTGAAAGAAAGTAAAAAGAAACGCCAAGA
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protein sequence of NO08G02930.1

>NO08G02930.1-protein ID=NO08G02930.1-protein|Name=NO08G02930.1|organism=Nannochloropsis oceanica|type=polypeptide|length=264bp
MTDEWEPLPKRRKQKSYRQYPVIAENAPQPPEQQQQQQEPQQPNHLEEEA
SAETPQLTRRAAPDKSQMQRVTAAVEERAAQHRPDRGEGMGNDGVAGEFY
EYLDHTADVQLHAWGKNLKEAFEHIVPCMLNYMTDLSKVEVDPRLTQTFE
VEGHDLSSLLFAWLDEVLFRFSSEAFVCKSVTILTFERPAAVMIGSAKDT
PVGIAKVEGGERQGKYKIKVRAEGETFSLAKHPQGTEVKAITYSAMQIHE
MEHRTDLYVIIDI*
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Synonyms
Publications