NO08G02910, NO08G02910 (gene) Nannochloropsis oceanica

Overview
NameNO08G02910
Unique NameNO08G02910
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2347
Alignment locationchr8:814877..817223 -

Link to JBrowse

Properties
Property NameValue
Description3-phosphoshikimate 1-carboxyvinyltransferase
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr8genomechr8:814877..817223 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
PXD0160542021-01-14
PXD0166992021-01-08
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
PXD0100302020-03-16
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
GO:0016765transferase activity, transferring alkyl or aryl (other than methyl) groups
GO:0016740transferase activity
Vocabulary: INTERPRO
TermDefinition
IPR013792RNA3'P_cycl/enolpyr_Trfase_a/b
IPR001986Enolpyruvate_Tfrase_dom
Vocabulary: Biological Process
TermDefinition
GO:0009987cellular process
GO:0009058biosynthetic process
Homology
BLAST of NO08G02910 vs. NCBI_GenBank
Match: XP_019151672.1 (PREDICTED: 3-phosphoshikimate 1-carboxyvinyltransferase 2-like [Ipomoea nil])

HSP 1 Score: 530.4 bits (1365), Expect = 6.100e-147
Identity = 291/470 (61.91%), Postives = 348/470 (74.04%), Query Frame = 0
Query:   58 TITTTSRIHLPQPLAAAGGTT---NERMEQMTLQPIKTFEGEIELPGSKSISNRILLLAALSQGTTVVDNLLQSEDIEYMLQALTTLGINL-ENTGDNQWTVPGRGAPF----DTTSPVDLFLGNAGTAMRPLTAALCA--GQGEFSLDGTPRMRERPISDLTDGLKQLGVDVTC-SDTGCPPVKIKAK-GLPGGSMRISGKISSQYLSALLMAAPLAKGDITIIISDELVSAPYVHMTIKLMQRFGVHVE-NDNDRTFTIRAGQTYRSPGQIFTEGDASSASYFLAGAAIAGGTVTVKGCGSESVQGDVYFATVLGMMGAQVDWTPNSITVSRKPGVV-----LKGIDVDCGAIPDAAMTLAIVALFADGPTAIRNVYNWRVKETERMRAIVTELTKLGATVEEGRDFCIVHPLKQLNANVAIDTYDDHRMAMCFSLAACGGVPVVINDPKCVRKTFPDYFERLAVMSK 510
            +I T +R  LP  + A+  TT   ++  E++ LQPIK   G ++LPGSKS+SNRILLLAALSQGTTV+DNLL S+DI YML AL TLG+ + E++   + T+ G G  F    ++T  + LFLGNAGTAMRPLTAA+ A  G   + LDG PRMRERPI DL +GLKQLG DV C   T CPPV++  K GLPGG++++SG +SSQYL+ALLMAAPLA GD+TI I D+L+S PYV MTIKLM+RFGV VE +D+   F IR GQ Y+SPG  F EGDASSASYFLAGAA+ GGTVTV+GCG+ S+QGDV FA VL  MGA+V WT NS+TV   P        L+ IDV+   +PD AMTLA+VALFADGPTAIR+V +WRVKETERM A+ TEL KLGATVEEG D+CI+ P ++LN    IDTYDDHRMAM FSLAAC  VPV I DP C RKTFPDYFE L   SK
Sbjct:   50 SIFTATR--LPLQVRASVATTKKPSKAPEEIVLQPIKEISGTVKLPGSKSLSNRILLLAALSQGTTVIDNLLSSDDIHYMLGALRTLGLRVEEDSAIQRATIEGSGGLFPASKESTDEIQLFLGNAGTAMRPLTAAVVAAGGNARYVLDGVPRMRERPIGDLVEGLKQLGADVDCFLGTNCPPVRVIGKGGLPGGTVKLSGSVSSQYLTALLMAAPLALGDVTIEIVDKLISVPYVEMTIKLMERFGVSVEHSDSWDRFLIRGGQKYKSPGNAFVEGDASSASYFLAGAAVTGGTVTVEGCGTSSLQGDVKFAEVLEKMGAEVSWTENSVTVKGPPRAPSGRKHLRAIDVNMNKMPDVAMTLAVVALFADGPTAIRDVASWRVKETERMIAVCTELRKLGATVEEGPDYCIITPPERLNV-TEIDTYDDHRMAMAFSLAACAEVPVTIKDPGCTRKTFPDYFEVLQKFSK 516          
BLAST of NO08G02910 vs. NCBI_GenBank
Match: XP_010098925.1 (3-phosphoshikimate 1-carboxyvinyltransferase 2 [Morus notabilis] >EXB76227.1 3-phosphoshikimate 1-carboxyvinyltransferase [Morus notabilis])

