NO08G02910, NO08G02910 (gene) Nannochloropsis oceanica

Overview
NameNO08G02910
Unique NameNO08G02910
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2347
Alignment locationchr8:814877..817223 -

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Properties
Property NameValue
Description3-phosphoshikimate 1-carboxyvinyltransferase
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr8genomechr8:814877..817223 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
PXD0160542021-01-14
PXD0166992021-01-08
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
PXD0100302020-03-16
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
GO:0016765transferase activity, transferring alkyl or aryl (other than methyl) groups
GO:0016740transferase activity
Vocabulary: INTERPRO
TermDefinition
IPR013792RNA3'P_cycl/enolpyr_Trfase_a/b
IPR001986Enolpyruvate_Tfrase_dom
Vocabulary: Biological Process
TermDefinition
GO:0009987cellular process
GO:0009058biosynthetic process
Homology
BLAST of NO08G02910 vs. NCBI_GenBank
Match: CBN78624.1 (3-Phosphoshikimate 1-Carboxyvinyltransferase [Ectocarpus siliculosus])

HSP 1 Score: 601.3 bits (1549), Expect = 2.800e-168
Identity = 299/431 (69.37%), Postives = 349/431 (80.97%), Query Frame = 0
Query:   75 GGTTNERMEQMTLQPIKTFEGEIELPGSKSISNRILLLAALSQGTTVVDNLLQSEDIEYMLQALTTLGINLENTGDNQWT-VPGRGAPFDTTSPVDLFLGNAGTAMRPLTAALCAGQGEFSLDGTPRMRERPISDLTDGLKQLGVDVTCSDTGCPPVKIKAKGLPGGSMRISGKISSQYLSALLMAAPLAKGDITIIISDELVSAPYVHMTIKLMQRFGVHVENDNDRTFTIRAGQTYRSPGQIFTEGDASSASYFLAGAAIAGGTVTVKGCGSESVQGDVYFATVLGMMGAQVDWTPNSITVSRKPGVVLKGIDVDCGAIPDAAMTLAIVALFADGPTAIRNVYNWRVKETERMRAIVTELTKLGATVEEGRDFCIVHPLKQLNANVAIDTYDDHRMAMCFSLAACGGVPVVINDPKCVRKTFPDYFERL 505
            G T   R+E +T+ PI    GE+ELPGSKS+SNR+LLL+AL++GTT V+NLL SEDI+YML AL TL +++++  + +   V G   PF+ + P +LFLGNAGTAMRPLTA +CAG+GEF +DGTPRMRERPI DL DGLKQLGVDV+CSDTGCPPV IKA GL GG+ R+SGKISSQYLSALLMAAPL+ G++ I I+DELVSAPYVHMTIKLM +FGV V+N+ D  FTI+ GQ Y SPG I  EGDASSASYFL GAAI GG VTV+GCG +SVQGDV FA VL  MGA + W  N++TVSR     L+G+DVDCG IPDAAMTLA++ALFA+GPTAIRNVYNWRVKETERM+AIVTEL KLGA VEEGRD+CIV P K +   VAIDTYDDHRMAMCFSLAAC GVPV INDP+C  KTFP YF+ L
Sbjct:   77 GATAATRLESLTVSPISLISGEVELPGSKSLSNRVLLLSALAEGTTKVENLLDSEDIQYMLGALKTLKVSVDSDLEAKTVEVVGNAGPFEVSDPTELFLGNAGTAMRPLTAVVCAGKGEFVMDGTPRMRERPIVDLVDGLKQLGVDVSCSDTGCPPVNIKAAGLNGGTTRVSGKISSQYLSALLMAAPLSSGEVVIEITDELVSAPYVHMTIKLMDKFGVKVKNEGDMRFTIKDGQKYVSPGTIAVEGDASSASYFLGGAAITGGPVTVRGCGRDSVQGDVRFAEVLEKMGATLTWEANAMTVSRDLETPLRGVDVDCGEIPDAAMTLAVIALFAEGPTAIRNVYNWRVKETERMKAIVTELGKLGAEVEEGRDYCIVTPPKAVKPRVAIDTYDDHRMAMCFSLAACAGVPVTINDPECTAKTFPTYFKVL 507          
BLAST of NO08G02910 vs. NCBI_GenBank
Match: XP_005711541.1 (3-phosphoshikimate 1-carboxyvinyltransferase [Chondrus crispus] >CDF41247.1 3-phosphoshikimate 1-carboxyvinyltransferase [Chondrus crispus])

HSP 1 Score: 575.1 bits (1481), Expect = 2.200e-160
