NO08G02920, NO08G02920 (gene) Nannochloropsis oceanica

Overview
NameNO08G02920
Unique NameNO08G02920
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1888
Alignment locationchr8:816786..818673 +

Link to JBrowse

Properties
Property NameValue
DescriptionN-terminal acetyltransferase complex ard1 subunit
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr8genomechr8:816786..818673 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR016181Acyl_CoA_acyltransferase
IPR000182GNAT_dom
Vocabulary: Molecular Function
TermDefinition
GO:0016740transferase activity
Homology
[Close]
BLAST of NO08G02920 vs. NCBI_GenBank
Match: EWM26660.1 (n-terminal acetyltransferase complex ard1 subunit [Nannochloropsis gaditana])

HSP 1 Score: 170.2 bits (430), Expect = 6.600e-39
Identity = 80/90 (88.89%), Postives = 87/90 (96.67%), Query Frame = 0 
Query:   37 EEDAAVPHGHITSLAVLRTHRKCGIATKLMQASQRCMLETFDAQYVSLHVRKSNRAAIHLYTRTLGYDVNDEEKGYYADGEDAYDMRKYL 127
            EEDAAVPHGHITSLAVLRT+RKCGIAT+LMQASQRCM ETF+AQYVSLHVRKSN AAIHLYT+TLGY+++DEEK YYADGEDAYDMRKYL
Sbjct:   62 EEDAAVPHGHITSLAVLRTYRKCGIATRLMQASQRCMAETFEAQYVSLHVRKSNSAAIHLYTKTLGYEIHDEEKAYYADGEDAYDMRKYL 151
[Close]
BLAST of NO08G02920 vs. NCBI_GenBank
Match: GAX95406.1 (Hypothetical protein PINS_003292 [Pythium insidiosum])

HSP 1 Score: 147.1 bits (370), Expect = 5.900e-32
Identity = 70/88 (79.55%), Postives = 79/88 (89.77%), Query Frame = 0 
Query:   37 EEDAAVPHGHITSLAVLRTHRKCGIATKLMQASQRCMLETFDAQYVSLHVRKSNRAAIHLYTRTLGYDVNDEEKGYYADGEDAYDMRK 125
            EE+A+VPHGHITSLAVLRTHRKCGIATKLM+A+QR M+E F+A+YVSLHVR+ N AAIHLY +TL Y V D EKGYYADGEDAYDMRK
Sbjct:   62 EEEASVPHGHITSLAVLRTHRKCGIATKLMKAAQRAMVENFNAEYVSLHVREGNAAAIHLYRKTLEYQVYDIEKGYYADGEDAYDMRK 149
[Close]
BLAST of NO08G02920 vs. NCBI_GenBank
Match: XP_009534860.1 (hypothetical protein PHYSODRAFT_564396 [Phytophthora sojae] >EGZ09999.1 hypothetical protein PHYSODRAFT_564396 [Phytophthora sojae])

HSP 1 Score: 144.8 bits (364), Expect = 3.000e-31
Identity = 69/87 (79.31%), Postives = 78/87 (89.66%), Query Frame = 0 
Query:   37 EEDAAVPHGHITSLAVLRTHRKCGIATKLMQASQRCMLETFDAQYVSLHVRKSNRAAIHLYTRTLGYDVNDEEKGYYADGEDAYDMR 124
            EE+A+VPHGHITSLAVLRTHRKCG+ATKLMQA+QR M+E+F A+YVSLHVR+ N AAIHLY +TL Y V D EKGYYADGEDAYDMR
Sbjct:   62 EEEASVPHGHITSLAVLRTHRKCGLATKLMQAAQRAMVESFGAEYVSLHVREGNVAAIHLYRKTLKYQVYDIEKGYYADGEDAYDMR 148
[Close]
BLAST of NO08G02920 vs. NCBI_GenBank
Match: XP_009824365.1 (hypothetical protein H257_02433 [Aphanomyces astaci] >ETV85893.1 hypothetical protein H257_02433 [Aphanomyces astaci])

HSP 1 Score: 144.8 bits (364), Expect = 3.000e-31
Identity = 69/87 (79.31%), Postives = 77/87 (88.51%), Query Frame = 0 
Query:   37 EEDAAVPHGHITSLAVLRTHRKCGIATKLMQASQRCMLETFDAQYVSLHVRKSNRAAIHLYTRTLGYDVNDEEKGYYADGEDAYDMR 124
            EEDA+VPHGHITSLAVLRTHRKCGIATKLM+A+QR M+E F A+YVSLHVR++N AA HLY +TL Y V D EKGYYADGEDAYDMR
Sbjct:   62 EEDASVPHGHITSLAVLRTHRKCGIATKLMKAAQRAMVENFKAEYVSLHVRETNAAAFHLYRKTLEYQVYDIEKGYYADGEDAYDMR 148
[Close]
BLAST of NO08G02920 vs. NCBI_GenBank
Match: XP_008863998.1 (hypothetical protein H310_02313 [Aphanomyces invadans] >ETW07905.1 hypothetical protein H310_02313 [Aphanomyces invadans])