HSP 1 Score: 529.6 bits (1363), Expect = 1.000e-146
Identity = 296/502 (58.96%), Postives = 354/502 (70.52%), Query Frame = 0
Query:   35 PTTTLSFVLPILPSSPPWGGLTT-----------TITTTSRIHLPQPLAA-AGGTTNERMEQMTLQPIKTFEGEIELPGSKSISNRILLLAALSQGTTVVDNLLQSEDIEYMLQALTTLGINLE-NTGDNQWTVPGRGAPF----DTTSPVDLFLGNAGTAMRPLTAA--LCAGQGEFSLDGTPRMRERPISDLTDGLKQLGVDVTC-SDTGCPPVKIKAK-GLPGGSMRISGKISSQYLSALLMAAPLAKGDITIIISDELVSAPYVHMTIKLMQRFGVHVEN-DNDRTFTIRAGQTYRSPGQIFTEGDASSASYFLAGAAIAGGTVTVKGCGSESVQGDVYFATVLGMMGAQVDWTPNSITVSRKP-----GVVLKGIDVDCGAIPDAAMTLAIVALFADGPTAIRNVYNWRVKETERMRAIVTELTKLGATVEEGRDFCIVHPLKQLNANVAIDTYDDHRMAMCFSLAACGGVPVVINDPKCVRKTFPDYFERLAVMSK 510
            P    SF   I   S  WG L++             T   R    Q +A+ A      ++ ++TLQPIK   G ++LPGSKS+SNRILLLAALS+GTTV+DNLL SEDI YML AL TLG+ +E + G  +  V G G  F    ++   + LFLGNAGTAMRPLTAA  +  G   + LDG PRMRERPI DL DGLKQLG DV C   T CPPV++ AK GLPGG +++SG +SSQYL+ALLMAAPLA GDI I I D+L+S PYV MT+KLM+RFGV VE+ D+   F +R GQ Y+SPG  + EGDASSASYFLAGAA+ GGTVTV+GCG+ S+QGDV FA VLG MGA+V WT NS+TV+  P        LK IDV+   +PD AMTLA+VALFADGPTAIR+V +WRVKETERM AI TEL KLGATVEEG D+C++ P ++LN   AIDTYDDHRMAM FSLAACG VPV I DP C RKTFPDYF+ L + +K
Sbjct:   24 PHKPRSFSSSISLRSKLWGSLSSLSLKLDNNFVGCCTAGGRAMAGQVMASVATAEKPSKVPEITLQPIKDISGTVKLPGSKSLSNRILLLAALSEGTTVLDNLLDSEDIHYMLGALKTLGLRVEADKGTKRAIVEGSGGQFPVGNESKDEIQLFLGNAGTAMRPLTAAVTVAGGNSSYVLDGVPRMRERPIGDLVDGLKQLGADVDCFLGTNCPPVRVIAKGGLPGGKVKLSGSVSSQYLTALLMAAPLALGDIEIEIVDKLISIPYVEMTLKLMERFGVSVEHTDSWDRFLVRGGQKYKSPGNAYVEGDASSASYFLAGAAVTGGTVTVEGCGTSSLQGDVKFAEVLGKMGAKVSWTENSVTVTGPPRDSSGRKHLKAIDVNMNKMPDVAMTLAVVALFADGPTAIRDVASWRVKETERMIAICTELRKLGATVEEGPDYCVITPPEKLN-TAAIDTYDDHRMAMAFSLAACGDVPVTIKDPGCTRKTFPDYFDVLKIFTK 524          
BLAST of NO08G02910 vs. NCBI_GenBank
Match: XP_002946713.1 (hypothetical protein VOLCADRAFT_79287 [Volvox carteri f. nagariensis] >EFJ51939.1 hypothetical protein VOLCADRAFT_79287 [Volvox carteri f. nagariensis])

HSP 1 Score: 528.9 bits (1361), Expect = 1.800e-146
Identity = 286/455 (62.86%), Postives = 341/455 (74.95%), Query Frame = 0
Query:   71 LAAAGGTTNERMEQMTLQPIKTFEGEIELPGSKSISNRILLLAALSQGTTVVDNLLQSEDIEYMLQALTTLGINL-ENTGDNQWTVPGRGAPFDTTSPVDLFLGNAGTAMRPLTAA-LCAGQGEFSLDGTPRMRERPISDLTDGLKQLGVDVTCS-DTGCPPVKIKAKGLPGGSMRISGKISSQYLSALLMAAPLA-----KGD-ITIIISDELVSAPYVHMTIKLMQRFGVHVEN-DNDRTFTIRAGQTYRSPGQIFTEGDASSASYFLAGAAIAGGTVTVKGCGSESVQGDVYFATVLGMMGAQVDWTPNSITVS--RKPGVVLKGIDVDCGAIPDAAMTLAIVALFADGPTAIRNVYNWRVKETERMRAIVTELTKLGATVEEGRDFCIVHP----LKQLNANVAIDTYDDHRMAMCFSLAACGGVPVVINDPKCVRKTFPDYFERLAVMSK 510
            + A    T E++E++TLQP+K  EG ++LPGSKS+SNRILLLAAL++GTT V NLL S+DI YM+ AL  L + L EN    +  V G G  F+ +S  +LFLGNAGTAMRPLTAA + AG+G+F LDG  RMRERPI DL DGL QLGVD  C+  TGCPPV++ + GLP G + +SGK+SSQYL+ALLMAAPLA      GD I III DELVS PYV MT+KLM+RFGV VE  D  +   I AGQ Y SPG+ + EGDASSASYFLAGA I GGT+TV+GCGS+S+QGDV FA V+G++GA+V+W+P SIT++     G  + GID DC  IPDAAMTLA+ ALFAD PTAIRNVYNWRVKETERM AIVTEL KLGATVEEGRD+CIV P    +  +  NVAIDTYDDHRMAM FSL A  GVPV+I DP C RKTFP YF+    ++K
Sbjct:   55 VVAFASATKEKVEELTLQPVKKIEGHVKLPGSKSLSNRILLLAALAEGTTSVKNLLDSDDIRYMVGALKALNVQLEENWETGEMVVHGCGGRFN-SSGAELFLGNAGTAMRPLTAAVVAAGRGKFVLDGVARMRERPIQDLVDGLVQLGVDAKCTLGTGCPPVEVNSNGLPTGKVYLSGKVSSQYLTALLMAAPLAVPGGPGGDAIEIIIKDELVSQPYVDMTVKLMERFGVRVERLDGLQHLRIPAGQRYVSPGEAYVEGDASSASYFLAGATITGGTITVEGCGSDSLQGDVRFAEVMGLLGAKVEWSPYSITITGPSASGQPITGIDHDCNDIPDAAMTLAVAALFADRPTAIRNVYNWRVKETERMVAIVTELRKLGATVEEGRDYCIVTPPPGGVAGVKPNVAIDTYDDHRMAMAFSLVAAAGVPVIIRDPGCTRKTFPTYFKVFESVAK 508          
BLAST of NO08G02910 vs. NCBI_GenBank
Match: AFY09699.1 (chloroplast 5-enolpyruvylshikimate 3-phosphate synthase [Hevea brasiliensis])