Identity = 292/437 (66.82%), Postives = 342/437 (78.26%), Query Frame = 0
Query:   77 TTNERMEQMTLQPIKTFEGEIELPGSKSISNRILLLAALSQGTTVVDNLLQSEDIEYMLQALTTLGINLENTGDNQWTVPGRGAPFDTTSPVDLFLGNAGTAMRPLTAALCA--GQGEFSLDGTPRMRERPISDLTDGLKQLGVDVTCSDTGCPPVKIK--AKGLPGGSMRISGKISSQYLSALLMAAPLAKGDITIIISDELVSAPYVHMTIKLMQRFGVHVENDNDRT-FTIRAGQTYRSPGQIFTEGDASSASYFLAGAAIAGGTVTVKGCGSESVQGDVYFATVLGMMGAQVDWTPNSITVSRKPGVVLKGIDVDCGAIPDAAMTLAIVALFADGPTAIRNVYNWRVKETERMRAIVTELTKLGATVEEGRDFCIVHPLKQLNANVAIDTYDDHRMAMCFSLAACGGVPVVINDPKCVRKTFPDYFERLAVMS 509
            T +  +E + L PI +  G I+LPGSKS+SNR+LLLAAL++G T + NLL S+DI YM +AL  L ++ E T D  + V G    +   +  +LFLGNAGTAMRPLTAALC   G+GEF LDGTPRMRERPI+DL D L+QLG DV CSDTGCPPV+I+    GLPGG  R+SGKISSQYLSALL+AAP+A  D+TI I+DELVS PYV MTI LM +FGV V+ D   T F ++ GQ Y SPG+ F EGDASSASYFLAGAAI GG VTV+GCGSESVQGDV FA ++G+MGA+V+W  NSITVSR+PG  LKG+DVDC  IPDAAM+LA  ALFA+GPTAIRNVYNWRVKETERM+AIVTEL KLGA VEEGRD+C++HP K +  NV IDTYDDHRMAM FSL ACGGVPVVI DPKC  KTFP YF+ LA M+
Sbjct:   43 TASTPVESLPLSPIASLRGVIDLPGSKSLSNRVLLLAALARGRTTIRNLLVSDDIRYMQEALKALSVSYETTADGAFVVDGCAGAWPVQT-AELFLGNAGTAMRPLTAALCVAKGKGEFVLDGTPRMRERPINDLIDALQQLGADVECSDTGCPPVRIRNTEAGLPGGVARVSGKISSQYLSALLIAAPMANEDVTIRITDELVSVPYVKMTINLMNKFGVDVQVDEGNTEFVVKKGQQYVSPGEYFVEGDASSASYFLAGAAITGGPVTVRGCGSESVQGDVDFARIMGLMGAKVEWEANSITVSREPGTKLKGVDVDCVDIPDAAMSLATTALFAEGPTAIRNVYNWRVKETERMKAIVTELRKLGAEVEEGRDYCVIHPPKTIRENVPIDTYDDHRMAMAFSLVACGGVPVVIRDPKCTTKTFPTYFDELARMT 478          
BLAST of NO08G02910 vs. NCBI_GenBank
Match: GAX19868.1 (3-phosphoshikimate 1-carboxyvinyltransferase [Fistulifera solaris])

HSP 1 Score: 561.2 bits (1445), Expect = 3.200e-156
Identity = 290/445 (65.17%), Postives = 344/445 (77.30%), Query Frame = 0
Query:   70 PLAAAGGTTNERMEQMTLQPIKTFEGEIELPGSKSISNRILLLAALSQGTTVVDNLLQSEDIEYMLQALTTLGINLENTGDNQWTVPGRGAPFDTTSP---VDLFLGNAGTAMRPLTAALCAGQGEFSLDGTPRMRERPISDLTDGLKQLGVDVTC-SDTGCPPVKIKAKGLPGGSMRISGKISSQYLSALLMAAPLAKGDITIIISDELVSAPYVHMTIKLMQRFGVHVENDND----RTFTIRAGQTYRSPGQIFTEGDASSASYFLAGAAIAGGTVTVKGCGSESVQGDVYFATVLGMMGAQVDWTPNSITVSRKPGVVLKGIDVDCGAIPDAAMTLAIVALFADGPTAIRNVYNWRVKETERMRAIVTELTKLGATVEEGRDFCIVHPL--KQLNANVAIDTYDDHRMAMCFSLAACGGVPVVINDPKCVRKTFPDYFERL 505
            PL+A   T  + +E +T+ PIK+ +G + LPGSKS+SNR LLLAALS+GTT VDNLL S+DI YMLQAL TL + +E    +  TV G+  P ++ +P    +LFLGNAGTAMRPL AALC GQG+F LDG PRMRERPI+DL DGL+QLG DV C  +TGCPPV I+AKGL  G   ISGK+SSQ+LS+LLMAAP   GD+TI I DEL+SAPYV +TI LM++FGV+V+ D D     +FTI + + Y SPG I  EGDASSASYF+AGAAI GGTVTV+GCGS+SVQGDV FA V+  MGA V W P SITV+R P V LKG+DVDCG IPDAAMTLA+ ALFA+GPT IRNVY+WR+KETERM+AIV E TKLGATVEE  D+CI+HP    ++N NV I+TYDDHRMAM FSLAACGGV V+INDP C  KTFP YFE L
Sbjct:   37 PLSA---TKTDVVETLTVAPIKSLDGTVTLPGSKSLSNRCLLLAALSEGTTRVDNLLDSDDIRYMLQALDTLQVPVEKHSADSVTVTGQAGPINSPTPDQTCELFLGNAGTAMRPLAAALCMGQGQFILDGVPRMRERPIADLIDGLQQLGADVECVKETGCPPVTIRAKGLQAGKASISGKMSSQFLSSLLMAAPAVDGDVTISIKDELISAPYVALTIGLMKKFGVNVQIDGDIEETPSFTIASTEKYVSPGSILVEGDASSASYFIAGAAITGGTVTVRGCGSDSVQGDVAFANVMEQMGATVTWAPESITVTRDPSVRLKGVDVDCGKIPDAAMTLAVAALFAEGPTTIRNVYSWRLKETERMKAIVAECTKLGATVEEFTDYCIIHPPAGNKINDNVLIETYDDHRMAMTFSLAACGGVNVIINDPGCTAKTFPTYFEML 478          