HSP 1 Score: 144.1 bits (362), Expect = 5.000e-31
Identity = 69/87 (79.31%), Postives = 75/87 (86.21%), Query Frame = 0 
Query:   37 EEDAAVPHGHITSLAVLRTHRKCGIATKLMQASQRCMLETFDAQYVSLHVRKSNRAAIHLYTRTLGYDVNDEEKGYYADGEDAYDMR 124
            EEDA VPHGHITSLAVLRTHRKCGIATKLM+A+QR M+E F A+YVSLHVR+ N AA HLY +TL Y V D EKGYYADGEDAYDMR
Sbjct:   62 EEDATVPHGHITSLAVLRTHRKCGIATKLMKAAQRAMVENFKAEYVSLHVREGNAAAFHLYRKTLEYQVYDIEKGYYADGEDAYDMR 148
[Close]
BLAST of NO08G02920 vs. NCBI_GenBank
Match: XP_008604270.1 (glycerol kinase [Saprolegnia diclina VS20] >XP_012201315.1 hypothetical protein SPRG_07128 [Saprolegnia parasitica CBS 223.65] >EQC42847.1 glycerol kinase [Saprolegnia diclina VS20] >KDO27855.1 hypothetical protein SPRG_07128 [Saprolegnia parasitica CBS 223.65])

HSP 1 Score: 143.7 bits (361), Expect = 6.600e-31
Identity = 69/87 (79.31%), Postives = 76/87 (87.36%), Query Frame = 0 
Query:   37 EEDAAVPHGHITSLAVLRTHRKCGIATKLMQASQRCMLETFDAQYVSLHVRKSNRAAIHLYTRTLGYDVNDEEKGYYADGEDAYDMR 124
            EE+A VPHGHITSLAVLRTHRKCGIATKLM+A+QR M+E+F A+YVSLHVR+ N AAIHLY  TL Y V D EKGYYADGEDAYDMR
Sbjct:   62 EEEATVPHGHITSLAVLRTHRKCGIATKLMKAAQRAMVESFKAEYVSLHVREGNAAAIHLYRHTLKYQVYDIEKGYYADGEDAYDMR 148
[Close]
BLAST of NO08G02920 vs. NCBI_GenBank
Match: OQR83850.1 (N-terminal acetyltransferase complex ARD1 subunit [Achlya hypogyna])

HSP 1 Score: 143.7 bits (361), Expect = 6.600e-31
Identity = 69/87 (79.31%), Postives = 76/87 (87.36%), Query Frame = 0 
Query:   37 EEDAAVPHGHITSLAVLRTHRKCGIATKLMQASQRCMLETFDAQYVSLHVRKSNRAAIHLYTRTLGYDVNDEEKGYYADGEDAYDMR 124
            EE+A VPHGHITSLAVLRTHRKCGIATKLM+A+QR M+E+F A+YVSLHVR+ N AAIHLY  TL Y V D EKGYYADGEDAYDMR
Sbjct:   62 EEEATVPHGHITSLAVLRTHRKCGIATKLMKAAQRAMVESFKAEYVSLHVREGNAAAIHLYRHTLKYQVYDIEKGYYADGEDAYDMR 148
[Close]
BLAST of NO08G02920 vs. NCBI_GenBank
Match: OQR90245.1 (N-terminal acetyltransferase complex ARD1 subunit [Thraustotheca clavata])

HSP 1 Score: 143.7 bits (361), Expect = 6.600e-31
Identity = 69/87 (79.31%), Postives = 76/87 (87.36%), Query Frame = 0 
Query:   37 EEDAAVPHGHITSLAVLRTHRKCGIATKLMQASQRCMLETFDAQYVSLHVRKSNRAAIHLYTRTLGYDVNDEEKGYYADGEDAYDMR 124
            EE+A VPHGHITSLAVLRTHRKCGIATKLM+A+QR M+E+F A+YVSLHVR+ N AAIHLY  TL Y V D EKGYYADGEDAYDMR
Sbjct:   62 EEEATVPHGHITSLAVLRTHRKCGIATKLMKAAQRAMVESFKAEYVSLHVREGNAAAIHLYRHTLKYQVYDIEKGYYADGEDAYDMR 148
[Close]
BLAST of NO08G02920 vs. NCBI_GenBank
Match: CCI42431.1 (unnamed protein product [Albugo candida])