HSP 1 Score: 528.1 bits (1359), Expect = 3.000e-146
Identity = 290/495 (58.59%), Postives = 355/495 (71.72%), Query Frame = 0
Query:   37 TTLSFVLPILPSSPPWGG------LTTTITTTSRIHL-PQPLAAAGGTTNERMEQMTLQPIKTFEGEIELPGSKSISNRILLLAALSQGTTVVDNLLQSEDIEYMLQALTTLGINLENTGD-NQWTVPGRGAPF----DTTSPVDLFLGNAGTAMRPLTAALCA--GQGEFSLDGTPRMRERPISDLTDGLKQLGVDVTCSDTGCPPVKIKAK-GLPGGSMRISGKISSQYLSALLMAAPLAKGDITIIISDELVSAPYVHMTIKLMQRFGVHVENDN--DRTFTIRAGQTYRSPGQIFTEGDASSASYFLAGAAIAGGTVTVKGCGSESVQGDVYFATVLGMMGAQVDWTPNSITVSRKP-----GVVLKGIDVDCGAIPDAAMTLAIVALFADGPTAIRNVYNWRVKETERMRAIVTELTKLGATVEEGRDFCIVHPLKQLNANVAIDTYDDHRMAMCFSLAACGGVPVVINDPKCVRKTFPDYFERLAVMSK 510
            +++SF   +  SS  WG         +T +T   + + P  ++A+  T  +   ++ LQPIK   G + LPGSKS+SNRILLLAALS+GTTVVDNLL S+D+ YML AL TLG+ +E+  +  Q  V G G  F    ++ + V+LFLGNAGTAMRPLTAA+ A  G   + LDG PRMRERPI DL  GLKQLG DV CSDT CPPV++  K GLPGG +++SG ISSQYL+ALLMAAPLA GD+ I I D+L+S PYV MT+KLM+R+GV +E+    DR F +R GQ Y+SPG  F EGDASSASYFLAGAAI GGT+TV+GCG+ S+QGDV FA VL  MGA+V WT NS+TV+  P        L+ IDV+   +PD AMTLA+VALFADGPTAIR+V +WRVKETERM AI TEL KLGA VEEG+D+C++ P ++L     IDTYDDHRMAM FSLAACG VPV I DP C RKTFPDYFE L   +K
Sbjct:   30 SSISFRSQLQGSSLSWGSKQCQRRADSTDSTVGTVKMSPVRVSASVATAEKSAPEIVLQPIKEISGTVYLPGSKSLSNRILLLAALSEGTTVVDNLLNSDDVRYMLGALRTLGLRVEDNSELKQAIVEGCGGHFPVGKESKNDVELFLGNAGTAMRPLTAAVTAAGGNSSYILDGVPRMRERPIGDLVAGLKQLGADVQCSDTNCPPVRVNGKGGLPGGKVKLSGSISSQYLTALLMAAPLALGDVEIEIIDKLISIPYVEMTLKLMERYGVTIEHSGSWDR-FFVRGGQKYKSPGNSFVEGDASSASYFLAGAAITGGTITVEGCGTSSLQGDVKFAEVLDKMGAKVTWTENSVTVTGPPRNSPSKKHLRAIDVNMNKMPDVAMTLAVVALFADGPTAIRDVASWRVKETERMIAICTELRKLGANVEEGQDYCVITPPEKLKV-AEIDTYDDHRMAMAFSLAACGDVPVTIKDPGCTRKTFPDYFEVLERFTK 522          
BLAST of NO08G02910 vs. NCBI_GenBank
Match: XP_019464186.1 (PREDICTED: 3-phosphoshikimate 1-carboxyvinyltransferase 2 [Lupinus angustifolius] >OIW00810.1 hypothetical protein TanjilG_08105 [Lupinus angustifolius])