BLAST of NO08G02910 vs. NCBI_GenBank
Match: GAX15231.1 (3-phosphoshikimate 1-carboxyvinyltransferase [Fistulifera solaris])

HSP 1 Score: 560.1 bits (1442), Expect = 7.200e-156
Identity = 286/432 (66.20%), Postives = 337/432 (78.01%), Query Frame = 0
Query:   83 EQMTLQPIKTFEGEIELPGSKSISNRILLLAALSQGTTVVDNLLQSEDIEYMLQALTTLGINLENTGDNQWTVPGRGAPFDTTSP---VDLFLGNAGTAMRPLTAALCAGQGEFSLDGTPRMRERPISDLTDGLKQLGVDVTC-SDTGCPPVKIKAKGLPGGSMRISGKISSQYLSALLMAAPLAKGDITIIISDELVSAPYVHMTIKLMQRFGVHVENDNDR----TFTIRAGQTYRSPGQIFTEGDASSASYFLAGAAIAGGTVTVKGCGSESVQGDVYFATVLGMMGAQVDWTPNSITVSRKPGVVLKGIDVDCGAIPDAAMTLAIVALFADGPTAIRNVYNWRVKETERMRAIVTELTKLGATVEEGRDFCIVHPL--KQLNANVAIDTYDDHRMAMCFSLAACGGVPVVINDPKCVRKTFPDYFERL 505
            E +T+ PIK+ +G + LPGSKS+SNR LLLAALS+GTT VDNLL S+DI YMLQAL TL + +E    +  TV G+  P ++ +P    +LFLGNAGTAMRPL AALC GQG+F LDG PRMRERPI+DL DGL+QLG DV C  +TGCPPV I+AKGL GG   ISGK+SSQ+LS+LLMAAP   GD+TI I DEL+SAPYV +TI LM++FGV+V+ D D     +FTI + + Y SPG I  EGDASSASYF+AGAAI GGTVTV+GCGS+SVQGDV FA V+  MGA V W P SITV+R   V LKG+DVDCG IPDAAMTLA+ ALFA+GPT IRNVY+WR+KETERM+AIV E TKLGATVEE  D+CI+HP    ++N NV I+TYDDHRMAM FSLAACGGV V+INDP C  KTFP YFE L
Sbjct:   47 ETLTVAPIKSLDGTVTLPGSKSLSNRCLLLAALSEGTTRVDNLLDSDDIRYMLQALDTLQVPVEKHSSDSVTVTGQAGPINSPTPDQTCELFLGNAGTAMRPLAAALCMGQGQFVLDGVPRMRERPIADLIDGLQQLGADVECVKETGCPPVTIRAKGLQGGKASISGKMSSQFLSSLLMAAPAVDGDVTISIKDELISAPYVALTIGLMKKFGVNVQIDGDMEGTPSFTIASTEKYVSPGSILVEGDASSASYFIAGAAITGGTVTVRGCGSDSVQGDVAFANVMEQMGATVTWAPESITVTRDASVRLKGVDVDCGKIPDAAMTLAVAALFAEGPTTIRNVYSWRLKETERMKAIVAECTKLGATVEEFNDYCIIHPPAGNKINDNVLIETYDDHRMAMTFSLAACGGVNVIINDPGCTAKTFPTYFEML 478          
BLAST of NO08G02910 vs. NCBI_GenBank
Match: EWM26612.1 (5-enolpyruvylshikimate-3-phosphate synthase [Nannochloropsis gaditana] >EWM26613.1 5-enolpyruvylshikimate-3-phosphate synthase [Nannochloropsis gaditana])

HSP 1 Score: 556.2 bits (1432), Expect = 1.000e-154
Identity = 286/384 (74.48%), Postives = 322/384 (83.85%), Query Frame = 0
Query:   36 TTTLSFVLPI----LPSSPPWGGLTTTITTTSRIHLPQPLAAAGGTTNERMEQMTLQPIKTFEGEIELPGSKSISNRILLLAALSQGTTVVDNLLQSEDIEYMLQALTTLGINLENTGDNQWTVPGRGAPFDTTSPVDLFLGNAGTAMRPLTAALCAGQGEFSLDGTPRMRERPISDLTDGLKQLGVDVTCSDTGCPPVKIKAKGLPGGSMRISGKISSQYLSALLMAAPLAKGDITIIISDELVSAPYVHMTIKLMQRFGVHVENDNDRTFTIRAGQTYRSPGQIFTEGDASSASYFLAGAAIAGGTVTVKGCGSESVQGDVYFATVLGMMGAQVDWTPNSITVSRKPGVVLKGIDVDCGAIPDAAMTLAIVALFADGPTAIR 416
            +T+ +F+ P     LP +   G        T  +H   PL AAG    + MEQ+ +QPI TFEGEIELPGSKSISNRILLL+ALSQGTTVVDNLLQSEDIEYM+QAL  LGI LE TG+NQWTV GRGA FD+  P++L+LGNAGTAMRPLTAALCAG G+F+LDGTPRMRERPISDL DGL+QLGVD+ CS TGCPPV I+A+GL GG +RISGKISSQYLSALLMAAPLA+GD+ I I+DELVSAPYVHMT+KLM RFGV V+N+ D  FT+R GQTYRSPGQIFTEGDASSASYFLAGAAI GG VTV+GCGSESVQGDVYFATVLG MGA V+WTP SI V+R+PGV LKGIDVDCGAIPDAAMTLA+VALFA+GPTAIR