HSP 1 Score: 143.3 bits (360), Expect = 8.600e-31
Identity = 69/88 (78.41%), Postives = 76/88 (86.36%), Query Frame = 0 
Query:   37 EEDAAVPHGHITSLAVLRTHRKCGIATKLMQASQRCMLETFDAQYVSLHVRKSNRAAIHLYTRTLGYDVNDEEKGYYADGEDAYDMRK 125
            EE+A+VPHGHITSLAVLRTHRKCGIAT LM+A+QR M+E F A+YVSLHVR+SN AAIHLY  TL Y V D E GYYADGEDAYDMRK
Sbjct:  381 EEEASVPHGHITSLAVLRTHRKCGIATNLMKAAQRAMVENFAAEYVSLHVRESNEAAIHLYRHTLQYQVYDIESGYYADGEDAYDMRK 468
[Close]
BLAST of NO08G02920 vs. NCBI_GenBank
Match: CCI42432.1 (unnamed protein product [Albugo candida])

HSP 1 Score: 143.3 bits (360), Expect = 8.600e-31
Identity = 69/88 (78.41%), Postives = 76/88 (86.36%), Query Frame = 0 
Query:   37 EEDAAVPHGHITSLAVLRTHRKCGIATKLMQASQRCMLETFDAQYVSLHVRKSNRAAIHLYTRTLGYDVNDEEKGYYADGEDAYDMRK 125
            EE+A+VPHGHITSLAVLRTHRKCGIAT LM+A+QR M+E F A+YVSLHVR+SN AAIHLY  TL Y V D E GYYADGEDAYDMRK
Sbjct:  372 EEEASVPHGHITSLAVLRTHRKCGIATNLMKAAQRAMVENFAAEYVSLHVRESNEAAIHLYRHTLQYQVYDIESGYYADGEDAYDMRK 459
The following BLAST results are available for this feature:
BLAST of NO08G02920 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM26660.16.600e-3988.89n-terminal acetyltransferase complex ard1 subunit ... [more]
GAX95406.15.900e-3279.55Hypothetical protein PINS_003292 [Pythium insidios... [more]
XP_009534860.13.000e-3179.31hypothetical protein PHYSODRAFT_564396 [Phytophtho... [more]
XP_009824365.13.000e-3179.31hypothetical protein H257_02433 [Aphanomyces astac... [more]
XP_008863998.15.000e-3179.31hypothetical protein H310_02313 [Aphanomyces invad... [more]
XP_008604270.16.600e-3179.31glycerol kinase [Saprolegnia diclina VS20] >XP_012... [more]
OQR83850.16.600e-3179.31N-terminal acetyltransferase complex ARD1 subunit ... [more]
OQR90245.16.600e-3179.31N-terminal acetyltransferase complex ARD1 subunit ... [more]
CCI42431.18.600e-3178.41unnamed protein product [Albugo candida][more]
CCI42432.18.600e-3178.41unnamed protein product [Albugo candida][more]