HSP 1 Score: 527.3 bits (1357), Expect = 5.200e-146
Identity = 283/440 (64.32%), Postives = 332/440 (75.45%), Query Frame = 0
Query:   84 QMTLQPIKTFEGEIELPGSKSISNRILLLAALSQGTTVVDNLLQSEDIEYMLQALTTLGINLE-NTGDNQWTVPGRGAPFDT---TSPVDLFLGNAGTAMRPLTAALCA--GQGEFSLDGTPRMRERPISDLTDGLKQLGVDVTCS-DTGCPPVKIKAK-GLPGGSMRISGKISSQYLSALLMAAPLAKGDITIIISDELVSAPYVHMTIKLMQRFGVHVENDND-RTFTIRAGQTYRSPGQIFTEGDASSASYFLAGAAIAGGTVTVKGCGSESVQGDVYFATVLGMMGAQVDWTPNSITVSRKP-----GVVLKGIDVDCGAIPDAAMTLAIVALFADGPTAIRNVYNWRVKETERMRAIVTELTKLGATVEEGRDFCIVHPLKQLNANVAIDTYDDHRMAMCFSLAACGGVPVVINDPKCVRKTFPDYFERLAVMSK 510
            ++ L+PI+   G I LPGSKS+SNRILLLAALS+GTTVVDNLL SED+ YML AL TLG+N+E +    Q  V G G  F T      V+LFLGNAGTAMRPLTAA+ A  G   + LDG PRMRERPI DL  GLKQLG DV CS  T CPPV +  K GLPGG +++SG ISSQYL+ALLMAAPLA GD+ I I D+L+S PYV MT+KLM+RFGV VE+  D   F +R GQ Y+SPG  F EGDASSASYFLAGAA+ GGT+TV+GCG+ S+QGDV FA VL  MGA+V WT NS+TV+  P       VL+G+DV+   +PD AMTLA+VALFA+GPTAIR+V +WRVKETERM AI TELTKLGATVEEG D+CI+ P ++L    +IDTYDDHRMAM FSLAACG VPV INDP C RKTFPDYF+ L   +K
Sbjct:   85 EIVLEPIREISGTITLPGSKSLSNRILLLAALSEGTTVVDNLLNSEDVHYMLSALRTLGLNVEDDKTTKQAIVEGCGGLFPTEVSKDEVNLFLGNAGTAMRPLTAAVTAAGGNASYILDGVPRMRERPIGDLVAGLKQLGADVDCSLGTNCPPVHVNGKGGLPGGKVKLSGSISSQYLTALLMAAPLALGDVEIEIIDKLISVPYVEMTLKLMERFGVSVEHSGDWDRFLVRGGQKYKSPGNAFVEGDASSASYFLAGAAVTGGTITVQGCGTSSLQGDVKFAEVLEKMGAKVSWTENSVTVTGPPRDPSGRKVLQGVDVNMNKMPDVAMTLAVVALFANGPTAIRDVASWRVKETERMIAICTELTKLGATVEEGPDYCIITPPEKLKI-TSIDTYDDHRMAMAFSLAACGDVPVTINDPGCTRKTFPDYFQVLERFTK 523          
BLAST of NO08G02910 vs. NCBI_GenBank
Match: XP_021677878.1 (3-phosphoshikimate 1-carboxyvinyltransferase 2-like [Hevea brasiliensis])

HSP 1 Score: 527.3 bits (1357), Expect = 5.200e-146
Identity = 288/494 (58.30%), Postives = 353/494 (71.46%), Query Frame = 0
Query:   37 TTLSFVLPILPSSPPWGG------LTTTITTTSRIHL-PQPLAAAGGTTNERMEQMTLQPIKTFEGEIELPGSKSISNRILLLAALSQGTTVVDNLLQSEDIEYMLQALTTLGINLENTGD-NQWTVPGRGAPF----DTTSPVDLFLGNAGTAMRPLTAALCA--GQGEFSLDGTPRMRERPISDLTDGLKQLGVDVTCSDTGCPPVKIKAK-GLPGGSMRISGKISSQYLSALLMAAPLAKGDITIIISDELVSAPYVHMTIKLMQRFGVHVENDND-RTFTIRAGQTYRSPGQIFTEGDASSASYFLAGAAIAGGTVTVKGCGSESVQGDVYFATVLGMMGAQVDWTPNSITVSRKP-----GVVLKGIDVDCGAIPDAAMTLAIVALFADGPTAIRNVYNWRVKETERMRAIVTELTKLGATVEEGRDFCIVHPLKQLNANVAIDTYDDHRMAMCFSLAACGGVPVVINDPKCVRKTFPDYFERLAVMSK 510
            +++SF   +  SS  WG         +T +T   + + P  ++A+  T  +   ++ LQPIK   G + LPGSKS+SNRILLLAALS+GTTVVDNLL S+D+ YML AL TLG+ +E+  +  Q  V G G  F    ++ + V+LFLGNAGTAMRPLTAA+ A  G   + LDG PRMRERPI DL  GLKQLG DV CSDT CPPV++  K GLPGG +++SG ISSQYL+ALLMAAPLA GD+ I I D+L+S PYV MT+KLM+R+GV +E+      F +R GQ Y+SPG  F EGDASSASYFLAGAAI GGT+TV+GCG+ S+QGDV FA VL  MGA+V WT NS+TV+  P        L+ IDV+   +PD AMTLA+VALFADGPTAIR+V +WRVKETERM AI TEL KLGA VEEG+D+C++ P ++L     IDTYDDHRMAM FSLAACG VPV I DP C RKTFPDYFE L   +K
Sbjct:   30 SSISFRSQLQGSSLSWGSKQCQRRADSTDSTVGTVKMSPVRVSASVATAEKSAPEIVLQPIKEISGTVYLPGSKSLSNRILLLAALSEGTTVVDNLLNSDDVRYMLGALRTLGLRVEDNSELKQAIVEGCGGHFPVGKESKNDVELFLGNAGTAMRPLTAAVTAAGGNSSYILDGVPRMRERPIGDLVAGLKQLGADVQCSDTNCPPVRVNGKGGLPGGKVKLSGSISSQYLTALLMAAPLALGDVEIEIIDKLISIPYVEMTLKLMERYGVTIEHSGSWDHFFVRGGQKYKSPGNSFVEGDASSASYFLAGAAITGGTITVEGCGTSSLQGDVKFAEVLDKMGAKVTWTENSVTVTGPPRNSPSKKHLRAIDVNMNKMPDVAMTLAVVALFADGPTAIRDVASWRVKETERMIAICTELRKLGANVEEGQDYCVITPPEKLKV-AEIDTYDDHRMAMAFSLAACGDVPVTIKDPGCTRKTFPDYFEVLERFTK 522          
BLAST of NO08G02910 vs. NCBI_GenBank
Match: KXZ56795.1 (hypothetical protein GPECTOR_1g716 [Gonium pectorale])