Sbjct:   31 STSQAFLSPARSYSLPRASALGFRAPLAPATESLHFVTPLNAAGA---QEMEQLVVQPISTFEGEIELPGSKSISNRILLLSALSQGTTVVDNLLQSEDIEYMIQALLDLGIKLEKTGENQWTVQGRGAAFDSDKPLELYLGNAGTAMRPLTAALCAGHGDFTLDGTPRMRERPISDLVDGLQQLGVDLACSPTGCPPVTIRARGLSGGIVRISGKISSQYLSALLMAAPLARGDVRIEITDELVSAPYVHMTVKLMARFGVEVDNEGDGVFTVRGGQTYRSPGQIFTEGDASSASYFLAGAAITGGRVTVRGCGSESVQGDVYFATVLGEMGATVEWTPTSIQVTRQPGVPLKGIDVDCGAIPDAAMTLAVVALFAEGPTAIR 411          
BLAST of NO08G02910 vs. NCBI_GenBank
Match: XP_002288542.1 (predicted protein [Thalassiosira pseudonana CCMP1335] >EED93978.1 predicted protein [Thalassiosira pseudonana CCMP1335])

HSP 1 Score: 552.0 bits (1421), Expect = 2.000e-153
Identity = 292/479 (60.96%), Postives = 353/479 (73.70%), Query Frame = 0
Query:   38 TLSFVLPILPSSPPWGGLTTTITTTSRIHLPQPLAAAGGTTNERMEQMTLQPIKTFEGEIELPGSKSISNRILLLAALSQGTTVVDNLLQSEDIEYMLQALTTLGINLENTGDNQW--TVPGRGAPFDTTSP---VDLFLGNAGTAMRPLTAALCAGQGEFSLDGTPRMRERPISDLTDGLKQLGVDVTC-SDTGCPPVKIKAKGLPGGSMRISGKISSQYLSALLMAAPLAKGDITIIISDELVSAPYVHMTIKLMQRFGVHV--ENDNDRT--FTIRAGQTYRSPGQIFTEGDASSASYFLAGAAIAGGTVTVKGCGSESVQGDVYFATVLGMMGAQVDWTPNSITVSRKPGVVLKGIDVDCGAIPDAAMTLAIVALFADGPTAIRNVYNWRVKETERMRAIVTELTKLGATVEEGRDFCIVHPLK--QLNANVAIDTYDDHRMAMCFSLAACGGVPVVINDPKCVRKTFPDYFERL 505
            TLS  +  +  +P      + + ++++ H    L+A     +    Q+T+ PI T EG + LPGSKS+SNR LLLAALS G T V+NLL+S+DI YML+AL TL + +E    ++   TV G+  P ++ +P   V+LFLGNAGTAMRPL AALC G+G+F LDG PRMRERPISDL DGLKQLG DV+C  +TGCPPV I A GL GG   ISGK+SSQ+LS+LLMA+P   GD+TI I DEL+SAPYV +TI LM++FGV+V  E D D T  F I A + Y SP  I  EGDASSASYFLAGAAI GGTVTV+GCGS+SVQGDV FA V+  MGA V W P SIT++R P   LKG+DVDCG IPDAAMTLA+ ALFA+GPT IRNVY+WR+KETERM+AIV E TKLGATVEE  D+CI+HP K  ++N NV I+TYDDHRMAM FSLAACGGV V+I+DP C  KTFP YFE L
Sbjct:    3 TLSAAVTAVLFAPQMTTSFSVLPSSTQCHATSSLSAMTFDVDAEKNQLTVTPIATLEGTVTLPGSKSLSNRCLLLAALSSGNTRVENLLESDDIRYMLEALDTLKVPVERDAIDKTSVTVTGQAGPINSPTPEEVVELFLGNAGTAMRPLAAALCMGEGKFVLDGVPRMRERPISDLIDGLKQLGADVSCVEETGCPPVTINASGLKGGKASISGKMSSQFLSSLLMASPAVDGDVTISIKDELISAPYVSLTIGLMKKFGVNVKIEGDMDGTPSFIIGADEKYTSPESILVEGDASSASYFLAGAAITGGTVTVRGCGSDSVQGDVAFANVMEQMGATVTWAPESITITRDPNTKLKGVDVDCGKIPDAAMTLAVAALFAEGPTTIRNVYSWRLKETERMKAIVAECTKLGATVEEFEDYCIIHPPKDNKVNENVVIETYDDHRMAMTFSLAACGGVNVIIHDPGCTGKTFPTYFEML 481          
BLAST of NO08G02910 vs. NCBI_GenBank
Match: OEU15135.1 (3-phosphoshikimate 1-carboxyvinyltransferase [Fragilariopsis cylindrus CCMP1102])

HSP 1 Score: 550.8 bits (1418), Expect = 4.400e-153
Identity = 282/433 (65.13%), Postives = 333/433 (76.91%), Query Frame = 0
Query:   82 MEQMTLQPIKTFEGEIELPGSKSISNRILLLAALSQGTTVVDNLLQSEDIEYMLQALTTLGINLENTGDNQWTVPGRGAPFDTTSP---VDLFLGNAGTAMRPLTAALCAGQGEFSLDGTPRMRERPISDLTDGLKQLGVDVTC-SDTGCPPVKIKAKGLPGGSMRISGKISSQYLSALLMAAPLAKGDITIIISDELVSAPYVHMTIKLMQRFGVHV----ENDNDRTFTIRAGQTYRSPGQIFTEGDASSASYFLAGAAIAGGTVTVKGCGSESVQGDVYFATVLGMMGAQVDWTPNSITVSRKPGVVLKGIDVDCGAIPDAAMTLAIVALFADGPTAIRNVYNWRVKETERMRAIVTELTKLGATVEEGRDFCIVHPLK--QLNANVAIDTYDDHRMAMCFSLAACGGVPVVINDPKCVRKTFPDYFERL 505