Pages

back to top
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL109nonsL109Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
nonsL108nonsL108Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR083ncniR083Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR141ngnoR141Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR140ngnoR140Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK008745NSK008745Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO08G02920.1NO08G02920.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide
NO08G02920.2NO08G02920.2-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|582811gene_3624Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100001g191gene3783Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO08G02920.1NO08G02920.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA
NO08G02920.2NO08G02920.2Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO08G02920 ID=NO08G02920|Name=NO08G02920|organism=Nannochloropsis oceanica|type=gene|length=1888bp
GCGTGGCCTCTTGCGTGTGCCTGTCATGTGGAGGGTTCATTGGATGAGTG
AGAATCGCGCTGGGCTTGAGGTTTAAGTGAAGTGTTGCATGCTGCCGTTG
CTCCGAGGAGTCCTATGCGTATGGACACAGTTTGATGCAGGCAACCCTCC
TCGATATTACGATTATCTTACTTCCTATCACTGTACAGACAAGAGCAGCA
ATAAGACTGTCACCGTATCCAAGCCCTGAGATGGTTGACAGGCTGCGAGA
TCATGTTCTTTTGGCGTCGTCCTCAGTCCGCCACTGAGCGACCTCCCTCC
TCTTCCTCTCGCCCTCCTCCCCCTTCTTTCTACCTTCCAGTCCGCATCCC
ATTGGAAGCCACTTCCACGCCCAGCACTTATCTCCATCTGCAATTCCACC
TCTCACGCATATTTACAGCACCCGCCCAATCCTAACCACTCAACGATGGT
CTGCATCCGGCAGGCTAAAGCAGAGGACCTGCTGCAGATTCAGGCCGCCA
ACCTCTGGTGCTTGCCCGAGAACTACCAAATGAAGTACTATTTCTACCAT
ATCCTGTCCTGGCCCCAACTACTGTACGTGGCCGAAGATCACCGTCGGCG
CATCGTGGGCTATGTTCTCGCCAAGATGTATGTATGGACGAGAGAGAGGT
GATGAGGGAGATGGGAGACGCTACTCGCCGGCTTACCCAATACACACGCG
CTAATGTATGTCGTTCACTTTCTGTGGACATGACACCTAGGGAAGAGGAT
GCCGCCGTGCCGCATGGGCACATTACCTCGTTGGCCGTGTTACGAACGCA
TAGGAAGTGCGGCATTGCCACAAAATTGATGCAAGCGTCGCgtaagtcaa
ggaaagagggagagagagaaaaagggagggagacagtgcaggcaaggatg
cctcattttttgacattcgtgaatctacatattcatgttttctcacgtac
atatgcgtcttgtaacacagAACGCTGCATGTTGGAGACCTTCGACGCCC
AGTACGTGTCACTGCACGTGCGCAAGAGCAACCGGGCCGCCATCCACCTC
TACACCCGGACGCTAGGCTACGAgtacgtgatgtttggattatagggagg
aagcgggtgtgagggagtggcgcgggagggaggaaatagggtacatggtt
attcgttaggcagtgcgtgagtttgtgatggctgcggtgaacgggcggat
cgaacggagcatcttgaacgggggcagcatgtctgcaacttagtgtctga
ctttccttgacatgtgagtactcaccatgatttccctaccactttacagT
GTCAACGATGAGGAGAAGGGCTACTATGCCGACGGGGAGGATGCATgtac
gtacactactagatgggttttgtgggttactcactcgttcttaatttgac
acaagttaatttccaatctccctatcaccacgcagACGATATGCGCAAAT
ACCTCCAGACTAAGGAAGTTCCCATTTCATCCGTGCCCGTCTCCTCCAGT
CCATCTTCGTCGCCCACGGACGCGTCCAATGATGCATCTGCCACAGACGG
CACAGCAGCCGGGACTACCAGTACACCAACGCAACATCAAAGTAAGGGAA
TGGAGTTCATTGCAGAGGATGTGACGGAAAAGCTAGGCAAGATGAGCTTG
AGAGTAGAAGAGATGACCGGAGATAAGCAACCCGATGGAAAAGAGAGCTA
GCTATGAGAAGGTGAGGGAAGGAGGGGAGAGAGGGAAGGAGAGAGGGAGA
GAGAAGGGCAGGAGAAAAAAAGGAGAGAGGCTCGAATCATCCGCTAGCTA
CCACAAATGTAGACACAGTCTCTGCTTCGGCAAAAATAGAAACGAATGCG
TTGTTGAGGCAACTCGTCAGAAATCGCAACTGGAGCGA
back to top

protein sequence of NO08G02920.1

>NO08G02920.1-protein ID=NO08G02920.1-protein|Name=NO08G02920.1|organism=Nannochloropsis oceanica|type=polypeptide|length=233bp
MVCIRQAKAEDLLQIQAANLWCLPENYQMKYYFYHILSWPQLLYVAEDHR
RRIVGYVLAKMEEDAAVPHGHITSLAVLRTHRKCGIATKLMQASQRCMLE
TFDAQYVSLHVRKSNRAAIHLYTRTLGYDVNDEEKGYYADGEDAYDMRKY
LQTKEVPISSVPVSSSPSSSPTDASNDASATDGTAAGTTSTPTQHQSKGM
EFIAEDVTEKLGKMSLRVEEMTGDKQPDGKES*
back to top

protein sequence of NO08G02920.2

>NO08G02920.2-protein ID=NO08G02920.2-protein|Name=NO08G02920.2|organism=Nannochloropsis oceanica|type=polypeptide|length=208bp
MDEREVMREMGDATRRLTQYTRANVCRSLSVDMTPREEDAAVPHGHITSL
AVLRTHRKCGIATKLMQASQRCMLETFDAQYVSLHVRKSNRAAIHLYTRT
LGYDVNDEEKGYYADGEDAYDMRKYLQTKEVPISSVPVSSSPSSSPTDAS
NDASATDGTAAGTTSTPTQHQSKGMEFIAEDVTEKLGKMSLRVEEMTGDK
QPDGKES*
back to top
Synonyms
Publications