HSP 1 Score: 526.9 bits (1356), Expect = 6.800e-146
Identity = 283/448 (63.17%), Postives = 339/448 (75.67%), Query Frame = 0
Query:   78 TNERMEQMTLQPIKTFEGEIELPGSKSISNRILLLAALSQGTTVVDNLLQSEDIEYMLQALTTLGINLENTGD-NQWTVPGRGAPFDTTSPVDLFLGNAGTAMRPLTAA-LCAGQGEFSLDGTPRMRERPISDLTDGLKQLGVDVTCS-DTGCPPVKIKAKGLPGGSMRISGKISSQYLSALLMAAPLA-----KGD-ITIIISDELVSAPYVHMTIKLMQRFGVHVEN-DNDRTFTIRAGQTYRSPGQIFTEGDASSASYFLAGAAIAGGTVTVKGCGSESVQGDVYFATVLGMMGAQVDWTPNSITVSRKP--GVVLKGIDVDCGAIPDAAMTLAIVALFADGPTAIRNVYNWRVKETERMRAIVTELTKLGATVEEGRDFCIVHP----LKQLNANVAIDTYDDHRMAMCFSLAACGGVPVVINDPKCVRKTFPDYFERLAVMSK 510
            T E++E++TLQP+K  EG ++LPGSKS+SNRILLLAAL++GTT+V NLL S+DI YM+ AL  L + LE   +  +  V G G  FD+    +LFLGNAGTAMRPLTAA + AG+G+F LDG  RMRERPI DL DGL QLGVD  C+  TGCPPV++ + GLP G + +SGK+SSQYL+ALLMAAPLA      GD I III DELVS PYV MT+KLM+RFGV VE  D  +   I AGQ Y SPG+ + EGDASSASYFLAGA I GGT+TV+GCGS+S+QGDV FA V+G++GA+V+W+P SIT++     G  + GID DC  IPDAAMTLA+ ALFAD PTAIRNVYNWRVKETERM AIVTEL KLGATVEEGRD+CI+ P    L  +  NVAIDTYDDHRMAM FSL +  GVPV+I DP C RKTFP YF+    ++K
Sbjct:   64 TKEKVEELTLQPVKKIEGTVKLPGSKSLSNRILLLAALAEGTTLVKNLLDSDDIRYMVGALKALNVKLEERWEVGEMVVHGCGGRFDSAG-AELFLGNAGTAMRPLTAAVVAAGRGKFVLDGVARMRERPIEDLVDGLVQLGVDAKCTLGTGCPPVEVNSNGLPTGKVYLSGKVSSQYLTALLMAAPLAVPGGPGGDAIEIIIKDELVSQPYVDMTVKLMERFGVKVERLDGLQHLRIPAGQRYLSPGEAYVEGDASSASYFLAGATITGGTITVEGCGSDSLQGDVRFAEVMGLLGAKVEWSPYSITITGPSAFGRPITGIDHDCNDIPDAAMTLAVAALFADRPTAIRNVYNWRVKETERMVAIVTELRKLGATVEEGRDYCIITPPPGGLAGVKPNVAIDTYDDHRMAMAFSLVSATGVPVIIRDPGCTRKTFPTYFKVFESVAK 510          
BLAST of NO08G02910 vs. NCBI_GenBank
Match: XP_016184176.1 (3-phosphoshikimate 1-carboxyvinyltransferase 2 [Arachis ipaensis])