            +E +T+ PIK+ +G + LPGSKS+SNR LLLAALS G T VDNLL+S+DI YML AL TL + +E       TV G+  P ++ +    +DLFLGNAGTAMRPL AALC GQG+F LDG PRMRERPI+DL DGL+QLG DVTC  +TGCPPV I A+GL GG   ISGK+SSQ+LS+LLMA+P+  GD+ I I DEL+SAPYV +TI LM++FGV+V      D   +F I   + Y+SP  I  EGDASSASYF+AGAAI GGTVTV+GCGSESVQGDV FA V+  MGA V W P SITV+R P V LKG+DVDCG IPDAAMTLA+ ALFA+GPT IRNVY+WR+KETERM+AIV E TKLGATVEE  D+CI+HP K  ++N NV I+TYDDHRMAM FSLAACGGV V+INDP C  KTFP YFE L
Sbjct:   10 VETLTVTPIKSLDGTVTLPGSKSLSNRCLLLAALSDGDTRVDNLLESDDIRYMLDALDTLKVPVERHSGESVTVTGQSGPINSPNKNEIIDLFLGNAGTAMRPLAAALCMGQGKFVLDGVPRMRERPIADLIDGLQQLGADVTCVEETGCPPVTINAEGLKGGEASISGKMSSQFLSSLLMASPVVDGDVVIKIKDELISAPYVALTIGLMKKFGVNVRIEGSMDEQPSFHIAKSEQYKSPDSILVEGDASSASYFIAGAAITGGTVTVRGCGSESVQGDVAFADVMEKMGATVTWGPESITVTRDPSVQLKGVDVDCGKIPDAAMTLAVAALFAEGPTTIRNVYSWRLKETERMKAIVAECTKLGATVEEFEDYCIIHPPKDNKINNNVLIETYDDHRMAMTFSLAACGGVNVIINDPGCTAKTFPTYFEML 442          
BLAST of NO08G02910 vs. NCBI_GenBank
Match: XP_002178032.1 (3-phosphoshikimate 1-carboxyvinyltransferase [Phaeodactylum tricornutum CCAP 1055/1] >EEC50846.1 3-phosphoshikimate 1-carboxyvinyltransferase [Phaeodactylum tricornutum CCAP 1055/1])

HSP 1 Score: 550.1 bits (1416), Expect = 7.500e-153
Identity = 286/458 (62.45%), Postives = 341/458 (74.45%), Query Frame = 0
Query:   61 TTSRIHLPQPLAAAGGTTNERMEQMTLQPIKTFEGEIELPGSKSISNRILLLAALSQGTTVVDNLLQSEDIEYMLQALTTLGINLENTGDNQWTVPGRGAPFDTTSP---VDLFLGNAGTAMRPLTAALCAGQGEFSLDGTPRMRERPISDLTDGLKQLGVDVTC-SDTGCPPVKIKAKGLPGGSMRISGKISSQYLSALLMAAPLAKGDITIIISDELVSAPYVHMTIKLMQRFGVHVENDNDR----TFTIRAGQTYRSPGQIFTEGDASSASYFLAGAAIAGGTVTVKGCGSESVQGDVYFATVLGMMGAQVDWTPNSITVSRKPGVVLKGIDVDCGAIPDAAMTLAIVALFADGPTAIRNVYNWRVKETERMRAIVTELTKLGATVEEGRDFCIVHPLKQ--LNANVAIDTYDDHRMAMCFSLAACGGVPVVINDPKCVRKTFPDYFERLAVMS 509
            TT R    +    A  TT    E +T++PIK+ +G + LPGSKS+SNR LLLAALS+G T V+NLL S+DI YMLQAL  L + +E   D+  TV G+  P ++ +P    +LFLGNAGTAMRPL AALC G+G+F LDG  RMRERPI+DL DGLKQLG DV+C  ++GCPPV I A GL GG   ISGK+SSQ+LS+LLMAAPL  GDI I I DEL+SAPYV +TI LM++FGV+V+ + D     +F I + + Y SP  I  EGDASSASYF+AGAAI GGTVTV+GCGSESVQGDV FA V+  MGA + W P SITV+R P V LKG+DVDCG IPDAAMTLA+ ALFA+GPT IRNVY+WR+KETERM+AIV E TKLGA VEE  D+CI+HP K   +N NV I+TYDDHRMAM FSL ACGGV V+INDP C  KTFP YFE L  +S
Sbjct:   24 TTDRFGSMRSSPLALATTTGATETLTVKPIKSLDGTVTLPGSKSLSNRCLLLAALSEGKTRVNNLLDSDDICYMLQALEQLAVPVERHSDDSVTVTGKAGPINSPTPEKVCELFLGNAGTAMRPLAAALCMGKGKFLLDGVSRMRERPIADLVDGLKQLGADVSCVEESGCPPVTINANGLQGGCASISGKMSSQFLSSLLMAAPLVDGDINISIKDELISAPYVALTIGLMKKFGVNVDIEGDMDGAPSFKIASSEKYISPKSILVEGDASSASYFVAGAAITGGTVTVRGCGSESVQGDVAFANVMEQMGATITWAPESITVTRDPSVKLKGVDVDCGKIPDAAMTLAVAALFAEGPTTIRNVYSWRLKETERMKAIVAECTKLGAIVEEFEDYCIIHPPKDNIINDNVLIETYDDHRMAMTFSLVACGGVSVIINDPGCTGKTFPTYFEMLESIS 481          
BLAST of NO08G02910 vs. NCBI_GenBank
Match: XP_005647657.1 (3-phosphoshikimate 1-carboxyvinyltransferase [Coccomyxa subellipsoidea C-169] >EIE23113.1 3-phosphoshikimate 1-carboxyvinyltransferase [Coccomyxa subellipsoidea C-169])

HSP 1 Score: 531.2 bits (1367), Expect = 3.600e-147
Identity = 286/429 (66.67%), Postives = 325/429 (75.76%), Query Frame = 0
Query:   82 MEQMTLQPIKTFEGEIELPGSKSISNRILLLAALSQGTTVVDNLLQSEDIEYMLQALTTLGINLENTGD-NQWTVPGRGAPFDTTSPVDLFLGNAGTAMRPLTAAL-CAGQGEFSLDGTPRMRERPISDLTDGLKQLGVDVTCS-DTGCPPVKIKAKGLPGGSMRISGKISSQYLSALLMAAPLAKGD--ITIIISDELVSAPYVHMTIKLMQRFGVHVEN-DNDRTFTIRAGQTYRSPGQIFTEGDASSASYFLAGAAIAGGTVTVKGCGSESVQGDVYFATVLGMMGAQVDWTPNSITVSRKPGVVLKGIDVDCGAIPDAAMTLAIVALFADGPTAIRNVYNWRVKETERMRAIVTELTKLGATVEEGRDFCIVHPLKQLNANVAIDTYDDHRMAMCFSLAACGGVPVVINDPKCVRKTFPDYFERL 505
            MEQ+ LQPI   EG ++LPGSKS+SNRILLLAALS+GTTVV NLL SEDI YM+ AL TLGI LE   + ++  V G    F      +LFLGNAGTAMRPLTAA+  AGQG F LDG  RMRERPI DL DGL QLGV   CS  TGCPPV ++A GLP G++ +SG +SSQYL+ALLMAAPLAKG   ITI I DELVS PYV MT++LM+RFGV VE  D  +   I  GQTY SPG+ F EGDASSASYFLAGA I GGT+TV+GCGS+S+QGDV FA V+G+MGA V W+P SIT++      LKGID DC  IPDAAMTLA+ A+FA+G T IRNVYNWRVKETERM+AIV EL KLGA VEEGRD+C++ P  QL    AIDTYDDHRMAM FSLAACG VPV INDP C RKTFP YF  L
Sbjct:    1 MEQLVLQPITKIEGHVKLPGSKSLSNRILLLAALSKGTTVVKNLLDSEDIRYMVSALKTLGIQLEERWEQSEMVVHGCNGRFPVEG-AELFLGNAGTAMRPLTAAVAAAGQGTFVLDGVARMRERPIQDLVDGLSQLGVQAECSLGTGCPPVTVQADGLPSGTVELSGAVSSQYLTALLMAAPLAKGSEGITIKIRDELVSQPYVDMTVRLMERFGVKVERLDGLQHMHIPPGQTYVSPGESFVEGDASSASYFLAGATITGGTMTVEGCGSDSLQGDVRFAEVMGLMGADVRWSPYSITITGPARGSLKGIDHDCNDIPDAAMTLAVAAIFAEGQTRIRNVYNWRVKETERMKAIVAELGKLGADVEEGRDYCVITPPAQLKP-AAIDTYDDHRMAMAFSLAACGDVPVTINDPGCTRKTFPTYFSVL 427          
BLAST of NO08G02910 vs. NCBI_GenBank
Match: XP_001702942.1 (5-enolpyruvylshikimate-3-phosphate synthase [Chlamydomonas reinhardtii] >PNW85329.1 hypothetical protein CHLRE_03g181300v5 [Chlamydomonas reinhardtii])

HSP 1 Score: 530.4 bits (1365), Expect = 6.100e-147
Identity = 286/441 (64.85%), Postives = 338/441 (76.64%), Query Frame = 0
Query:   78 TNERMEQMTLQPIKTFEGEIELPGSKSISNRILLLAALSQGTTVVDNLLQSEDIEYMLQALTTLGINL-ENTGDNQWTVPGRGAPFDTTSPVDLFLGNAGTAMRPLTAA-LCAGQGEFSLDGTPRMRERPISDLTDGLKQLGVDVTCS-DTGCPPVKIKAKGLPGGSMRISGKISSQYLSALLMAAPL-----AKGD-ITIIISDELVSAPYVHMTIKLMQRFGVHVENDND-RTFTIRAGQTYRSPGQIFTEGDASSASYFLAGAAIAGGTVTVKGCGSESVQGDVYFATVLGMMGAQVDWTPNSITVSRKP--GVVLKGIDVDCGAIPDAAMTLAIVALFADGPTAIRNVYNWRVKETERMRAIVTELTKLGATVEEGRDFCIVHP----LKQLNANVAIDTYDDHRMAMCFSLAACGGVPVVINDPKCVRKTFPDYFE 503
            T E++E++T+QP+K   G ++LPGSKS+SNRILLLAALS+GTT+V NLL S+DI YM+ AL  L + L EN    +  V G G  FD+    +LFLGNAGTAMRPLTAA + AG+G+F LDG  RMRERPI DL DGL QLGVD  C+  TGCPPV++ +KGLP G + +SGK+SSQYL+ALLMAAPL     A GD I III DELVS PYV MT+KLM+RFGV VE  N  +   I AGQTY++PG+ + EGDASSASYFLAGA I GGTVTV+GCGS+S+QGDV FA V+G++GA+V+W+P SIT++     G  + GID DC  IPDAAMTLA+ ALFAD PTAIRNVYNWRVKETERM AIVTEL KLGA VEEGRD+CIV P    +K + ANV IDTYDDHRMAM FSL A  GVPVVI DP C RKTFP YF+