HSP 1 Score: 526.9 bits (1356), Expect = 6.800e-146
Identity = 286/441 (64.85%), Postives = 332/441 (75.28%), Query Frame = 0
Query:   84 QMTLQPIKTFEGEIELPGSKSISNRILLLAALSQGTTVVDNLLQSEDIEYMLQALTTLGINLENTGD-NQWTVPGRGAPFDT----TSPVDLFLGNAGTAMRPLTAALCAGQGEFS--LDGTPRMRERPISDLTDGLKQLGVDVTCS-DTGCPPVKIKAK-GLPGGSMRISGKISSQYLSALLMAAPLAKGDITIIISDELVSAPYVHMTIKLMQRFGVHVEND-NDRTFTIRAGQTYRSPGQIFTEGDASSASYFLAGAAIAGGTVTVKGCGSESVQGDVYFATVLGMMGAQVDWTPNSITVSRKP-----GVVLKGIDVDCGAIPDAAMTLAIVALFADGPTAIRNVYNWRVKETERMRAIVTELTKLGATVEEGRDFCIVHPLKQLNANVAIDTYDDHRMAMCFSLAACGGVPVVINDPKCVRKTFPDYFERLAVMSK 510
            ++ L+PIK   G I LPGSKS+SNRILLLAALS+GTTVVDNLL SED+ YML AL TLG+ +E+  +  Q  V G G  F T       V LFLGNAGTAMRPLTAA+ A  G  S  LDG PRMRERPI DL  GLKQLG DV CS  T CPPV++  K GLPGG +++SG ISSQYL+ALLMAAPLA GD+ I I D+L+S PYV MT+KLM+RFGVHVE+  N   F +  GQ Y+SPG  F EGDASSASYFLAGAA+ GGT+TV GCG+ S+QGDV FA VL  MGA+V WT NS+TV+  P       VL+G+DV+   +PD AMTLA+VALFA+GPTAIR+V +WRVKETERM AI TEL KLGATVEEG D+C++ P ++LN   AIDTYDDHRMAM FSLAACG VPV INDP C RKTFPDYFE LA  +K
Sbjct:   86 EIVLEPIKEISGTITLPGSKSLSNRILLLAALSEGTTVVDNLLNSEDVHYMLGALRTLGLRVEDDKNAKQAIVEGCGGLFPTGRESKEEVTLFLGNAGTAMRPLTAAVTAAGGNTSYVLDGVPRMRERPIGDLVAGLKQLGADVDCSLGTNCPPVRVVGKGGLPGGKVKLSGSISSQYLTALLMAAPLALGDVEIEIIDKLISVPYVDMTLKLMERFGVHVEHSGNWDRFLVHGGQKYKSPGNAFVEGDASSASYFLAGAAVTGGTITVVGCGTSSLQGDVKFAEVLEKMGAKVTWTENSVTVTGPPRDPSGRKVLQGVDVNMNKMPDVAMTLAVVALFANGPTAIRDVASWRVKETERMIAICTELRKLGATVEEGPDYCVITPPEKLNI-TAIDTYDDHRMAMAFSLAACGDVPVTINDPGCTRKTFPDYFEVLAKYTK 525          
BLAST of NO08G02910 vs. NCBI_GenBank
Match: OIW19009.1 (hypothetical protein TanjilG_20282 [Lupinus angustifolius])

HSP 1 Score: 526.6 bits (1355), Expect = 8.800e-146
Identity = 282/441 (63.95%), Postives = 332/441 (75.28%), Query Frame = 0
Query:   84 QMTLQPIKTFEGEIELPGSKSISNRILLLAALSQGTTVVDNLLQSEDIEYMLQALTTLGINLE-NTGDNQWTVPGRGAPFDT----TSPVDLFLGNAGTAMRPLTAALCA--GQGEFSLDGTPRMRERPISDLTDGLKQLGVDVTCS-DTGCPPVKIKAK-GLPGGSMRISGKISSQYLSALLMAAPLAKGDITIIISDELVSAPYVHMTIKLMQRFGVHVENDND-RTFTIRAGQTYRSPGQIFTEGDASSASYFLAGAAIAGGTVTVKGCGSESVQGDVYFATVLGMMGAQVDWTPNSITVSRKP-----GVVLKGIDVDCGAIPDAAMTLAIVALFADGPTAIRNVYNWRVKETERMRAIVTELTKLGATVEEGRDFCIVHPLKQLNANVAIDTYDDHRMAMCFSLAACGGVPVVINDPKCVRKTFPDYFERLAVMSK 510
            ++ L+PI+   G I LPGSKS+SNRILLLAALS+GTTV+DNLL SED+ YML AL TLG+ +E +    Q  V G G  F T       V+LFLGNAGTAMRPLTAA+ A  G   + LDG PRMRERPI DL  GLKQLG DV CS  T CPPV++  K GLPGG +++SG ISSQYL+ALLMAAPLA GD+ I I D+L+S PYV MT+KLM+RFGV VE+ ND   F +R GQ Y+SPG  F EGDASSASYFLAGAA+ GGT+TV+GCG+ S+QGDV FA VL  MGA+V WT NS+TV+  P       VLKG+DV+   +PD AMTLA+VALFA+GPTAIR+V +WRVKETERM AI TELTKLGATVEEG D+C++ P ++L     IDTYDDHRMAM FSLAACG VPV INDP C RKTFPDYF+ L   +K
Sbjct:   27 EIVLEPIREISGTITLPGSKSLSNRILLLAALSEGTTVLDNLLNSEDVHYMLGALRTLGLRVEDDKTTKQAIVEGCGGLFPTGKESKDEVNLFLGNAGTAMRPLTAAVTAAGGNASYILDGVPRMRERPIGDLVAGLKQLGADVDCSLGTNCPPVRVNGKGGLPGGKVKLSGSISSQYLTALLMAAPLALGDVEIEIIDKLISVPYVEMTLKLMERFGVSVEHSNDWDRFLVRGGQKYKSPGNAFVEGDASSASYFLAGAAVTGGTITVQGCGTSSLQGDVKFAEVLEKMGAKVSWTENSVTVTGPPRDPSGRKVLKGVDVNMNKMPDVAMTLAVVALFANGPTAIRDVASWRVKETERMIAICTELTKLGATVEEGPDYCLITPPEKLKI-TTIDTYDDHRMAMAFSLAACGDVPVTINDPGCTRKTFPDYFQVLERFTK 466          
BLAST of NO08G02910 vs. NCBI_GenBank
Match: XP_019447186.1 (PREDICTED: 3-phosphoshikimate 1-carboxyvinyltransferase 2 [Lupinus angustifolius])