Sbjct:   65 TKEKVEELTIQPVKKIAGTVKLPGSKSLSNRILLLAALSEGTTLVKNLLDSDDIRYMVGALKALNVKLEENWEAGEMVVHGCGGRFDSAG-AELFLGNAGTAMRPLTAAVVAAGRGKFVLDGVARMRERPIEDLVDGLVQLGVDAKCTMGTGCPPVEVNSKGLPTGKVYLSGKVSSQYLTALLMAAPLAVPGGAGGDAIEIIIKDELVSQPYVDMTVKLMERFGVVVERLNGLQHLRIPAGQTYKTPGEAYVEGDASSASYFLAGATITGGTVTVEGCGSDSLQGDVRFAEVMGLLGAKVEWSPYSITITGPSAFGKPITGIDHDCNDIPDAAMTLAVAALFADRPTAIRNVYNWRVKETERMVAIVTELRKLGAEVEEGRDYCIVTPPPGGVKGVKANVGIDTYDDHRMAMAFSLVAAAGVPVVIRDPGCTRKTFPTYFK 504          
The following BLAST results are available for this feature:
BLAST of NO08G02910 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
CBN78624.12.800e-16869.373-Phosphoshikimate 1-Carboxyvinyltransferase [Ecto... [more]
XP_005711541.12.200e-16066.823-phosphoshikimate 1-carboxyvinyltransferase [Chon... [more]
GAX19868.13.200e-15665.173-phosphoshikimate 1-carboxyvinyltransferase [Fist... [more]
GAX15231.17.200e-15666.203-phosphoshikimate 1-carboxyvinyltransferase [Fist... [more]
EWM26612.11.000e-15474.485-enolpyruvylshikimate-3-phosphate synthase [Nanno... [more]
XP_002288542.12.000e-15360.96predicted protein [Thalassiosira pseudonana CCMP13... [more]
OEU15135.14.400e-15365.133-phosphoshikimate 1-carboxyvinyltransferase [Frag... [more]
XP_002178032.17.500e-15362.453-phosphoshikimate 1-carboxyvinyltransferase [Phae... [more]
XP_005647657.13.600e-14766.673-phosphoshikimate 1-carboxyvinyltransferase [Cocc... [more]
XP_001702942.16.100e-14764.855-enolpyruvylshikimate-3-phosphate synthase [Chlam... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL109nonsL109Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
nonsL108nonsL108Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR083ncniR083Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR141ngnoR141Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR140ngnoR140Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK008744NSK008744Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO08G02910.1NO08G02910.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|629019gene_3623Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100001g192gene3781Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO08G02910.1NO08G02910.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO08G02910 ID=NO08G02910|Name=NO08G02910|organism=Nannochloropsis oceanica|type=gene|length=2347bp
TGGTTAGGATTGGGCGGGTGCTGTAAATATGCGTGAGAGGTGGAATTGCA
GATGGAGATAAGTGCTGGGCGTGGAAGTGGCTTCCAATGGGATGCGGACT
GGAAGGTAGAAAGAAGGGGGAGGAGGGCGAGAGGAAGAGGAGGGAGGTCG
CTCAGTGGCGGACTGAGGACGACGCCAAAAGAACATGATCTCGCAGCCTG
TCAACCATCTCAGGGCTTGGATACGGTGACAGTCTTATTGCTGCTCTTGT
CTGTACAGTGATAGGAAGTAAGATAATCGTAATATCGAGGAGGGTTGCCT
GCATCAAACTGTGTCCATACGCATAGGACTCCTCGGAGCAACGGCAGCAT
GCAACACTTCACTTAAACCTCAAGCCCAGCGCGATTCTCACTCATCCAAT
GAACCCTCCACATGACAGGCACACGCAAGAGGCCACGCCAATACCTTTCG
TCGTTGTCACGACACCCCTGGTGCTGCACAAACCGCGTCCATCCGCAGCG
AGCTTAGCCTCCTGCCTCCCCCTACGTCCTAACCCCCCACCGCCGTACGA
TAATGAGGCGCATCACCACTAGCTCCGCCAGCCGGCAGAACGCACACAGT
AAACCATACCCTCTCCCAGTCACTCTCACTATAGTACTACTTGCTGCTGC
CTTGCCCACGACTACCCTTTCTTTCGTCCTACCCATCCTCCCCTCCTCCC
CTCCTTGGGGCGGCTTAACTACAACTATCACTACCACCTCAAGGATACAT
CTACCACAACCCCTCGCAGCTGCAGGAGGGACCACTAACGAGAGGATGGA
GCAGATGACCTTGCAACCCATAAAGACTTTCGAGGGAGAAATTGAGCTCC
CCGGCAGCAAGTCCATCAGCAACCGCATCCTTCTCCTCGCAGCGCTGAGC
CAAGGCACCACTGTTGTCGACAACCTGCTCCAAAGCGAAGACATCGAGTA
CATGCTTCAAGCCCTCACCACATTAGGAATTAATCTCGAGAACACCGGCG
ATAACCAATGGACCGTCCCCGGCCGCGGGGCGCCCTTCGATACCACCTCC
CCTGTAGATCTCTTTCTCGGCAATGCCGGCACGGCCATGCGTCCCTTAAC
TGCCGCCCTCTGCGCTGGCCAAGGAGAATTTAGCCTCGACGGGACCCCGC
GTATGCGCGAACGCCCCATTTCCGACTTGACCGATGGTTTAAAACAACTT
GGGGTCGACGTGACCTGTTCCGACACTGGTTGTCCGCCCGTCAAAATCAA
GGCTAAAGGCCTCCCTGGTGGAAGCATGCGTATTTCAGGCAAGATCTCAA
GCCAGTACCTTTCAGCCCTCCTCATGGCTGCGCCGCTCGCCAAGGGAGAT
ATCACGATCATAATCTCTGATGAGCTGGTTTCTGCCCCTTATGTGCATAT
GACTATCAAATTGATGCAACGCTTTGGGGTCCATGTGGAGAACGACAATG
ACCGCACTTTTACTATTCGTGCCGGGCAAACCTACCGTTCACCAGGTCAG
ATATTCACAGAAGGCGACGCATCCTCGGCATCTTATTTCCTGGCAGGCGC
TGCAATAGCTGGGGGGACAGTGACCGTGAAGGGGTGTGGGAGCGAGAGTG
TGCAGGGCGACGTGTATTTTGCCACGGTGCTGGGGATGATGGGCGCGCAG
GTTGACTGGACCCCGAACTCGATCACAGTTTCGAGGAAACCTGGTGTGGT
GCTTAAGGGGATTGATGTGGACTGCGGAGCCATCCCGGATGCGGCCATGA
CGTTGGCAATCGTGGCGCTGTTTGCAGACGGACCGACGGCGATCAGgtac
atggagggggggaaggaggaaggaaagggattattatgtgggcgacactg
tcgaagatcctaagttttcccttttccctgttccttccctctttcatctc
tctttctccttctccctccctcgctcctttccccaaccccagAAATGTCT
ACAACTGGCGCGTTAAGGAAACGGAGCGCATGAGGGCCATCGTCACAGAG
CTCACCAAACTCGGCGCCACTGTCGAGGAGGGCCGGGACTTCTGCATCGT
CCATCCACTCAAGCAGTTGAATGCCAACGTGGCTATCGATACCTATGACG
ACCACCGCATGGCCATGTGCTTTTCCCTCGCCGCCTGTGGAGGAGTCCCC
GTGGTGATAAACGACCCCAAGTGCGTTAGGAAGACGTTTCCGGATTACTT
TGAACGGTTGGCGGTTATGAGTAAGTAGGAAGAGAGGAGATAAGATAAGA
AAGGGATGAAAAGCACCCGAGTCTGAAGTGAAGGCCTAGGAGATCCAAAC
AAAAAAGGAACAACATGAACCACGAGGAAACGGTTGGATGGGATGAA
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protein sequence of NO08G02910.1

>NO08G02910.1-protein ID=NO08G02910.1-protein|Name=NO08G02910.1|organism=Nannochloropsis oceanica|type=polypeptide|length=510bp
MRRITTSSASRQNAHSKPYPLPVTLTIVLLAAALPTTTLSFVLPILPSSP
PWGGLTTTITTTSRIHLPQPLAAAGGTTNERMEQMTLQPIKTFEGEIELP
GSKSISNRILLLAALSQGTTVVDNLLQSEDIEYMLQALTTLGINLENTGD
NQWTVPGRGAPFDTTSPVDLFLGNAGTAMRPLTAALCAGQGEFSLDGTPR
MRERPISDLTDGLKQLGVDVTCSDTGCPPVKIKAKGLPGGSMRISGKISS
QYLSALLMAAPLAKGDITIIISDELVSAPYVHMTIKLMQRFGVHVENDND
RTFTIRAGQTYRSPGQIFTEGDASSASYFLAGAAIAGGTVTVKGCGSESV
QGDVYFATVLGMMGAQVDWTPNSITVSRKPGVVLKGIDVDCGAIPDAAMT
LAIVALFADGPTAIRNVYNWRVKETERMRAIVTELTKLGATVEEGRDFCI
VHPLKQLNANVAIDTYDDHRMAMCFSLAACGGVPVVINDPKCVRKTFPDY
FERLAVMSK*
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Synonyms
Publications