HSP 1 Score: 526.6 bits (1355), Expect = 8.800e-146
Identity = 282/441 (63.95%), Postives = 332/441 (75.28%), Query Frame = 0
Query:   84 QMTLQPIKTFEGEIELPGSKSISNRILLLAALSQGTTVVDNLLQSEDIEYMLQALTTLGINLE-NTGDNQWTVPGRGAPFDT----TSPVDLFLGNAGTAMRPLTAALCA--GQGEFSLDGTPRMRERPISDLTDGLKQLGVDVTCS-DTGCPPVKIKAK-GLPGGSMRISGKISSQYLSALLMAAPLAKGDITIIISDELVSAPYVHMTIKLMQRFGVHVENDND-RTFTIRAGQTYRSPGQIFTEGDASSASYFLAGAAIAGGTVTVKGCGSESVQGDVYFATVLGMMGAQVDWTPNSITVSRKP-----GVVLKGIDVDCGAIPDAAMTLAIVALFADGPTAIRNVYNWRVKETERMRAIVTELTKLGATVEEGRDFCIVHPLKQLNANVAIDTYDDHRMAMCFSLAACGGVPVVINDPKCVRKTFPDYFERLAVMSK 510
            ++ L+PI+   G I LPGSKS+SNRILLLAALS+GTTV+DNLL SED+ YML AL TLG+ +E +    Q  V G G  F T       V+LFLGNAGTAMRPLTAA+ A  G   + LDG PRMRERPI DL  GLKQLG DV CS  T CPPV++  K GLPGG +++SG ISSQYL+ALLMAAPLA GD+ I I D+L+S PYV MT+KLM+RFGV VE+ ND   F +R GQ Y+SPG  F EGDASSASYFLAGAA+ GGT+TV+GCG+ S+QGDV FA VL  MGA+V WT NS+TV+  P       VLKG+DV+   +PD AMTLA+VALFA+GPTAIR+V +WRVKETERM AI TELTKLGATVEEG D+C++ P ++L     IDTYDDHRMAM FSLAACG VPV INDP C RKTFPDYF+ L   +K
Sbjct:   81 EIVLEPIREISGTITLPGSKSLSNRILLLAALSEGTTVLDNLLNSEDVHYMLGALRTLGLRVEDDKTTKQAIVEGCGGLFPTGKESKDEVNLFLGNAGTAMRPLTAAVTAAGGNASYILDGVPRMRERPIGDLVAGLKQLGADVDCSLGTNCPPVRVNGKGGLPGGKVKLSGSISSQYLTALLMAAPLALGDVEIEIIDKLISVPYVEMTLKLMERFGVSVEHSNDWDRFLVRGGQKYKSPGNAFVEGDASSASYFLAGAAVTGGTITVQGCGTSSLQGDVKFAEVLEKMGAKVSWTENSVTVTGPPRDPSGRKVLKGVDVNMNKMPDVAMTLAVVALFANGPTAIRDVASWRVKETERMIAICTELTKLGATVEEGPDYCLITPPEKLKI-TTIDTYDDHRMAMAFSLAACGDVPVTINDPGCTRKTFPDYFQVLERFTK 520          
The following BLAST results are available for this feature:
BLAST of NO08G02910 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
XP_019151672.16.100e-14761.91PREDICTED: 3-phosphoshikimate 1-carboxyvinyltransf... [more]
XP_010098925.11.000e-14658.963-phosphoshikimate 1-carboxyvinyltransferase 2 [Mo... [more]
XP_002946713.11.800e-14662.86hypothetical protein VOLCADRAFT_79287 [Volvox cart... [more]
AFY09699.13.000e-14658.59chloroplast 5-enolpyruvylshikimate 3-phosphate syn... [more]
XP_019464186.15.200e-14664.32PREDICTED: 3-phosphoshikimate 1-carboxyvinyltransf... [more]
XP_021677878.15.200e-14658.303-phosphoshikimate 1-carboxyvinyltransferase 2-lik... [more]
KXZ56795.16.800e-14663.17hypothetical protein GPECTOR_1g716 [Gonium pectora... [more]
XP_016184176.16.800e-14664.853-phosphoshikimate 1-carboxyvinyltransferase 2 [Ar... [more]
OIW19009.18.800e-14663.95hypothetical protein TanjilG_20282 [Lupinus angust... [more]
XP_019447186.18.800e-14663.95PREDICTED: 3-phosphoshikimate 1-carboxyvinyltransf... [more]

Pages

back to top
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL109nonsL109Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
nonsL108nonsL108Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR083ncniR083Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR141ngnoR141Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR140ngnoR140Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK008744NSK008744Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO08G02910.1NO08G02910.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|629019gene_3623Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100001g192gene3781Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO08G02910.1NO08G02910.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO08G02910 ID=NO08G02910|Name=NO08G02910|organism=Nannochloropsis oceanica|type=gene|length=2347bp
TGGTTAGGATTGGGCGGGTGCTGTAAATATGCGTGAGAGGTGGAATTGCA
GATGGAGATAAGTGCTGGGCGTGGAAGTGGCTTCCAATGGGATGCGGACT
GGAAGGTAGAAAGAAGGGGGAGGAGGGCGAGAGGAAGAGGAGGGAGGTCG
CTCAGTGGCGGACTGAGGACGACGCCAAAAGAACATGATCTCGCAGCCTG
TCAACCATCTCAGGGCTTGGATACGGTGACAGTCTTATTGCTGCTCTTGT
CTGTACAGTGATAGGAAGTAAGATAATCGTAATATCGAGGAGGGTTGCCT
GCATCAAACTGTGTCCATACGCATAGGACTCCTCGGAGCAACGGCAGCAT
GCAACACTTCACTTAAACCTCAAGCCCAGCGCGATTCTCACTCATCCAAT
GAACCCTCCACATGACAGGCACACGCAAGAGGCCACGCCAATACCTTTCG
TCGTTGTCACGACACCCCTGGTGCTGCACAAACCGCGTCCATCCGCAGCG
AGCTTAGCCTCCTGCCTCCCCCTACGTCCTAACCCCCCACCGCCGTACGA
TAATGAGGCGCATCACCACTAGCTCCGCCAGCCGGCAGAACGCACACAGT
AAACCATACCCTCTCCCAGTCACTCTCACTATAGTACTACTTGCTGCTGC
CTTGCCCACGACTACCCTTTCTTTCGTCCTACCCATCCTCCCCTCCTCCC
CTCCTTGGGGCGGCTTAACTACAACTATCACTACCACCTCAAGGATACAT
CTACCACAACCCCTCGCAGCTGCAGGAGGGACCACTAACGAGAGGATGGA
GCAGATGACCTTGCAACCCATAAAGACTTTCGAGGGAGAAATTGAGCTCC
CCGGCAGCAAGTCCATCAGCAACCGCATCCTTCTCCTCGCAGCGCTGAGC
CAAGGCACCACTGTTGTCGACAACCTGCTCCAAAGCGAAGACATCGAGTA
CATGCTTCAAGCCCTCACCACATTAGGAATTAATCTCGAGAACACCGGCG
ATAACCAATGGACCGTCCCCGGCCGCGGGGCGCCCTTCGATACCACCTCC
CCTGTAGATCTCTTTCTCGGCAATGCCGGCACGGCCATGCGTCCCTTAAC
TGCCGCCCTCTGCGCTGGCCAAGGAGAATTTAGCCTCGACGGGACCCCGC
GTATGCGCGAACGCCCCATTTCCGACTTGACCGATGGTTTAAAACAACTT
GGGGTCGACGTGACCTGTTCCGACACTGGTTGTCCGCCCGTCAAAATCAA
GGCTAAAGGCCTCCCTGGTGGAAGCATGCGTATTTCAGGCAAGATCTCAA
GCCAGTACCTTTCAGCCCTCCTCATGGCTGCGCCGCTCGCCAAGGGAGAT
ATCACGATCATAATCTCTGATGAGCTGGTTTCTGCCCCTTATGTGCATAT
GACTATCAAATTGATGCAACGCTTTGGGGTCCATGTGGAGAACGACAATG
ACCGCACTTTTACTATTCGTGCCGGGCAAACCTACCGTTCACCAGGTCAG
ATATTCACAGAAGGCGACGCATCCTCGGCATCTTATTTCCTGGCAGGCGC
TGCAATAGCTGGGGGGACAGTGACCGTGAAGGGGTGTGGGAGCGAGAGTG
TGCAGGGCGACGTGTATTTTGCCACGGTGCTGGGGATGATGGGCGCGCAG
GTTGACTGGACCCCGAACTCGATCACAGTTTCGAGGAAACCTGGTGTGGT
GCTTAAGGGGATTGATGTGGACTGCGGAGCCATCCCGGATGCGGCCATGA
CGTTGGCAATCGTGGCGCTGTTTGCAGACGGACCGACGGCGATCAGgtac
atggagggggggaaggaggaaggaaagggattattatgtgggcgacactg
tcgaagatcctaagttttcccttttccctgttccttccctctttcatctc
tctttctccttctccctccctcgctcctttccccaaccccagAAATGTCT
ACAACTGGCGCGTTAAGGAAACGGAGCGCATGAGGGCCATCGTCACAGAG
CTCACCAAACTCGGCGCCACTGTCGAGGAGGGCCGGGACTTCTGCATCGT
CCATCCACTCAAGCAGTTGAATGCCAACGTGGCTATCGATACCTATGACG
ACCACCGCATGGCCATGTGCTTTTCCCTCGCCGCCTGTGGAGGAGTCCCC
GTGGTGATAAACGACCCCAAGTGCGTTAGGAAGACGTTTCCGGATTACTT
TGAACGGTTGGCGGTTATGAGTAAGTAGGAAGAGAGGAGATAAGATAAGA
AAGGGATGAAAAGCACCCGAGTCTGAAGTGAAGGCCTAGGAGATCCAAAC
AAAAAAGGAACAACATGAACCACGAGGAAACGGTTGGATGGGATGAA
back to top

protein sequence of NO08G02910.1

>NO08G02910.1-protein ID=NO08G02910.1-protein|Name=NO08G02910.1|organism=Nannochloropsis oceanica|type=polypeptide|length=510bp
MRRITTSSASRQNAHSKPYPLPVTLTIVLLAAALPTTTLSFVLPILPSSP
PWGGLTTTITTTSRIHLPQPLAAAGGTTNERMEQMTLQPIKTFEGEIELP
GSKSISNRILLLAALSQGTTVVDNLLQSEDIEYMLQALTTLGINLENTGD
NQWTVPGRGAPFDTTSPVDLFLGNAGTAMRPLTAALCAGQGEFSLDGTPR
MRERPISDLTDGLKQLGVDVTCSDTGCPPVKIKAKGLPGGSMRISGKISS
QYLSALLMAAPLAKGDITIIISDELVSAPYVHMTIKLMQRFGVHVENDND
RTFTIRAGQTYRSPGQIFTEGDASSASYFLAGAAIAGGTVTVKGCGSESV
QGDVYFATVLGMMGAQVDWTPNSITVSRKPGVVLKGIDVDCGAIPDAAMT
LAIVALFADGPTAIRNVYNWRVKETERMRAIVTELTKLGATVEEGRDFCI
VHPLKQLNANVAIDTYDDHRMAMCFSLAACGGVPVVINDPKCVRKTFPDY
FERLAVMSK*
back to top
Synonyms
Publications